Pregenerated sensors for AASDHPPT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025894Ensembl transcript IDs: ENSMUST00000051589.9, ENSMUST00000212066.2, ENSMUST00000212897.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACTGCCTAGACGCTACCATGTTTCCAGGCATAATGATAATGGACTaGACCTCTGAACCTGTAAGCCAGCCCCAATTAAATGTCCTTTAT | + |
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Preference number: 1 (lower is better) Translates to: DCLDATMFPGIMIMD*TSEPVSQPQLNVLY Trigger: ATAAAGGACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTTCAGTCCATTATCATTATGCCTGGAAACATGGTAGCGTCTAGGCAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR TCA 90 bp | GGGATATGGATTCAACGAGTCTTTCGCAAGAACCGGCTTTCCCTTTaGAGTTCTCTGCAGACGGATATGATCCCAAGGGATATTCAATTT | + |
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Preference number: 1 (lower is better) Translates to: GIWIQRVFRKNRLSL*SSLQTDMIPRDIQF Trigger: AAATTGAATATCCCTTGGGATCATATCCGTCTGCAGAGAACTTCAAAGGGAAAGCCGGTTCTTGCGAAAGACTCGTTGAATCCATATCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR GCA 90 bp | CATGATATCAATGCCAACCTGTACCTCAGGTTCTGCAGCAAGAACTaGATAGTCCCCTTGGTGAGAGATGTTAAAGTTGAAATTGGGATA | + |
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Preference number: 1 (lower is better) Translates to: HDINANLYLRFCSKN*IVPLVRDVKVEIGI Trigger: TATCCCAATTTCAACTTTAACATCTCTCACCAAGGGGACTATGCAGTTCTTGCTGCAGAACCTGAGGTACAGGTTGGCATTGATATCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR TCA 90 bp | TTCGCAAGAACCGGCTTTCCCTTTGAAGTTCTCTGCAGACGGATATaGTCCCAAGGGATATTCAATTTCTCTGCAACTAATTTCCTTATC | + |
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Preference number: 1 (lower is better) Translates to: FARTGFPFEVLCRRI*SQGIFNFSATNFLI Trigger: GATAAGGAAATTAGTTGCAGAGAAATTGAATATCCCTTGGGATCATATCCGTCTGCAGAGAACTTCAAAGGGAAAGCCGGTTCTTGCGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR GCA 90 bp | AAAACTAGTCTTCATGATATCAATGCCAACCTGTACCTCAGGTTCTaGAGCAAGAACTGCATAGTCCCCTTGGTGAGAGATGTTAAAGTT | + |
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Preference number: 1 (lower is better) Translates to: KTSLHDINANLYLRF*SKNCIVPLVRDVKV Trigger: AACTTTAACATCTCTCACCAAGGGGACTATGCAGTTCTTGCTGCAGAACCTGAGGTACAGGTTGGCATTGATATCATGAAGACTAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR TCA 90 bp | GATTCTGTCATTGTTTCTAATAATTACAGTTCTGGAAGGAAGAAGTaGGCATACTCAATGGAGCCAATGGAGCCACTGAACTGGAAATCT | + |
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Preference number: 1 (lower is better) Translates to: DSVIVSNNYSSGRKK*AYSMEPMEPLNWKS Trigger: AGATTTCCAGTTCAGTGGCTCCATTGGCTCCATTGAGTATGCTCACTTCTTCCTTCCAGAACTGTAATTATTAGAAACAATGACAGAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR TCA 90 bp | GACCCTCCTCCTAACCACTTGGGAGCCAGTCTTCTCCTACCTTCTTTTGGAACATCTGGAAGGAAGAAGTaGGCATACTCAATGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: DPPPNHLGASLLLPSFGTSGRKK*AYSMEP Trigger: TGGCTCCATTGAGTATGCTCACTTCTTCCTTCCAGA...TGTTCCAAAAGAAGGTAGGAGAAGACTGGCTCCCAAGTGGTTAGGAGGAGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAACAGCAGTTTGTGTTACTACAGTCAAGGCAAAATGAGTGTTGCAATGTTGTGTGGGGATGGGCTTTaGGACCCTCCTCCTAACCAC | + |
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Preference number: 2 (lower is better) Translates to: LNSSLCYYSQGKMSVAMLCGDGL*DPPPNH Trigger: GTGGTTAGGAGGAGGGTCTCAAAGCCCATCCCCACA...CAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACACAAACTGCTGTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR TCA 90 bp | CCACTTGGGAGCCAGTCTTCTCCTACCTTCTTTTGGAACAAGAGATACAACTCTAACCGGCTTTCCCTTTaGAGTTCTCTGCAGACGGAT | + |
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Preference number: 2 (lower is better) Translates to: PLGSQSSPTFFWNKRYNSNRLSL*SSLQTD Trigger: ATCCGTCTGCAGAGAACTTCAAAGGGAAAGCCGGTT...AGAGTTGTATCTCTTGTTCCAAAAGAAGGTAGGAGAAGACTGGCTCCCAAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR GCA 90 bp | GACCCTCCTCCTAACCACTTGGGAGCCAGTCTTCTCCTACCTTCTTTTGGAACACTTCCTAACAGCCACTaGAACAAAATGGTGTTCATC | + |
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Preference number: 2 (lower is better) Translates to: DPPPNHLGASLLLPSFGTLPNSH*NKMVFI Trigger: GATGAACACCATTTTGTTGCAGTGGCTGTTAGGAAG...TGTTCCAAAAGAAGGTAGGAGAAGACTGGCTCCCAAGTGGTTAGGAGGAGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCAACCACAGTAGTGTGATGTCAATGAAACTCTCCCAAACCATACCAGGTCTCCTCCTAACCACTTaGGAGCCAGTCTTCTCCTAC | + |
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Preference number: 2 (lower is better) Translates to: FLNHSSVMSMKLSQTIPGLLLTT*EPVFSY Trigger: GTAGGAGAAGACTGGCTCCCAAGTGGTTAGGAGGAG...ACCTGGTATGGTTTGGGAGAGTTTCATTGACATCACACTACTGTGGTTGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTAGAGTAGGTATGGTCTTGTTGGAGGAAGTATGTCATTGTGGGGATGGGCTCCTCCTAACCACTTaGGAGCCAGTCTTCTCCTAC | + |
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Preference number: 2 (lower is better) Translates to: FVRVGMVLLEEVCHCGDGLLLTT*EPVFSY Trigger: GTAGGAGAAGACTGGCTCCCAAGTGGTTAGGAGGAG...CCCATCCCCACAATGACATACTTCCTCCAACAAGACCATACCTACTCTAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAGCCAGCCCCAATTAAATGTCCTTTATAAGAGCTGCCATGGTTGTGGTGTCGGAAGTATGTCATTGTaGGGATGGGCTTTGAGACCC | + |
