Pregenerated sensors for AAMDC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035642Ensembl transcript IDs: ENSMUST00000042627.16, ENSMUST00000072725.12, ENSMUST00000124552.3, ENSMUST00000126085.8, ENSMUST00000136757.8, ENSMUST00000138060.3, ENSMUST00000144858.8, ENSMUST00000154779.8, ENSMUST00000154853.8, ENSMUST00000178078.8
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGCCATCAGCAGGTGGAATGGAAGACACCTCCTACCCTGACCCCTTaGGCAACCAAGGCATTATACTCCTTCACGGCCTGCTCTGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: RHQQVEWKTPPTLTP*ATKALYSFTACSVW Trigger: CCAGACAGAGCAGGCCGTGAAGGAGTATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGGAGGTGTCTTCCATTCCACCTGCTGATGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR TCA 90 bp | TCTGTAGGCGCCATCAGCAGGTGGAATGGAAGACACCTCCTACCCTaGCCCCTTGGGCAACCAAGGCATTATACTCCTTCACGGCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: SVGAISRWNGRHLLP*PLGQPRHYTPSRPA Trigger: AGCAGGCCGTGAAGGAGTATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGGAGGTGTCTTCCATTCCACCTGCTGATGGCGCCTACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR GCA 90 bp | ACCCTGACCCCTTGGGCAACCAAGGCATTATACTCCTTCACGGCCTaGTCTGTCTGGAGGACCCGCACATCAATGCCTTGTTTCTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: TLTPWATKALYSFTA*SVWRTRTSMPCFSR Trigger: CCTGGAGAAACAAGGCATTGATGTGCGGGTCCTCCAGACAGAGCAGGCCGTGAAGGAGTATAATGCCTTGGTTGCCCAAGGGGTCAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR CCA 90 bp | CCTTGGGCAACCAAGGCATTATACTCCTTCACGGCCTGCTCTGTCTaGAGGACCCGCACATCAATGCCTTGTTTCTCCAGGTACTCCACA | + |
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Preference number: 1 (lower is better) Translates to: PWATKALYSFTACSV*RTRTSMPCFSRYST Trigger: TGTGGAGTACCTGGAGAAACAAGGCATTGATGTGCGGGTCCTCCAGACAGAGCAGGCCGTGAAGGAGTATAATGCCTTGGTTGCCCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR CCA 90 bp | CACAAGAGTCTGTACCCCTTTCTCAGCAACTTCCTTTACATCTGCTaGCTGCACTCCAGGAGAATGCTCGGTTCCTGTTTCTCTCCAGTC | + |
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Preference number: 1 (lower is better) Translates to: HKSLYPFLSNFLYIC*LHSRRMLGSCFSPV Trigger: GACTGGAGAGAAACAGGAACCGAGCATTCTCCTGGAGTGCAGCCAGCAGATGTAAAGGAAGTTGCTGAGAAAGGGGTACAGACTCTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR CCA 90 bp | ACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTTTGTaGTCTGATTTATTCTCCTCTGTAGGCGCCATCAGCAGGTGGAAT | + |
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Preference number: 1 (lower is better) Translates to: TVEADVETGKTAKAL*SDLFSSVGAISRWN Trigger: ATTCCACCTGCTGATGGCGCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126085.8 |
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| 3UTR TCA 90 bp | TGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATaGACATATGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTG | + |
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Preference number: 1 (lower is better) Translates to: CKTCASASHQSVPRT*TYVQNTQWRLMWRL Trigger: CAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR GCA 90 bp | AATCACAAGAGTCTGTACCCCTTTCTCAGCAACTTCCTTTACATCTaGTGGCTGCACTCCAGGAGAATGCTCGGTTCCTGTTTCTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: NHKSLYPFLSNFLYI*WLHSRRMLGSCFSP Trigger: TGGAGAGAAACAGGAACCGAGCATTCTCCTGGAGTGCAGCCAGCAGATGTAAAGGAAGTTGCTGAGAAAGGGGTACAGACTCTTGTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCGCCATCAGCAGGTGGAATGGAAGACACCTCCTACCCTGACCCCTTGGGCATTTACATCTGCTGGCTaGACTCCAGGAGAATGCTCG | + |
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Preference number: 2 (lower is better) Translates to: RRHQQVEWKTPPTLTPWAFTSAG*TPGECS Trigger: CGAGCATTCTCCTGGAGTGCAGCCAGCAGATGTAAA...TGCCCAAGGGGTCAGGGTAGGAGGTGTCTTCCATTCCACCTGCTGATGGCGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR-3UTR GCA 90 bp | GTCGACGGAGGCACCTTCAAGGCCTCACTCATTCCTCTGCCAATCACAAGAGTCGGAGTGCAAAACCTGTaGCTCAGCCTCCCACCAATC | + |
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Preference number: 2 (lower is better) Translates to: VDGGTFKASLIPLPITRVGVQNL*LSLPPI Trigger: GATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCC...GACTCTTGTGATTGGCAGAGGAATGAGTGAGGCCTTGAAGGTGCCTCCGTCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126085.8 |
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| 3UTR-3UTR CCA 90 bp | TGCACTCCAGGAGAATGCTCGGTTCCTGTTTCTCTCCAGTCCCAAGCCCGACTGCAGTGGAGGCTGATGTaGAGACTGGTAAGACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: CTPGECSVPVSLQSQARLQWRLM*RLVRQP Trigger: TGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTG...CAGTCGGGCTTGGGACTGGAGAGAAACAGGAACCGAGCATTCTCCTGGAGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126085.8 |
