Pregenerated sensors for AANAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020804Ensembl transcript IDs: ENSMUST00000021160.10, ENSMUST00000123507.2, ENSMUST00000153476.8
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCACAGGAGGACAGAGCCCTTGCCCTGCTGCCGGAAGGTTCTGTaGACCGCCAGTACGTGCAGGTGGGCTGTGCGGCCTCCGGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: LHRRTEPLPCCRKVL*TASTCRWAVRPPGL Trigger: CAGGCCCGGAGGCCGCACAGCCCACCTGCACGTACTGGCGGTGCACAGAACCTTCCGGCAGCAGGGCAAGGGCTCTGTCCTCCTGTGGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR CCA 90 bp | GGGAAGTGGACCGGAGGCCCCGAGCTGCTGCTCCCACCCTCGCCATaGCCAAGCACACAGCTTGGGTCAGCAGCCGCTGTTCCTGCGCAG | + |
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Preference number: 1 (lower is better) Translates to: GKWTGGPELLLPPSP*PSTQLGSAAAVPAQ Trigger: CTGCGCAGGAACAGCGGCTGCTGACCCAAGCTGTGTGCTTGGCCATGGCGAGGGTGGGAGCAGCAGCTCGGGGCCTCCGGTCCACTTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR GCA 90 bp | GAGCCCTTGCCCTGCTGCCGGAAGGTTCTGTGCACCGCCAGTACGTaGAGGTGGGCTGTGCGGCCTCCGGGCCTGTGTAGTGTCAGCGAC | + |
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Preference number: 1 (lower is better) Translates to: EPLPCCRKVLCTAST*RWAVRPPGLCSVSD Trigger: GTCGCTGACACTACACAGGCCCGGAGGCCGCACAGCCCACCTGCACGTACTGGCGGTGCACAGAACCTTCCGGCAGCAGGGCAAGGGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR CCA 90 bp | CCCCGAGCTGCTGCTCCCACCCTCGCCATGGCCAAGCACACAGCTTaGGTCAGCAGCCGCTGTTCCTGCGCAGGAAGGCGTGGCATCGTA | + |
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Preference number: 1 (lower is better) Translates to: PRAAAPTLAMAKHTA*VSSRCSCAGRRGIV Trigger: TACGATGCCACGCCTTCCTGCGCAGGAACAGCGGCTGCTGACCCAAGCTGTGTGCTTGGCCATGGCGAGGGTGGGAGCAGCAGCTCGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR TCA 90 bp | ATGCTAGCCAGCTCTAGTTGGATGGGCTGGAGGCAGAGGAGGCTGTaGCATGGGAAGTGGACCGGAGGCCCCGAGCTGCTGCTCCCACCC | + |
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Preference number: 1 (lower is better) Translates to: MLASSSWMGWRQRRL*HGKWTGGPELLLPP Trigger: GGGTGGGAGCAGCAGCTCGGGGCCTCCGGTCCACTTCCCATGTCACAGCCTCCTCTGCCTCCAGCCCATCCAACTAGAGCTGGCTAGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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| 3UTR CCA 90 bp | TTGCCCTGCTGCCGGAAGGTTCTGTGCACCGCCAGTACGTGCAGGTaGGCTGTGCGGCCTCCGGGCCTGTGTAGTGTCAGCGACTCATCT | + |
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Preference number: 1 (lower is better) Translates to: LPCCRKVLCTASTCR*AVRPPGLCSVSDSS Trigger: AGATGAGTCGCTGACACTACACAGGCCCGGAGGCCGCACAGCCCACCTGCACGTACTGGCGGTGCACAGAACCTTCCGGCAGCAGGGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021160.10 |
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| 3UTR GCA 90 bp | GCTGCCGGAAGGTTCTGTGCACCGCCAGTACGTGCAGGTGGGCTGTaGGGCCTCCGGGCCTGTGTAGTGTCAGCGACTCATCTAAAGTCC | + |
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Preference number: 1 (lower is better) Translates to: AAGRFCAPPVRAGGL*GLRACVVSATHLKS Trigger: GGACTTTAGATGAGTCGCTGACACTACACAGGCCCGGAGGCCGCACAGCCCACCTGCACGTACTGGCGGTGCACAGAACCTTCCGGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021160.10 |
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| 3UTR TCA 90 bp | TCCCCAGCGTTCGGAGCTAGGAAGGGATGTCAGCCTGGCCAGGAGTaGGGGCTCCCAAGGACCAGGGCACTGCACTGGAGCACAGTAAAC | + |
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Preference number: 1 (lower is better) Translates to: SPAFGARKGCQPGQE*GLPRTRALHWSTVN Trigger: GTTTACTGTGCTCCAGTGCAGTGCCCTGGTCCTTGGGAGCCCTCACTCCTGGCCAGGCTGACATCCCTTCCTAGCTCCGAACGCTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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| 3UTR GCA 90 bp | GACTGCCCAGGTGGTGAAGGTATCTCCACAGGAGGACAGAGCCCTTaGCCTGCTGCCGGAAGGTTCTGTGCACCGCCAGTACGTGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: DCPGGEGISTGGQSP*PAAGRFCAPPVRAG Trigger: ACCTGCACGTACTGGCGGTGCACAGAACCTTCCGGCAGCAGGGCAAGGGCTCTGTCCTCCTGTGGAGATACCTTCACCACCTGGGCAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR TCA 90 bp | AGGTGGGCTGTGCGGCCTCCGGGCCTGTGTAGTGTCAGCGACTCCTaGGTAAGTCTCTCCTTGTCCCACAGCGAGCCAATGATGAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: RWAVRPPGLCSVSDS*VSLSLSHSEPMMKA Trigger: GGCCTTCATCATTGGCTCGCTGTGGGACAAGGAGAGACTTACTCAGGAGTCGCTGACACTACACAGGCCCGGAGGCCGCACAGCCCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123507.2 |
