Pregenerated sensors for AAMP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006299Ensembl transcript IDs: ENSMUST00000006462.14, ENSMUST00000178235.8, ENSMUST00000187046.2, ENSMUST00000190008.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATaGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCCTCCTAC | + |
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Preference number: 1 (lower is better) Translates to: REPQRPNPNIQRRTP*LTPANQSQRDTASY Trigger: GTAGGAGGCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| 3UTR-3UTR GCA 90 bp | GCGAATCAAAGTCAAAGAGACACGGCCTCCTACAAGGCCCCAGGGCTGGGCAGGCCCTCCTCTTCCCTCTaGACCCCGCAACTCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: ANQSQRDTASYKAPGLGRPSSSL*TPQLCW Trigger: CCAGCAGAGTTGCGGGGTGCAGAGGGAAGAGGAGGG...CCTGCCCAGCCCTGGGGCCTTGTAGGAGGCCGTGTCTCTTTGACTTTGATTCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| 3UTR-3UTR GCA 90 bp | AGCGAATCAAAGTCAAAGAGACACGGCCTCCTACAAGGCCCCAGGGCTGGGCAGCCCTCCTCTTCCCTCTaGACCCCGCAACTCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SESKSKRHGLLQGPRAGQPSSSL*TPQLCW Trigger: CCAGCAGAGTTGCGGGGTGCAGAGGGAAGAGGAGGG...CTGCCCAGCCCTGGGGCCTTGTAGGAGGCCGTGTCTCTTTGACTTTGATTCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAGACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCCAGTAAGCAGGTCAGCTaGAGGGGTCAGAAAGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: QRRTPWLTPANQSQRDTASKQVS*RGQKAV Trigger: GACTGCTTTCTGACCCCTTCAGCTGACCTGCTTACT...GGCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGAGTAAGCAGGTCAGCTaGAGGGGTCAGAAAGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: KEREPQRPNPNIQRRTPWSKQVS*RGQKAV Trigger: GACTGCTTTCTGACCCCTTCAGCTGACCTGCTTACT...CCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| 3UTR CCA 72 bp | CAAAGACCTAACCCCAACATACAAAGACGCACCCCATaGCTCACACCAGCGAATCAAAGTCAAAGAGACACG | + |
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Preference number: 3 (lower is better) Translates to: QRPNPNIQRRTP*LTPANQSQRDT Trigger: CGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR GCA 90 bp | AGCGAATCAAAGTCAAAGAGACACGGCCTCCTACAAGGCCCCAGGGCTGGGCAGGACGCGGCCACAGGTTaGAGGGCAGTTGGGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: SESKSKRHGLLQGPRAGQDAATG*RAVGAL Trigger: CAGGGCCCCAACTGCCCTGCAACCTGTGGCCGCGTC...CTGCCCAGCCCTGGGGCCTTGTAGGAGGCCGTGTCTCTTTGACTTTGATTCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | CGAATCAAAGTCAAAGAGACACGGCCTCCTACAAGGCCCCAGGGCTGGGCAGGGCCGACCACCCCTTCCTaGGGTTCCAAGACCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: RIKVKETRPPTRPQGWAGPTTPS*GSKTQP Trigger: GGGCTGGGTCTTGGAACCCCAGGAAGGGGTGGTCGG...CCCTGCCCAGCCCTGGGGCCTTGTAGGAGGCCGTGTCTCTTTGACTTTGATTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR GCA 90 bp | GCGAATCAAAGTCAAAGAGACACGGCCTCCTACAAGGCCCCAGGGCTGGGCAGGACAGGAGCCCGAGGGTaGCACTCCATCCACTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ANQSQRDTASYKAPGLGRTGARG*HSIHSR Trigger: CCTGGAGTGGATGGAGTGGCACCCTCGGGCTCCTGT...CCTGCCCAGCCCTGGGGCCTTGTAGGAGGCCGTGTCTCTTTGACTTTGATTCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | AGCGAATCAAAGTCAAAGAGACACGGCCTCCTACAAGGCCCCAGGGCTGGGCAGCCGACCACCCCTTCCTaGGGTTCCAAGACCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SESKSKRHGLLQGPRAGQPTTPS*GSKTQP Trigger: GGGCTGGGTCTTGGAACCCCAGGAAGGGGTGGTCGG...CTGCCCAGCCCTGGGGCCTTGTAGGAGGCCGTGTCTCTTTGACTTTGATTCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR GCA 90 bp | ACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCCTCCTACAAGCTGGGCCAGATCATCTaGCGGGTCCGGCGGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TPWLTPANQSQRDTASYKLGQII*RVRRAW Trigger: CCAGGCCCGCCGGACCCGGCAGATGATCTGGCCCAG...CTTGTAGGAGGCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | AAGACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCCTCCCCCCTCTCCCAGGCTaGGCTGGGAGGCGACTGTCT | + |
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Preference number: 4 (lower is better) Translates to: KTHPMAHTSESKSKRHGLPPLPG*AGRRLS Trigger: AGACAGTCGCCTCCCAGCCCAGCCTGGGAGAGGGGG...GAGGCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTT 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR TCA 90 bp | AGGGGCGTCCCTTTATCCCCCTTAACACCAGACACCATGCCAGAGGCTACAGCTGCCTCCCACAGCAGCTaGACAATGCCCGACTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: RGVPLSPLTPDTMPEATAASHSS*TMPDWC Trigger: GCACCAGTCGGGCATTGTTCAGCTGCTGTGGGAGGC...AGCTGTAGCCTCTGGCATGGTGTCTGGTGTTAAGGGGGATAAAGGGACGCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | ACAAAGACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCCGGGTCCGGCGGGCCTaGATCCAGCTCTACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: TKTHPMAHTSESKSKRHGRVRRA*IQLYHL Trigger: GAGGTGGTAGAGCTGGATCCAGGCCCGCCGGACCCG...GCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | CCTTTCCCAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCCCCCCTCTCCCAGGCTaGGCTGGGAGGCGACTGTCT | + |
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Preference number: 4 (lower is better) Translates to: PFPESWEGKEREPQRPNPPPLPG*AGRRLS Trigger: AGACAGTCGCCTCCCAGCCCAGCCTGGGAGAGGGGG...GGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTGGGAAAGG 60% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR TCA 90 bp | CAGCGAATCAAAGTCAAAGAGACACGGCCTCCTACAAGGCCCCAGGGCTGGGCAGGGCAGTTGGGGCCCTaGAAGGTCTTACAGTCACCA | + |
