Pregenerated sensors for AASS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029695Ensembl transcript IDs: ENSMUST00000031707.14, ENSMUST00000149864.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAAATACCATTGCCATGAACTTACTCAAAAGACATCATGCTTCATaGTTTAGCACATCAGCAAGCATGTTTGTCATACCCAAGGTTAAC | + |
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Preference number: 1 (lower is better) Translates to: KNTIAMNLLKRHHAS*FSTSASMFVIPKVN Trigger: GTTAACCTTGGGTATGACAAACATGCTTGCTGATGTGCTAAAGCATGAAGCATGATGTCTTTTGAGTAAGTTCATGGCAATGGTATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| 3UTR-3UTR CCA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTGGGTTCTGTGATGTCTaGATTCTTCTACTCCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: VNDNILVLSGENHSFSVFGFCDV*ILLLQK Trigger: CTTTTGGAGTAGAAGAATCCAGACATCACAGAACCC...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| 3UTR GCA 72 bp | ATTGCCATGAACTTACTCAAAAGACATCATGCTTCATaGTTTAGCACATCAGCAAGCATGTTTGTCATACCC | + |
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Preference number: 3 (lower is better) Translates to: IAMNLLKRHHAS*FSTSASMFVIP Trigger: GGGTATGACAAACATGCTTGCTGATGTGCTAAAGCATGAAGCATGATGTCTTTTGAGTAAGTTCATGGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR GCA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTGAGCCAGAGGCGCCCTaGGCTCCCAGGCGTTCACGT | + |
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Preference number: 4 (lower is better) Translates to: VNDNILVLSGENHSFSVFEPEAP*APRRSR Trigger: ACGTGAACGCCTGGGAGCGCAGGGCGCCTCTGGCTC...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR GCA 90 bp | AAAGGAAATAGTACAACTGCACTTGCTGATAATATGTTCTCGGGGAAAAGGAAGGCATCACGGACAGCCTaGACGGCCTGGCTGCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: KGNSTTALADNMFSGKRKASRTA*TAWLLF Trigger: GAACAGCAGCCAGGCCGTGCAGGCTGTCCGTGATGC...CTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTACTATTTCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR TCA 90 bp | ACATACACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGGGAGTTGTTTCCAGGTaGGAGGGTTGGCCTCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: TYTQKVHRRLIKGFCDVWGVVSR*EGWPQV Trigger: GACCTGAGGCCAACCCTCTCACCTGGAAACAACTCC...CCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGTGTATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | AAAGGAAATAGTACAACTGCACTTGCTGATAATATGTTCTCGGGGAAAAGGAAGGCCATCACTGGCTTGTaGTGGAGGCCTCTGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: KGNSTTALADNMFSGKRKAITGL*WRPLER Trigger: CCTCTCCAGAGGCCTCCACCACAAGCCAGTGATGGC...CTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTACTATTTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | AAAGGAAATAGTACAACTGCACTTGCTGATAATATGTTCTCGGGGAAAAGGAAGTCTGCAGCTTCCAGCTaGGTATTGTCCCCTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: KGNSTTALADNMFSGKRKSAASS*VLSPPS Trigger: GCTGGGAGGGGACAATACCCAGCTGGAAGCTGCAGA...CTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTACTATTTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR TCA 90 bp | ACATACACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGCCCTCCCGTGTCTGCTaGAATGTCACATATTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TYTQKVHRRLIKGFCDVWPSRVC*NVTYCH Trigger: GTGGCAATATGTGACATTTCAGCAGACACGGGAGGG...CCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGTGTATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR TCA 90 bp | ATTGCCATGAACTTACTCAAAAGACATCATGCTTCATGCTTTAGCACATCAGCAACAATGGACTCCGCCTaGGGAACTTGTTCATCCCCC | + |
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Preference number: 4 (lower is better) Translates to: IAMNLLKRHHASCFSTSATMDSA*GTCSSP Trigger: GGGGGATGAACAAGTTCCTCAGGCGGAGTCCATTGT...TGCTGATGTGCTAAAGCATGAAGCATGATGTCTTTTGAGTAAGTTCATGGCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | ACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGATTCTTTGCGTCTCGCACCACTaGGGAGAAGTTCTGGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TQKVHRRLIKGFCDVWILCVSHH*GEVLAF Trigger: GAAAGCCAGAACTTCTCCCCAGTGGTGCGAGACGCA...AAGAATCCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR TCA 90 bp | AAAGGAAATAGTACAACTGCACTTGCTGATAATATGTTCTCGGGGAAAAGGAAGGAATGCCACCAGCCCTaGCATACTCCTTGTCATGGA | + |
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Preference number: 4 (lower is better) Translates to: KGNSTTALADNMFSGKRKECHQP*HTPCHG Trigger: TCCATGACAAGGAGTATGTCAGGGCTGGTGGCATTC...CTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTACTATTTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR GCA 90 bp | ACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGATTCTTTCGGAGGGCAGGGTATaGTTCTCTGTTGATGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: TQKVHRRLIKGFCDVWILSEGRV*FSVDES Trigger: GGACTCATCAACAGAGAAGCATACCCTGCCCTCCGA...AAGAATCCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR GCA 90 bp | ACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGATTCTTAAGCAACATTTTGGCTaGCATGGCTGTCGGCAACCC | + |
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Preference number: 4 (lower is better) Translates to: TQKVHRRLIKGFCDVWILKQHFG*HGCRQP Trigger: GGGTTGCCGACAGCCATGGCAGCCAAAATGTTGCTT...AAGAATCCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTATCACTGGCTTGTGGTaGAGGCCTCTGGAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VNDNILVLSGENHSFSVFITGLW*RPLERQ Trigger: CTGCCTCTCCAGAGGCCTCCACCACAAGCCAGTGAT...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | AAAGGAAATAGTACAACTGCACTTGCTGATAATATGTTCTCGGGGAAAAGGAAGGGATGGCCCGTCTGTTaGAAGGCTGTATCAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: KGNSTTALADNMFSGKRKGWPVC*KAVSRP Trigger: AGGTCTTGATACAGCCTTCCAACAGACGGGCCATCC...CTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTACTATTTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | ACATACACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGTTTCGATGCAGGCTTTaGCCACCACAGGATGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TYTQKVHRRLIKGFCDVWFRCRL*PPQDEA Trigger: TGCTTCATCCTGTGGTGGCCAAAGCCTGCATCGAAA...CCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGTGTATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | ATTGCCATGAACTTACTCAAAAGACATCATGCTTCATGCTTTAGCACATCAGCAAGAACGCGTCCACAATaGACTCCGCCTGAGGAACTT | + |