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| 3UTR CCA 90 bp | GCACACAGCTTGGGTCAGCAGCCGCTGTTCCTGCGCAGGAAGGCGTaGCATCGTAAGGAACACTGTAGCTCCGTGAAGGTGAGAGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: AHSLGQQPLFLRRKA*HRKEHCSSVKVREP Trigger: GGGCTCTCTCACCTTCACGGAGCTACAGTGTTCCTTACGATGCCACGCCTTCCTGCGCAGGAACAGCGGCTGCTGACCCAAGCTGTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR TCA 90 bp | GGAAGCCAAATTTCTCATAGAAGGGTACCAGGGCATCCTCACACATaGGCACAGCCCGGCGCACGGCCGGCTGACTGCCCAGGTGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: GSQISHRRVPGHPHT*AQPGARPADCPGGE Trigger: TTCACCACCTGGGCAGTCAGCCGGCCGTGCGCCGGGCTGTGCTCATGTGTGAGGATGCCCTGGTACCCTTCTATGAGAAATTTGGCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR CCA 90 bp | TCCTGGTCTTGCCTTTGTGCACAGTTCAGAAGGCAAGAGGTCCTCTaGGGACAGACAGCAGCCTCTGCTGAAGGGAAGCCACCTCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: SWSCLCAQFRRQEVL*GQTAASAEGKPPPV Trigger: GACAGGAGGTGGCTTCCCTTCAGCAGAGGCTGCTGTCTGTCCCCAGAGGACCTCTTGCCTTCTGAACTGTGCACAAAGGCAAGACCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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| 3UTR TCA 90 bp | GTTCAGAAGGCAAGAGGTCCTCTGGGGACAGACAGCAGCCTCTGCTaGAGGGAAGCCACCTCCTGTCCTCTTTATTGGCCCTTACCTCTG | + |
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Preference number: 1 (lower is better) Translates to: VQKARGPLGTDSSLC*REATSCPLYWPLPL Trigger: CAGAGGTAAGGGCCAATAAAGAGGACAGGAGGTGGCTTCCCTTCAGCAGAGGCTGCTGTCTGTCCCCAGAGGACCTCTTGCCTTCTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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| 3UTR GCA 90 bp | AGAGCAGGCAGAGGAGGAAATGCGGAGACAAACCCCCTCTGTTCCTaGTTCCCCATCCTGGTCTTGCCTTTGTGCACAGTTCAGAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: RAGRGGNAETNPLCS*FPILVLPLCTVQKA Trigger: TGCCTTCTGAACTGTGCACAAAGGCAAGACCAGGATGGGGAAGCAGGAACAGAGGGGGTTTGTCTCCGCATTTCCTCCTCTGCCTGCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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| 3UTR CCA 90 bp | GAGGAAATGCGGAGACAAACCCCCTCTGTTCCTGCTTCCCCATCCTaGTCTTGCCTTTGTGCACAGTTCAGAAGGCAAGAGGTCCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: EEMRRQTPSVPASPS*SCLCAQFRRQEVLW Trigger: CCAGAGGACCTCTTGCCTTCTGAACTGTGCACAAAGGCAAGACCAGGATGGGGAAGCAGGAACAGAGGGGGTTTGTCTCCGCATTTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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| 3UTR CCA 90 bp | GCCACCTCCTGTCCTCTTTATTGGCCCTTACCTCTGTACTCCAGTTaGGAACCGCTGTCTCCCTTCATGCTAGCCAGCTCTAGTTGGATG | + |
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Preference number: 1 (lower is better) Translates to: ATSCPLYWPLPLYSS*EPLSPFMLASSSWM Trigger: CATCCAACTAGAGCTGGCTAGCATGAAGGGAGACAGCGGTTCCCAACTGGAGTACAGAGGTAAGGGCCAATAAAGAGGACAGGAGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGGCAGAGGAGGCTGTGACATGGGAAGTGGACCGGAGGCCCCGAGCTGCTGGGCATCCTCACACATaGGCACAGCCCGGCGCACGG | + |
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Preference number: 2 (lower is better) Translates to: LEAEEAVTWEVDRRPRAAGHPHT*AQPGAR Trigger: CCGTGCGCCGGGCTGTGCTCATGTGTGAGGATGCCC...AGCAGCTCGGGGCCTCCGGTCCACTTCCCATGTCACAGCCTCCTCTGCCTCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGGCAGAGGAGGCTGTGACATGGGAAGTGGACCGGAGGCCCCGAGCTGCTCGTGCAGGTGGGCTGTaGGGCCTCCGGGCCTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: LEAEEAVTWEVDRRPRAARAGGL*GLRACV Trigger: TACACAGGCCCGGAGGCCGCACAGCCCACCTGCACG...AGCAGCTCGGGGCCTCCGGTCCACTTCCCATGTCACAGCCTCCTCTGCCTCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGAGGTCCTCTGGGGACAGACAGCAGCCTCTGCTGAAGGGAAGCCACCTCCGTGCAGGTGGGCTGTaGGGCCTCCGGGCCTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: GKRSSGDRQQPLLKGSHLRAGGL*GLRACV Trigger: TACACAGGCCCGGAGGCCGCACAGCCCACCTGCACG...GAGGTGGCTTCCCTTCAGCAGAGGCTGCTGTCTGTCCCCAGAGGACCTCTTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGAGGCAGAGGAGGCTGTGACATGGGAAGTGGACCGGAGGCCCCGAGCTGCCGGCACATTGGTGGCTaGCTGCAGTTTGGTGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: AGGRGGCDMGSGPEAPSCRHIGG*LQFGVA Trigger: AGCCACACCAAACTGCAGTCAGCCACCAATGTGCCG...GCAGCTCGGGGCCTCCGGTCCACTTCCCATGTCACAGCCTCCTCTGCCTCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153476.