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Preference number: 4 (lower is better) Translates to: QRIKVKETRPPTRPQGWAGQLGP*KVLQSP Trigger: TGGTGACTGTAAGACCTTTCAGGGCCCCAACTGCCC...TGCCCAGCCCTGGGGCCTTGTAGGAGGCCGTGTCTCTTTGACTTTGATTCGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR TCA 90 bp | CCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCCTCCTACAAGGCCAGCGGCCAGAGGCATaGCACTGCAGAAGCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: PMAHTSESKSKRHGLLQGQRPEA*HCRSPR Trigger: CCTTGGGCTTCTGCAGTGTCATGCCTCTGGCCGCTG...GCCTTGTAGGAGGCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | AAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCTCACACCAGCGAATCCGGGTCCGGCGGGCCTaGATCCAGCTCTACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: KDLTPTYKDAPHGSHQRIRVRRA*IQLYHL Trigger: GAGGTGGTAGAGCTGGATCCAGGCCCGCCGGACCCG...GATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR TCA 90 bp | AGGGGCGTCCCTTTATCCCCCTTAACACCAGACACCATGCCAGAGGCTACAGCTCGACTGTCTCAGGTCTaGACACACCCACCACCTTGC | + |
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Preference number: 4 (lower is better) Translates to: RGVPLSPLTPDTMPEATARLSQV*THPPPC Trigger: GCAAGGTGGTGGGTGTGTTCAGACCTGAGACAGTCG...AGCTGTAGCCTCTGGCATGGTGTCTGGTGTTAAGGGGGATAAAGGGACGCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | CGAATCAAAGTCAAAGAGACACGGCCTCCTACAAGGCCCCAGGGCTGGGCAGGGCCAAGGTGTTGGTTTTaGGGTCCAGGCTCACACAGA | + |
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Preference number: 4 (lower is better) Translates to: RIKVKETRPPTRPQGWAGPRCWF*GPGSHR Trigger: TCTGTGTGAGCCTGGACCCCAAAACCAACACCTTGG...CCCTGCCCAGCCCTGGGGCCTTGTAGGAGGCCGTGTCTCTTTGACTTTGATTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | AGGGGCGTCCCTTTATCCCCCTTAACACCAGACACCATGCCAGAGGCTACAGCTCTGACCAGCTTGGCCTaGCAGTCTACAGAGCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: RGVPLSPLTPDTMPEATALTSLA*QSTEPV Trigger: GACTGGCTCTGTAGACTGCCAGGCCAAGCTGGTCAG...AGCTGTAGCCTCTGGCATGGTGTCTGGTGTTAAGGGGGATAAAGGGACGCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR TCA 90 bp | AAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCTGCCAGTGGTGGCACTaGCCAGCTTGGCCTGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: KNGNLKDLTPTYKDAPHGCQWWH*PAWPGS Trigger: ACTGCCAGGCCAAGCTGGTCAGTGCCACCACTGGCA...GCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR GCA 90 bp | GTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGACGCGGCCACAGGTTaGAGGGCAGTTGGGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: VGKGKNGNLKDLTPTYKDDAATG*RAVGAL Trigger: CAGGGCCCCAACTGCCCTGCAACCTGTGGCCGCGTC...GTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | AAGACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCCTCACGTCTTCCATCTCCTaGGCCAGATCATCCGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KTHPMAHTSESKSKRHGLTSSIS*ARSSGS Trigger: GGACCCGGATGATCTGGCCCAGGAGATGGAAGACGT...GAGGCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006462.14 |
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| CDS-3UTR CCA 90 bp | AAGACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCCTCTGCCATCCTGGTTGGTaGCTACACAGGTCAGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: KTHPMAHTSESKSKRHGLCHPGW*LHRSEG Trigger: GCCCTCTGACCTGTGTAGCCACCAACCAGGATGGCA...GAGGCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR TCA 90 bp | CCAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATATGCCAGTGGTGGCACTaGCCAGCTTGGCCTGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PESWEGKEREPQRPNPNICQWWH*PAWPGS Trigger: ACTGCCAGGCCAAGCTGGTCAGTGCCACCACTGGCA...TATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR TCA 90 bp | AGGGGCGTCCCTTTATCCCCCTTAACACCAGACACCATGCCAGAGGCTACAGCTGGGAAGCATCTTTGCTaGGGGCAAAGTCCAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: RGVPLSPLTPDTMPEATAGKHLC*GQSPGS Trigger: AGATCCTGGACTTTGCCCTCAGCAAAGATGCTTCCC...AGCTGTAGCCTCTGGCATGGTGTCTGGTGTTAAGGGGGATAAAGGGACGCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR GCA 90 bp | CAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACCATCCGGGCCCTCCATaGTACCGACCACCCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: QRVGKGKNGNLKDLTPTYHPGPP*YRPPLP Trigger: AGGAAGGGGTGGTCGGTAGCATGGAGGGCCCGGATG...GTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR GCA 90 bp | CAGCGAATCAAAGTCAAAGAGACACGGCCTCCTACAAGGCCCCAGGGCTGGGCAAGAGTCTTTGTGGCCTaGACACTCAAAGAGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: QRIKVKETRPPTRPQGWARVFVA*TLKEQL Trigger: GAGCTGCTCTTTGAGTGTGCAGGCCACAAAGACTCT...TGCCCAGCCCTGGGGCCTTGTAGGAGGCCGTGTCTCTTTGACTTTGATTCGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR GCA 90 bp | GAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCTCACACCATGTTGCCATCGGCTGTaGCCGCCAACAGGACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: EPQRPNPNIQRRTPWLTPCCHRL*PPTGQE Trigger: CTCCTGTCCTGTTGGCGGGCACAGCCGATGGCAACA...TGGTGTGAGCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR GCA 90 bp | AAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCTGTTGCCATCGGCTGTaGCCGCCAACAGGACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KNGNLKDLTPTYKDAPHGCCHRL*PPTGQE Trigger: CTCCTGTCCTGTTGGCGGGCACAGCCGATGGCAACA...GCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR GCA 90 bp | CCTTTCCCAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCTCCACATCCAAGTGTTaGCATCGGCTGTGCCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: PFPESWEGKEREPQRPNPSTSKC*HRLCPP Trigger: TGGCGGGCACAGCCGATGGCAACACTTGGATGTGGA...GGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTGGGAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR GCA 90 bp | CCTTTCCCAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCTGTACACCACAGCAGTaGCAGCCTCCCACAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PFPESWEGKEREPQRPNPCTPQQ*QPPTAA Trigger: AGCTGCTGTGGGAGGCTGGCACTGCTGTGGTGTACA...GGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTGGGAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR GCA 90 bp | ACAAAGACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCTGTACACCACAGCAGTaGCAGCCTCCCACAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: TKTHPMAHTSESKSKRHGCTPQQ*QPPTAA Trigger: AGCTGCTGTGGGAGGCTGGCACTGCTGTGGTGTACA...GCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | ACAAAGACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCTGCCATCCTGGTTGGTaGCTACACAGGTCAGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: TKTHPMAHTSESKSKRHGCHPGW*LHRSEG Trigger: GCCCTCTGACCTGTGTAGCCACCAACCAGGATGGCA...GCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR TCA 90 bp | GAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCTCACACCAGGGCAGTTGGGGCCCTaGAAGGTCTTACAGTCACCA | + |
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Preference number: 4 (lower is better) Translates to: EPQRPNPNIQRRTPWLTPGQLGP*KVLQSP Trigger: TGGTGACTGTAAGACCTTTCAGGGCCCCAACTGCCC...TGGTGTGAGCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR TCA 90 bp | GTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACCAGCGGCCAGAGGCATaGCACTGCAGAAGCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: VGKGKNGNLKDLTPTYKDQRPEA*HCRSPR Trigger: CCTTGGGCTTCTGCAGTGTCATGCCTCTGGCCGCTG...GTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR TCA 90 bp | TTTCCTTTCCCAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACGCCTCCCACAGCAGCTaGACAATGCCCGACTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: FPFPESWEGKEREPQRPNASHSS*TMPDWC Trigger: GCACCAGTCGGGCATTGTTCAGCTGCTGTGGGAGGC...GTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTGGGAAAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | GCGAATCAAAGTCAAAGAGACACGGCCTCCTACAAGGCCCCAGGGCTGGGCAGGACCAGACTTCTTCCTTaGTGTCTACCTGCCATACTT | + |
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Preference number: 4 (lower is better) Translates to: ANQSQRDTASYKAPGLGRTRLLP*CLPAIL Trigger: AAGTATGGCAGGTAGACACCAAGGAAGAAGTCTGGT...CCTGCCCAGCCCTGGGGCCTTGTAGGAGGCCGTGTCTCTTTGACTTTGATTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | GAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCTCACACCACTGACCAGCTTGGCCTaGCAGTCTACAGAGCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: EPQRPNPNIQRRTPWLTPLTSLA*QSTEPV Trigger: GACTGGCTCTGTAGACTGCCAGGCCAAGCTGGTCAG...TGGTGTGAGCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | CAAAGACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCCTGTGGTCTCCTGATGTaGTCACCACCAGGGAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: QRRTPWLTPANQSQRDTACGLLM*SPPGKH Trigger: ATGCTTCCCTGGTGGTGACCACATCAGGAGACCACA...GGCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | TTCCCAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACACGTCTTCCATCTCCTaGGCCAGATCATCTGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: FPESWEGKEREPQRPNPNTSSIS*ARSSAG Trigger: CCCGGCAGATGATCTGGCCCAGGAGATGGAAGACGT...GTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178235.8 |
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| CDS-3UTR TCA 90 bp | CCTTTCCCAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAGTGCAATGCAAAGGTaGCCTCACTATCATCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: PFPESWEGKEREPQRPNPSAMQR*PHYHPG Trigger: GCCCGGATGATAGTGAGGTCACCTTTGCATTGCACT...GGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTGGGAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR TCA 90 bp | ACAAAGACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCACTAGGGTGGAATCGTaGCTGAAACCAGCGCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKTHPMAHTSESKSKRHGTRVES*LKPAHV Trigger: GACATGCGCTGGTTTCAGTCACGATTCCACCCTAGT...GCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAGACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCGGGAAGCATCTTTGCTaGGGGCAAAGTCCAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TKTHPMAHTSESKSKRHGGKHLC*GQSPGS Trigger: AGATCCTGGACTTTGCCCTCAGCAAAGATGCTTCCC...GCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR TCA 90 bp | AAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCTGCTTTGTGGTCTCCTaGTGTGGTCACCACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNGNLKDLTPTYKDAPHGCFVVS*CGHHQG Trigger: TCCCTGGTGGTGACCACATCAGGAGACCACAAAGCA...GCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACTGCTTTGTGGTCTCCTaGTGTGGTCACCACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPESWEGKEREPQRPNPNCFVVS*CGHHQG Trigger: TCCCTGGTGGTGACCACATCAGGAGACCACAAAGCA...GTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACATCCGGGCCCTCCATaGTACCGACCACCCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SWEGKEREPQRPNPNIQRHPGPP*YRPPLP Trigger: AGGAAGGGGTGGTCGGTAGCATGGAGGGCCCGGATG...TCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGAACAGGAGCCCGAGGGTaGCACTCCATCCACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SWEGKEREPQRPNPNIQRTGARG*HSIHSR Trigger: CCTGGAGTGGATGGAGTGGCACCCTCGGGCTCCTGT...TCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACCACTCATGTCCCCTGTaGCCACTAGGGTGGAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: FPESWEGKEREPQRPNPNHSCPL*PLGWNR Trigger: ACGATTCCACCCTAGTGGCCACAGGGGACATGAGTG...GTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CCA 90 bp | GAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCTCACACCAGACTGCCATCCTGGTTaGTGGCTACACAGGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EPQRPNPNIQRRTPWLTPDCHPG*WLHRSE Trigger: CTCTGACCTGTGTAGCCACCAACCAGGATGGCAGTC...TGGTGTGAGCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR TCA 90 bp | AAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCACTAGGGTGGAATCGTaGCTGAAACCAGCGCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KNGNLKDLTPTYKDAPHGTRVES*LKPAHV Trigger: GACATGCGCTGGTTTCAGTCACGATTCCACCCTAGT...GCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTTCCCAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCGACTGTCTCAGGTCTaGACACACCCACCACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPFPESWEGKEREPQRPNRLSQV*THPPPC Trigger: GCAAGGTGGTGGGTGTGTTCAGACCTGAGACAGTCG...GTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTGGGAAAGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR GCA 90 bp | GAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCTCACACCACCACTCCAGGTCTCCTaGTTCAAAGGACCAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: EPQRPNPNIQRRTPWLTPPLQVS*FKGPDF Trigger: GAAGTCTGGTCCTTTGAAGCAGGAGACCTGGAGTGG...TGGTGTGAGCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACTCCACATCCAAGTGTTaGCATCGGCTGTGCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGKGKNGNLKDLTPTYKDSTSKC*HRLCPP Trigger: TGGCGGGCACAGCCGATGGCAACACTTGGATGTGGA...GTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCACTCATGTCCCCTGTaGCCACTAGGGTGGAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: KGKNGNLKDLTPTYKDAPHSCPL*PLGWNR Trigger: ACGATTCCACCCTAGTGGCCACAGGGGACATGAGTG...GGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CCA 90 bp | GACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCCTCCTGTCCCTTTTAGTACATaGATGGGGTTTCCTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DAPHGSHQRIKVKETRPPVPFST*MGFPCL Trigger: CAAGCAAGGAAACCCCATCCATGTACTAAAAGGGAC...AGGAGGCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCGACTGCCATCCTGGTTaGTGGCTACACAGGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KGKNGNLKDLTPTYKDAPDCHPG*WLHRSE Trigger: CTCTGACCTGTGTAGCCACCAACCAGGATGGCAGTC...GGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CCA 90 bp | AGCGAATCAAAGTCAAAGAGACACGGCCTCCTACAAGGCCCCAGGGCTGGGCAGAATACTTTTGCTTTGTaGTCTCCTGATGTGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SESKSKRHGLLQGPRAGQNTFAL*SPDVVT Trigger: GGTGACCACATCAGGAGACCACAAAGCAAAAGTATT...CTGCCCAGCCCTGGGGCCTTGTAGGAGGCCGTGTCTCTTTGACTTTGATTCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR TCA 90 bp | CAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAGTGCAATGCAAAGGTaGCCTCACTATCATCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QRVGKGKNGNLKDLTPTYSAMQR*PHYHPG Trigger: GCCCGGATGATAGTGAGGTCACCTTTGCATTGCACT...GTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACCACTCCAGGTCTCCTaGTTCAAAGGACCAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PESWEGKEREPQRPNPNIPLQVS*FKGPDF Trigger: GAAGTCTGGTCCTTTGAAGCAGGAGACCTGGAGTGG...TATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCCAAGGTGTTGGTTTTaGGGTCCAGGCTCACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KEREPQRPNPNIQRRTPWPRCWF*GPGSHR Trigger: TCTGTGTGAGCCTGGACCCCAAAACCAACACCTTGG...CCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGTGTGGTCTCCTGATGTaGTCACCACCAGGGAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KEREPQRPNPNIQRRTPWCGLLM*SPPGKH Trigger: ATGCTTCCCTGGTGGTGACCACATCAGGAGACCACA...CCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR TCA 90 bp | AAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCATCTCTTCATCTCCGTaGAAGCTCAGAGTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNGNLKDLTPTYKDAPHGISSSP*KLRVSR Trigger: TCTGGAGACTCTGAGCTTTCACGGAGATGAAGAGAT...GCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR TCA 90 bp | AAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCGCTCTACCACCTCAATaGTCTCTTCATCTCCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KNGNLKDLTPTYKDAPHGALPPQ*SLHLRE Trigger: TTCACGGAGATGAAGAGATCATTGAGGTGGTAGAGC...GCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR GCA 90 bp | AAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCTCACACCAGCGAATCAACACAGACGCTGAGTaGAATGCAAAGGTGACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KDLTPTYKDAPHGSHQRINTDAE*NAKVTS Trigger: TGAGGTCACCTTTGCATTGCACTCAGCGTCTGTGTT...GATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR TCA 90 bp | CAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACATCTCTTCATCTCCGTaGAAGCTCAGAGTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRVGKGKNGNLKDLTPTYISSSP*KLRVSR Trigger: TCTGGAGACTCTGAGCTTTCACGGAGATGAAGAGAT...GTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR GCA 90 bp | CAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAACACAGACGCTGAGTaGAATGCAAAGGTGACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QRVGKGKNGNLKDLTPTYNTDAE*NAKVTS Trigger: TGAGGTCACCTTTGCATTGCACTCAGCGTCTGTGTT...GTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | AGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGATCACTGCCAAGGTGTTaGTTTTGGGGTCCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SWEGKEREPQRPNPNIQRSLPRC*FWGPGS