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Preference number: 2 (lower is better) Translates to: VSQPQLNVLYKSCHGCGVGSMSL*GWALRP Trigger: GGGTCTCAAAGCCCATCCCCACAATGACATACTTCC...GACACCACAACCATGGCAGCTCTTATAAAGGACATTTAATTGGGGCTGGCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR TCA 90 bp | CCTAACCACTTGGGAGCCAGTCTTCTCCTACCTTCTTTTGGAACAAGAGATACATCTGGAAGGAAGAAGTaGGCATACTCAATGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PNHLGASLLLPSFGTRDTSGRKK*AYSMEP Trigger: TGGCTCCATTGAGTATGCTCACTTCTTCCTTCCAGA...TGTATCTCTTGTTCCAAAAGAAGGTAGGAGAAGACTGGCTCCCAAGTGGTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATGACTCTCAAAATGCCACATTTTCACTGTAGTACTGCTTACAGTAATGACTGTGGGGATGGGCTTTaGGACCCTCCTCCTAACCAC | + |
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Preference number: 2 (lower is better) Translates to: TMTLKMPHFHCSTAYSNDCGDGL*DPPPNH Trigger: GTGGTTAGGAGGAGGGTCTCAAAGCCCATCCCCACA...GTCATTACTGTAAGCAGTACTACAGTGAAAATGTGGCATTTTGAGAGTCATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR GCA 90 bp | GGCACTATTAGGTGTGGCTTTGTTAGAGTAGGTATGGTCTTGTTGGAGGAAGTACTGTACCTCAGGTTCTaGAGCAAGAACTGCATAGTC | + |
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Preference number: 2 (lower is better) Translates to: GTIRCGFVRVGMVLLEEVLYLRF*SKNCIV Trigger: GACTATGCAGTTCTTGCTGCAGAACCTGAGGTACAG...TACTTCCTCCAACAAGACCATACCTACTCTAACAAAGCCACACCTAATAGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR GCA 90 bp | GTAAGCCAGCCCCAATTAAATGTCCTTTATAAGAGCTGCCATGGTTGTGGTGTCGAAGCTTTCTTTCAGTaGCCAGTGCCGGTAAAACAT | + |
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Preference number: 2 (lower is better) Translates to: VSQPQLNVLYKSCHGCGVEAFFQ*PVPVKH Trigger: ATGTTTTACCGGCACTGGGCACTGAAAGAAAGCTTC...GACACCACAACCATGGCAGCTCTTATAAAGGACATTTAATTGGGGCTGGCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212066.2 |
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| 3UTR CAA 90 bp | TGGGATATGGATTCAACGAGTCTTTCGCAAGAACCGGCTTTCCCTTaGAAGTTCTCTGCAGACGGATATGATCCCAAGGGATATTCAATT | + |
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Preference number: 2 (lower is better) Translates to: WDMDSTSLSQEPAFP*KFSADGYDPKGYSI Trigger: AATTGAATATCCCTTGGGATCATATCCGTCTGCAGAGAACTTCAAAGGGAAAGCCGGTTCTTGCGAAAGACTCGTTGAATCCATATCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR TCA 90 bp | GGCACTATTAGGTGTGGCTTTGTTAGAGTAGGTATGGTCTTGTTGGAGGAAGTACTCTGCAGACGGATATaGTCCCAAGGGATATTCAAT | + |
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Preference number: 2 (lower is better) Translates to: GTIRCGFVRVGMVLLEEVLCRRI*SQGIFN Trigger: ATTGAATATCCCTTGGGATCATATCCGTCTGCAGAG...TACTTCCTCCAACAAGACCATACCTACTCTAACAAAGCCACACCTAATAGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR TCA 90 bp | GTAAGCCAGCCCCAATTAAATGTCCTTTATAAGAGCTGCCATGGTTGTGGTGTCAAAACAGTCCCAAAATaGAGGATCCTCAGGTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: VSQPQLNVLYKSCHGCGVKTVPK*RILRCH Trigger: ATGACACCTGAGGATCCTTCATTTTGGGACTGTTTT...GACACCACAACCATGGCAGCTCTTATAAAGGACATTTAATTGGGGCTGGCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAACAGCAGTTTGTGTTACTACAGTCAAGGCAAAATGAGTGTTGCAATGTTGGAGCTGCCATGGTTGTaGTGTCTCTTCGCAGTAATG | + |
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Preference number: 2 (lower is better) Translates to: LNSSLCYYSQGKMSVAMLELPWL*CLFAVM Trigger: CATTACTGCGAAGAGACACCACAACCATGGCAGCTC...CAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACACAAACTGCTGTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR CCA 90 bp | GTGATGTCAATGAAACTCTCCCAAACCATACCAGGTATAACTGGTTTGAATATGATGTCATTGTGGGGATaGGCTTTGAGACCCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: VMSMKLSQTIPGITGLNMMSLWG*ALRPSS Trigger: GGAGGAGGGTCTCAAAGCCCATCCCCACAATGACAT...CATATTCAAACCAGTTATACCTGGTATGGTTTGGGAGAGTTTCATTGACATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR CAA 90 bp | GTGATGTCAATGAAACTCTCCCAAACCATACCAGGTATAACTGGTTaGAATATGCTTGGCCCAGGAAATGGCACTATTAGGTGTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: VMSMKLSQTIPGITG*NMLGPGNGTIRCGF Trigger: AAAGCCACACCTAATAGTGCCATTTCCTGGGCCAAGCATATTCAAACCAGTTATACCTGGTATGGTTTGGGAGAGTTTCATTGACATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAACAGCAGTTTGTGTTACTACAGTCAAGGCAAAATGAGTGTTGCAATGTTGTCTGGAAGGAAGAAGTaGGCATACTCAATGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LNSSLCYYSQGKMSVAMLSGRKK*AYSMEP Trigger: TGGCTCCATTGAGTATGCTCACTTCTTCCTTCCAGA...CAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACACAAACTGCTGTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR TCA 90 bp | AATCCAACTCCAATGGCTTTTATGAAGCTTTCTTTCAGTGCCTGGAAAACTAGTAACCGGCTTTCCCTTTaGAGTTCTCTGCAGACGGAT | + |
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Preference number: 2 (lower is better) Translates to: NPTPMAFMKLSFSAWKTSNRLSL*SSLQTD Trigger: ATCCGTCTGCAGAGAACTTCAAAGGGAAAGCCGGTT...ACTAGTTTTCCAGGCACTGAAAGAAAGCTTCATAAAAGCCATTGGAGTTGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212897.2 |
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| 3UTR-3UTR TCA 90 bp | ATAATTACAGTTCTGGAAGGAAGAAGTGAGCATACTCAATGGAGCCAATGGAGCCTCCAATGGCTTTTATaGAGCTTTCTTTCAGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: IITVLEGRSEHTQWSQWSLQWLL*SFLSVP Trigger: GGGCACTGAAAGAAAGCTTCATAAAAGCCATTGGAG...GCTCCATTGGCTCCATTGAGTATGCTCACTTCTTCCTTCCAGAACTGTAATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212066.2 |
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| 3UTR-3UTR GCA 90 bp | GTAAGCCAGCCCCAATTAAATGTCCTTTATAAGAGCTGCCATGGTTGTGGTGTCTCAAATTCAAGCCGCTaGATTTCAAATCCCAATCCA | + |