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGATGTCAGCCTGGCCAGGAGTGAGGGCTCCCAAGGACCAGGGCACTGCACTACAGAGCCCTTGCCCTaGTGCCGGAAGGTTCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: RDVSLARSEGSQGPGHCTTEPLP*CRKVLC Trigger: GCACAGAACCTTCCGGCAGCAGGGCAAGGGCTCTGT...AGTGCAGTGCCCTGGTCCTTGGGAGCCCTCACTCCTGGCCAGGCTGACATCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR-3UTR GCA 90 bp | GGACAGACAGCAGCCTCTGCTGAAGGGAAGCCACCTCCTGTCCTCTTTATTGGCGAGGCCCCGAGCTGCTaGTCCCACCCTCGCCATGGC | + |
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Preference number: 2 (lower is better) Translates to: GQTAASAEGKPPPVLFIGEAPSC*SHPRHG Trigger: GCCATGGCGAGGGTGGGAGCAGCAGCTCGGGGCCTC...GCCAATAAAGAGGACAGGAGGTGGCTTCCCTTCAGCAGAGGCTGCTGTCTGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCTGGCTGCCCCTCATCCCCAGCGTTCGGAGCTAGGAAGGGATGTCAGCCTGGTGGGCCGGCACATTaGTGGCTGACTGCAGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: APGCPSSPAFGARKGCQPGGPAH*WLTAVW Trigger: CCAAACTGCAGTCAGCCACCAATGTGCCGGCCCACC...AGGCTGACATCCCTTCCTAGCTCCGAACGCTGGGGATGAGGGGCAGCCAGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153476.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGGTCCTCTGGGGACAGACAGCAGCCTCTGCTGAAGGGAAGCCACCTCCTTGCCAGTCCTGTGGCTaGTGGGGGAACCAGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: QEVLWGQTAASAEGKPPPCQSCG*WGNQGG Trigger: GCCTCCCTGGTTCCCCCACCAGCCACAGGACTGGCA...AGGAGGTGGCTTCCCTTCAGCAGAGGCTGCTGTCTGTCCCCAGAGGACCTCTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153476.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGGGACAGACAGCAGCCTCTGCTGAAGGGAAGCCACCTCCTGTCCTCTTTGAGGTGCCAGTCCTGTaGCTGGTGGGGGAACCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LWGQTAASAEGKPPPVLFEVPVL*LVGEPG Trigger: CCCTGGTTCCCCCACCAGCCACAGGACTGGCACCTC...AAAGAGGACAGGAGGTGGCTTCCCTTCAGCAGAGGCTGCTGTCTGTCCCCAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153476.8 |
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| 3UTR-3UTR GCA 90 bp | GTCAGCAGCCGCTGTTCCTGCGCAGGAAGGCGTGGCATCGTAAGGAACACTGTAGGAGGACAGAGCCCTTaGCCTGCTGCCGGAAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: VSSRCSCAGRRGIVRNTVGGQSP*PAAGRF Trigger: GAACCTTCCGGCAGCAGGGCAAGGGCTCTGTCCTCC...TACAGTGTTCCTTACGATGCCACGCCTTCCTGCGCAGGAACAGCGGCTGCTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGAGGAGGAAATGCGGAGACAAACCCCCTCTGTTCCTGCTTCCCCATCCTGAGCAGCCGCTGTTCCTaGGCAGGAAGGCGTGGCATC | + |
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Preference number: 2 (lower is better) Translates to: GRGGNAETNPLCSCFPILSSRCS*AGRRGI Trigger: GATGCCACGCCTTCCTGCGCAGGAACAGCGGCTGCT...CAGGATGGGGAAGCAGGAACAGAGGGGGTTTGTCTCCGCATTTCCTCCTCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGATGTCAGCCTGGCCAGGAGTGAGGGCTCCCAAGGACCAGGGCACTGCACTAACCCCCTCTGTTCCTaGTTCCCCATCCTGGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: RDVSLARSEGSQGPGHCTNPLCS*FPILVL Trigger: CAAGACCAGGATGGGGAAGCAGGAACAGAGGGGGTT...AGTGCAGTGCCCTGGTCCTTGGGAGCCCTCACTCCTGGCCAGGCTGACATCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCTAGTTGGATGGGCTGGAGGCAGAGGAGGCTGTGACATGGGAAGTGGACCGGCCAAGCACACAGCTTaGGTCAGCAGCCGCTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: ALVGWAGGRGGCDMGSGPAKHTA*VSSRCS Trigger: GGAACAGCGGCTGCTGACCCAAGCTGTGTGCTTGGC...CGGTCCACTTCCCATGTCACAGCCTCCTCTGCCTCCAGCCCATCCAACTAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGGAAATGCGGAGACAAACCCCCTCTGTTCCTGCTTCCCCATCCTGGTCTTGGCACGGCCGGCTGACTaGCCAGGTGGTGAAGGTATC | + |