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| 3UTR-3UTR GCA 90 bp | GACCCGCACATCAATGCCTTGTTTCTCCAGGTACTCCACAGTCGACGGAGGCACTGCACTCCAGGAGAATaGTCGGTTCCTGTTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: DPHINALFLQVLHSRRRHCTPGE*SVPVSL Trigger: GAGAGAAACAGGAACCGAGCATTCTCCTGGAGTGCA...GTGCCTCCGTCGACTGTGGAGTACCTGGAGAAACAAGGCATTGATGTGCGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR-3UTR GCA 90 bp | CGCCATCAGCAGGTGGAATGGAAGACACCTCCTACCCTGACCCCTTGGGCAACCGTTAAGGTAGAGCCTTaGACTTTCATTTGTCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: RHQQVEWKTPPTLTPWATVKVEP*TFICPQ Trigger: TTGGGGACAAATGAAAGTGCAAGGCTCTACCTTAAC...GGTTGCCCAAGGGGTCAGGGTAGGAGGTGTCTTCCATTCCACCTGCTGATGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACCAGTGGAGGCTGATGTaGAGACTGGTAAGACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GVQNLCLSLPPICPKNMNQWRLM*RLVRQP Trigger: TGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTG...GTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR CAA 90 bp | TACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTTaGTGGTCTGATTTATTCTCCTCTGTAGGCGCCATCAGCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: YTVEADVETGKTAKA*WSDLFSSVGAISRW Trigger: CCACCTGCTGATGGCGCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126085.8 |
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| 3UTR-3UTR CCA 90 bp | GCACTCCAGGAGAATGCTCGGTTCCTGTTTCTCTCCAGTCCCAAGCCCGACTGCACAGCCAAGGCTTTGTaGTCTGATTTATTCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: ALQENARFLFLSSPKPDCTAKAL*SDLFSS Trigger: AGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGT...GCAGTCGGGCTTGGGACTGGAGAGAAACAGGAACCGAGCATTCTCCTGGAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR-3UTR CCA 90 bp | GATTTAAGCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCAGTGGAGGCTGATGTaGAGACTGGTAAGACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: DLSNLECKTCASASHQSVQWRLM*RLVRQP Trigger: TGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTG...GACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGCTTAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGCAAGGCTTTGTGGTCTaGTTTATTCTCCTCTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: KQPGVQNLCLSLPPICPKQGFVV*FILLCR Trigger: CCTACAGAGGAGAATAAATCAGACCACAAAGCCTTG...CTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCTCAGCAACTTCCTTTACATCTGCTGGCTGCACTCCAGGAGAATGCTCGGTAGCCCGACTGCCTCCTaGCCATACTTTGCAATCCTT | + |
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Preference number: 2 (lower is better) Translates to: FLSNFLYICWLHSRRMLGSPTAS*PYFAIL Trigger: AAGGATTGCAAAGTATGGCCAGGAGGCAGTCGGGCT...ACCGAGCATTCTCCTGGAGTGCAGCCAGCAGATGTAAAGGAAGTTGCTGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGGTGGAATGGAAGACACCTCCTACCCTGACCCCTTGGGCAACCAAGGCATCTGTCCCAAGAACATaGACATATGTCCAAAATACA | + |
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Preference number: 2 (lower is better) Translates to: QQVEWKTPPTLTPWATKASVPRT*TYVQNT Trigger: TGTATTTTGGACATATGTTCATGTTCTTGGGACAGA...TGCCTTGGTTGCCCAAGGGGTCAGGGTAGGAGGTGTCTTCCATTCCACCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126085.8 |
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| 3UTR-3UTR TCA 90 bp | ACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTGAACCTCTCTCTTCTCTaGTTTAAGCAACCTGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: TQWRLMWRLVRQPRLCGLNLSLL*FKQPGV Trigger: CACTCCAGGTTGCTTAAATCAGAGAAGAGAGAGGTT...CAGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCCAAAATACACGGAGTGCAAAACCTGTaGCTCAGCCTCCCACCAATC | + |
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Preference number: 2 (lower is better) Translates to: PQPPTNLSQEHEHMSKIHGVQNL*LSLPPI Trigger: GATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCC...GTGTATTTTGGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTTAAGCAACCTGGAGTaGAAAACCTGTGCCTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: AKPVPQPPTNLSQEHEHMLSNLE*KTCASA Trigger: GGCTGAGGCACAGGTTTTGCACTCCAGGTTGCTTAA...CATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR-3UTR CCA 90 bp | GCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAAACAGCCAAGGCTTTGTaGTCTGATTTATTCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: ATWSAKPVPQPPTNLSQETAKAL*SDLFSS Trigger: AGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGT...TTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR-3UTR TCA 90 bp | GCACCTTCAAGGCCTCACTCATTCCTCTGCCAATCACAAGAGTCTGTACCCCTTCAAGGCTTTGTGGTCTaGTTTATTCTCCTCTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: APSRPHSFLCQSQESVPLQGFVV*FILLCR Trigger: CCTACAGAGGAGAATAAATCAGACCACAAAGCCTTG...AAGGGGTACAGACTCTTGTGATTGGCAGAGGAATGAGTGAGGCCTTGAAGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR-3UTR CCA 90 bp | TTAAGCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAACAGCCAAGGCTTTGTaGTCTGATTTATTCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LSNLECKTCASASHQSVPTAKAL*SDLFSS Trigger: AGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGT...TGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCCAAAATACACCAGTGGAGGCTGATGTaGAGACTGGTAAGACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PQPPTNLSQEHEHMSKIHQWRLM*RLVRQP Trigger: TGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTG...GTGTATTTTGGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR-3UTR TCA 90 bp | GTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATACAAGGCTTTGTGGTCTaGTTTATTCTCCTCTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: VQNLCLSLPPICPKNMNIQGFVV*FILLCR Trigger: CCTACAGAGGAGAATAAATCAGACCACAAAGCCTTG...TATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR-3UTR GCA 90 bp | GCACCTTCAAGGCCTCACTCATTCCTCTGCCAATCACAAGAGTCTGTACCCCTTCTCCTGGCCATACTTTaGAATCCTTATAGGTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: APSRPHSFLCQSQESVPLLLAIL*NPYRLR Trigger: CCTTAACCTATAAGGATTGCAAAGTATGGCCAGGAG...AAGGGGTACAGACTCTTGTGATTGGCAGAGGAATGAGTGAGGCCTTGAAGGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR-3UTR CCA 90 bp | TACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTACAGCCAAGGCTTTGTaGTCTGATTTATTCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: YTVEADVETGKTAKALWSTAKAL*SDLFSS Trigger: AGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGT...AGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR-3UTR TCA 90 bp | CCAATCACAAGAGTCTGTACCCCTTTCTCAGCAACTTCCTTTACATCTGCTGGCAACCTCTCTCTTCTCTaGTTTAAGCAACCTGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: PITRVCTPFSATSFTSAGNLSLL*FKQPGV Trigger: CACTCCAGGTTGCTTAAATCAGAGAAGAGAGAGGTT...GCCAGCAGATGTAAAGGAAGTTGCTGAGAAAGGGGTACAGACTCTTGTGATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126085.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATAACAGCCAAGGCTTTGTaGTCTGATTTATTCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: VQNLCLSLPPICPKNMNITAKAL*SDLFSS Trigger: AGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGT...TATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCTGTCCCAAGAACATaGACATATGTCCAAAATACA | + |
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Preference number: 2 (lower is better) Translates to: AKPVPQPPTNLSQEHEHMSVPRT*TYVQNT Trigger: TGTATTTTGGACATATGTTCATGTTCTTGGGACAGA...CATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAACATGAACATATGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTCAAGGCTTTGTGGTCTaGTTTATTCTCCTCTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: KNMNICPKYTVEADVETGQGFVV*FILLCR Trigger: CCTACAGAGGAGAATAAATCAGACCACAAAGCCTTG...ACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACATATGTTCATGTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR-3UTR TCA 90 bp | CCAATCTGTCCCAAGAACATGAACATATGTCCAAAATACACAGTGGAGGCTGATCAAGGCTTTGTGGTCTaGTTTATTCTCCTCTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: PICPKNMNICPKYTVEADQGFVV*FILLCR Trigger: CCTACAGAGGAGAATAAATCAGACCACAAAGCCTTG...ATCAGCCTCCACTGTGTATTTTGGACATATGTTCATGTTCTTGGGACAGATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR-3UTR TCA 90 bp | ATATGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGTCTGTCCCAAGAACATaGACATATGTCCAAAATACA | + |
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Preference number: 2 (lower is better) Translates to: ICPKYTVEADVETGKTAKSVPRT*TYVQNT Trigger: TGTATTTTGGACATATGTTCATGTTCTTGGGACAGA...CTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR GCA 72 bp | TCACGGCCTGCTCTGTCTGGAGGACCCGCACATCAATaGCTTGTTTCTCCAGGTACTCCACAGTCGACGGAG | + |
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Preference number: 3 (lower is better) Translates to: SRPALSGGPAHQ*LVSPGTPQSTE Trigger: CTCCGTCGACTGTGGAGTACCTGGAGAAACAAGGCATTGATGTGCGGGTCCTCCAGACAGAGCAGGCCGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR-3UTR CAA 90 bp | CCTCCTACCCTGACCCCTTGGGCAACCAAGGCATTATACTCCTTCACGGCCTGCGCCTTGCACTTTCATTaGTCCCCAAGAGAGGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: PPTLTPWATKALYSFTACALHFH*SPREGS Trigger: GCTTCCCTCTCTTGGGGACAAATGAAAGTGCAAGGC...GCAGGCCGTGAAGGAGTATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR CCA 72 bp | CAGGTGGAATGGAAGACACCTCCTACCCTGACCCCTTaGGCAACCAAGGCATTATACTCCTTCACGGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: QVEWKTPPTLTP*ATKALYSFTAC Trigger: GCAGGCCGTGAAGGAGTATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGGAGGTGTCTTCCATTCCACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
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| 3UTR-3UTR CAA 90 bp | ACCCTGACCCCTTGGGCAACCAAGGCATTATACTCCTTCACGGCCTGCTCTGTCGCCTTGCACTTTCATTaGTCCCCAAGAGAGGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TLTPWATKALYSFTACSVALHFH*SPREGS Trigger: GCTTCCCTCTCTTGGGGACAAATGAAAGTGCAAGGC...GACAGAGCAGGCCGTGAAGGAGTATAATGCCTTGGTTGCCCAAGGGGTCAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
||