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Preference number: 4 (lower is better) Translates to: IAMNLLKRHHASCFSTSARTRPQ*TPPEEL Trigger: AAGTTCCTCAGGCGGAGTCCATTGTGGACGCGTTCT...TGCTGATGTGCTAAAGCATGAAGCATGATGTCTTTTGAGTAAGTTCATGGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR TCA 90 bp | ACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGATTCTTTTCAACAGGAACAACTaGGGACTTCACTGGGACCAG | + |
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Preference number: 4 (lower is better) Translates to: TQKVHRRLIKGFCDVWILFNRNN*GLHWDQ Trigger: CTGGTCCCAGTGAAGTCCTCAGTTGTTCCTGTTGAA...AAGAATCCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR GCA 90 bp | ACATACACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGAATATTAATCATTCCTaGCACACCCGCCCACTGTCC | + |
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Preference number: 4 (lower is better) Translates to: TYTQKVHRRLIKGFCDVWNINHS*HTRPLS Trigger: GGACAGTGGGCGGGTGTGGCAGGAATGATTAATATT...CCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGTGTATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR GCA 90 bp | ATTGCCATGAACTTACTCAAAAGACATCATGCTTCATGCTTTAGCACATCAGCACAGGGATTGCAGCTTTaGCTCTTGCTTGCCAACAGT | + |
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Preference number: 4 (lower is better) Translates to: IAMNLLKRHHASCFSTSAQGLQL*LLLANS Trigger: ACTGTTGGCAAGCAAGAGGCAAAGCTGCAATCCCTG...TGCTGATGTGCTAAAGCATGAAGCATGATGTCTTTTGAGTAAGTTCATGGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | AAAGGAAATAGTACAACTGCACTTGCTGATAATATGTTCTCGGGGAAAAGGAAGCTGATCACAAGATCCTaGGATTCCACCAGGGATTGC | + |
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Preference number: 4 (lower is better) Translates to: KGNSTTALADNMFSGKRKLITRS*DSTRDC Trigger: GCAATCCCTGGTGGAATCCCAGGATCTTGTGATCAG...CTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTACTATTTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR TCA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTTCTGTGATGTCTTCCTaGAGAATGCCACCAGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: VNDNILVLSGENHSFSVFSVMSS*RMPPAL Trigger: CAGGGCTGGTGGCATTCTTCAGGAAGACATCACAGA...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR TCA 90 bp | AAAGGAAATAGTACAACTGCACTTGCTGATAATATGTTCTCGGGGAAAAGGAAGTGCATAAAAGGCGTATaGTGTCCCAAAGCAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KGNSTTALADNMFSGKRKCIKGV*CPKARS Trigger: GCTCCTTGCTTTGGGACATCATACGCCTTTTATGCA...CTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTACTATTTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR TCA 90 bp | AAAGGAAATAGTACAACTGCACTTGCTGATAATATGTTCTCGGGGAAAAGGAAGCACCATCTGTTTTCCTaGCAAGATGATGATGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: KGNSTTALADNMFSGKRKHHLFS*QDDDGD Trigger: GTCGCCATCATCATCTTGTCAGGAAAACAGATGGTG...CTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTACTATTTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR TCA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTGTCCAGATGGATGTCTaGTGCCAAAGCTGTCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: VNDNILVLSGENHSFSVFVQMDV*CQSCPS Trigger: TGAGGGACAGCTTTGGCATCAGACATCCATCTGGAC...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | AAAGGAAATAGTACAACTGCACTTGCTGATAATATGTTCTCGGGGAAAAGGAAGCTGGCAAATTGTCAATaGAACACATCAGGATCCCGG | + |
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Preference number: 4 (lower is better) Translates to: KGNSTTALADNMFSGKRKLANCQ*NTSGSR Trigger: CCGGGATCCTGATGTGTTCCATTGACAATTTGCCAG...CTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTACTATTTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR TCA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTCCACTGGACTCCAGCTaGATTTGTATCGCAAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: VNDNILVLSGENHSFSVFPLDSS*ICIARD Trigger: ATCCCTTGCGATACAAATTCAGCTGGAGTCCAGTGG...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | ACATACACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGACTTCTCTTAATTCGTaGGGCTCCACATACTCACAA | + |
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Preference number: 4 (lower is better) Translates to: TYTQKVHRRLIKGFCDVWTSLNS*GSTYSQ Trigger: TTGTGAGTATGTGGAGCCCCACGAATTAAGAGAAGT...CCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGTGTATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTCTCAGCTGCTGCATTTaGTTGGTCATGTCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: VNDNILVLSGENHSFSVFLSCCI*LVMSEP Trigger: AGGCTCTGACATGACCAACCAAATGCAGCAGCTGAG...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | ACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGATTCTTCATCAAGACTCCCACTaGACTCCAGCTGAATTTGTA | + |
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Preference number: 4 (lower is better) Translates to: TQKVHRRLIKGFCDVWILHQDSH*TPAEFV Trigger: TACAAATTCAGCTGGAGTCCAGTGGGAGTCTTGATG...AAGAATCCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTCATCAAGCAACATTTTaGCTGCCATGGCTGTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: VNDNILVLSGENHSFSVFHQATF*LPWLSA Trigger: TGCCGACAGCCATGGCAGCCAAAATGTTGCTTGATG...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | ACATACACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGAATCCGCTCCAATATTaGCCCATAGATCTCCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: TYTQKVHRRLIKGFCDVWNPLQY*PIDLLC Trigger: ACAAAGGAGATCTATGGGCCAATATTGGAGCGGATT...CCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGTGTATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR TCA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTTCAGACAGGCTTCTGTaGTGTCTTCCTGAAGAATGC | + |
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Preference number: 4 (lower is better) Translates to: VNDNILVLSGENHSFSVFSDRLL*CLPEEC Trigger: GCATTCTTCAGGAAGACATCACAGAAGCCTGTCTGA...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR TCA 90 bp | ACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGATTCTTTCCCATACACTTTCCTaGGGTCTCCAGTTTTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: TQKVHRRLIKGFCDVWILSHTLS*GLQFLK Trigger: TTTCAAAAACTGGAGACCTCAGGAAAGTGTATGGGA...AAGAATCCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR GCA 90 bp | ACATACACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGATTGAATGCGTTCTCTaGTTTCTCGGAGTTTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: TYTQKVHRRLIKGFCDVWIECVL*FLGVSV Trigger: TACAGAAACTCCGAGAAAGCAGAGAACGCATTCAAT...CCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGTGTATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR TCA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTTCCATTGCCAACATGTaGTCAAGACCAGGGTCTAAT | + |