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Preference number: 2 (lower is better) Translates to: GGNAETNPLCSCFPILVLARPAD*PGGEGI Trigger: GATACCTTCACCACCTGGGCAGTCAGCCGGCCGTGC...CAAGACCAGGATGGGGAAGCAGGAACAGAGGGGGTTTGTCTCCGCATTTCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGATGTCAGCCTGGCCAGGAGTGAGGGCTCCCAAGGACCAGGGCACTGCACTAGGCAAGATGAAGGCTaGTTGCTCTGCACTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RDVSLARSEGSQGPGHCTRQDEG*LLCTCL Trigger: CAGGCAAGTGCAGAGCAAGCAGCCTTCATCTTGCCT...AGTGCAGTGCCCTGGTCCTTGGGAGCCCTCACTCCTGGCCAGGCTGACATCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123507.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAAGGACCAGGGCACTGCACTGGAGCACAGTAAACAGAGCAGGCAGAGGACCAGCTCTAGTTGGATaGGCTGGAGGCAGAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: LPRTRALHWSTVNRAGRGPALVG*AGGRGG Trigger: GCCTCCTCTGCCTCCAGCCCATCCAACTAGAGCTGG...TCCTCTGCCTGCTCTGTTTACTGTGCTCCAGTGCAGTGCCCTGGTCCTTGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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| 3UTR-3UTR GCA 90 bp | GGACAGACAGCAGCCTCTGCTGAAGGGAAGCCACCTCCTGTCCTCTTTATTGGCACAGAGCCCTTGCCCTaGTGCCGGAAGGTTCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: GQTAASAEGKPPPVLFIGTEPLP*CRKVLC Trigger: GCACAGAACCTTCCGGCAGCAGGGCAAGGGCTCTGT...GCCAATAAAGAGGACAGGAGGTGGCTTCCCTTCAGCAGAGGCTGCTGTCTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGGTCCTCTGGGGACAGACAGCAGCCTCTGCTGAAGGGAAGCCACCTCCTCCTGCTTCCCCATCCTaGTCTTGCCTTTGTGCACAG | + |
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Preference number: 2 (lower is better) Translates to: QEVLWGQTAASAEGKPPPPASPS*SCLCAQ Trigger: CTGTGCACAAAGGCAAGACCAGGATGGGGAAGCAGG...AGGAGGTGGCTTCCCTTCAGCAGAGGCTGCTGTCTGTCCCCAGAGGACCTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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| 3UTR-3UTR TCA 90 bp | AGGACCAGGGCACTGCACTGGAGCACAGTAAACAGAGCAGGCAGAGGAGGAAATGACAGCAGCCTCTGCTaGAGGGAAGCCACCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: RTRALHWSTVNRAGRGGNDSSLC*REATSC Trigger: ACAGGAGGTGGCTTCCCTTCAGCAGAGGCTGCTGTC...ATTTCCTCCTCTGCCTGCTCTGTTTACTGTGCTCCAGTGCAGTGCCCTGGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGCCACCTCCTGTCCTCTTTATTGGCCCTTACCTCTGTACTCCAGTTGGGGCCAAGCACACAGCTTaGGTCAGCAGCCGCTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: GKPPPVLFIGPYLCTPVGAKHTA*VSSRCS Trigger: GGAACAGCGGCTGCTGACCCAAGCTGTGTGCTTGGC...CCCAACTGGAGTACAGAGGTAAGGGCCAATAAAGAGGACAGGAGGTGGCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACCAGGGCACTGCACTGGAGCACAGTAAACAGAGCAGGCAGAGGAGGAAATCTCAAACCAGCCCAGTaGCAGCTCTGGACACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: RTRALHWSTVNRAGRGGNLKPAQ*QLWTQG Trigger: ACCCTGTGTCCAGAGCTGTCACTGGGCTGGTTTGAG...ATTTCCTCCTCTGCCTGCTCTGTTTACTGTGCTCCAGTGCAGTGCCCTGGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123507.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAGTGAGGGCTCCCAAGGACCAGGGCACTGCACTGGAGCACAGTAAACAGTCCCCATCCTGGTCTTaGCTTTGTGCACAGTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: PGVRAPKDQGTALEHSKQSPSWS*LCAQFR Trigger: TCTGAACTGTGCACAAAGGCAAGACCAGGATGGGGA...CTGTTTACTGTGCTCCAGTGCAGTGCCCTGGTCCTTGGGAGCCCTCACTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGAAATGCGGAGACAAACCCCCTCTGTTCCTGCTTCCCCATCCTGGTCTTGCAACCCCCTCTGTTCCTaGTTCCCCATCCTGGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: EEMRRQTPSVPASPSWSCNPLCS*FPILVL Trigger: CAAGACCAGGATGGGGAAGCAGGAACAGAGGGGGTT...GCAAGACCAGGATGGGGAAGCAGGAACAGAGGGGGTTTGTCTCCGCATTTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGGGACAGACAGCAGCCTCTGCTGAAGGGAAGCCACCTCCTGTCCTCTTTTGCTTGCTCTGCACTTaGCTGCTGTTTGTGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: LWGQTAASAEGKPPPVLFCLLCT*LLFVHR Trigger: TCTGTGCACAAACAGCAGGCAAGTGCAGAGCAAGCA...AAAGAGGACAGGAGGTGGCTTCCCTTCAGCAGAGGCTGCTGTCTGTCCCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123507.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCAGTGACAGCTCTGGACACAGGGTTAGGAAGTGCCGGATCTCATCCAAGTTGCTCTGCACTTGCCTaGTGTTTGTGCACAGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: SPVTALDTGLGSAGSHPSCSALA*CLCTEV Trigger: CACTTCTGTGCACAAACAGCAGGCAAGTGCAGAGCA...ACTTGGATGAGATCCGGCACTTCCTAACCCTGTGTCCAGAGCTGTCACTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123507.2 |
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| 3UTR GCA 72 bp | CCCTGCTGCCGGAAGGTTCTGTGCACCGCCAGTACGTaGAGGTGGGCTGTGCGGCCTCCGGGCCTGTGTAGT | + |
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Preference number: 3 (lower is better) Translates to: PCCRKVLCTAST*RWAVRPPGLCS Trigger: ACTACACAGGCCCGGAGGCCGCACAGCCCACCTGCACGTACTGGCGGTGCACAGAACCTTCCGGCAGCAGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