| 3UTR GCA 72 bp | CCTTGGGCAACCAAGGCATTATACTCCTTCACGGCCTaGTCTGTCTGGAGGACCCGCACATCAATGCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PWATKALYSFTA*SVWRTRTSMPC Trigger: ACAAGGCATTGATGTGCGGGTCCTCCAGACAGAGCAGGCCGTGAAGGAGTATAATGCCTTGGTTGCCCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
||
| 3UTR CCA 72 bp | TTTATTCTCCTCTGTAGGCGCCATCAGCAGGTGGAATaGAAGACACCTCCTACCCTGACCCCTTGGGCAACC | + |
|
Preference number: 3 (lower is better) Translates to: FILLCRRHQQVE*KTPPTLTPWAT Trigger: GGTTGCCCAAGGGGTCAGGGTAGGAGGTGTCTTCCATTCCACCTGCTGATGGCGCCTACAGAGGAGAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
||
| 3UTR TCA 72 bp | GCCATCAGCAGGTGGAATGGAAGACACCTCCTACCCTaGCCCCTTGGGCAACCAAGGCATTATACTCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: AISRWNGRHLLP*PLGQPRHYTPS Trigger: TGAAGGAGTATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGGAGGTGTCTTCCATTCCACCTGCTGATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
||
| 3UTR CCA 72 bp | ACCAAGGCATTATACTCCTTCACGGCCTGCTCTGTCTaGAGGACCCGCACATCAATGCCTTGTTTCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TKALYSFTACSV*RTRTSMPCFSR Trigger: CCTGGAGAAACAAGGCATTGATGTGCGGGTCCTCCAGACAGAGCAGGCCGTGAAGGAGTATAATGCCTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGTAGGCGCCATCAGCAGGTGGAATGGAAGACACCTCCTACCCTGACCCCTAAGACAGCCAAGGCTTaGTGGTCTGATTTATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LCRRHQQVEWKTPPTLTPKTAKA*WSDLFS Trigger: GGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTT...AGGGGTCAGGGTAGGAGGTGTCTTCCATTCCACCTGCTGATGGCGCCTACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
||
| 3UTR GCA 72 bp | AGTCTGTACCCCTTTCTCAGCAACTTCCTTTACATCTaGTGGCTGCACTCCAGGAGAATGCTCGGTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SLYPFLSNFLYI*WLHSRRMLGSC Trigger: ACAGGAACCGAGCATTCTCCTGGAGTGCAGCCAGCAGATGTAAAGGAAGTTGCTGAGAAAGGGGTACAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
||
| 3UTR CCA 72 bp | CTGTACCCCTTTCTCAGCAACTTCCTTTACATCTGCTaGCTGCACTCCAGGAGAATGCTCGGTTCCTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LYPFLSNFLYIC*LHSRRMLGSCF Trigger: GAAACAGGAACCGAGCATTCTCCTGGAGTGCAGCCAGCAGATGTAAAGGAAGTTGCTGAGAAAGGGGTACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
||
| 3UTR CCA 72 bp | GCTGATGTGGAGACTGGTAAGACAGCCAAGGCTTTGTaGTCTGATTTATTCTCCTCTGTAGGCGCCATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ADVETGKTAKAL*SDLFSSVGAIS Trigger: GCTGATGGCGCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCACATCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126085.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACAAGACAGCCAAGGCTTaGTGGTCTGATTTATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GVQNLCLSLPPICPKNMNKTAKA*WSDLFS Trigger: GGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTT...GTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| 3UTR-3UTR CAA 90 bp | GATTTAAGCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCAAGACAGCCAAGGCTTaGTGGTCTGATTTATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: DLSNLECKTCASASHQSVKTAKA*WSDLFS Trigger: GGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTT...GACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGCTTAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| 3UTR TCA 72 bp | TGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATaGACATATGTCCAAAATACACAGTGGAGGCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: CASASHQSVPRT*TYVQNTQWRLM Trigger: CATCAGCCTCCACTGTGTATTTTGGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCCAAAAAGACAGCCAAGGCTTaGTGGTCTGATTTATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PVPQPPTNLSQEHEHMSKKTAKA*WSDLFS Trigger: GGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTT...TTTGGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000126085.8 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCTTCAAGGCCTCACTCATTCCTCTGCCAATCACAAGAGTCTGTACCCCTTTCAAGACAGCCAAGGCTTaGTGGTCTGATTTATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TFKASLIPLPITRVCTPFKTAKA*WSDLFS Trigger: GGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTT...GAAAGGGGTACAGACTCTTGTGATTGGCAGAGGAATGAGTGAGGCCTTGAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
||