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Preference number: 2 (lower is better) Translates to: VSQPQLNVLYKSCHGCGVSNSSR*ISNPNP Trigger: TGGATTGGGATTTGAAATGCAGCGGCTTGAATTTGA...GACACCACAACCATGGCAGCTCTTATAAAGGACATTTAATTGGGGCTGGCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGCCCCAATTAAATGTCCTTTATAAGAGCTGCCATGGTTGTGGTGTCTCTTCAAATTCAAGCCGCTaGATTTCAAATCCCAATCCA | + |
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Preference number: 2 (lower is better) Translates to: SQPQLNVLYKSCHGCGVSSNSSR*ISNPNP Trigger: TGGATTGGGATTTGAAATGCAGCGGCTTGAATTTGA...AGAGACACCACAACCATGGCAGCTCTTATAAAGGACATTTAATTGGGGCTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR CCA 90 bp | TATGAAGATATAAACCTGGAAGTCTCAACAGCAGTTTGTGTTACTACAGTCAAGCTCCTCCTAACCACTTaGGAGCCAGTCTTCTCCTAC | + |
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Preference number: 2 (lower is better) Translates to: YEDINLEVSTAVCVTTVKLLLTT*EPVFSY Trigger: GTAGGAGAAGACTGGCTCCCAAGTGGTTAGGAGGAG...CTTGACTGTAGTAACACAAACTGCTGTTGAGACTTCCAGGTTTATATCTTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR TCA 90 bp | ATAATTACAGTTCTGGAAGGAAGAAGTGAGCATACTCAATGGAGCCAATGGAGCAAAACAGTCCCAAAATaGAGGATCCTCAGGTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: IITVLEGRSEHTQWSQWSKTVPK*RILRCH Trigger: ATGACACCTGAGGATCCTTCATTTTGGGACTGTTTT...GCTCCATTGGCTCCATTGAGTATGCTCACTTCTTCCTTCCAGAACTGTAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR CCA 90 bp | TATGAAGATATAAACCTGGAAGTCTCAACAGCAGTTTGTGTTACTACAGTCAAGGAGCTGCCATGGTTGTaGTGTCTCTTCGCAGTAATG | + |
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Preference number: 2 (lower is better) Translates to: YEDINLEVSTAVCVTTVKELPWL*CLFAVM Trigger: CATTACTGCGAAGAGACACCACAACCATGGCAGCTC...CTTGACTGTAGTAACACAAACTGCTGTTGAGACTTCCAGGTTTATATCTTCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR CCA 90 bp | TATGAAGATATAAACCTGGAAGTCTCAACAGCAGTTTGTGTTACTACAGTCAAGGGAAGTATGTCATTGTaGGGATGGGCTTTGAGACCC | + |
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Preference number: 2 (lower is better) Translates to: YEDINLEVSTAVCVTTVKGSMSL*GWALRP Trigger: GGGTCTCAAAGCCCATCCCCACAATGACATACTTCC...CTTGACTGTAGTAACACAAACTGCTGTTGAGACTTCCAGGTTTATATCTTCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR GCA 90 bp | TATGAAGATATAAACCTGGAAGTCTCAACAGCAGTTTGTGTTACTACAGTCAAGTTCTGCAGCAAGAACTaGATAGTCCCCTTGGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: YEDINLEVSTAVCVTTVKFCSKN*IVPLVR Trigger: TCTCACCAAGGGGACTATGCAGTTCTTGCTGCAGAA...CTTGACTGTAGTAACACAAACTGCTGTTGAGACTTCCAGGTTTATATCTTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTATAAGAGCTGCCATGGTTGTGGTGTCTCTTCGCAGTAATGAAACCCTAATGGTAAACTTCCTCTaGGATAGCTTAGAATCATCT | + |
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Preference number: 2 (lower is better) Translates to: SFIRAAMVVVSLRSNETLMVNFL*DSLESS Trigger: AGATGATTCTAAGCTATCCCAGAGGAAGTTTACCAT...TAGGGTTTCATTACTGCGAAGAGACACCACAACCATGGCAGCTCTTATAAAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTTTGTGTTACTACAGTCAAGGCAAAATGAGTGTTGCAATGTTGATACCTTACTCTGCAGACGGATATaGTCCCAAGGGATATTCAAT | + |
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Preference number: 2 (lower is better) Translates to: QFVLLQSRQNECCNVDTLLCRRI*SQGIFN Trigger: ATTGAATATCCCTTGGGATCATATCCGTCTGCAGAG...TAAGGTATCAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACACAAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR TCA 90 bp | GTGATGTCAATGAAACTCTCCCAAACCATACCAGGTATAACTGGTTTGAATATGAAAGAATTCTGGAATTaGACCACGACCTGGAAAACT | + |
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Preference number: 2 (lower is better) Translates to: VMSMKLSQTIPGITGLNMKEFWN*TTTWKT Trigger: AGTTTTCCAGGTCGTGGTTCAATTCCAGAATTCTTT...CATATTCAAACCAGTTATACCTGGTATGGTTTGGGAGAGTTTCATTGACATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212066.2 |
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| 3UTR-3UTR GCA 90 bp | ATAATTACAGTTCTGGAAGGAAGAAGTGAGCATACTCAATGGAGCCAATGGAGCAGGCAAAATGAGTGTTaGAATGTTGATACCTTAAAC | + |
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Preference number: 2 (lower is better) Translates to: IITVLEGRSEHTQWSQWSRQNEC*NVDTLN Trigger: GTTTAAGGTATCAACATTGCAACACTCATTTTGCCT...GCTCCATTGGCTCCATTGAGTATGCTCACTTCTTCCTTCCAGAACTGTAATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR GCA 90 bp | ACAATGACTCTCAAAATGCCACATTTTCACTGTAGTACTGCTTACAGTAATGACCTTCCTAACAGCCACTaGAACAAAATGGTGTTCATC | + |
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Preference number: 2 (lower is better) Translates to: TMTLKMPHFHCSTAYSNDLPNSH*NKMVFI Trigger: GATGAACACCATTTTGTTGCAGTGGCTGTTAGGAAG...GTCATTACTGTAAGCAGTACTACAGTGAAAATGTGGCATTTTGAGAGTCATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAACAGCAGTTTGTGTTACTACAGTCAAGGCAAAATGAGTGTTGCAATGTTGGCCACTGCAACAAAATaGTGTTCATCTATTTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: LNSSLCYYSQGKMSVAMLATATK*CSSILL Trigger: AAGCAAAATAGATGAACACCATTTTGTTGCAGTGGC...CAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACACAAACTGCTGTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR CCA 90 bp | ACAATGACTCTCAAAATGCCACATTTTCACTGTAGTACTGCTTACAGTAATGACGTTGAAATTGGGATATaGATTCAACGAGTCTTTCGC | + |
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Preference number: 2 (lower is better) Translates to: TMTLKMPHFHCSTAYSNDVEIGI*IQRVFR Trigger: GCGAAAGACTCGTTGAATCCATATCCCAATTTCAAC...GTCATTACTGTAAGCAGTACTACAGTGAAAATGTGGCATTTTGAGAGTCATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTACTACAGTCAAGGCAAAATGAGTGTTGCAATGTTGATACCTTAAACAGAGTTGAAATTGGGATATaGATTCAACGAGTCTTTCGC | + |