Trigger: TGAGCCTGGACCCCAAAACCAACACCTTGGCAGTGA...TCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | TTTCCTTTCCCAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACGTCACAGAGTCTTTGTaGCCTGCACACTCAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPFPESWEGKEREPQRPNVTESL*PAHSKS Trigger: GCTCTTTGAGTGTGCAGGCCACAAAGACTCTGTGAC...GTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTGGGAAAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | GTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGTCACAGAGTCTTTGTaGCCTGCACACTCAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGKGKNGNLKDLTPTYKDVTESL*PAHSKS Trigger: GCTCTTTGAGTGTGCAGGCCACAAAGACTCTGTGAC...GTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | AAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCTCACACCAGCGAATCACCAGACTTCTTCCTTaGTGTCTACCTGCCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: KDLTPTYKDAPHGSHQRITRLLP*CLPAIL Trigger: AAGTATGGCAGGTAGACACCAAGGAAGAAGTCTGGT...GATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | AAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCGTCCCTTTTAGTACATaGATGGGGTTTCCTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KNGNLKDLTPTYKDAPHGVPFST*MGFPCL Trigger: CAAGCAAGGAAACCCCATCCATGTACTAAAAGGGAC...GCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CCA 90 bp | ACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCCTCCTACAAGAATACTTTTGCTTTGTaGTCTCCTGATGTGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: TPWLTPANQSQRDTASYKNTFAL*SPDVVT Trigger: GGTGACCACATCAGGAGACCACAAAGCAAAAGTATT...CTTGTAGGAGGCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR GCA 90 bp | AAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCTCACACCAGCGAATCTCCTTGGTGTCTACCTaGCATACTTTCAAAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: KDLTPTYKDAPHGSHQRISLVST*HTFKRP Trigger: TGGTCTTTTGAAAGTATGGCAGGTAGACACCAAGGA...GATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGATCCTTGGTGTCTACCTaGCATACTTTCAAAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SWEGKEREPQRPNPNIQRSLVST*HTFKRP Trigger: TGGTCTTTTGAAAGTATGGCAGGTAGACACCAAGGA...TCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGCGTCCCTTTATCCCCCTTAACACCAGACACCATGCCAGAGGCTACAGCTGGACGCGGCCACAGGTaGCAGGGCAGTTGGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGVPLSPLTPDTMPEATAGRGHR*QGSWGP Trigger: AGGGCCCCAACTGCCCTGCAACCTGTGGCCGCGTCC...AGCTGTAGCCTCTGGCATGGTGTCTGGTGTTAAGGGGGATAAAGGGACGCCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS TCA 90 bp | GGGCCTGGATCCAGCTCTACCACCTCAATGATCTCTTCATCTCCGTaGAAGCTCAGAGTCTCCAGAGGCGGGGTGTCAGCGGCCGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GPGSSSTTSMISSSP*KLRVSRGGVSAAAP Trigger: CGGAGCGGCCGCTGACACCCCGCCTCTGGAGACTCTGAGCTTTCACGGAGATGAAGAGATCATTGAGGTGGTAGAGCTGGATCCAGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS TCA 90 bp | CATCTGCCGGGTCCGGCGGGCCTGGATCCAGCTCTACCACCTCAATaGTCTCTTCATCTCCGTGAAAGCTCAGAGTCTCCAGAGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HLPGPAGLDPALPPQ*SLHLRESSESPEAG Trigger: CCCCGCCTCTGGAGACTCTGAGCTTTCACGGAGATGAAGAGATCATTGAGGTGGTAGAGCTGGATCCAGGCCCGCCGGACCCGGCAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178235.8 |
||
| CDS GCA 90 bp | AGTCACCATTCGGGACCTTCCACATCCAAGTGTTGCCATCGGCTGTaGCCGCCAACAGGACAGGAGCCCGAGGGTGCCACTCCATCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SHHSGPSTSKCCHRL*PPTGQEPEGATPST Trigger: AGTGGATGGAGTGGCACCCTCGGGCTCCTGTCCTGTTGGCGGGCACAGCCGATGGCAACACTTGGATGTGGAAGGTCCCGAATGGTGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS GCA 90 bp | CCCTACCACAGCTCTCTTCCCATCAGGGAGGACGCGGCCACAGGTTaGAGGGCAGTTGGGGCCCTGAAAGGTCTTACAGTCACCATTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PYHSSLPIREDAATG*RAVGALKGLTVTIR Trigger: CCGAATGGTGACTGTAAGACCTTTCAGGGCCCCAACTGCCCTGCAACCTGTGGCCGCGTCCTCCCTGATGGGAAGAGAGCTGTGGTAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS TCA 90 bp | GATCATCCGGGTCCGGCGGGCCTGGATCCAGCTCTACCACCTCAATaGTCTCTTCATCTCCGTGAAAGCTCAGAGTCTCCAGAGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DHPGPAGLDPALPPQ*SLHLRESSESPEAG Trigger: CCCCGCCTCTGGAGACTCTGAGCTTTCACGGAGATGAAGAGATCATTGAGGTGGTAGAGCTGGATCCAGGCCCGCCGGACCCGGATGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006462.14 |
||
| CDS GCA 90 bp | GAAAGGTCTTACAGTCACCATTCGGGACCTTCCACATCCAAGTGTTaGCATCGGCTGTGCCCGCCAACAGGACAGGAGCCCGAGGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ERSYSHHSGPSTSKC*HRLCPPTGQEPEGA Trigger: GGCACCCTCGGGCTCCTGTCCTGTTGGCGGGCACAGCCGATGGCAACACTTGGATGTGGAAGGTCCCGAATGGTGACTGTAAGACCTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS CCA 90 bp | CTCTCTTCCCATCAGGGAGGACGCGGCCACAGGTTGCAGGGCAGTTaGGGCCCTGAAAGGTCTTACAGTCACCATTCGGGACCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSSHQGGRGHRLQGS*GPERSYSHHSGPST Trigger: TGTGGAAGGTCCCGAATGGTGACTGTAAGACCTTTCAGGGCCCCAACTGCCCTGCAACCTGTGGCCGCGTCCTCCCTGATGGGAAGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | AAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCTCACACCAGCGAATCGGACGCGGCCACAGGTaGCAGGGCAGTTGGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KDLTPTYKDAPHGSHQRIGRGHR*QGSWGP Trigger: AGGGCCCCAACTGCCCTGCAACCTGTGGCCGCGTCC...GATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS CCA 90 bp | ACCTCACTATCATCCGGGCCCTCCATGCTACCGACCACCCCTTCCTaGGGTTCCAAGACCCAGCCCTCGTCATTGCCCTCTTCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSLSSGPSMLPTTPS*GSKTQPSSLPSSSS Trigger: AGAAGAAGAAGAGGGCAATGACGAGGGCTGGGTCTTGGAACCCCAGGAAGGGGTGGTCGGTAGCATGGAGGGCCCGGATGATAGTGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 ENSMUST00000190008.2 |