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Preference number: 4 (lower is better) Translates to: VNDNILVLSGENHSFSVFSIANM*SRPGSN Trigger: ATTAGACCCTGGTCTTGATCACATGTTGGCAATGGA...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR GCA 90 bp | ACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGATTCTTAATAATTTGCTGGTCTaGGTCATACATGCAAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: TQKVHRRLIKGFCDVWILNNLLV*VIHAKG Trigger: CCCTTTTGCATGTATGACGCAGACCAGCAAATTATT...AAGAATCCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR GCA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTCTCGATTGGAAGCTGTaGTGGCAAATTGTCAATGGA | + |
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Preference number: 4 (lower is better) Translates to: VNDNILVLSGENHSFSVFLDWKL*WQIVNG Trigger: TCCATTGACAATTTGCCAGCACAGCTTCCAATCGAG...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR GCA 90 bp | ATTGCCATGAACTTACTCAAAAGACATCATGCTTCATGCTTTAGCACATCAGCATTGAAAGGAATTGAATaGGTTCTCTGCTTTCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: IAMNLLKRHHASCFSTSALKGIE*VLCFLG Trigger: TCCGAGAAAGCAGAGAACGCATTCAATTCCTTTCAA...TGCTGATGTGCTAAAGCATGAAGCATGATGTCTTTTGAGTAAGTTCATGGCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | ACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGATTCTTCAGTTCTTTCATGGCTaGTGTAATATAGCTTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: TQKVHRRLIKGFCDVWILQFFHG*CNIACS Trigger: ACTGCAAGCTATATTACACCAGCCATGAAAGAACTG...AAGAATCCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTTGGCTCCCAGCTCTTTaGCAGTATCAATTGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VNDNILVLSGENHSFSVFWLPAL*QYQLFP Trigger: TGGAAACAATTGATACTGCCAAAGAGCTGGGAGCCA...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR TCA 90 bp | AAAGGAAATAGTACAACTGCACTTGCTGATAATATGTTCTCGGGGAAAAGGAAGTTTTCTCATAATCAATaGGCCGGATTTCCTGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: KGNSTTALADNMFSGKRKFSHNQ*AGFPVS Trigger: TGAAACAGGAAATCCGGCTCATTGATTATGAGAAAA...CTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTACTATTTCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR GCA 90 bp | AAAGGAAATAGTACAACTGCACTTGCTGATAATATGTTCTCGGGGAAAAGGAAGTGGTGTAATATAGCTTaGAGTGACCATATTAACCCT | + |
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Preference number: 4 (lower is better) Translates to: KGNSTTALADNMFSGKRKWCNIA*SDHINP Trigger: AGGGTTAATATGGTCACTGCAAGCTATATTACACCA...CTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTACTATTTCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CCA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTCATCAGTTTTTCCTCTaGAGGCCTTTTTACTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: VNDNILVLSGENHSFSVFHQFFL*RPFYSQ Trigger: TTGGGAGTAAAAAGGCCTCCAGAGGAAAAACTGATG...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR GCA 90 bp | ACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGATTCTTAAATACAATGCCTTCTaGTTTAATCCGCTCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: TQKVHRRLIKGFCDVWILKYNAF*FNPLQY Trigger: ATATTGGAGCGGATTAAAGCAGAAGGCATTGTATTT...AAGAATCCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAATAGTACAACTGCACTTGCTGATAATATGTTCTCGGGGAAAAGGAAGATCCATTCAAGGCTTTaGAATATCCCTTATATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGNSTTALADNMFSGKRKIHSRL*NIPYIS Trigger: TGAGATATAAGGGATATTCCAAAGCCTTGAATGGAT...CTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTACTATTTCCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS GCA 90 bp | CAGAGGCGCCCTGCGCTCCCAGGCGTTCACGTCCTCCCTCCGGAGTaGCATCACTGGCTTGTGGTGGAGGCCTCTGGAGAGGCAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QRRPALPGVHVLPPE*HHWLVVEASGEAGS Trigger: AGAGCCTGCCTCTCCAGAGGCCTCCACCACAAGCCAGTGATGGCACTCCGGAGGGAGGACGTGAACGCCTGGGAGCGCAGGGCGCCTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS CCA 90 bp | CCTGCGCTCCCAGGCGTTCACGTCCTCCCTCCGGAGTGCCATCACTaGCTTGTGGTGGAGGCCTCTGGAGAGGCAGGCTCTAAGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PALPGVHVLPPECHH*LVVEASGEAGSKPG Trigger: GCCAGGCTTAGAGCCTGCCTCTCCAGAGGCCTCCACCACAAGCCAGTGATGGCACTCCGGAGGGAGGACGTGAACGCCTGGGAGCGCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS CCA 90 bp | TCCCAGGCGTTCACGTCCTCCCTCCGGAGTGCCATCACTGGCTTGTaGTGGAGGCCTCTGGAGAGGCAGGCTCTAAGCCTGGCCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SQAFTSSLRSAITGL*WRPLERQALSLASL Trigger: GAGACTGGCCAGGCTTAGAGCCTGCCTCTCCAGAGGCCTCCACCACAAGCCAGTGATGGCACTCCGGAGGGAGGACGTGAACGCCTGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS TCA 90 bp | TTTGAGACCAAGTGCTTGGAGAACGCGTCCACAATGGACTCCGCCTaGGGAACTTGTTCATCCCCCAGTAAGCCCAACCATTCTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FETKCLENASTMDSA*GTCSSPSKPNHSAA Trigger: AGCTGCAGAATGGTTGGGCTTACTGGGGGATGAACAAGTTCCTCAGGCGGAGTCCATTGTGGACGCGTTCTCCAAGCACTTGGTCTCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS CCA 90 bp | CATAGGAGAGTTTTGAGACCAAGTGCTTGGAGAACGCGTCCACAATaGACTCCGCCTGAGGAACTTGTTCATCCCCCAGTAAGCCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: HRRVLRPSAWRTRPQ*TPPEELVHPPVSPT Trigger: GGTTGGGCTTACTGGGGGATGAACAAGTTCCTCAGGCGGAGTCCATTGTGGACGCGTTCTCCAAGCACTTGGTCTCAAAACTCTCCTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS GCA 90 bp | CAGGATCCCGGAGCCTTCAACACTGTCGTGAATAATTTGCTGGTCTaGGTCATACATGCAAAAGGGCCGTTCTATGGTGGTGCACTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QDPGAFNTVVNNLLV*VIHAKGPFYGGALS Trigger: ACTGAGTGCACCACCATAGAACGGCCCTTTTGCATGTATGACGCAGACCAGCAAATTATTCACGACAGTGTTGAAGGCTCCGGGATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS CCA 90 bp | ACTTGTTCATCCCCCAGTAAGCCCAACCATTCTGCAGCTTCCAGCTaGGTATTGTCCCCTCCCAGCTTTGTGAAGACAACTTCCTTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TCSSPSKPNHSAASS*VLSPPSFVKTTSLS Trigger: GCTTAAGGAAGTTGTCTTCACAAAGCTGGGAGGGGACAATACCCAGCTGGAAGCTGCAGAATGGTTGGGCTTACTGGGGGATGAACAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS TCA 90 bp | GGCCTTTTTACTCCCAAAATCAGACAGGCTTCTGTGATGTCTTCCTaGAGAATGCCACCAGCCCTGACATACTCCTTGTCATGGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLFTPKIRQASVMSS*RMPPALTYSLSWMA Trigger: GGCCATCCATGACAAGGAGTATGTCAGGGCTGGTGGCATTCTTCAGGAAGACATCACAGAAGCCTGTCTGATTTTGGGAGTAAAAAGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS TCA 90 bp | GACTCCCACTGGACTCCAGCTGAATTTGTATCGCAAGGGATTATCTaGATGTTCAGGGGCCGGAAGGCCACCACAGTAGGAAACATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: DSHWTPAEFVSQGII*MFRGRKATTVGNIR Trigger: TCTTATGTTTCCTACTGTGGTGGCCTTCCGGCCCCTGAACATTCAGATAATCCCTTGCGATACAAATTCAGCTGGAGTCCAGTGGGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS TCA 90 bp | CCTCATCACAATCATATCCTTTTCTTCAGGGCCATAGGAGAGTTTTaGGACCAAGTGCTTGGAGAACGCGTCCACAATGGACTCCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PHHNHILFFRAIGEF*DQVLGERVHNGLRL Trigger: CAGGCGGAGTCCATTGTGGACGCGTTCTCCAAGCACTTGGTCTCAAAACTCTCCTATGGCCCTGAAGAAAAGGATATGATTGTGATGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS CCA 90 bp | TCGTGGGGCTCCACATACTCACAAGGTAGCTCATTAAAGACTTCCTaGGCTCCCTTGGATACATTGCCAGTCCCTGTGAAGACAAACGTT | + |