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Preference number: 2 (lower is better) Translates to: VLLQSRQNECCNVDTLNRVEIGI*IQRVFR Trigger: GCGAAAGACTCGTTGAATCCATATCCCAATTTCAAC...TCTGTTTAAGGTATCAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR CCA 90 bp | GTGATGTCAATGAAACTCTCCCAAACCATACCAGGTATAACTGGTTTGAATATGATGGTAAACTTCCTCTaGGATAGCTTAGAATCATCT | + |
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Preference number: 2 (lower is better) Translates to: VMSMKLSQTIPGITGLNMMVNFL*DSLESS Trigger: AGATGATTCTAAGCTATCCCAGAGGAAGTTTACCAT...CATATTCAAACCAGTTATACCTGGTATGGTTTGGGAGAGTTTCATTGACATCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR-3UTR GCA 90 bp | GTGATGTCAATGAAACTCTCCCAAACCATACCAGGTATAACTGGTTTGAATATGAGGCAAAATGAGTGTTaGAATGTTGATACCTTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: VMSMKLSQTIPGITGLNMRQNEC*NVDTLN Trigger: GTTTAAGGTATCAACATTGCAACACTCATTTTGCCT...CATATTCAAACCAGTTATACCTGGTATGGTTTGGGAGAGTTTCATTGACATCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR CAA 90 bp | AAAAAGAGCAATAAGGTAATACCTAAAGCTATTTGTTTAAACCCTTaGAACCAATCACTCCTGTCTGCAGGACATAACAATGACTCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: KKSNKVIPKAICLNP*NQSLLSAGHNNDSQ Trigger: TTGAGAGTCATTGTTATGTCCTGCAGACAGGAGTGATTGGTTCAAAGGGTTTAAACAAATAGCTTTAGGTATTACCTTATTGCTCTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAAAGATAACAGAAAGTTTAGAGTTCTCTGAAAAACAAGGTGAAATGCTTGCCAGGCAAAATGAGTGTTaGAATGTTGATACCTTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: GKITESLEFSEKQGEMLARQNEC*NVDTLN Trigger: GTTTAAGGTATCAACATTGCAACACTCATTTTGCCT...GGCAAGCATTTCACCTTGTTTTTCAGAGAACTCTAAACTTTCTGTTATCTTTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR TCA 72 bp | TTGTTGGAGGAAGTATGTCATTGTGGGGATGGGCTTTaGGACCCTCCTCCTAACCACTTGGGAGCCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLEEVCHCGDGL*DPPPNHLGASL Trigger: AAGACTGGCTCCCAAGTGGTTAGGAGGAGGGTCTCAAAGCCCATCCCCACAATGACATACTTCCTCCAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR TCA 72 bp | GAACAAGAGATACAACTCTCCGCTCCTTCTGGGCCATaGCTGCCTAGACGCTACCATGTTTCCAGGCATAAT | + |
|
Preference number: 3 (lower is better) Translates to: EQEIQLSAPSGP*LPRRYHVSRHN Trigger: ATTATGCCTGGAAACATGGTAGCGTCTAGGCAGTCATGGCCCAGAAGGAGCGGAGAGTTGTATCTCTTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACTTGGGAGCCAGTCTTCTCCTACCTTCTTTTGGAACAAGAGATACAACTCTGAACCGGCTTTCCCTTaGAAGTTCTCTGCAGACGGA | + |
|
Preference number: 3 (lower is better) Translates to: PLGSQSSPTFFWNKRYNSEPAFP*KFSADG Trigger: TCCGTCTGCAGAGAACTTCAAAGGGAAAGCCGGTTC...AGAGTTGTATCTCTTGTTCCAAAAGAAGGTAGGAGAAGACTGGCTCCCAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR GCA 72 bp | CTTCATGATATCAATGCCAACCTGTACCTCAGGTTCTaGAGCAAGAACTGCATAGTCCCCTTGGTGAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LHDINANLYLRF*SKNCIVPLVRD Trigger: ATCTCTCACCAAGGGGACTATGCAGTTCTTGCTGCAGAACCTGAGGTACAGGTTGGCATTGATATCATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGCCAGCCCCAATTAAATGTCCTTTATAAGAGCTGCCATGGTTGTGGTGTCGTAGGTATGGTCTTGTaGGAGGAAGTATGTCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: VSQPQLNVLYKSCHGCGVVGMVL*EEVCHC Trigger: ACAATGACATACTTCCTCCAACAAGACCATACCTAC...GACACCACAACCATGGCAGCTCTTATAAAGGACATTTAATTGGGGCTGGCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGCCAGCCCCAATTAAATGTCCTTTATAAGAGCTGCCATGGTTGTGGTGTCAACTGCATAGTCCCCTaGGTGAGAGATGTTAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: VSQPQLNVLYKSCHGCGVNCIVP*VRDVKV Trigger: AACTTTAACATCTCTCACCAAGGGGACTATGCAGTT...GACACCACAACCATGGCAGCTCTTATAAAGGACATTTAATTGGGGCTGGCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGCCAGCCCCAATTAAATGTCCTTTATAAGAGCTGCCATGGTTGTGGTGTCTGGTGTTCATCTATTTaGCTTTCCTCAAAGGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VSQPQLNVLYKSCHGCGVWCSSI*LSSKAH Trigger: ATGGGCCTTTGAGGAAAGCAAAATAGATGAACACCA...GACACCACAACCATGGCAGCTCTTATAAAGGACATTTAATTGGGGCTGGCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR CCA 72 bp | GATCCATCAGGCTTCCTAACAGCCACTGCAACAAAATaGTGTTCATCTATTTTGCTTTCCTCAAAGGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: DPSGFLTATATK*CSSILLSSKAH Trigger: ATGGGCCTTTGAGGAAAGCAAAATAGATGAACACCATTTTGTTGCAGTGGCTGTTAGGAAGCCTGATGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGCCAGCCCCAATTAAATGTCCTTTATAAGAGCTGCCATGGTTGTGGTGTCTTCTCCTACCTTCTTTaGGAACAAGAGATACAACTC | + |
|
Preference number: 3 (lower is better) Translates to: VSQPQLNVLYKSCHGCGVFSYLL*EQEIQL Trigger: GAGTTGTATCTCTTGTTCCAAAAGAAGGTAGGAGAA...GACACCACAACCATGGCAGCTCTTATAAAGGACATTTAATTGGGGCTGGCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAATGACTCTCAAAATGCCACATTTTCACTGTAGTACTGCTTACAGTAATGACGAACCGGCTTTCCCTTaGAAGTTCTCTGCAGACGGA | + |
|
Preference number: 3 (lower is better) Translates to: TMTLKMPHFHCSTAYSNDEPAFP*KFSADG Trigger: TCCGTCTGCAGAGAACTTCAAAGGGAAAGCCGGTTC...GTCATTACTGTAAGCAGTACTACAGTGAAAATGTGGCATTTTGAGAGTCATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCACTATTAGGTGTGGCTTTGTTAGAGTAGGTATGGTCTTGTTGGAGGAAGTAGAAAGAATTCTGGAATaGAACCACGACCTGGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GTIRCGFVRVGMVLLEEVERILE*NHDLEN Trigger: GTTTTCCAGGTCGTGGTTCAATTCCAGAATTCTTTC...TACTTCCTCCAACAAGACCATACCTACTCTAACAAAGCCACACCTAATAGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212066.2 |