| CDS-3UTR CCA 90 bp | AGGACCCGCACATCAATGCCTTGTTTCTCCAGGTACTCCACAGTCGACGGAGGCTGTGATCCCAGCACTTaGGAGGTGAGGAGGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTRTSMPCFSRYSTVDGGCDPST*EVRRRV Trigger: GACCCTCCTCCTCACCTCCCAAGTGCTGGGATCACA...GCCTCCGTCGACTGTGGAGTACCTGGAGAAACAAGGCATTGATGTGCGGGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCATACTCCTTCACGGCCTaGTCTGTCTGGAGGACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSNLECKTCASASHQSVPYSFTA*SVWRTR Trigger: GCGGGTCCTCCAGACAGAGCAGGCCGTGAAGGAGTA...TGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTGTACTCCTTCACGGCCTaGTCTGTCTGGAGGACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TQWRLMWRLVRQPRLCGLYSFTA*SVWRTR Trigger: GCGGGTCCTCCAGACAGAGCAGGCCGTGAAGGAGTA...CAGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAATACTCCTTCACGGCCTaGTCTGTCTGGAGGACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: WSAKPVPQPPTNLSQEHEYSFTA*SVWRTR Trigger: GCGGGTCCTCCAGACAGAGCAGGCCGTGAAGGAGTA...TTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR CCA 90 bp | CGGAGGCACCTTCAAGGCCTCACTCATTCCTCTGCCAATCACAAGAGTCTGTACTGTGATCCCAGCACTTaGGAGGTGAGGAGGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRHLQGLTHSSANHKSLYCDPST*EVRRRV Trigger: GACCCTCCTCCTCACCTCCCAAGTGCTGGGATCACA...GTACAGACTCTTGTGATTGGCAGAGGAATGAGTGAGGCCTTGAAGGTGCCTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126085.8 ENSMUST00000154779.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTGACGGCCTGCTCTGTCTaGAGGACCCGCACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: TQWRLMWRLVRQPRLCGLTACSV*RTRTSM Trigger: CATTGATGTGCGGGTCCTCCAGACAGAGCAGGCCGT...CAGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR GCA 90 bp | TACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTAGTCCCAAGCCCGACTaGCTCCTGGCCATACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YTVEADVETGKTAKALWSSPKPD*LLAILC Trigger: GCAAAGTATGGCCAGGAGGCAGTCGGGCTTGGGACT...AGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATTACTCCTTCACGGCCTaGTCTGTCTGGAGGACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SAKPVPQPPTNLSQEHEHYSFTA*SVWRTR Trigger: GCGGGTCCTCCAGACAGAGCAGGCCGTGAAGGAGTA...ATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCGCCTACTCCTTCACGGCCTaGTCTGTCTGGAGGACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TGKTAKALWSDLFSSVGAYSFTA*SVWRTR Trigger: GCGGGTCCTCCAGACAGAGCAGGCCGTGAAGGAGTA...GGCGCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000138060.3 ENSMUST00000144858.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR CCA 90 bp | GCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAAAGCCCGACTGCCTCCTaGCCATACTTTGCAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ATWSAKPVPQPPTNLSQESPTAS*PYFAIL Trigger: AAGGATTGCAAAGTATGGCCAGGAGGCAGTCGGGCT...TTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR CCA 90 bp | TACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTACGGCCTGCTCTGTCTaGAGGACCCGCACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: YTVEADVETGKTAKALWSTACSV*RTRTSM Trigger: CATTGATGTGCGGGTCCTCCAGACAGAGCAGGCCGT...AGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR CCA 90 bp | TGCACTCCAGGAGAATGCTCGGTTCCTGTTTCTCTCCAGTCCCAAGCCCGACTGCCACAGCACGGTATATaGGGCAAGGAAGTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CTPGECSVPVSLQSQARLPQHGI*GKEVLS Trigger: GGAAAGAACTTCCTTGCCCCATATACCGTGCTGTGG...CAGTCGGGCTTGGGACTGGAGAGAAACAGGAACCGAGCATTCTCCTGGAGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126085.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCGCCAGTCCCAAGCCCGACTaGCTCCTGGCCATACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGKTAKALWSDLFSSVGASPKPD*LLAILC Trigger: GCAAAGTATGGCCAGGAGGCAGTCGGGCTTGGGACT...GGCGCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000138060.3 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR GCA 90 bp | GCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAAGGACCCGCACATCAATaGCTTGTTTCTCCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ATWSAKPVPQPPTNLSQEGPAHQ*LVSPGT Trigger: AGTACCTGGAGAAACAAGGCATTGATGTGCGGGTCC...TTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR GCA 90 bp | GAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCTACTCCTTCACGGCCTaGTCTGTCTGGAGGACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ETGKTAKALWSDLFSSVGYSFTA*SVWRTR Trigger: GCGGGTCCTCCAGACAGAGCAGGCCGTGAAGGAGTA...GCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000138060.3 ENSMUST00000144858.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCGCCTGTGATCCCAGCACTTaGGAGGTGAGGAGGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGKTAKALWSDLFSSVGACDPST*EVRRRV Trigger: GACCCTCCTCCTCACCTCCCAAGTGCTGGGATCACA...GGCGCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000126085.8 ENSMUST00000144858.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATTGTGATCCCAGCACTTaGGAGGTGAGGAGGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SAKPVPQPPTNLSQEHEHCDPST*EVRRRV Trigger: GACCCTCCTCCTCACCTCCCAAGTGCTGGGATCACA...ATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000126085.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTGAGCCCGACTGCCTCCTaGCCATACTTTGCAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQWRLMWRLVRQPRLCGLSPTAS*PYFAIL Trigger: AAGGATTGCAAAGTATGGCCAGGAGGCAGTCGGGCT...CAGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTACGGCCTGCTCTGTCTaGAGGACCCGCACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: CPKYTVEADVETGKTAKATACSV*RTRTSM Trigger: CATTGATGTGCGGGTCCTCCAGACAGAGCAGGCCGT...AGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCGCCACGGCCTGCTCTGTCTaGAGGACCCGCACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: TGKTAKALWSDLFSSVGATACSV*RTRTSM Trigger: CATTGATGTGCGGGTCCTCCAGACAGAGCAGGCCGT...GGCGCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000138060.3 ENSMUST00000144858.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATAACGGCCTGCTCTGTCTaGAGGACCCGCACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: VQNLCLSLPPICPKNMNITACSV*RTRTSM Trigger: CATTGATGTGCGGGTCCTCCAGACAGAGCAGGCCGT...TATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTGCCTACCCTGACCCCTTaGGCAACCAAGGCATTATAC | + |