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| 3UTR GCA 72 bp | GGCTGTGACATGGGAAGTGGACCGGAGGCCCCGAGCTaGTGCTCCCACCCTCGCCATGGCCAAGCACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: GCDMGSGPEAPS*CSHPRHGQAHS Trigger: GCTGTGTGCTTGGCCATGGCGAGGGTGGGAGCAGCAGCTCGGGGCCTCCGGTCCACTTCCCATGTCACAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| 3UTR CCA 72 bp | GCTGCTCCCACCCTCGCCATGGCCAAGCACACAGCTTaGGTCAGCAGCCGCTGTTCCTGCGCAGGAAGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: AAPTLAMAKHTA*VSSRCSCAGRR Trigger: ACGCCTTCCTGCGCAGGAACAGCGGCTGCTGACCCAAGCTGTGTGCTTGGCCATGGCGAGGGTGGGAGCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
||
| 3UTR GCA 72 bp | AGGTTCTGTGCACCGCCAGTACGTGCAGGTGGGCTGTaGGGCCTCCGGGCCTGTGTAGTGTCAGCGACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RFCAPPVRAGGL*GLRACVVSATP Trigger: AGGAGTCGCTGACACTACACAGGCCCGGAGGCCGCACAGCCCACCTGCACGTACTGGCGGTGCACAGAACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123507.2 |
||
| 3UTR GCA 72 bp | AGGTTCTGTGCACCGCCAGTACGTGCAGGTGGGCTGTaGGGCCTCCGGGCCTGTGTAGTGTCAGCGACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: RFCAPPVRAGGL*GLRACVVSATH Trigger: ATGAGTCGCTGACACTACACAGGCCCGGAGGCCGCACAGCCCACCTGCACGTACTGGCGGTGCACAGAACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021160.10 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGCAGAGGAGGCTGTGACATGGGAAGTGGACCGGAGGCCCCGAGCTGCTGCCTGCTTGCTCTGCACTaGCCTGCTGTTTGTGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: GGRGGCDMGSGPEAPSCCLLALH*PAVCAQ Trigger: CTGTGCACAAACAGCAGGCAAGTGCAGAGCAAGCAG...GCAGCAGCTCGGGGCCTCCGGTCCACTTCCCATGTCACAGCCTCCTCTGCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123507.2 |
||
| 3UTR GCA 72 bp | AGGTATCTCCACAGGAGGACAGAGCCCTTGCCCTGCTaGCGGAAGGTTCTGTGCACCGCCAGTACGTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RYLHRRTEPLPC*RKVLCTASTCR Trigger: CCTGCACGTACTGGCGGTGCACAGAACCTTCCGGCAGCAGGGCAAGGGCTCTGTCCTCCTGTGGAGATACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
||
| 3UTR CCA 72 bp | GGGGGTGGGCCGGCACATTGGTGGCTGACTGCAGTTTaGTGTGGCTCTGCAGCATGTCCCTACCCCAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GGGPAHWWLTAV*CGSAACPYPKD Trigger: ATCCTTGGGGTAGGGACATGCTGCAGAGCCACACCAAACTGCAGTCAGCCACCAATGTGCCGGCCCACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153476.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCTGGCTGCCCCTCATCCCCAGCGTTCGGAGCTAGGAAGGGATGTCAGCCTACCTCTGTACTCCAGTaGGGAACCGCTGTCTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: APGCPSSPAFGARKGCQPTSVLQ*GTAVSL Trigger: AAGGGAGACAGCGGTTCCCAACTGGAGTACAGAGGT...AGGCTGACATCCCTTCCTAGCTCCGAACGCTGGGGATGAGGGGCAGCCAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| 3UTR TCA 72 bp | ATTTCTCATAGAAGGGTACCAGGGCATCCTCACACATaGGCACAGCCCGGCGCACGGCCGGCTGACTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ISHRRVPGHPHT*AQPGARPADCP Trigger: TGGGCAGTCAGCCGGCCGTGCGCCGGGCTGTGCTCATGTGTGAGGATGCCCTGGTACCCTTCTATGAGAAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
||
| 3UTR TCA 72 bp | GTGCGGCCTCCGGGCCTGTGTAGTGTCAGCGACTCCTaGGTAAGTCTCTCCTTGTCCCACAGCGAGCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: VRPPGLCSVSDS*VSLSLSHSEPM Trigger: CATTGGCTCGCTGTGGGACAAGGAGAGACTTACTCAGGAGTCGCTGACACTACACAGGCCCGGAGGCCGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123507.2 |
||
| 3UTR GCA 72 bp | GGTGGTGAAGGTATCTCCACAGGAGGACAGAGCCCTTaGCCTGCTGCCGGAAGGTTCTGTGCACCGCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: GGEGISTGGQSP*PAAGRFCAPPV Trigger: TACTGGCGGTGCACAGAACCTTCCGGCAGCAGGGCAAGGGCTCTGTCCTCCTGTGGAGATACCTTCACCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
||
| 3UTR GCA 72 bp | GCCAAGCACACAGCTTGGGTCAGCAGCCGCTGTTCCTaGGCAGGAAGGCGTGGCATCGTAAGGAACACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: AKHTAWVSSRCS*AGRRGIVRNTV Trigger: TACAGTGTTCCTTACGATGCCACGCCTTCCTGCGCAGGAACAGCGGCTGCTGACCCAAGCTGTGTGCTTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
||
| 3UTR CCA 72 bp | TTGGGTCAGCAGCCGCTGTTCCTGCGCAGGAAGGCGTaGCATCGTAAGGAACACTGTAGCTCCGTGAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LGQQPLFLRRKA*HRKEHCSSVKV Trigger: CACCTTCACGGAGCTACAGTGTTCCTTACGATGCCACGCCTTCCTGCGCAGGAACAGCGGCTGCTGACCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