||
| 3UTR TCA 72 bp | ACCGGCTTTCCCTTTGAAGTTCTCTGCAGACGGATATaGTCCCAAGGGATATTCAATTTCTCTGCAACTAAT | + |
|
Preference number: 3 (lower is better) Translates to: TGFPFEVLCRRI*SQGIFNFSATN Trigger: ATTAGTTGCAGAGAAATTGAATATCCCTTGGGATCATATCCGTCTGCAGAGAACTTCAAAGGGAAAGCCGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAACAGCAGTTTGTGTTACTACAGTCAAGGCAAAATGAGTGTTGCAATGTTGAGTCTCAACAGCAGTTaGTGTTACTACAGTCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LNSSLCYYSQGKMSVAMLSLNSS*CYYSQG Trigger: GCCTTGACTGTAGTAACACAAACTGCTGTTGAGACT...CAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACACAAACTGCTGTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTAACCACTTGGGAGCCAGTCTTCTCCTACCTTCTTTTGGAACAAGAGATACAATTTGTTTAAACCCTTaGAACCAATCACTCCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PNHLGASLLLPSFGTRDTICLNP*NQSLLS Trigger: AGACAGGAGTGATTGGTTCAAAGGGTTTAAACAAAT...TGTATCTCTTGTTCCAAAAGAAGGTAGGAGAAGACTGGCTCCCAAGTGGTTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCACTATTAGGTGTGGCTTTGTTAGAGTAGGTATGGTCTTGTTGGAGGAAGTAGATGCACATTTATCCTaGGAAGATTCTGTCATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GTIRCGFVRVGMVLLEEVDAHLS*EDSVIV Trigger: AACAATGACAGAATCTTCCAAGGATAAATGTGCATC...TACTTCCTCCAACAAGACCATACCTACTCTAACAAAGCCACACCTAATAGTGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAATTACAGTTCTGGAAGGAAGAAGTGAGCATACTCAATGGAGCCAATGGAGCGATGCACATTTATCCTaGGAAGATTCTGTCATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: IITVLEGRSEHTQWSQWSDAHLS*EDSVIV Trigger: AACAATGACAGAATCTTCCAAGGATAAATGTGCATC...GCTCCATTGGCTCCATTGAGTATGCTCACTTCTTCCTTCCAGAACTGTAATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAGATAACAGAAAGTTTAGAGTTCTCTGAAAAACAAGGTGAAATGCTTGCCAGTCTCAACAGCAGTTaGTGTTACTACAGTCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GKITESLEFSEKQGEMLASLNSS*CYYSQG Trigger: GCCTTGACTGTAGTAACACAAACTGCTGTTGAGACT...GGCAAGCATTTCACCTTGTTTTTCAGAGAACTCTAAACTTTCTGTTATCTTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | TATGAAGATATAAACCTGGAAGTCTCAACAGCAGTTTGTGTTACTACAGTCAAGGTAGGTATGGTCTTGTaGGAGGAAGTATGTCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: YEDINLEVSTAVCVTTVKVGMVL*EEVCHC Trigger: ACAATGACATACTTCCTCCAACAAGACCATACCTAC...CTTGACTGTAGTAACACAAACTGCTGTTGAGACTTCCAGGTTTATATCTTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | TATGAAGATATAAACCTGGAAGTCTCAACAGCAGTTTGTGTTACTACAGTCAAGAGAGTAGGTATGGTCTaGTTGGAGGAAGTATGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: YEDINLEVSTAVCVTTVKRVGMV*LEEVCH Trigger: ATGACATACTTCCTCCAACAAGACCATACCTACTCT...CTTGACTGTAGTAACACAAACTGCTGTTGAGACTTCCAGGTTTATATCTTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTACTACAGTCAAGGCAAAATGAGTGTTGCAATGTTGATACCTTAAACAGAAGAGTAGGTATGGTCTaGTTGGAGGAAGTATGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VLLQSRQNECCNVDTLNRRVGMV*LEEVCH Trigger: ATGACATACTTCCTCCAACAAGACCATACCTACTCT...TCTGTTTAAGGTATCAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAATGACTCTCAAAATGCCACATTTTCACTGTAGTACTGCTTACAGTAATGACAACTGCATAGTCCCCTaGGTGAGAGATGTTAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TMTLKMPHFHCSTAYSNDNCIVP*VRDVKV Trigger: AACTTTAACATCTCTCACCAAGGGGACTATGCAGTT...GTCATTACTGTAAGCAGTACTACAGTGAAAATGTGGCATTTTGAGAGTCATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAACAGCAGTTTGTGTTACTACAGTCAAGGCAAAATGAGTGTTGCAATGTTGGAATCCTATCATGACTaGGTACCATTTCGTATTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LNSSLCYYSQGKMSVAMLESYHD*VPFRIR Trigger: TCTAATACGAAATGGTACCAAGTCATGATAGGATTC...CAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACACAAACTGCTGTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | TATGAAGATATAAACCTGGAAGTCTCAACAGCAGTTTGTGTTACTACAGTCAAGGATGCACATTTATCCTaGGAAGATTCTGTCATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: YEDINLEVSTAVCVTTVKDAHLS*EDSVIV Trigger: AACAATGACAGAATCTTCCAAGGATAAATGTGCATC...CTTGACTGTAGTAACACAAACTGCTGTTGAGACTTCCAGGTTTATATCTTCATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAGATAACAGAAAGTTTAGAGTTCTCTGAAAAACAAGGTGAAATGCTTGCCGAATCCTATCATGACTaGGTACCATTTCGTATTAGA | + |
|
Preference number: 3 (lower is better) Translates to: GKITESLEFSEKQGEMLAESYHD*VPFRIR Trigger: TCTAATACGAAATGGTACCAAGTCATGATAGGATTC...GGCAAGCATTTCACCTTGTTTTTCAGAGAACTCTAAACTTTCTGTTATCTTTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR GCA 72 bp | CAGTTTGTGTTACTACAGTCAAGGCAAAATGAGTGTTaGAATGTTGATACCTTAAACAGATGTCATACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: QFVLLQSRQNEC*NVDTLNRCHTR Trigger: TCTTGTATGACATCTGTTTAAGGTATCAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACACAAACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| CDS-3UTR CCA 90 bp | GACCCTCCTCCTAACCACTTGGGAGCCAGTCTTCTCCTACCTTCTTTTGGAACAAACGAACGCCCTCCATaGATGGCACCACGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DPPPNHLGASLLLPSFGTNERPP*MAPRTA Trigger: GGCTGTGCGTGGTGCCATCCATGGAGGGCGTTCGTT...TGTTCCAAAAGAAGGTAGGAGAAGACTGGCTCCCAAGTGGTTAGGAGGAGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| CDS-3UTR GCA 90 bp | GACCCTCCTCCTAACCACTTGGGAGCCAGTCTTCTCCTACCTTCTTTTGGAACAACACGAACTTGCCGATaGGCTCCTTCTCCTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPPPNHLGASLLLPSFGTTRTCR*APSPPA Trigger: AGCCGGAGGAGAAGGAGCGCATCGGCAAGTTCGTGT...TGTTCCAAAAGAAGGTAGGAGAAGACTGGCTCCCAAGTGGTTAGGAGGAGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