|
Preference number: 5 (lower is better) Translates to: SWGSTYSQGSSLKTS*APLDTLPVPVKTNV Trigger: AACGTTTGTCTTCACAGGGACTGGCAATGTATCCAAGGGAGCCCAGGAAGTCTTTAATGAGCTACCTTGTGAGTATGTGGAGCCCCACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | ACATACACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGTTCCAGGTGAGAGGGTaGGCCTCAGGTCGGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TYTQKVHRRLIKGFCDVWFQVRG*ASGRRA Trigger: TGCCCTCCGACCTGAGGCCAACCCTCTCACCTGGAA...CCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGTGTATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS GCA 90 bp | GTAAAGCATGTCTCCAAAGTATTCCGTAGCCTCGATTGGAAGCTGTaGTGGCAAATTGTCAATGGAACACATCAGGATCCCGGAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VKHVSKVFRSLDWKL*WQIVNGTHQDPGAF Trigger: GAAGGCTCCGGGATCCTGATGTGTTCCATTGACAATTTGCCAGCACAGCTTCCAATCGAGGCTACGGAATACTTTGGAGACATGCTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS CCA 90 bp | TATCCTTTTCTTCAGGGCCATAGGAGAGTTTTGAGACCAAGTGCTTaGAGAACGCGTCCACAATGGACTCCGCCTGAGGAACTTGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: YPFLQGHRRVLRPSA*RTRPQWTPPEELVH Trigger: ATGAACAAGTTCCTCAGGCGGAGTCCATTGTGGACGCGTTCTCCAAGCACTTGGTCTCAAAACTCTCCTATGGCCCTGAAGAAAAGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS TCA 90 bp | GACCCAAGGACCAAAACCTTCTTCTTGGTACTCATTGAAAGGAATTaGATGCGTTCTGTCTCGCACCACTGGGGAGAAGTTCTGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DPRTKTFFLVLIERN*MRSVSHHWGEVLAF Trigger: GAAAGCCAGAACTTCTCCCCAGTGGTGCGAGACAGAACGCATTCAATTCCTTTCAATGAGTACCAAGAAGAAGGTTTTGGTCCTTGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149864.2 |
||
| CDS TCA 90 bp | TACATAGCCAGACCCAAGGACCAAAACCTTCTTCTTGGTACTCATTaGAAGGAATTGAATGCGTTCTGTCTCGCACCACTGGGGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: YIARPKDQNLLLGTH*KELNAFCLAPLGRS Trigger: ACTTCTCCCCAGTGGTGCGAGACAGAACGCATTCAATTCCTTTCAATGAGTACCAAGAAGAAGGTTTTGGTCCTTGGGTCTGGCTATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149864.2 |
||
| CDS-3UTR CAA 90 bp | ACATACACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGGCTCAGCTGCTGCATTaGGTTGGTCATGTCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TYTQKVHRRLIKGFCDVWAQLLH*VGHVRA Trigger: GGCTCTGACATGACCAACCAAATGCAGCAGCTGAGC...CCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGTGTATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS TCA 90 bp | GCTCCCAGCTCTTTGGCAGTATCAATTGTTTCCATTGCCAACATGTaGTCAAGACCAGGGTCTAATCCCAACTCACCAATGACTGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: APSSLAVSIVSIANM*SRPGSNPNSPMTVM Trigger: CATTACAGTCATTGGTGAGTTGGGATTAGACCCTGGTCTTGATCACATGTTGGCAATGGAAACAATTGATACTGCCAAAGAGCTGGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS GCA 90 bp | ATCACAAGATCCTGGGATTCCACCAGGGATTGCAGCTTTGCCTCTTaGTTGCCAACAGTCAAACTGACAGGGTTAATGTTGTATTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ITRSWDSTRDCSFAS*LPTVKLTGLMLYFL Trigger: CAAGAAATACAACATTAACCCTGTCAGTTTGACTGTTGGCAAGCAAGAGGCAAAGCTGCAATCCCTGGTGGAATCCCAGGATCTTGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031707.14 ENSMUST00000149864.2 |
||
| CDS GCA 90 bp | ATCCACACTCTTTTCCAGTTCTTTCATGGCTGGTGTAATATAGCTTaGAGTGACCATATTAACCCTGCTTTCGATGCAGGCTTTGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IHTLFQFFHGWCNIA*SDHINPAFDAGFGH Trigger: GTGGCCAAAGCCTGCATCGAAAGCAGGGTTAATATGGTCACTGCAAGCTATATTACACCAGCCATGAAAGAACTGGAAAAGAGTGTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031707.14 ENSMUST00000149864.2 |
||
| CDS CCA 90 bp | AACATAAGGGTAAAGCATGTCTCCAAAGTATTCCGTAGCCTCGATTaGAAGCTGTGCTGGCAAATTGTCAATGGAACACATCAGGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: NIRVKHVSKVFRSLD*KLCWQIVNGTHQDP Trigger: GGGATCCTGATGTGTTCCATTGACAATTTGCCAGCACAGCTTCCAATCGAGGCTACGGAATACTTTGGAGACATGCTTTACCCTTATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CAA 90 bp | ACATACACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGAGTTTGGTGATGCCCTaGATGTGCTTGGGAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TYTQKVHRRLIKGFCDVWSLVMP*MCLGAR Trigger: TCTGGCTCCCAAGCACATCAAGGGCATCACCAAACT...CCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGTGTATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CAA 90 bp | AAAGGAAATAGTACAACTGCACTTGCTGATAATATGTTCTCGGGGAAAAGGAAGTGGATGGCCCGTCTGTaGGAAGGCTGTATCAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: KGNSTTALADNMFSGKRKWMARL*EGCIKT Trigger: GGTCTTGATACAGCCTTCCAACAGACGGGCCATCCA...CTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTACTATTTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | ATTGCCATGAACTTACTCAAAAGACATCATGCTTCATGCTTTAGCACATCAGCAGCTCCCTTGGATACATaGCCAGTCCCTGTGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: IAMNLLKRHHASCFSTSAAPLDT*PVPVKT Trigger: TGTCTTCACAGGGACTGGCAATGTATCCAAGGGAGC...TGCTGATGTGCTAAAGCATGAAGCATGATGTCTTTTGAGTAAGTTCATGGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | ATTGCCATGAACTTACTCAAAAGACATCATGCTTCATGCTTTAGCACATCAGCACAGGCGAGGGGTGTTTaGCTCCCAGTAGATTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: IAMNLLKRHHASCFSTSAQARGV*LPVDSI Trigger: AATGGAATCTACTGGGAGCAAAACACCCCTCGCCTG...TGCTGATGTGCTAAAGCATGAAGCATGATGTCTTTTGAGTAAGTTCATGGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CAA 90 bp | ATTGCCATGAACTTACTCAAAAGACATCATGCTTCATGCTTTAGCACATCAGCAGGATTCCACCAGGGATaGCAGCTTTGCCTCTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IAMNLLKRHHASCFSTSAGFHQG*QLCLLL Trigger: AAGCAAGAGGCAAAGCTGCAATCCCTGGTGGAATCC...TGCTGATGTGCTAAAGCATGAAGCATGATGTCTTTTGAGTAAGTTCATGGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS TCA 90 bp | ATTTCCTGTTTCAGAACCTCATCCAACAGGTTCATATTGGCTTCCTaGGCTTTTATTGTGTGGGAAAAGAAGGCGTACGTCTTCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISCFRTSSNRFILAS*AFIVWEKKAYVFLD Trigger: GTCCAAGAAGACGTACGCCTTCTTTTCCCACACAATAAAAGCTCAGGAAGCCAATATGAACCTGTTGGATGAGGTTCTGAAACAGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS CCA 90 bp | TACACTTTCCTGAGGTCTCCAGTTTTTGAAACTTCTCTTAATTCGTaGGGCTCCACATACTCACAAGGTAGCTCATTAAAGACTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YTFLRSPVFETSLNS*GSTYSQGSSLKTSW Trigger: CCAGGAAGTCTTTAATGAGCTACCTTGTGAGTATGTGGAGCCCCACGAATTAAGAGAAGTTTCAAAAACTGGAGACCTCAGGAAAGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTCCATCAAGCAACATTTaGGCTGCCATGGCTGTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VNDNILVLSGENHSFSVFPSSNI*AAMAVG Trigger: GCCGACAGCCATGGCAGCCAAAATGTTGCTTGATGG...