|
Preference number: 4 (lower is better) Translates to: TQWRLMWRLVRQPRLCGLPTLTP*ATKALY Trigger: GTATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGG...CAGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCACCTACCCTGACCCCTTaGGCAACCAAGGCATTATAC | + |
|
Preference number: 4 (lower is better) Translates to: LSNLECKTCASASHQSVPPTLTP*ATKALY Trigger: GTATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGG...TGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACGGACCCGCACATCAATaGCTTGTTTCTCCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GVQNLCLSLPPICPKNMNGPAHQ*LVSPGT Trigger: AGTACCTGGAGAAACAAGGCATTGATGTGCGGGTCC...GTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR GCA 90 bp | AACATATGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCTACTCCTTCACGGCCTaGTCTGTCTGGAGGACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NICPKYTVEADVETGKTAYSFTA*SVWRTR Trigger: GCGGGTCCTCCAGACAGAGCAGGCCGTGAAGGAGTA...GGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACATATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | TTAAGCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCATTTACATCTGCTGGCTaGACTCCAGGAGAATGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSNLECKTCASASHQSVPFTSAG*TPGECS Trigger: CGAGCATTCTCCTGGAGTGCAGCCAGCAGATGTAAA...TGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGCTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | AACATATGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAGTCCCAAGCCCGACTaGCTCCTGGCCATACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NICPKYTVEADVETGKTASPKPD*LLAILC Trigger: GCAAAGTATGGCCAGGAGGCAGTCGGGCTTGGGACT...GGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACATATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | ATATGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGAGTCCCAAGCCCGACTaGCTCCTGGCCATACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ICPKYTVEADVETGKTAKSPKPD*LLAILC Trigger: GCAAAGTATGGCCAGGAGGCAGTCGGGCTTGGGACT...CTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | GATTTAAGCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCTGCACTCCAGGAGAATaGTCGGTTCCTGTTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DLSNLECKTCASASHQSVCTPGE*SVPVSL Trigger: GAGAGAAACAGGAACCGAGCATTCTCCTGGAGTGCA...GACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGCTTAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | TTTAAGCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAACTTCCTTTACATCTaGTGGCTGCACTCCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FKQPGVQNLCLSLPPICPNFLYI*WLHSRR Trigger: TCTCCTGGAGTGCAGCCAGCAGATGTAAAGGAAGTT...GGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGCTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | GCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACCTCACTCATTCCTCTaGCAATCACAAGAGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ATWSAKPVPQPPTNLSQEPHSFL*QSQESV Trigger: TACAGACTCTTGTGATTGGCAGAGGAATGAGTGAGG...TTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CCA 90 bp | ATATGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGTGTGATCCCAGCACTTaGGAGGTGAGGAGGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ICPKYTVEADVETGKTAKCDPST*EVRRRV Trigger: GACCCTCCTCCTCACCTCCCAAGTGCTGGGATCACA...CTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000126085.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CCA 90 bp | AAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCCAGCCCGACTGCCTCCTaGCCATACTTTGCAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KPVPQPPTNLSQEHEHMSSPTAS*PYFAIL Trigger: AAGGATTGCAAAGTATGGCCAGGAGGCAGTCGGGCT...GGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CCA 90 bp | ACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCGCCAGCCCGACTGCCTCCTaGCCATACTTTGCAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGKTAKALWSDLFSSVGASPTAS*PYFAIL Trigger: AAGGATTGCAAAGTATGGCCAGGAGGCAGTCGGGCT...GGCGCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000138060.3 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CCA 90 bp | AGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATCCTACCCTGACCCCTTaGGCAACCAAGGCATTATAC | + |
|