||
| CDS-3UTR GCA 90 bp | GACCCTCCTCCTAACCACTTGGGAGCCAGTCTTCTCCTACCTTCTTTTGGAACAGGGCAAACACGAACTTaGCGATGCGCTCCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DPPPNHLGASLLLPSFGTGQTRT*RCAPSP Trigger: AGGAGAAGGAGCGCATCGGCAAGTTCGTGTTTGCCC...TGTTCCAAAAGAAGGTAGGAGAAGACTGGCTCCCAAGTGGTTAGGAGGAGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
||
| CDS-3UTR CCA 90 bp | CCACTTGGGAGCCAGTCTTCTCCTACCTTCTTTTGGAACAAGAGATACAACTCTCCATTCGGCTCGACTTaGCAGCCAGGTACCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLGSQSSPTFFWNKRYNSPFGST*QPGTAG Trigger: TCCTGCGGTACCTGGCTGCCAAGTCGAGCCGAATGG...AGAGTTGTATCTCTTGTTCCAAAAGAAGGTAGGAGAAGACTGGCTCCCAAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTTATAAGAGCTGCCATGGTTGTGGTGTCTCTTCGCAGTAATGAAACCCTACAGCCAAGGCTGCCTTaGCGTCGCGGGCAAACACGA | + |
|
Preference number: 4 (lower is better) Translates to: SFIRAAMVVVSLRSNETLQPRLP*RRGQTR Trigger: TCGTGTTTGCCCGCGACGCCAAGGCAGCCTTGGCTG...TAGGGTTTCATTACTGCGAAGAGACACCACAACCATGGCAGCTCTTATAAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
||
| CDS-3UTR CCA 90 bp | CCTAACCACTTGGGAGCCAGTCTTCTCCTACCTTCTTTTGGAACAAGAGATACAAACGCCCTCCATGGATaGCACCACGCACAGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PNHLGASLLLPSFGTRDTNALHG*HHAQPL Trigger: AAGAGGCTGTGCGTGGTGCCATCCATGGAGGGCGTT...TGTATCTCTTGTTCCAAAAGAAGGTAGGAGAAGACTGGCTCCCAAGTGGTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR CAA 72 bp | CTAACCACTTGGGAGCCAGTCTTCTCCTACCTTCTTTaGGAACAAGAGATACAACTCTCCGCTCCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTTWEPVFSYLL*EQEIQLSAPSG Trigger: CCCAGAAGGAGCGGAGAGTTGTATCTCTTGTTCCAAAAGAAGGTAGGAGAAGACTGGCTCCCAAGTGGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| CDS-3UTR CCA 90 bp | TCCATCAGGCTTCCTAACAGCCACTGCAACAAAATGGTGTTCATCTATTTTGCTAACGCCCTCCATGGATaGCACCACGCACAGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SIRLPNSHCNKMVFIYFANALHG*HHAQPL Trigger: AAGAGGCTGTGCGTGGTGCCATCCATGGAGGGCGTT...AGCAAAATAGATGAACACCATTTTGTTGCAGTGGCTGTTAGGAAGCCTGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| 3UTR CAA 72 bp | GATTCAACGAGTCTTTCGCAAGAACCGGCTTTCCCTTaGAAGTTCTCTGCAGACGGATATGATCCCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSTSLSQEPAFP*KFSADGYDPKG Trigger: TCCCTTGGGATCATATCCGTCTGCAGAGAACTTCAAAGGGAAAGCCGGTTCTTGCGAAAGACTCGTTGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| CDS-3UTR CCA 90 bp | GTGATGTCAATGAAACTCTCCCAAACCATACCAGGTATAACTGGTTTGAATATGCCATTCGGCTCGACTTaGCAGCCAGGTACCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VMSMKLSQTIPGITGLNMPFGST*QPGTAG Trigger: TCCTGCGGTACCTGGCTGCCAAGTCGAGCCGAATGG...CATATTCAAACCAGTTATACCTGGTATGGTTTGGGAGAGTTTCATTGACATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| CDS-3UTR TCA 90 bp | GGCACTATTAGGTGTGGCTTTGTTAGAGTAGGTATGGTCTTGTTGGAGGAAGTAAACCGGCTTTCCCTTTaGAGTTCTCTGCAGACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GTIRCGFVRVGMVLLEEVNRLSL*SSLQTD Trigger: ATCCGTCTGCAGAGAACTTCAAAGGGAAAGCCGGTT...TACTTCCTCCAACAAGACCATACCTACTCTAACAAAGCCACACCTAATAGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
||
| CDS-3UTR GCA 90 bp | GTAAGCCAGCCCCAATTAAATGTCCTTTATAAGAGCTGCCATGGTTGTGGTGTCCTGTACCTCAGGTTCTaGAGCAAGAACTGCATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSQPQLNVLYKSCHGCGVLYLRF*SKNCIV Trigger: GACTATGCAGTTCTTGCTGCAGAACCTGAGGTACAG...GACACCACAACCATGGCAGCTCTTATAAAGGACATTTAATTGGGGCTGGCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
||
| CDS-3UTR CCA 90 bp | GGAAAGATAACAGAAAGTTTAGAGTTCTCTGAAAAACAAGGTGAAATGCTTGCCAACGAACGCCCTCCATaGATGGCACCACGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKITESLEFSEKQGEMLANERPP*MAPRTA Trigger: GGCTGTGCGTGGTGCCATCCATGGAGGGCGTTCGTT...GGCAAGCATTTCACCTTGTTTTTCAGAGAACTCTAAACTTTCTGTTATCTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTTGTGTTACTACAGTCAAGGCAAAATGAGTGTTGCAATGTTGATACCTTACCATTCGGCTCGACTTaGCAGCCAGGTACCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QFVLLQSRQNECCNVDTLPFGST*QPGTAG Trigger: TCCTGCGGTACCTGGCTGCCAAGTCGAGCCGAATGG...TAAGGTATCAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACACAAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
||
| CDS-3UTR TCA 90 bp | AGCCAGCCCCAATTAAATGTCCTTTATAAGAGCTGCCATGGTTGTGGTGTCTCTCTCTGCAGACGGATATaGTCCCAAGGGATATTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQPQLNVLYKSCHGCGVSLCRRI*SQGIFN Trigger: ATTGAATATCCCTTGGGATCATATCCGTCTGCAGAG...AGAGACACCACAACCATGGCAGCTCTTATAAAGGACATTTAATTGGGGCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
||
| CDS-3UTR TCA 90 bp | CCACTTGGGAGCCAGTCTTCTCCTACCTTCTTTTGGAACAAGAGATACAACTCTCTCCAATGGCTTTTATaGAGCTTTCTTTCAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLGSQSSPTFFWNKRYNSLQWLL*SFLSVP Trigger: GGGCACTGAAAGAAAGCTTCATAAAAGCCATTGGAG...AGAGTTGTATCTCTTGTTCCAAAAGAAGGTAGGAGAAGACTGGCTCCCAAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS-3UTR CCA 90 bp | CAGTTTGTGTTACTACAGTCAAGGCAAAATGAGTGTTGCAATGTTGATACCTTAAACGCCCTCCATGGATaGCACCACGCACAGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: QFVLLQSRQNECCNVDTLNALHG*HHAQPL Trigger: AAGAGGCTGTGCGTGGTGCCATCCATGGAGGGCGTT...TAAGGTATCAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACACAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| 3UTR CAA 72 bp | ACTATTAGGTGTGGCTTTGTTAGAGTAGGTATGGTCTaGTTGGAGGAAGTATGTCATTGTGGGGATGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: TIRCGFVRVGMV*LEEVCHCGDGL Trigger: AAGCCCATCCCCACAATGACATACTTCCTCCAACAAGACCATACCTACTCTAACAAAGCCACACCTAATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| CDS-3UTR GCA 90 bp | ATAATTACAGTTCTGGAAGGAAGAAGTGAGCATACTCAATGGAGCCAATGGAGCGAAGCTTTCTTTCAGTaGCCAGTGCCGGTAAAACAT | + |