||
| CDS CCA 90 bp | CCTGGCAGTCTACAGAGCCAGTCAGGATCAGACTGCCATCCTGGTTaGTGGCTACACAGGTCAGAGGGCCCTGATGACCCTCAGTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGSLQSQSGSDCHPG*WLHRSEGPDDPQSL Trigger: AAGGGACTGAGGGTCATCAGGGCCCTCTGACCTGTGTAGCCACCAACCAGGATGGCAGTCTGATCCTGACTGGCTCTGTAGACTGCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS CCA 90 bp | AACACACCCACCACCTTGCCAGTGGTGGCACTGACCAGCTTGGCCTaGCAGTCTACAGAGCCAGTCAGGATCAGACTGCCATCCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NTPTTLPVVALTSLA*QSTEPVRIRLPSWL Trigger: CAACCAGGATGGCAGTCTGATCCTGACTGGCTCTGTAGACTGCCAGGCCAAGCTGGTCAGTGCCACCACTGGCAAGGTGGTGGGTGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | GACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCCTCCTGTGGCACTGACCAGCTaGGCCTGGCAGTCTACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DAPHGSHQRIKVKETRPPVALTS*AWQSTE Trigger: CTCTGTAGACTGCCAGGCCAAGCTGGTCAGTGCCAC...AGGAGGCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGCGTCCCTTTATCCCCCTTAACACCAGACACCATGCCAGAGGCTACAGCTAACACACCCACCACCTaGCCAGTGGTGGCACTGACC | + |
|
Preference number: 5 (lower is better) Translates to: RGVPLSPLTPDTMPEATANTPTT*PVVALT Trigger: GGTCAGTGCCACCACTGGCAAGGTGGTGGGTGTGTT...AGCTGTAGCCTCTGGCATGGTGTCTGGTGTTAAGGGGGATAAAGGGACGCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS GCA 90 bp | AGAGACGTACAACACCATCCAGGCTACAGGTGTACACCACAGCAGTaGCAGCCTCCCACAGCAGCTGAACAATGCCCGACTGGTGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RDVQHHPGYRCTPQQ*QPPTAAEQCPTGAD Trigger: GTCAGCACCAGTCGGGCATTGTTCAGCTGCTGTGGGAGGCTGGCACTGCTGTGGTGTACACCTGTAGCCTGGATGGTGTTGTACGTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS CCA 90 bp | GGCAGTCTACAGAGCCAGTCAGGATCAGACTGCCATCCTGGTTGGTaGCTACACAGGTCAGAGGGCCCTGATGACCCTCAGTCCCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GSLQSQSGSDCHPGW*LHRSEGPDDPQSLL Trigger: TAAAAGGGACTGAGGGTCATCAGGGCCCTCTGACCTGTGTAGCCACCAACCAGGATGGCAGTCTGATCCTGACTGGCTCTGTAGACTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCCTCCTACAAGGCCAAGGTGTTGGTTTaGGGGTCCAGGCTCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: TPWLTPANQSQRDTASYKAKVLV*GSRLTQ Trigger: CTGTGTGAGCCTGGACCCCAAAACCAACACCTTGGC...CTTGTAGGAGGCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | GAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCTCACACCAGTCACTGCCAAGGTGTaGGTTTTGGGGTCCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EPQRPNPNIQRRTPWLTPVTAKV*VLGSRL Trigger: GAGCCTGGACCCCAAAACCAACACCTTGGCAGTGAC...TGGTGTGAGCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | AAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCGTCACTGCCAAGGTGTaGGTTTTGGGGTCCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KNGNLKDLTPTYKDAPHGVTAKV*VLGSRL Trigger: GAGCCTGGACCCCAAAACCAACACCTTGGCAGTGAC...GCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCAGACTGCCATCCTGGTaGGTGGCTACACAGGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TKTHPMAHTSESKSKRHGRLPSW*VATQVR Trigger: TCTGACCTGTGTAGCCACCAACCAGGATGGCAGTCT...GCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACGTGGCACTGACCAGCTaGGCCTGGCAGTCTACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QRVGKGKNGNLKDLTPTYVALTS*AWQSTE Trigger: CTCTGTAGACTGCCAGGCCAAGCTGGTCAGTGCCAC...GTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS TCA 90 bp | AAAGACCACTCATGTCCCCTGTGGCCACTAGGGTGGAATCGTGACTaGAACCAGCGCATGTCACAGAGTCTTTGTGGCCTGCACACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: KDHSCPLWPLGWNRD*NQRMSQSLCGLHTQ Trigger: TTGAGTGTGCAGGCCACAAAGACTCTGTGACATGCGCTGGTTTCAGTCACGATTCCACCCTAGTGGCCACAGGGGACATGAGTGGTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 ENSMUST00000187046.2 |
||
| CDS TCA 90 bp | TTCAAAAGACCACTCATGTCCCCTGTGGCCACTAGGGTGGAATCGTaGCTGAAACCAGCGCATGTCACAGAGTCTTTGTGGCCTGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: FKRPLMSPVATRVES*LKPAHVTESLWPAH Trigger: GTGTGCAGGCCACAAAGACTCTGTGACATGCGCTGGTTTCAGTCACGATTCCACCCTAGTGGCCACAGGGGACATGAGTGGTCTTTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 ENSMUST00000187046.2 |
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| CDS-3UTR CAA 90 bp | CAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACGCCAAGGTGTTGGTTTaGGGGTCCAGGCTCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: QRVGKGKNGNLKDLTPTYAKVLV*GSRLTQ Trigger: CTGTGTGAGCCTGGACCCCAAAACCAACACCTTGGC...GTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTTCCCAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACTTCCACATCCAAGTGTaGCCATCGGCTGTGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: FPFPESWEGKEREPQRPNFHIQV*PSAVPA Trigger: GGCGGGCACAGCCGATGGCAACACTTGGATGTGGAA...GTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTGGGAAAGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCATGGGGTTTCCTTGCTaGAGGTCCCAGATCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TKTHPMAHTSESKSKRHGMGFPC*RSQILM Trigger: CATCAGGATCTGGGACCTCAAGCAAGGAAACCCCAT...GCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | AAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCACCAGGGAAGCATCTTaGCTGAGGGCAAAGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KNGNLKDLTPTYKDAPHGTREAS*LRAKSR Trigger: CCTGGACTTTGCCCTCAGCAAAGATGCTTCCCTGGT...GCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CAA 90 bp | AAAGACCTAACCCCAACATACAAAGACGCACCCCATGGCTCACACCAGCGAATCATGGGGTTTCCTTGCTaGAGGTCCCAGATCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: KDLTPTYKDAPHGSHQRIMGFPC*RSQILM Trigger: CATCAGGATCTGGGACCTCAAGCAAGGAAACCCCAT...GATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGACGCACCCAGACTGCCATCCTGGTaGGTGGCTACACAGGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KGKNGNLKDLTPTYKDAPRLPSW*VATQVR Trigger: TCTGACCTGTGTAGCCACCAACCAGGATGGCAGTCT...GGGTGCGTCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACCCCAACATACAAAGAAACACACCCACCACCTaGCCAGTGGTGGCACTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SWEGKEREPQRPNPNIQRNTPTT*PVVALT Trigger: GGTCAGTGCCACCACTGGCAAGGTGGTGGGTGTGTT...TCTTTGTATGTTGGGGTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTTCCCAGAGAGTTGGGAAGGGAAAGAACGGGAACCTCAAAGACCTAACACCAGGGAAGCATCTTaGCTGAGGGCAAAGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FPFPESWEGKEREPQRPNTREAS*LRAKSR Trigger: CCTGGACTTTGCCCTCAGCAAAGATGCTTCCCTGGT...GTTAGGTCTTTGAGGTTCCCGTTCTTTCCCTTCCCAACTCTCTGGGAAAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS TCA 90 bp | ACGGTCAGGTCTCTGGACACAAAATACTTTTGCTTTGTGGTCTCCTaGTGTGGTCACCACCAGGGAAGCATCTTTGCTGAGGGCAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TVRSLDTKYFCFVVS*CGHHQGSIFAEGKV Trigger: GACTTTGCCCTCAGCAAAGATGCTTCCCTGGTGGTGACCACATCAGGAGACCACAAAGCAAAAGTATTTTGTGTCCAGAGACCTGACCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCCGGACACAAAATACTTTaGCTTTGTGGTCTCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QRRTPWLTPANQSQRDTAGHKIL*LCGLLM Trigger: CATCAGGAGACCACAAAGCAAAAGTATTTTGTGTCC...GGCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS-3UTR CAA 90 bp | ACAAAGACGCACCCCATGGCTCACACCAGCGAATCAAAGTCAAAGAGACACGGCGGACACAAAATACTTTaGCTTTGTGGTCTCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TKTHPMAHTSESKSKRHGGHKIL*LCGLLM Trigger: CATCAGGAGACCACAAAGCAAAAGTATTTTGTGTCC...GCCGTGTCTCTTTGACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS GCA 72 bp | TCGGGACCTTCCACATCCAAGTGTTGCCATCGGCTGTaGCCGCCAACAGGACAGGAGCCCGAGGGTGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SGPSTSKCCHRL*PPTGQEPEGAT Trigger: AGTGGCACCCTCGGGCTCCTGTCCTGTTGGCGGGCACAGCCGATGGCAACACTTGGATGTGGAAGGTCCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS CCA 72 bp | TCATCCGGGCCCTCCATGCTACCGACCACCCCTTCCTaGGGTTCCAAGACCCAGCCCTCGTCATTGCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSGPSMLPTTPS*GSKTQPSSLPS Trigger: AGAGGGCAATGACGAGGGCTGGGTCTTGGAACCCCAGGAAGGGGTGGTCGGTAGCATGGAGGGCCCGGATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 ENSMUST00000190008.2 |
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| CDS CCA 72 bp | GGGCGGGGAGGGGGAGAGAGGCTAGGTCTGAAGATCTaGTGTTGGCCAGCGACCGTGTGGGAAGAGAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: GRGGGERLGLKI*CWPATVWEERT Trigger: TGTCCTCTCTTCCCACACGGTCGCTGGCCAACACCAGATCTTCAGACCTAGCCTCTCTCCCCCTCCCCGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190008.2 |
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| CDS CCA 72 bp | GGAGGGGGAGAGAGGCTAGGTCTGAAGATCTGGTGTTaGCCAGCGACCGTGTGGGAAGAGAGGACAGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGGERLGLKIWC*PATVWEERTEG Trigger: GCCCTCTGTCCTCTCTTCCCACACGGTCGCTGGCCAACACCAGATCTTCAGACCTAGCCTCTCTCCCCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190008.2 |
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| CDS TCA 72 bp | AGGACGCGGCCACAGGTTGCAGGGCAGTTGGGGCCCTaGAAGGTCTTACAGTCACCATTCGGGACCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RTRPQVAGQLGP*KVLQSPFGTFH Trigger: GTGGAAGGTCCCGAATGGTGACTGTAAGACCTTTCAGGGCCCCAACTGCCCTGCAACCTGTGGCCGCGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS GCA 72 bp | AGCTCTCTTCCCATCAGGGAGGACGCGGCCACAGGTTaGAGGGCAGTTGGGGCCCTGAAAGGTCTTACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSLPIREDAATG*RAVGALKGLTV Trigger: GACTGTAAGACCTTTCAGGGCCCCAACTGCCCTGCAACCTGTGGCCGCGTCCTCCCTGATGGGAAGAGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS CCA 72 bp | CTCCTGGGCCAGATCATCTGCCGGGTCCGGCGGGCCTaGATCCAGCTCTACCACCTCAATGATCTCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LLGQIICRVRRA*IQLYHLNDLFI Trigger: GATGAAGAGATCATTGAGGTGGTAGAGCTGGATCCAGGCCCGCCGGACCCGGCAGATGATCTGGCCCAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178235.8 |
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| CDS CAA 72 bp | CAGCTCTCTTCCCATCAGGGAGGACGCGGCCACAGGTaGCAGGGCAGTTGGGGCCCTGAAAGGTCTTACAGT | + |
|
Preference number: 6 (lower is better) Translates to: QLSSHQGGRGHR*QGSWGPERSYS Trigger: ACTGTAAGACCTTTCAGGGCCCCAACTGCCCTGCAACCTGTGGCCGCGTCCTCCCTGATGGGAAGAGAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS CAA 90 bp | ACCCTACCACAGCTCTCTTCCCATCAGGGAGGACGCGGCCACAGGTaGCAGGGCAGTTGGGGCCCTGAAAGGTCTTACAGTCACCATTCG | + |
|