Preference number: 4 (lower is better) Translates to: SAKPVPQPPTNLSQEHEHPTLTP*ATKALY Trigger: GTATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGG...ATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CCA 90 bp | GAGGACCCGCACATCAATGCCTTGTTTCTCCAGGTACTCCACAGTCGACGGAGGAGTTCTTTCCAGAGCTaGCTGGTGATCTTTAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: EDPHINALFLQVLHSRRRSSFQS*LVIFKL Trigger: CAGTTTAAAGATCACCAGCCAGCTCTGGAAAGAACT...CCTCCGTCGACTGTGGAGTACCTGGAGAAACAAGGCATTGATGTGCGGGTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126085.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCATTCCTTTACATCTGCTaGCTGCACTCCAGGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LSNLECKTCASASHQSVPFLYIC*LHSRRM Trigger: CATTCTCCTGGAGTGCAGCCAGCAGATGTAAAGGAA...TGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| 3UTR CAA 72 bp | GAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTTaGTGGTCTGATTTATTCTCCTCTGTAGGCGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EADVETGKTAKA*WSDLFSSVGAI Trigger: GATGGCGCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126085.8 |
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| CDS-3UTR GCA 90 bp | AAGCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGGTTAAGGTAGAGCCTTaGACTTTCATTTGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KQPGVQNLCLSLPPICPKVKVEP*TFICPQ Trigger: TTGGGGACAAATGAAAGTGCAAGGCTCTACCTTAAC...CTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | CAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCCAAAATACACAGTAGTCCCAAGCCCGACTaGCTCCTGGCCATACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPPTNLSQEHEHMSKIHSSPKPD*LLAILC Trigger: GCAAAGTATGGCCAGGAGGCAGTCGGGCTTGGGACT...ACTGTGTATTTTGGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR GCA 90 bp | AATACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTTTGTGGTGGACCCGCACATCAATaGCTTGTTTCTCCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: NTQWRLMWRLVRQPRLCGGPAHQ*LVSPGT Trigger: AGTACCTGGAGAAACAAGGCATTGATGTGCGGGTCC...ACCACAAAGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | TGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTGGACCCGCACATCAATaGCTTGTTTCTCCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: CPKYTVEADVETGKTAKAGPAHQ*LVSPGT Trigger: AGTACCTGGAGAAACAAGGCATTGATGTGCGGGTCC...AGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | ACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCGCCGGACCCGCACATCAATaGCTTGTTTCTCCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TGKTAKALWSDLFSSVGAGPAHQ*LVSPGT Trigger: AGTACCTGGAGAAACAAGGCATTGATGTGCGGGTCC...GGCGCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000138060.3 ENSMUST00000144858.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | ACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCGCCTTTACATCTGCTGGCTaGACTCCAGGAGAATGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TGKTAKALWSDLFSSVGAFTSAG*TPGECS Trigger: CGAGCATTCTCCTGGAGTGCAGCCAGCAGATGTAAA...GGCGCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | CCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCCAAATTTACATCTGCTGGCTaGACTCCAGGAGAATGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PVPQPPTNLSQEHEHMSKFTSAG*TPGECS Trigger: CGAGCATTCTCCTGGAGTGCAGCCAGCAGATGTAAA...TTTGGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | TGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAAAACTTCCTTTACATCTaGTGGCTGCACTCCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WSAKPVPQPPTNLSQEHENFLYI*WLHSRR Trigger: TCTCCTGGAGTGCAGCCAGCAGATGTAAAGGAAGTT...TTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CCA 90 bp | CAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCCAAAATACACAGTACGGCCTGCTCTGTCTaGAGGACCCGCACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QPPTNLSQEHEHMSKIHSTACSV*RTRTSM Trigger: CATTGATGTGCGGGTCCTCCAGACAGAGCAGGCCGT...ACTGTGTATTTTGGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CCA 90 bp | GAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCCCTACCCTGACCCCTTaGGCAACCAAGGCATTATAC | + |
|
Preference number: 4 (lower is better) Translates to: ETGKTAKALWSDLFSSVGPTLTP*ATKALY Trigger: GTATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGG...GCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000138060.3 ENSMUST00000144858.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | GGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACCTCCTGGCCATACTTTaGAATCCTTATAGGTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVQNLCLSLPPICPKNMNLLAIL*NPYRLR Trigger: CCTTAACCTATAAGGATTGCAAAGTATGGCCAGGAG...GTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | GAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCGGACCCGCACATCAATaGCTTGTTTCTCCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ETGKTAKALWSDLFSSVGGPAHQ*LVSPGT Trigger: AGTACCTGGAGAAACAAGGCATTGATGTGCGGGTCC...GCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000138060.3 ENSMUST00000144858.