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | AAAGGAAATAGTACAACTGCACTTGCTGATAATATGTTCTCGGGGAAAAGGAAGGGCCCCATTAGGCCTTaGGCTTCAATTTCACCATCA | + |
|
Preference number: 5 (lower is better) Translates to: KGNSTTALADNMFSGKRKGPIRP*ASISPS Trigger: TGATGGTGAAATTGAAGCCAAAGGCCTAATGGGGCC...CTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTACTATTTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS TCA 90 bp | TACATAGCCAGACCCAAGGACCAAAACCTTCTTCTTGGTACTCATTaGAAGGAATTGAATGCGTTCTCTGCTTTCTCGGAGTTTCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: YIARPKDQNLLLGTH*KELNAFSAFSEFLY Trigger: ATACAGAAACTCCGAGAAAGCAGAGAACGCATTCAATTCCTTTCAATGAGTACCAAGAAGAAGGTTTTGGTCCTTGGGTCTGGCTATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | ACATACACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGAAGGCGTACGTCTTCTaGGACATCAGTTTTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TYTQKVHRRLIKGFCDVWKAYVF*DISFSS Trigger: AGAGGAAAAACTGATGTCCAAGAAGACGTACGCCTT...CCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGTGTATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | ACATACACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGCTTCCTGAGCTTTTATaGTGTGGGAAAAGAAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: TYTQKVHRRLIKGFCDVWLPELL*CGKRRR Trigger: ACGCCTTCTTTTCCCACACAATAAAAGCTCAGGAAG...CCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGTGTATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | ACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGATTCTTAGCTGTGCTGGCAAATaGTCAATGGAACACATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TQKVHRRLIKGFCDVWILSCAGK*SMEHIR Trigger: CCTGATGTGTTCCATTGACAATTTGCCAGCACAGCT...AAGAATCCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | ATTGCCATGAACTTACTCAAAAGACATCATGCTTCATGCTTTAGCACATCAGCATTGCAGCTTTGCCTCTaGCTTGCCAACAGTCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: IAMNLLKRHHASCFSTSALQLCL*LANSQT Trigger: AGTTTGACTGTTGGCAAGCAAGAGGCAAAGCTGCAA...TGCTGATGTGCTAAAGCATGAAGCATGATGTCTTTTGAGTAAGTTCATGGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | ATTGCCATGAACTTACTCAAAAGACATCATGCTTCATGCTTTAGCACATCAGCAGGGTATGCTTCTCTGTaGATGAGTCCCAACTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: IAMNLLKRHHASCFSTSAGYASL*MSPNFT Trigger: TGTGAAGTTGGGACTCATCAACAGAGAAGCATACCC...TGCTGATGTGCTAAAGCATGAAGCATGATGTCTTTTGAGTAAGTTCATGGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | ATTGCCATGAACTTACTCAAAAGACATCATGCTTCATGCTTTAGCACATCAGCAGGACTCCAGCTGAATTaGTATCGCAAGGGATTATCT | + |
|
Preference number: 5 (lower is better) Translates to: IAMNLLKRHHASCFSTSAGLQLN*YRKGLS Trigger: AGATAATCCCTTGCGATACAAATTCAGCTGGAGTCC...TGCTGATGTGCTAAAGCATGAAGCATGATGTCTTTTGAGTAAGTTCATGGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTATGGGTGTGACAGAGTaGAGAAAAGAGACTCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VNDNILVLSGENHSFSVFMGVTE*RKETPP Trigger: AGGGGGAGTCTCTTTTCTCAACTCTGTCACACCCAT...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | AAAGGAAATAGTACAACTGCACTTGCTGATAATATGTTCTCGGGGAAAAGGAAGAGGGTCCTATTGACTTaGGCATTAAACCCAGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: KGNSTTALADNMFSGKRKRVLLT*ALNPEI Trigger: TATCTCTGGGTTTAATGCCAAAGTCAATAGGACCCT...CTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTACTATTTCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | ATTGCCATGAACTTACTCAAAAGACATCATGCTTCATGCTTTAGCACATCAGCAACGTTAAGGGTCCTATaGACTTTGGCATTAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: IAMNLLKRHHASCFSTSATLRVL*TLALNP Trigger: TGGGTTTAATGCCAAAGTCAATAGGACCCTTAACGT...TGCTGATGTGCTAAAGCATGAAGCATGATGTCTTTTGAGTAAGTTCATGGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | ACATACACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGCTTTGGCAGTATCAATaGTTTCCATTGCCAACATGT | + |
|
Preference number: 5 (lower is better) Translates to: TYTQKVHRRLIKGFCDVWLWQYQ*FPLPTC Trigger: ACATGTTGGCAATGGAAACAATTGATACTGCCAAAG...CCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGTGTATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS TCA 90 bp | GACCCAAGGACCAAAACCTTCTTCTTGGTACTCATTGAAAGGAATTaGATGCGTTCTCTGCTTTCTCGGAGTTTCTGTATATATTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: DPRTKTFFLVLIERN*MRSLLSRSFCIYLY Trigger: ATACAAATATATACAGAAACTCCGAGAAAGCAGAGAACGCATTCAATTCCTTTCAATGAGTACCAAGAAGAAGGTTTTGGTCCTTGGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | ACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGATTCTTCATATTGCCACAAGTTaGTGTGGTAATTCAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: TQKVHRRLIKGFCDVWILHIATS*CGNSGH Trigger: ATGTCCTGAATTACCACACAAACTTGTGGCAATATG...AAGAATCCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
||