||
| 3UTR CCA 72 bp | TGCCTTTGTGCACAGTTCAGAAGGCAAGAGGTCCTCTaGGGACAGACAGCAGCCTCTGCTGAAGGGAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CLCAQFRRQEVL*GQTAASAEGKP Trigger: TGGCTTCCCTTCAGCAGAGGCTGCTGTCTGTCCCCAGAGGACCTCTTGCCTTCTGAACTGTGCACAAAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| 3UTR CCA 72 bp | CGGAGACAAACCCCCTCTGTTCCTGCTTCCCCATCCTaGTCTTGCCTTTGTGCACAGTTCAGAAGGCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RRQTPSVPASPS*SCLCAQFRRQE Trigger: CTCTTGCCTTCTGAACTGTGCACAAAGGCAAGACCAGGATGGGGAAGCAGGAACAGAGGGGGTTTGTCTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTAAACAGAGCAGGCAGAGGAGGAAATGCGGAGACAAACCCCCTCTGTTCCCAAGATGAAGGCTGCTaGCTCTGCACTTGCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TVNRAGRGGNAETNPLCSQDEGC*LCTCLL Trigger: CAGCAGGCAAGTGCAGAGCAAGCAGCCTTCATCTTG...GGAACAGAGGGGGTTTGTCTCCGCATTTCCTCCTCTGCCTGCTCTGTTTACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123507.2 |
||
| 3UTR GCA 72 bp | AGAGGAGGAAATGCGGAGACAAACCCCCTCTGTTCCTaGTTCCCCATCCTGGTCTTGCCTTTGTGCACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RGGNAETNPLCS*FPILVLPLCTV Trigger: AACTGTGCACAAAGGCAAGACCAGGATGGGGAAGCAGGAACAGAGGGGGTTTGTCTCCGCATTTCCTCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| 3UTR GCA 72 bp | ATAAAGGCTGTAGCAGAAGGCAAGATGAAGGCTGCTTaGTCTGCACTTGCCTGCTGTTTGTGCACAGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: IKAVAEGKMKAA*SALACCLCTEV Trigger: CACTTCTGTGCACAAACAGCAGGCAAGTGCAGAGCAAGCAGCCTTCATCTTGCCTTCTGCTACAGCCTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123507.2 |
||
| 3UTR GCA 72 bp | AGAGATAAAGGCTGTAGCAGAAGGCAAGATGAAGGCTaGTTGCTCTGCACTTGCCTGCTGTTTGTGCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: RDKGCSRRQDEG*LLCTCLLFVHR Trigger: TCTGTGCACAAACAGCAGGCAAGTGCAGAGCAAGCAGCCTTCATCTTGCCTTCTGCTACAGCCTTTATCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123507.2 |
||
| 3UTR TCA 72 bp | GGGACTCTAAAGCAGCAATTCTCAACCTGTGGGTTGTaGCCCCTTTGGAGGTCAAACGACTGTTTCATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GTLKQQFSTCGL*PLWRSNDCFIG Trigger: TCCTATGAAACAGTCGTTTGACCTCCAAAGGGGTCACAACCCACAGGTTGAGAATTGCTGCTTTAGAGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021160.10 |
||
| 3UTR CCA 72 bp | ACAGTTCGGGACTCTAAAGCAGCAATTCTCAACCTGTaGGTTGTGACCCCTTTGGAGGTCAAACGACTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: TVRDSKAAILNL*VVTPLEVKRLF Trigger: AAACAGTCGTTTGACCTCCAAAGGGGTCACAACCCACAGGTTGAGAATTGCTGCTTTAGAGTCCCGAACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021160.10 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTGGCCAGGAGTGAGGGCTCCCAAGGACCAGGGCACTGCACTGGAGCACCTGGCAGGGAGTGTGTaGCGCCGCTGGCAGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAWPGVRAPKDQGTALEHLAGSV*RRWQPR Trigger: CCTAGGCTGCCAGCGGCGCCACACACTCCCTGCCAG...GTGCTCCAGTGCAGTGCCCTGGTCCTTGGGAGCCCTCACTCCTGGCCAGGCTGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAGAGGAGGCTGTGACATGGGAAGTGGACCGGAGGCCCCGAGCTGCTGCGGCAGCGGAACTCACTaGCAGGGAGTGTGTGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGRGGCDMGSGPEAPSCCGSGTH*QGVCGA Trigger: GGCGCCACACACTCCCTGCCAGTGAGTTCCGCTGCC...GCAGCAGCTCGGGGCCTCCGGTCCACTTCCCATGTCACAGCCTCCTCTGCCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| CDS-3UTR GCA 90 bp | CGGAAGGTTCTGTGCACCGCCAGTACGTGCAGGTGGGCTGTGCGGCCTCCGGGCGTCCCAAGTGGCAGGTaGAGGGCCTCAGGTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKVLCTASTCRWAVRPPGVPSGR*RASGFR Trigger: CCTGAAACCTGAGGCCCTGCACCTGCCACTTGGGAC...GCCCGGAGGCCGCACAGCCCACCTGCACGTACTGGCGGTGCACAGAACCTTCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
||
| CDS-3UTR GCA 90 bp | AGGGATGTCAGCCTGGCCAGGAGTGAGGGCTCCCAAGGACCAGGGCACTGCACTCGTGCAGGTGGGCTGTaGGGCCTCCGGGCCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RDVSLARSEGSQGPGHCTRAGGL*GLRACV Trigger: TACACAGGCCCGGAGGCCGCACAGCCCACCTGCACG...AGTGCAGTGCCCTGGTCCTTGGGAGCCCTCACTCCTGGCCAGGCTGACATCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153476.8 |
||