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Preference number: 4 (lower is better) Translates to: IITVLEGRSEHTQWSQWSEAFFQ*PVPVKH Trigger: ATGTTTTACCGGCACTGGGCACTGAAAGAAAGCTTC...GCTCCATTGGCTCCATTGAGTATGCTCACTTCTTCCTTCCAGAACTGTAATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS-3UTR GCA 90 bp | CCTAACCACTTGGGAGCCAGTCTTCTCCTACCTTCTTTTGGAACAAGAGATACATCAAATTCAAGCCGCTaGATTTCAAATCCCAATCCA | + |
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Preference number: 4 (lower is better) Translates to: PNHLGASLLLPSFGTRDTSNSSR*ISNPNP Trigger: TGGATTGGGATTTGAAATGCAGCGGCTTGAATTTGA...TGTATCTCTTGTTCCAAAAGAAGGTAGGAGAAGACTGGCTCCCAAGTGGTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS-3UTR TCA 90 bp | TCCTTTATAAGAGCTGCCATGGTTGTGGTGTCTCTTCGCAGTAATGAAACCCTAAAAGAATTCTGGAATTaGACCACGACCTGGAAAACT | + |
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Preference number: 4 (lower is better) Translates to: SFIRAAMVVVSLRSNETLKEFWN*TTTWKT Trigger: AGTTTTCCAGGTCGTGGTTCAATTCCAGAATTCTTT...TAGGGTTTCATTACTGCGAAGAGACACCACAACCATGGCAGCTCTTATAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS-3UTR GCA 90 bp | ATAATTACAGTTCTGGAAGGAAGAAGTGAGCATACTCAATGGAGCCAATGGAGCCTTCCTAACAGCCACTaGAACAAAATGGTGTTCATC | + |
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Preference number: 4 (lower is better) Translates to: IITVLEGRSEHTQWSQWSLPNSH*NKMVFI Trigger: GATGAACACCATTTTGTTGCAGTGGCTGTTAGGAAG...GCTCCATTGGCTCCATTGAGTATGCTCACTTCTTCCTTCCAGAACTGTAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS-3UTR CCA 90 bp | TTCCTCAACCACAGTAGTGTGATGTCAATGAAACTCTCCCAAACCATACCAGGTGTTGAAATTGGGATATaGATTCAACGAGTCTTTCGC | + |
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Preference number: 4 (lower is better) Translates to: FLNHSSVMSMKLSQTIPGVEIGI*IQRVFR Trigger: GCGAAAGACTCGTTGAATCCATATCCCAATTTCAAC...ACCTGGTATGGTTTGGGAGAGTTTCATTGACATCACACTACTGTGGTTGAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS-3UTR GCA 90 bp | GTGTTACTACAGTCAAGGCAAAATGAGTGTTGCAATGTTGATACCTTAAACAGATTCTGCAGCAAGAACTaGATAGTCCCCTTGGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: VLLQSRQNECCNVDTLNRFCSKN*IVPLVR Trigger: TCTCACCAAGGGGACTATGCAGTTCTTGCTGCAGAA...TCTGTTTAAGGTATCAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS-3UTR CCA 90 bp | ATAATTACAGTTCTGGAAGGAAGAAGTGAGCATACTCAATGGAGCCAATGGAGCGCCACTGCAACAAAATaGTGTTCATCTATTTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: IITVLEGRSEHTQWSQWSATATK*CSSILL Trigger: AAGCAAAATAGATGAACACCATTTTGTTGCAGTGGC...GCTCCATTGGCTCCATTGAGTATGCTCACTTCTTCCTTCCAGAACTGTAATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS-3UTR TCA 90 bp | GTGTTACTACAGTCAAGGCAAAATGAGTGTTGCAATGTTGATACCTTAAACAGAAAAACAGTCCCAAAATaGAGGATCCTCAGGTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: VLLQSRQNECCNVDTLNRKTVPK*RILRCH Trigger: ATGACACCTGAGGATCCTTCATTTTGGGACTGTTTT...TCTGTTTAAGGTATCAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS-3UTR CCA 90 bp | TATGAAGATATAAACCTGGAAGTCTCAACAGCAGTTTGTGTTACTACAGTCAAGATGGTAAACTTCCTCTaGGATAGCTTAGAATCATCT | + |
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Preference number: 4 (lower is better) Translates to: YEDINLEVSTAVCVTTVKMVNFL*DSLESS Trigger: AGATGATTCTAAGCTATCCCAGAGGAAGTTTACCAT...CTTGACTGTAGTAACACAAACTGCTGTTGAGACTTCCAGGTTTATATCTTCATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| 3UTR CAA 72 bp | AATAAGGTAATACCTAAAGCTATTTGTTTAAACCCTTaGAACCAATCACTCCTGTCTGCAGGACATAACAAT | + |
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Preference number: 4 (lower is better) Translates to: NKVIPKAICLNP*NQSLLSAGHNN Trigger: ATTGTTATGTCCTGCAGACAGGAGTGATTGGTTCAAAGGGTTTAAACAAATAGCTTTAGGTATTACCTTATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| CDS CCA 90 bp | CTCCGGCTGGATAGACCGCATCGCCAGAAGCCATTCGGCTCGACTTaGCAGCCAGGTACCGCAGGAGAATGCCCAACGAACGCCCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LRLDRPHRQKPFGST*QPGTAGECPTNALH Trigger: ATGGAGGGCGTTCGTTGGGCATTCTCCTGCGGTACCTGGCTGCCAAGTCGAGCCGAATGGCTTCTGGCGATGCGGTCTATCCAGCCGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| CDS CCA 90 bp | TCGCGGGCAAACACGAACTTGCCGATGCGCTCCTTCTCCTCCGGCTaGATAGACCGCATCGCCAGAAGCCATTCGGCTCGACTTGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SRANTNLPMRSFSSG*IDRIARSHSARLGS Trigger: GCTGCCAAGTCGAGCCGAATGGCTTCTGGCGATGCGGTCTATCCAGCCGGAGGAGAAGGAGCGCATCGGCAAGTTCGTGTTTGCCCGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS-3UTR CAA 90 bp | GTAAGCCAGCCCCAATTAAATGTCCTTTATAAGAGCTGCCATGGTTGTGGTGTCGCCATTCGGCTCGACTaGGCAGCCAGGTACCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: VSQPQLNVLYKSCHGCGVAIRLD*AARYRR Trigger: CCTGCGGTACCTGGCTGCCAAGTCGAGCCGAATGGC...GACACCACAACCATGGCAGCTCTTATAAAGGACATTTAATTGGGGCTGGCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| CDS-3UTR CAA 90 bp | CCACTTGGGAGCCAGTCTTCTCCTACCTTCTTTTGGAACAAGAGATACAACTCTGCCATTCGGCTCGACTaGGCAGCCAGGTACCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PLGSQSSPTFFWNKRYNSAIRLD*AARYRR Trigger: CCTGCGGTACCTGGCTGCCAAGTCGAGCCGAATGGC...AGAGTTGTATCTCTTGTTCCAAAAGAAGGTAGGAGAAGACTGGCTCCCAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| CDS-3UTR