| CDS-3UTR CAA 90 bp | ACACAGAAAGTACACAGGAGACTTATTAAAGGGTTCTGTGATGTCTGGATTCTTACCAAAACCTTCTTCTaGGTACTCATTGAAAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TQKVHRRLIKGFCDVWILTKTFF*VLIERN Trigger: ATTCCTTTCAATGAGTACCAAGAAGAAGGTTTTGGT...AAGAATCCAGACATCACAGAACCCTTTAATAAGTCTCCTGTGTACTTTCTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CAA 90 bp | ATTGCCATGAACTTACTCAAAAGACATCATGCTTCATGCTTTAGCACATCAGCATATCAATTGTTTCCATaGCCAACATGTGATCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: IAMNLLKRHHASCFSTSAYQLFP*PTCDQD Trigger: GTCTTGATCACATGTTGGCAATGGAAACAATTGATA...TGCTGATGTGCTAAAGCATGAAGCATGATGTCTTTTGAGTAAGTTCATGGCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CAA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTCTGAAATGTCACATATaGCCACAAGTTTGTGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VNDNILVLSGENHSFSVFLKCHI*PQVCVV Trigger: TACCACACAAACTTGTGGCAATATGTGACATTTCAG...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS-3UTR CAA 90 bp | GTAAATGACAACATACTTGTGCTCTCAGGTGAAAACCATTCATTCAGTGTTTTTTTAATGTTGTATTTCTaGCTCAGCTGCTGCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VNDNILVLSGENHSFSVFLMLYF*LSCCIW Trigger: CCAAATGCAGCAGCTGAGCAAGAAATACAACATTAA...AAAAACACTGAATGAATGGTTTTCACCTGAGAGCACAAGTATGTTGTCATTTAC 37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS GCA 72 bp | CCTGCGCTCCCAGGCGTTCACGTCCTCCCTCCGGAGTaGCATCACTGGCTTGTGGTGGAGGCCTCTGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PALPGVHVLPPE*HHWLVVEASGE Trigger: CTCTCCAGAGGCCTCCACCACAAGCCAGTGATGGCACTCCGGAGGGAGGACGTGAACGCCTGGGAGCGCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 90 bp | CGCTCCCAGGCGTTCACGTCCTCCCTCCGGAGTGCCATCACTGGCTaGTGGTGGAGGCCTCTGGAGAGGCAGGCTCTAAGCCTGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSQAFTSSLRSAITG*WWRPLERQALSLAS Trigger: ACTGGCCAGGCTTAGAGCCTGCCTCTCCAGAGGCCTCCACCACAAGCCAGTGATGGCACTCCGGAGGGAGGACGTGAACGCCTGGGAGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CCA 72 bp | CCAGGCGTTCACGTCCTCCCTCCGGAGTGCCATCACTaGCTTGTGGTGGAGGCCTCTGGAGAGGCAGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGVHVLPPECHH*LVVEASGEAGS Trigger: AGAGCCTGCCTCTCCAGAGGCCTCCACCACAAGCCAGTGATGGCACTCCGGAGGGAGGACGTGAACGCCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 72 bp | GCGTTCACGTCCTCCCTCCGGAGTGCCATCACTGGCTaGTGGTGGAGGCCTCTGGAGAGGCAGGCTCTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AFTSSLRSAITG*WWRPLERQALS Trigger: GCTTAGAGCCTGCCTCTCCAGAGGCCTCCACCACAAGCCAGTGATGGCACTCCGGAGGGAGGACGTGAACGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS GCA 72 bp | CATAGCCAGCATCACGGACAGCCTGCACGGCCTGGCTaGTGTTCCTGTAGTTGTGAGCCATGCCAAGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: HSQHHGQPARPG*CSCSCEPCQDA Trigger: TGCATCTTGGCATGGCTCACAACTACAGGAACAGCAGCCAGGCCGTGCAGGCTGTCCGTGATGCTGGCTATG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS TCA 72 bp | TCACTGGGACCAGGAGACTCTGAGCATCCTGACGTGTaGGCAGGCGAGGGGTGTTTTGCTCCCAGTAGATTC | + |
|
Preference number: 6 (lower is better) Translates to: SLGPGDSEHPDV*AGEGCFAPSRF Trigger: GAATCTACTGGGAGCAAAACACCCCTCGCCTGCTCACACGTCAGGATGCTCAGAGTCTCCTGGTCCCAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS TCA 72 bp | AAGTGCTTGGAGAACGCGTCCACAATGGACTCCGCCTaGGGAACTTGTTCATCCCCCAGTAAGCCCAACCAT | + |
|
Preference number: 6 (lower is better) Translates to: KCLENASTMDSA*GTCSSPSKPNH Trigger: ATGGTTGGGCTTACTGGGGGATGAACAAGTTCCTCAGGCGGAGTCCATTGTGGACGCGTTCTCCAAGCACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS GCA 72 bp | TGCCATGGCTGTCGGCAACCCCACAGTTTTAGCCATTaGCGAGAAGCCGTTGAAGTCTCCATAAACCACGAG | + |
|
Preference number: 6 (lower is better) Translates to: CHGCRQPHSFSH*REAVEVSINHE Trigger: CTCGTGGTTTATGGAGACTTCAACGGCTTCTCGGCAATGGCTAAAACTGTGGGGTTGCCGACAGCCATGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CCA 72 bp | TCCCCCAGTAAGCCCAACCATTCTGCAGCTTCCAGCTaGGTATTGTCCCCTCCCAGCTTTGTGAAGACAACT | + |
|
Preference number: 6 (lower is better) Translates to: SPSKPNHSAASS*VLSPPSFVKTT Trigger: AGTTGTCTTCACAAAGCTGGGAGGGGACAATACCCAGCTGGAAGCTGCAGAATGGTTGGGCTTACTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CCA 72 bp | CTTCAGGGCCATAGGAGAGTTTTGAGACCAAGTGCTTaGAGAACGCGTCCACAATGGACTCCGCCTGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LQGHRRVLRPSA*RTRPQWTPPEE Trigger: TTCCTCAGGCGGAGTCCATTGTGGACGCGTTCTCCAAGCACTTGGTCTCAAAACTCTCCTATGGCCCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CCA 72 bp | GTTTTGAGACCAAGTGCTTGGAGAACGCGTCCACAATaGACTCCGCCTGAGGAACTTGTTCATCCCCCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: VLRPSAWRTRPQ*TPPEELVHPPV Trigger: TACTGGGGGATGAACAAGTTCCTCAGGCGGAGTCCATTGTGGACGCGTTCTCCAAGCACTTGGTCTCAAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS TCA 72 bp | TGGACTCCAGCTGAATTTGTATCGCAAGGGATTATCTaGATGTTCAGGGGCCGGAAGGCCACCACAGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WTPAEFVSQGII*MFRGRKATTVG Trigger: TCCTACTGTGGTGGCCTTCCGGCCCCTGAACATTCAGATAATCCCTTGCGATACAAATTCAGCTGGAGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS GCA 72 bp | CACAAGATCCTGGGATTCCACCAGGGATTGCAGCTTTaGCTCTTGCTTGCCAACAGTCAAACTGACAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: HKILGFHQGLQL*LLLANSQTDRV Trigger: AACCCTGTCAGTTTGACTGTTGGCAAGCAAGAGGCAAAGCTGCAATCCCTGGTGGAATCCCAGGATCTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031707.14 ENSMUST00000149864.2 |
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| CDS CAA 72 bp | CAGGATCCCGGAGCCTTCAACACTGTCGTGAATAATTaGCTGGTCTGCGTCATACATGCAAAAGGGCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: QDPGAFNTVVNN*LVCVIHAKGPF Trigger: GAACGGCCCTTTTGCATGTATGACGCAGACCAGCAAATTATTCACGACAGTGTTGAAGGCTCCGGGATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 72 bp | TTGGCCTCAGGTCGGAGGGCAGGGTATGCTTCTCTGTaGATGAGTCCCAACTTCACAAATCCATTCAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LASGRRAGYASL*MSPNFTNPFKA Trigger: AGCCTTGAATGGATTTGTGAAGTTGGGACTCATCAACAGAGAAGCATACCCTGCCCTCCGACCTGAGGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 90 bp | TCTCCAAAGTATTCCGTAGCCTCGATTGGAAGCTGTGCTGGCAAATaGTCAATGGAACACATCAGGATCCCGGAGCCTTCAACACTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SPKYSVASIGSCAGK*SMEHIRIPEPSTLS Trigger: CGACAGTGTTGAAGGCTCCGGGATCCTGATGTGTTCCATTGACAATTTGCCAGCACAGCTTCCAATCGAGGCTACGGAATACTTTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 90 bp | GGCTGCATTATGTTCATCAAGACTCCCACTGGACTCCAGCTGAATTaGTATCGCAAGGGATTATCTGAATGTTCAGGGGCCGGAAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GCIMFIKTPTGLQLN*YRKGLSECSGAGRP Trigger: TGGCCTTCCGGCCCCTGAACATTCAGATAATCCCTTGCGATACAAATTCAGCTGGAGTCCAGTGGGAGTCTTGATGAACATAATGCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 90 bp | GTGAGAGGGTTGGCCTCAGGTCGGAGGGCAGGGTATGCTTCTCTGTaGATGAGTCCCAACTTCACAAATCCATTCAAGGCTTTGGAATAT | + |
|