| CDS-3UTR GCA 90 bp | TCCCGGCTCCTGGCTGCCCCTCATCCCCAGCGTTCGGAGCTAGGAAGGGATGTCAGCAGCCGCTGTTCCTaGGCAGGAAGGCGTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SRLLAAPHPQRSELGRDVSSRCS*AGRRGI Trigger: GATGCCACGCCTTCCTGCGCAGGAACAGCGGCTGCT...GACATCCCTTCCTAGCTCCGAACGCTGGGGATGAGGGGCAGCCAGGAGCCGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153476.8 |
||
| CDS-3UTR TCA 90 bp | CCGGCTCCTGGCTGCCCCTCATCCCCAGCGTTCGGAGCTAGGAAGGGATGTCAGTGGCATCCTCAGGTGTaGGGCAGCGGAACTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAPGCPSSPAFGARKGCQWHPQV*GSGTHW Trigger: CCAGTGAGTTCCGCTGCCTCACACCTGAGGATGCCA...CTGACATCCCTTCCTAGCTCCGAACGCTGGGGATGAGGGGCAGCCAGGAGCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGAAGTGGACCGGAGGCCCCGAGCTGCTGCTCCCACCCTCGCCATGGCCAACTCAAACCAGCCCAGTaGCAGCTCTGGACACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MGSGPEAPSCCSHPRHGQLKPAQ*QLWTQG Trigger: ACCCTGTGTCCAGAGCTGTCACTGGGCTGGTTTGAG...TTGGCCATGGCGAGGGTGGGAGCAGCAGCTCGGGGCCTCCGGTCCACTTCCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000153476.8 |
||
| CDS-3UTR GCA 90 bp | GAGGCAGAGGAGGCTGTGACATGGGAAGTGGACCGGAGGCCCCGAGCTGCTGCTGTCCCAAGTGGCAGGTaGAGGGCCTCAGGTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EAEEAVTWEVDRRPRAAAVPSGR*RASGFR Trigger: CCTGAAACCTGAGGCCCTGCACCTGCCACTTGGGAC...AGCAGCAGCTCGGGGCCTCCGGTCCACTTCCCATGTCACAGCCTCCTCTGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGCACACAGCTTGGGTCAGCAGCCGCTGTTCCTGCGCAGGAAGGCGTGGCATGGCATCCTCAGGTGTaGGGCAGCGGAACTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSTQLGSAAAVPAQEGVAWHPQV*GSGTHW Trigger: CCAGTGAGTTCCGCTGCCTCACACCTGAGGATGCCA...TGCCACGCCTTCCTGCGCAGGAACAGCGGCTGCTGACCCAAGCTGTGTGCTTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGAAATGCGGAGACAAACCCCCTCTGTTCCTGCTTCCCCATCCTGGTCTTGGGGCATCCTCACACATaGGCACAGCCCGGCGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GGNAETNPLCSCFPILVLGHPHT*AQPGAR Trigger: CCGTGCGCCGGGCTGTGCTCATGTGTGAGGATGCCC...CAAGACCAGGATGGGGAAGCAGGAACAGAGGGGGTTTGTCTCCGCATTTCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000153476.8 |
||
| CDS-3UTR CCA 90 bp | AGACAGCAGCCTCTGCTGAAGGGAAGCCACCTCCTGTCCTCTTTATTGGCCCTTCTGGCAGGGAGTGTGTaGCGCCGCTGGCAGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQQPLLKGSHLLSSLLALLAGSV*RRWQPR Trigger: CCTAGGCTGCCAGCGGCGCCACACACTCCCTGCCAG...AAGGGCCAATAAAGAGGACAGGAGGTGGCTTCCCTTCAGCAGAGGCTGCTGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCGGAGACAAACCCCCTCTGTTCCTGCTTCCCCATCCTGGTCTTGCCTTTCTGGCAGGGAGTGTGTaGCGCCGCTGGCAGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KCGDKPPLFLLPHPGLAFLAGSV*RRWQPR Trigger: CCTAGGCTGCCAGCGGCGCCACACACTCCCTGCCAG...AAAGGCAAGACCAGGATGGGGAAGCAGGAACAGAGGGGGTTTGTCTCCGCATTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACCAGGGCACTGCACTGGAGCACAGTAAACAGAGCAGGCAGAGGAGGAAAGCACGGCCGGCTGACTaGCCAGGTGGTGAAGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: KDQGTALEHSKQSRQRRKARPAD*PGGEGI Trigger: GATACCTTCACCACCTGGGCAGTCAGCCGGCCGTGC...TTTCCTCCTCTGCCTGCTCTGTTTACTGTGCTCCAGTGCAGTGCCCTGGTCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153476.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTAAACAGAGCAGGCAGAGGAGGAAATGCGGAGACAAACCCCCTCTGTTCCGGCAGCGGAACTCACTaGCAGGGAGTGTGTGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVNRAGRGGNAETNPLCSGSGTH*QGVCGA Trigger: GGCGCCACACACTCCCTGCCAGTGAGTTCCGCTGCC...GGAACAGAGGGGGTTTGTCTCCGCATTTCCTCCTCTGCCTGCTCTGTTTACTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| CDS-3UTR TCA 90 bp | TCCCCATCCTGGTCTTGCCTTTGTGCACAGTTCAGAAGGCAAGAGGTCCTCTGGTGGCATCCTCAGGTGTaGGGCAGCGGAACTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSWSCLCAQFRRQEVLWWHPQV*GSGTHW Trigger: CCAGTGAGTTCCGCTGCCTCACACCTGAGGATGCCA...CCAGAGGACCTCTTGCCTTCTGAACTGTGCACAAAGGCAAGACCAGGATGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| CDS-3UTR GCA 90 bp | TCCCCATCCTGGTCTTGCCTTTGTGCACAGTTCAGAAGGCAAGAGGTCCTCTGGGTCCCAAGTGGCAGGTaGAGGGCCTCAGGTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSWSCLCAQFRRQEVLWVPSGR*RASGFR Trigger: CCTGAAACCTGAGGCCCTGCACCTGCCACTTGGGAC...CCAGAGGACCTCTTGCCTTCTGAACTGTGCACAAAGGCAAGACCAGGATGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| CDS-3UTR GCA 90 bp | AGGACCAGGGCACTGCACTGGAGCACAGTAAACAGAGCAGGCAGAGGAGGAAATACAGAGCCCTTGCCCTaGTGCCGGAAGGTTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTRALHWSTVNRAGRGGNTEPLP*CRKVLC Trigger: GCACAGAACCTTCCGGCAGCAGGGCAAGGGCTCTGT...ATTTCCTCCTCTGCCTGCTCTGTTTACTGTGCTCCAGTGCAGTGCCCTGGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153476.