Preference number: 6 (lower is better) Translates to: TLPQLSSHQGGRGHR*QGSWGPERSYSHHS Trigger: CGAATGGTGACTGTAAGACCTTTCAGGGCCCCAACTGCCCTGCAACCTGTGGCCGCGTCCTCCCTGATGGGAAGAGAGCTGTGGTAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS CAA 90 bp | GGTCTGAACACACCCACCACCTTGCCAGTGGTGGCACTGACCAGCTaGGCCTGGCAGTCTACAGAGCCAGTCAGGATCAGACTGCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: GLNTPTTLPVVALTS*AWQSTEPVRIRLPS Trigger: GGATGGCAGTCTGATCCTGACTGGCTCTGTAGACTGCCAGGCCAAGCTGGTCAGTGCCACCACTGGCAAGGTGGTGGGTGTGTTCAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS GCA 72 bp | TACAGTCACCATTCGGGACCTTCCACATCCAAGTGTTaGCATCGGCTGTGCCCGCCAACAGGACAGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: YSHHSGPSTSKC*HRLCPPTGQEP Trigger: GGGCTCCTGTCCTGTTGGCGGGCACAGCCGATGGCAACACTTGGATGTGGAAGGTCCCGAATGGTGACTGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS GCA 72 bp | TGGCCTGGCAGTCTACAGAGCCAGTCAGGATCAGACTaGCATCCTGGTTGGTGGCTACACAGGTCAGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WPGSLQSQSGSD*HPGWWLHRSEG Trigger: GCCCTCTGACCTGTGTAGCCACCAACCAGGATGGCAGTCTGATCCTGACTGGCTCTGTAGACTGCCAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS CCA 72 bp | CATCTCCTGGGCCAGATCATCCGGGTCCGGCGGGCCTaGATCCAGCTCTACCACCTCAATGATCTCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: HLLGQIIRVRRA*IQLYHLNDLFI Trigger: GATGAAGAGATCATTGAGGTGGTAGAGCTGGATCCAGGCCCGCCGGACCCGGATGATCTGGCCCAGGAGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006462.14 |
||
| CDS CCA 72 bp | ACCACCTTGCCAGTGGTGGCACTGACCAGCTTGGCCTaGCAGTCTACAGAGCCAGTCAGGATCAGACTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TTLPVVALTSLA*QSTEPVRIRLP Trigger: TGGCAGTCTGATCCTGACTGGCTCTGTAGACTGCCAGGCCAAGCTGGTCAGTGCCACCACTGGCAAGGTGGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS CAA 72 bp | ACACCCACCACCTTGCCAGTGGTGGCACTGACCAGCTaGGCCTGGCAGTCTACAGAGCCAGTCAGGATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TPTTLPVVALTS*AWQSTEPVRIR Trigger: TCTGATCCTGACTGGCTCTGTAGACTGCCAGGCCAAGCTGGTCAGTGCCACCACTGGCAAGGTGGTGGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS GCA 72 bp | CAACACCATCCAGGCTACAGGTGTACACCACAGCAGTaGCAGCCTCCCACAGCAGCTGAACAATGCCCGACT | + |
|
Preference number: 6 (lower is better) Translates to: QHHPGYRCTPQQ*QPPTAAEQCPT Trigger: AGTCGGGCATTGTTCAGCTGCTGTGGGAGGCTGGCACTGCTGTGGTGTACACCTGTAGCCTGGATGGTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS CAA 72 bp | TCGTCTTCGCCCCCTGTCACTGCCAAGGTGTTGGTTTaGGGGTCCAGGCTCACACAGAACACAGACGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSPPVTAKVLV*GSRLTQNTDAE Trigger: CTCAGCGTCTGTGTTCTGTGTGAGCCTGGACCCCAAAACCAACACCTTGGCAGTGACAGGGGGCGAAGACGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 ENSMUST00000187046.2 |
||
| CDS CAA 72 bp | TTACAGTCACCATTCGGGACCTTCCACATCCAAGTGTaGCCATCGGCTGTGCCCGCCAACAGGACAGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LQSPFGTFHIQV*PSAVPANRTGA Trigger: GGCTCCTGTCCTGTTGGCGGGCACAGCCGATGGCAACACTTGGATGTGGAAGGTCCCGAATGGTGACTGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS CAA 90 bp | AAGGCCTTGTCGTCTTCGCCCCCTGTCACTGCCAAGGTGTTGGTTTaGGGGTCCAGGCTCACACAGAACACAGACGCTGAGTGCAATGCA | + |
|
Preference number: 6 (lower is better) Translates to: KALSSSPPVTAKVLV*GSRLTQNTDAECNA Trigger: TGCATTGCACTCAGCGTCTGTGTTCTGTGTGAGCCTGGACCCCAAAACCAACACCTTGGCAGTGACAGGGGGCGAAGACGACAAGGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 ENSMUST00000187046.2 |
||
| CDS TCA 72 bp | GGTCCGGCGGGCCTGGATCCAGCTCTACCACCTCAATaGTCTCTTCATCTCCGTGAAAGCTCAGAGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GPAGLDPALPPQ*SLHLRESSESP Trigger: TGGAGACTCTGAGCTTTCACGGAGATGAAGAGATCATTGAGGTGGTAGAGCTGGATCCAGGCCCGCCGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS GCA 72 bp | AGCCCGAGGGTGCCACTCCATCCACTCCAGGTCTCCTaGTTCAAAGGACCAGACTTCTTCCTTGGTGTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: SPRVPLHPLQVS*FKGPDFFLGVY Trigger: GTAGACACCAAGGAAGAAGTCTGGTCCTTTGAAGCAGGAGACCTGGAGTGGATGGAGTGGCACCCTCGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
||
| CDS TCA 72 bp | TCATGTCCCCTGTGGCCACTAGGGTGGAATCGTGACTaGAACCAGCGCATGTCACAGAGTCTTTGTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SCPLWPLGWNRD*NQRMSQSLCGL Trigger: CAGGCCACAAAGACTCTGTGACATGCGCTGGTTTCAGTCACGATTCCACCCTAGTGGCCACAGGGGACATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 ENSMUST00000187046.2 |
||
| CDS TCA 72 bp | CCACTCATGTCCCCTGTGGCCACTAGGGTGGAATCGTaGCTGAAACCAGCGCATGTCACAGAGTCTTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PLMSPVATRVES*LKPAHVTESLW Trigger: CCACAAAGACTCTGTGACATGCGCTGGTTTCAGTCACGATTCCACCCTAGTGGCCACAGGGGACATGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 ENSMUST00000187046.2 |
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| CDS TCA 72 bp | TCACACAGAACACAGACGCTGAGTGCAATGCAAAGGTaGCCTCACTATCATCCGGGCCCTCCATGCTACCGA | + |
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Preference number: 6 (lower is better) Translates to: SHRTQTLSAMQR*PHYHPGPPCYR Trigger: TCGGTAGCATGGAGGGCCCGGATGATAGTGAGGTCACCTTTGCATTGCACTCAGCGTCTGTGTTCTGTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 ENSMUST00000187046.2 ENSMUST00000190008.2 |
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| CDS GCA 72 bp | CCCTCAGTCCCTTTTAGTACATGGATGGGGTTTCCTTaGTTGAGGTCCCAGATCCTGATGGTACCATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PSVPFSTWMGFP*LRSQILMVPSS Trigger: TGAAGATGGTACCATCAGGATCTGGGACCTCAAGCAAGGAAACCCCATCCATGTACTAAAAGGGACTGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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| CDS TCA 72 bp | TCTCTGGACACAAAATACTTTTGCTTTGTGGTCTCCTaGTGTGGTCACCACCAGGGAAGCATCTTTGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SLDTKYFCFVVS*CGHHQGSIFAE Trigger: CTCAGCAAAGATGCTTCCCTGGTGGTGACCACATCAGGAGACCACAAAGCAAAAGTATTTTGTGTCCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006462.14 ENSMUST00000178235.8 |
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