Preference number: 6 (lower is better) Translates to: VRGLASGRRAGYASL*MSPNFTNPFKALEY Trigger: ATATTCCAAAGCCTTGAATGGATTTGTGAAGTTGGGACTCATCAACAGAGAAGCATACCCTGCCCTCCGACCTGAGGCCAACCCTCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 90 bp | CCCTCATCACAATCATATCCTTTTCTTCAGGGCCATAGGAGAGTTTaGAGACCAAGTGCTTGGAGAACGCGTCCACAATGGACTCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSSQSYPFLQGHRRV*RPSAWRTRPQWTPP Trigger: AGGCGGAGTCCATTGTGGACGCGTTCTCCAAGCACTTGGTCTCAAAACTCTCCTATGGCCCTGAAGAAAAGGATATGATTGTGATGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS TCA 72 bp | CTTCCTGGGCTCCCTTGGATACATTGCCAGTCCCTGTaGAGACAAACGTTAAGGGTCCTATTGACTTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPGLPWIHCQSL*RQTLRVLLTLA Trigger: TGCCAAAGTCAATAGGACCCTTAACGTTTGTCTTCACAGGGACTGGCAATGTATCCAAGGGAGCCCAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS GCA 72 bp | AAGCTGATCACAAGATCCTGGGATTCCACCAGGGATTaGAGCTTTGCCTCTTGCTTGCCAACAGTCAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: KLITRSWDSTRD*SFASCLPTVKL Trigger: CAGTTTGACTGTTGGCAAGCAAGAGGCAAAGCTGCAATCCCTGGTGGAATCCCAGGATCTTGTGATCAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031707.14 ENSMUST00000149864.2 |
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| CDS CCA 72 bp | GAATGCGTTCTGTCTCGCACCACTGGGGAGAAGTTCTaGCTTTCCAGAGGTTGTGATGCATCGGATAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: ECVLSRTTGEKF*LSRGCDASDNK Trigger: TTTGTTATCCGATGCATCACAACCTCTGGAAAGCCAGAACTTCTCCCCAGTGGTGCGAGACAGAACGCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149864.2 |
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| CDS CAA 72 bp | TATTCCGTAGCCTCGATTGGAAGCTGTGCTGGCAAATaGTCAATGGAACACATCAGGATCCCGGAGCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: YSVASIGSCAGK*SMEHIRIPEPS Trigger: TGAAGGCTCCGGGATCCTGATGTGTTCCATTGACAATTTGCCAGCACAGCTTCCAATCGAGGCTACGGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 72 bp | CAAGCTGATCACAAGATCCTGGGATTCCACCAGGGATaGCAGCTTTGCCTCTTGCTTGCCAACAGTCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: QADHKILGFHQG*QLCLLLANSQT Trigger: AGTTTGACTGTTGGCAAGCAAGAGGCAAAGCTGCAATCCCTGGTGGAATCCCAGGATCTTGTGATCAGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031707.14 ENSMUST00000149864.2 |
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| CDS CAA 72 bp | AGTAAGCCCAACCATTCTGCAGCTTCCAGCTGGGTATaGTCCCCTCCCAGCTTTGTGAAGACAACTTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SKPNHSAASSWV*SPPSFVKTTSL Trigger: TAAGGAAGTTGTCTTCACAAAGCTGGGAGGGGACAATACCCAGCTGGAAGCTGCAGAATGGTTGGGCTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS TCA 72 bp | ACTCCCAAAATCAGACAGGCTTCTGTGATGTCTTCCTaGAGAATGCCACCAGCCCTGACATACTCCTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TPKIRQASVMSS*RMPPALTYSLS Trigger: TGACAAGGAGTATGTCAGGGCTGGTGGCATTCTTCAGGAAGACATCACAGAAGCCTGTCTGATTTTGGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS GCA 72 bp | GGAGCCTTCAACACTGTCGTGAATAATTTGCTGGTCTaGGTCATACATGCAAAAGGGCCGTTCTATGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GAFNTVVNNLLV*VIHAKGPFYGG Trigger: ACCACCATAGAACGGCCCTTTTGCATGTATGACGCAGACCAGCAAATTATTCACGACAGTGTTGAAGGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS GCA 72 bp | GTCTCCAAAGTATTCCGTAGCCTCGATTGGAAGCTGTaGTGGCAAATTGTCAATGGAACACATCAGGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: VSKVFRSLDWKL*WQIVNGTHQDP Trigger: GGGATCCTGATGTGTTCCATTGACAATTTGCCAGCACAGCTTCCAATCGAGGCTACGGAATACTTTGGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CCA 72 bp | GAAGGCCACCACAGTAGGAAACATAAGACTCAACCGTaGCTCCCAGCTCTTTGGCAGTATCAATTGTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: EGHHSRKHKTQP*LPALWQYQLFP Trigger: TGGAAACAATTGATACTGCCAAAGAGCTGGGAGCCACGGTTGAGTCTTATGTTTCCTACTGTGGTGGCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 72 bp | ATCCTGGGATTCCACCAGGGATTGCAGCTTTGCCTCTaGCTTGCCAACAGTCAAACTGACAGGGTTAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: ILGFHQGLQLCL*LANSQTDRVNV Trigger: AACATTAACCCTGTCAGTTTGACTGTTGGCAAGCAAGAGGCAAAGCTGCAATCCCTGGTGGAATCCCAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031707.14 ENSMUST00000149864.2 |
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| CDS CAA 72 bp | AGGCCTTTGGCTTCAATTTCACCATCAAGCAACATTTaGGCTGCCATGGCTGTCGGCAACCCCACAGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: RPLASISPSSNI*AAMAVGNPTVL Trigger: TAAAACTGTGGGGTTGCCGACAGCCATGGCAGCCAAAATGTTGCTTGATGGTGAAATTGAAGCCAAAGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 90 bp | ACTCAACCGTGGCTCCCAGCTCTTTGGCAGTATCAATTGTTTCCATaGCCAACATGTGATCAAGACCAGGGTCTAATCCCAACTCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: TQPWLPALWQYQLFP*PTCDQDQGLIPTHQ Trigger: TTGGTGAGTTGGGATTAGACCCTGGTCTTGATCACATGTTGGCAATGGAAACAATTGATACTGCCAAAGAGCTGGGAGCCACGGTTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 90 bp | ACAAGATCCTGGGATTCCACCAGGGATTGCAGCTTTGCCTCTTGCTaGCCAACAGTCAAACTGACAGGGTTAATGTTGTATTTCTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TRSWDSTRDCSFASC*PTVKLTGLMLYFLL Trigger: GAGCAAGAAATACAACATTAACCCTGTCAGTTTGACTGTTGGCAAGCAAGAGGCAAAGCTGCAATCCCTGGTGGAATCCCAGGATCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031707.14 ENSMUST00000149864.2 |
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| CDS CAA 90 bp | ATACATAGCCAGACCCAAGGACCAAAACCTTCTTCTTGGTACTCATaGAAAGGAATTGAATGCGTTCTGTCTCGCACCACTGGGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: IHSQTQGPKPSSWYS*KGIECVLSRTTGEK Trigger: CTTCTCCCCAGTGGTGCGAGACAGAACGCATTCAATTCCTTTCAATGAGTACCAAGAAGAAGGTTTTGGTCCTTGGGTCTGGCTATGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149864.2 |
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| CDS CAA 72 bp | TCACAAGGTAGCTCATTAAAGACTTCCTGGGCTCCCTaGGATACATTGCCAGTCCCTGTGAAGACAAACGTT | + |
|
Preference number: 6 (lower is better) Translates to: SQGSSLKTSWAP*DTLPVPVKTNV Trigger: AACGTTTGTCTTCACAGGGACTGGCAATGTATCCAAGGGAGCCCAGGAAGTCTTTAATGAGCTACCTTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 72 bp | TGGCTCCCAGCTCTTTGGCAGTATCAATTGTTTCCATaGCCAACATGTGATCAAGACCAGGGTCTAATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WLPALWQYQLFP*PTCDQDQGLIP Trigger: TGGGATTAGACCCTGGTCTTGATCACATGTTGGCAATGGAAACAATTGATACTGCCAAAGAGCTGGGAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 72 bp | ATGTTCATCAAGACTCCCACTGGACTCCAGCTGAATTaGTATCGCAAGGGATTATCTGAATGTTCAGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: MFIKTPTGLQLN*YRKGLSECSGA Trigger: GGCCCCTGAACATTCAGATAATCCCTTGCGATACAAATTCAGCTGGAGTCCAGTGGGAGTCTTGATGAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS TCA 72 bp | AGACCCAAGGACCAAAACCTTCTTCTTGGTACTCATTaGAAGGAATTGAATGCGTTCTGTCTCGCACCACTG | + |
|