CAA 90 bp | TTTGTTAGAGTAGGTATGGTCTTGTTGGAGGAAGTATGTCATTGTGGGGATGGGCGGGCAAACACGAACTaGCCGATGCGCTCCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: FVRVGMVLLEEVCHCGDGRANTN*PMRSFS Trigger: GGAGAAGGAGCGCATCGGCAAGTTCGTGTTTGCCCG...CCCATCCCCACAATGACATACTTCCTCCAACAAGACCATACCTACTCTAACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS-3UTR CAA 90 bp | CAGTTTGTGTTACTACAGTCAAGGCAAAATGAGTGTTGCAATGTTGATACCTTAGCCATTCGGCTCGACTaGGCAGCCAGGTACCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: QFVLLQSRQNECCNVDTLAIRLD*AARYRR Trigger: CCTGCGGTACCTGGCTGCCAAGTCGAGCCGAATGGC...TAAGGTATCAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACACAAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| CDS-3UTR CAA 90 bp | CAGTTTGTGTTACTACAGTCAAGGCAAAATGAGTGTTGCAATGTTGATACCTTAGAACCGGCTTTCCCTTaGAAGTTCTCTGCAGACGGA | + |
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Preference number: 5 (lower is better) Translates to: QFVLLQSRQNECCNVDTLEPAFP*KFSADG Trigger: TCCGTCTGCAGAGAACTTCAAAGGGAAAGCCGGTTC...TAAGGTATCAACATTGCAACACTCATTTTGCCTTGACTGTAGTAACACAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS-3UTR CAA 90 bp | TCCTTTATAAGAGCTGCCATGGTTGTGGTGTCTCTTCGCAGTAATGAAACCCTAGAAAGAATTCTGGAATaGAACCACGACCTGGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: SFIRAAMVVVSLRSNETLERILE*NHDLEN Trigger: GTTTTCCAGGTCGTGGTTCAATTCCAGAATTCTTTC...TAGGGTTTCATTACTGCGAAGAGACACCACAACCATGGCAGCTCTTATAAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS-3UTR CAA 90 bp | TCCTTTATAAGAGCTGCCATGGTTGTGGTGTCTCTTCGCAGTAATGAAACCCTATGGTGTTCATCTATTTaGCTTTCCTCAAAGGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: SFIRAAMVVVSLRSNETLWCSSI*LSSKAH Trigger: ATGGGCCTTTGAGGAAAGCAAAATAGATGAACACCA...TAGGGTTTCATTACTGCGAAGAGACACCACAACCATGGCAGCTCTTATAAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS-3UTR CAA 90 bp | GGCACTATTAGGTGTGGCTTTGTTAGAGTAGGTATGGTCTTGTTGGAGGAAGTAGTTTCCCACTCCTTTTaGGTAAACTTTCTTTTCATG | + |
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Preference number: 5 (lower is better) Translates to: GTIRCGFVRVGMVLLEEVVSHSF*VNFLFM Trigger: CATGAAAAGAAAGTTTACCAAAAAGGAGTGGGAAAC...TACTTCCTCCAACAAGACCATACCTACTCTAACAAAGCCACACCTAATAGTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS-3UTR CAA 90 bp | GGAAAGATAACAGAAAGTTTAGAGTTCTCTGAAAAACAAGGTGAAATGCTTGCCAACTGCATAGTCCCCTaGGTGAGAGATGTTAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: GKITESLEFSEKQGEMLANCIVP*VRDVKV Trigger: AACTTTAACATCTCTCACCAAGGGGACTATGCAGTT...GGCAAGCATTTCACCTTGTTTTTCAGAGAACTCTAAACTTTCTGTTATCTTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS CAA 72 bp | GCCAAGGCTGCCTTGGCGTCGCGGGCAAACACGAACTaGCCGATGCGCTCCTTCTCCTCCGGCTGGATAGAC | + |
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Preference number: 6 (lower is better) Translates to: AKAALASRANTN*PMRSFSSGWID Trigger: GTCTATCCAGCCGGAGGAGAAGGAGCGCATCGGCAAGTTCGTGTTTGCCCGCGACGCCAAGGCAGCCTTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS CAA 90 bp | AAACGACCAGCCAAGGCTGCCTTGGCGTCGCGGGCAAACACGAACTaGCCGATGCGCTCCTTCTCCTCCGGCTGGATAGACCGCATCGCC | + |
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Preference number: 6 (lower is better) Translates to: KRPAKAALASRANTN*PMRSFSSGWIDRIA Trigger: GGCGATGCGGTCTATCCAGCCGGAGGAGAAGGAGCGCATCGGCAAGTTCGTGTTTGCCCGCGACGCCAAGGCAGCCTTGGCTGGTCGTTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS CCA 72 bp | ACGACCAGCTTGCCGATGCGCTCCTTCTCCTCCGGCTaGATAGACCGCATCGCCAGAAGCCATTCGGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: TTSLPMRSFSSG*IDRIARSHSAR Trigger: TCGAGCCGAATGGCTTCTGGCGATGCGGTCTATCCAGCCGGAGGAGAAGGAGCGCATCGGCAAGCTGGTCGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| CDS CCA 72 bp | ACCGCAGGAGAATGCCCAACGAACGCCCTCCATGGATaGCACCACGCACAGCCTCTTAGCGGGGAACACCAT | + |
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Preference number: 6 (lower is better) Translates to: TAGECPTNALHG*HHAQPLSGEHH Trigger: ATGGTGTTCCCCGCTAAGAGGCTGTGCGTGGTGCCATCCATGGAGGGCGTTCGTTGGGCATTCTCCTGCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| CDS CCA 72 bp | GATAGACCGCATCGCCAGAAGCCATTCGGCTCGACTTaGCAGCCAGGTACCGCAGGAGAATGCCCAACGAAC | + |
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Preference number: 6 (lower is better) Translates to: DRPHRQKPFGST*QPGTAGECPTN Trigger: GTTCGTTGGGCATTCTCCTGCGGTACCTGGCTGCCAAGTCGAGCCGAATGGCTTCTGGCGATGCGGTCTATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051589.9 ENSMUST00000212066.2 ENSMUST00000212897.2 |
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| CDS CCA 72 bp | AACACGAACTTGCCGATGCGCTCCTTCTCCTCCGGCTaGATAGACCGCATCGCCAGAAGCCATTCGGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: NTNLPMRSFSSG*IDRIARSHSAR Trigger: TCGAGCCGAATGGCTTCTGGCGATGCGGTCTATCCAGCCGGAGGAGAAGGAGCGCATCGGCAAGTTCGTGTT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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| CDS CAA 72 bp | AATTTCCTTATCATCAAACGACCAGCCAAGGCTGCCTaGGCGTCGCGGGCAAACACGAACTTGCCGATGCGC | + |
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Preference number: 6 (lower is better) Translates to: NFLIIKRPAKAA*ASRANTNLPMR Trigger: GCGCATCGGCAAGTTCGTGTTTGCCCGCGACGCCAAGGCAGCCTTGGCTGGTCGTTTGATGATAAGGAAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051589.9 |
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