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCCCATCCTGGTCTTGCCTTTGTGCACAGTTCAGAAGGCAAGAGGTCCTGGAGGACAGAGCCCTTaGCCTGCTGCCGGAAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CFPILVLPLCTVQKARGPGGQSP*PAAGRF Trigger: GAACCTTCCGGCAGCAGGGCAAGGGCTCTGTCCTCC...AGGACCTCTTGCCTTCTGAACTGTGCACAAAGGCAAGACCAGGATGGGGAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153476.8 |
||
| 3UTR CAA 72 bp | CCTCTGCTGAAGGGAAGCCACCTCCTGTCCTCTTTATaGGCCCTTACCTCTGTACTCCAGTTGGGAACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLLKGSHLLSSL*ALTSVLQLGTA Trigger: AGCGGTTCCCAACTGGAGTACAGAGGTAAGGGCCAATAAAGAGGACAGGAGGTGGCTTCCCTTCAGCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| 3UTR CAA 72 bp | ACAAACCCCCTCTGTTCCTGCTTCCCCATCCTGGTCTaGCCTTTGTGCACAGTTCAGAAGGCAAGAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TNPLCSCFPILV*PLCTVQKARGP Trigger: AGGACCTCTTGCCTTCTGAACTGTGCACAAAGGCAAGACCAGGATGGGGAAGCAGGAACAGAGGGGGTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| CDS-3UTR TCA 90 bp | GACTCTAAAGCAGCAATTCTCAACCTGTGGGTTGTGACCCCTTTGGAGGTCAAACTCAAACCAGCCCAGTaGCAGCTCTGGACACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DSKAAILNLWVVTPLEVKLKPAQ*QLWTQG Trigger: ACCCTGTGTCCAGAGCTGTCACTGGGCTGGTTTGAG...TTTGACCTCCAAAGGGGTCACAACCCACAGGTTGAGAATTGCTGCTTTAGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021160.10 |
||
| 3UTR CAA 72 bp | GATAAAGGCTGTAGCAGAAGGCAAGATGAAGGCTGCTaGCTCTGCACTTGCCTGCTGTTTGTGCACAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DKGCSRRQDEGC*LCTCLLFVHRS Trigger: ACTTCTGTGCACAAACAGCAGGCAAGTGCAGAGCAAGCAGCCTTCATCTTGCCTTCTGCTACAGCCTTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123507.2 |
||
| CDS CCA 90 bp | GGTGTGAGGCAGCGGAACTCACTGGCAGGGAGTGTGTGGCGCCGCTaGCAGCCTAGGAACTCTGAGGTCCCAAGTGGCAGGTGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GVRQRNSLAGSVWRR*QPRNSEVPSGRCRA Trigger: GGCCCTGCACCTGCCACTTGGGACCTCAGAGTTCCTAGGCTGCCAGCGGCGCCACACACTCCCTGCCAGTGAGTTCCGCTGCCTCACACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| CDS CCA 90 bp | GCATCCTCAGGTGTGAGGCAGCGGAACTCACTGGCAGGGAGTGTGTaGCGCCGCTGGCAGCCTAGGAACTCTGAGGTCCCAAGTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASSGVRQRNSLAGSV*RRWQPRNSEVPSGR Trigger: CCTGCCACTTGGGACCTCAGAGTTCCTAGGCTGCCAGCGGCGCCACACACTCCCTGCCAGTGAGTTCCGCTGCCTCACACCTGAGGATGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
||
| CDS TCA 90 bp | AGGCTTCCCGCTCAATCTCAAACGCACTGGTGGCATCCTCAGGTGTaGGGCAGCGGAACTCACTGGCAGGGAGTGTGTGGCGCCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLPAQSQTHWWHPQV*GSGTHWQGVCGAAG Trigger: GCCAGCGGCGCCACACACTCCCTGCCAGTGAGTTCCGCTGCCTCACACCTGAGGATGCCACCAGTGCGTTTGAGATTGAGCGGGAAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021160.10 ENSMUST00000153476.8 |
||
| CDS TCA 90 bp | GAGCTTCCCGCTCAATCTCAAACGCACTGGTGGCATCCTCAGGTGTaGGGCAGCGGAACTCACTGGCAGGGAGTGTGTGGCGCCGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: ELPAQSQTHWWHPQV*GSGTHWQGVCGAAG Trigger: GCCAGCGGCGCCACACACTCCCTGCCAGTGAGTTCCGCTGCCTCACACCTGAGGATGCCACCAGTGCGTTTGAGATTGAGCGGGAAGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123507.2 |
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| CDS CCA 72 bp | CAGCGGAACTCACTGGCAGGGAGTGTGTGGCGCCGCTaGCAGCCTAGGAACTCTGAGGTCCCAAGTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: QRNSLAGSVWRR*QPRNSEVPSGR Trigger: CCTGCCACTTGGGACCTCAGAGTTCCTAGGCTGCCAGCGGCGCCACACACTCCCTGCCAGTGAGTTCCGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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| CDS GCA 72 bp | TGGCAGCCTAGGAACTCTGAGGTCCCAAGTGGCAGGTaGAGGGCCTCAGGTTTCAGGGAGTTGATGTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: WQPRNSEVPSGR*RASGFRELMFN Trigger: GTTGAACATCAACTCCCTGAAACCTGAGGCCCTGCACCTGCCACTTGGGACCTCAGAGTTCCTAGGCTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021160.10 ENSMUST00000123507.2 ENSMUST00000153476.8 |
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