Preference number: 6 (lower is better) Translates to: RPKDQNLLLGTH*KELNAFCLAPL Trigger: CAGTGGTGCGAGACAGAACGCATTCAATTCCTTTCAATGAGTACCAAGAAGAAGGTTTTGGTCCTTGGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149864.2 |
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| CDS CAA 72 bp | CTATGGACCCTCCCGTGTCTGCTGAAATGTCACATATaGCCACAAGTTTGTGTGGTAATTCAGGACATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LWTLPCLLKCHI*PQVCVVIQDIL Trigger: AAGGATGTCCTGAATTACCACACAAACTTGTGGCAATATGTGACATTTCAGCAGACACGGGAGGGTCCATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 90 bp | TCTTGCTTGCCAACAGTCAAACTGACAGGGTTAATGTTGTATTTCTaGCTCAGCTGCTGCATTTGGTTGGTCATGTCAGAGCCTAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SCLPTVKLTGLMLYF*LSCCIWLVMSEPSV Trigger: AACACTAGGCTCTGACATGACCAACCAAATGCAGCAGCTGAGCAAGAAATACAACATTAACCCTGTCAGTTTGACTGTTGGCAAGCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031707.14 ENSMUST00000149864.2 |
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| CDS TCA 72 bp | AGACCCAAGGACCAAAACCTTCTTCTTGGTACTCATTaGAAGGAATTGAATGCGTTCTCTGCTTTCTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RPKDQNLLLGTH*KELNAFSAFSE Trigger: CTCCGAGAAAGCAGAGAACGCATTCAATTCCTTTCAATGAGTACCAAGAAGAAGGTTTTGGTCCTTGGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CCA 72 bp | GTAAAGCATGTCTCCAAAGTATTCCGTAGCCTCGATTaGAAGCTGTGCTGGCAAATTGTCAATGGAACACAT | + |
|
Preference number: 6 (lower is better) Translates to: VKHVSKVFRSLD*KLCWQIVNGTH Trigger: ATGTGTTCCATTGACAATTTGCCAGCACAGCTTCCAATCGAGGCTACGGAATACTTTGGAGACATGCTTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 72 bp | CCAACAGTCAAACTGACAGGGTTAATGTTGTATTTCTaGCTCAGCTGCTGCATTTGGTTGGTCATGTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PTVKLTGLMLYF*LSCCIWLVMSE Trigger: CTCTGACATGACCAACCAAATGCAGCAGCTGAGCAAGAAATACAACATTAACCCTGTCAGTTTGACTGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031707.14 ENSMUST00000149864.2 |
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| CDS CAA 72 bp | TCTTGCTTGCCAACAGTCAAACTGACAGGGTTAATGTaGTATTTCTTGCTCAGCTGCTGCATTTGGTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SCLPTVKLTGLM*YFLLSCCIWLV Trigger: GACCAACCAAATGCAGCAGCTGAGCAAGAAATACAACATTAACCCTGTCAGTTTGACTGTTGGCAAGCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031707.14 ENSMUST00000149864.2 |
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| CDS TCA 72 bp | GATGATGGCGACTTAACACCGTCCCATACACTTTCCTaGGGTCTCCAGTTTTTGAAACTTCTCTTAATTCGT | + |
|
Preference number: 6 (lower is better) Translates to: DDGDLTPSHTLS*GLQFLKLLLIR Trigger: ACGAATTAAGAGAAGTTTCAAAAACTGGAGACCTCAGGAAAGTGTATGGGACGGTGTTAAGTCGCCATCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS TCA 72 bp | TCTTTGGCAGTATCAATTGTTTCCATTGCCAACATGTaGTCAAGACCAGGGTCTAATCCCAACTCACCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SLAVSIVSIANM*SRPGSNPNSPM Trigger: CATTGGTGAGTTGGGATTAGACCCTGGTCTTGATCACATGTTGGCAATGGAAACAATTGATACTGCCAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS TCA 72 bp | GCATTATGTTCATCAAGACTCCCACTGGACTCCAGCTaGATTTGTATCGCAAGGGATTATCTGAATGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: ALCSSRLPLDSS*ICIARDYLNVQ Trigger: CTGAACATTCAGATAATCCCTTGCGATACAAATTCAGCTGGAGTCCAGTGGGAGTCTTGATGAACATAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS GCA 72 bp | CTGACAGGGTTAATGTTGTATTTCTTGCTCAGCTGCTaGATTTGGTTGGTCATGTCAGAGCCTAGTGTTATT | + |
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Preference number: 6 (lower is better) Translates to: LTGLMLYFLLSC*IWLVMSEPSVI Trigger: AATAACACTAGGCTCTGACATGACCAACCAAATGCAGCAGCTGAGCAAGAAATACAACATTAACCCTGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031707.14 ENSMUST00000149864.2 |
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| CDS GCA 72 bp | AAACTGACAGGGTTAATGTTGTATTTCTTGCTCAGCTaGTGCATTTGGTTGGTCATGTCAGAGCCTAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: KLTGLMLYFLLS*CIWLVMSEPSV Trigger: AACACTAGGCTCTGACATGACCAACCAAATGCAGCAGCTGAGCAAGAAATACAACATTAACCCTGTCAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031707.14 ENSMUST00000149864.2 |
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| CDS CCA 72 bp | CTGAGGTCTCCAGTTTTTGAAACTTCTCTTAATTCGTaGGGCTCCACATACTCACAAGGTAGCTCATTAAAG | + |
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Preference number: 6 (lower is better) Translates to: LRSPVFETSLNS*GSTYSQGSSLK Trigger: CTTTAATGAGCTACCTTGTGAGTATGTGGAGCCCCACGAATTAAGAGAAGTTTCAAAAACTGGAGACCTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 90 bp | ATACATAGCCAGACCCAAGGACCAAAACCTTCTTCTTGGTACTCATaGAAAGGAATTGAATGCGTTCTCTGCTTTCTCGGAGTTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: IHSQTQGPKPSSWYS*KGIECVLCFLGVSV Trigger: TACAGAAACTCCGAGAAAGCAGAGAACGCATTCAATTCCTTTCAATGAGTACCAAGAAGAAGGTTTTGGTCCTTGGGTCTGGCTATGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CCA 72 bp | TTTCCTGTTTCAGAACCTCATCCAACAGGTTCATATTaGCTTCCTGAGCTTTTATTGTGTGGGAAAAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: FPVSEPHPTGSY*LPELLLCGKRR Trigger: CCTTCTTTTCCCACACAATAAAAGCTCAGGAAGCCAATATGAACCTGTTGGATGAGGTTCTGAAACAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS TCA 72 bp | CAATGGTCTTATTTTCTAAATGTCCAGATGGATGTCTaGTGCCAAAGCTGTCCCTCATCACAATCATATCCT | + |
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Preference number: 6 (lower is better) Translates to: QWSYFLNVQMDV*CQSCPSSQSYP Trigger: AGGATATGATTGTGATGAGGGACAGCTTTGGCATCAGACATCCATCTGGACATTTAGAAAATAAGACCATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 72 bp | ATGCGTTCTCTGCTTTCTCGGAGTTTCTGTATATATTaGTATTTGTCAGTCAATAGACCATTGGACGTAATC | + |
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Preference number: 6 (lower is better) Translates to: MRSLLSRSFCIY*YLSVNRPLDVI Trigger: GATTACGTCCAATGGTCTATTGACTGACAAATACAAATATATACAGAAACTCCGAGAAAGCAGAGAACGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031707.14 |
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| CDS CAA 72 bp | TTAATGTTGTATTTCTTGCTCAGCTGCTGCATTTGGTaGGTCATGTCAGAGCCTAGTGTTATTTCTATATTG | + |
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Preference number: 6 (lower is better) Translates to: LMLYFLLSCCIW*VMSEPSVISIL Trigger: CAATATAGAAATAACACTAGGCTCTGACATGACCAACCAAATGCAGCAGCTGAGCAAGAAATACAACATTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031707.14 ENSMUST00000149864.2 |
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