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | GCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGAACTTCCTTTACATCTaGTGGCTGCACTCCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AKPVPQPPTNLSQEHEHMNFLYI*WLHSRR Trigger: TCTCCTGGAGTGCAGCCAGCAGATGTAAAGGAAGTT...CATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CCA 90 bp | AACATATGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAGCCCGACTGCCTCCTaGCCATACTTTGCAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NICPKYTVEADVETGKTASPTAS*PYFAIL Trigger: AAGGATTGCAAAGTATGGCCAGGAGGCAGTCGGGCT...GGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACATATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CCA 90 bp | CCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCCAAAATACACCCTACCCTGACCCCTTaGGCAACCAAGGCATTATAC | + |
|
Preference number: 4 (lower is better) Translates to: PQPPTNLSQEHEHMSKIHPTLTP*ATKALY Trigger: GTATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGG...GTGTATTTTGGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CCA 90 bp | AATACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTTTGTGGTTTCCTTTACATCTGCTaGCTGCACTCCAGGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: NTQWRLMWRLVRQPRLCGFLYIC*LHSRRM Trigger: CATTCTCCTGGAGTGCAGCCAGCAGATGTAAAGGAA...ACCACAAAGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | ATATGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGGACCCGCACATCAATaGCTTGTTTCTCCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ICPKYTVEADVETGKTAKGPAHQ*LVSPGT Trigger: AGTACCTGGAGAAACAAGGCATTGATGTGCGGGTCC...CTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | GTGGAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTATGCACTCCAGGAGAATaGTCGGTTCCTGTTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VETGKTAKALWSDLFSSVCTPGE*SVPVSL Trigger: GAGAGAAACAGGAACCGAGCATTCTCCTGGAGTGCA...TACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | CCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCCAAACCTCACTCATTCCTCTaGCAATCACAAGAGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PVPQPPTNLSQEHEHMSKPHSFL*QSQESV Trigger: TACAGACTCTTGTGATTGGCAGAGGAATGAGTGAGG...TTTGGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | AAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCCGTTAAGGTAGAGCCTTaGACTTTCATTTGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KPVPQPPTNLSQEHEHMSVKVEP*TFICPQ Trigger: TTGGGGACAAATGAAAGTGCAAGGCTCTACCTTAAC...GGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCGCCCTCCTGGCCATACTTTaGAATCCTTATAGGTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGKTAKALWSDLFSSVGALLAIL*NPYRLR Trigger: CCTTAACCTATAAGGATTGCAAAGTATGGCCAGGAG...GGCGCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000138060.3 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTCTCCTGGCCATACTTTaGAATCCTTATAGGTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPKYTVEADVETGKTAKALLAIL*NPYRLR Trigger: CCTTAACCTATAAGGATTGCAAAGTATGGCCAGGAG...AGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CCA 90 bp | AAGAACATGAACATATGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTAGCCCGACTGCCTCCTaGCCATACTTTGCAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KNMNICPKYTVEADVETGSPTAS*PYFAIL Trigger: AAGGATTGCAAAGTATGGCCAGGAGGCAGTCGGGCT...ACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACATATGTTCATGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR CCA 90 bp | AAGAACATGAACATATGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTCCTACCCTGACCCCTTaGGCAACCAAGGCATTATAC | + |
|
Preference number: 4 (lower is better) Translates to: KNMNICPKYTVEADVETGPTLTP*ATKALY Trigger: GTATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGG...ACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACATATGTTCATGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCCAAAATACACTTCCTTTACATCTGCTaGCTGCACTCCAGGAGAATG | + |
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Preference number: 4 (lower is better) Translates to: PQPPTNLSQEHEHMSKIHFLYIC*LHSRRM Trigger: CATTCTCCTGGAGTGCAGCCAGCAGATGTAAAGGAA...GTGTATTTTGGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR TCA 90 bp | ATCTGTCCCAAGAACATGAACATATGTCCAAAATACACAGTGGAGGCTGATGTGTCCAGAGCTGGCTGGTaGTCTTTAAACTGTGATCCC | + |
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Preference number: 4 (lower is better) Translates to: ICPKNMNICPKYTVEADVSRAGW*SLNCDP Trigger: GGGATCACAGTTTAAAGATCACCAGCCAGCTCTGGA...CACATCAGCCTCCACTGTGTATTTTGGACATATGTTCATGTTCTTGGGACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126085.8 |
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| CDS-3UTR GCA 90 bp | GAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCGTTAAGGTAGAGCCTTaGACTTTCATTTGTCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: ETGKTAKALWSDLFSSVGVKVEP*TFICPQ Trigger: TTGGGGACAAATGAAAGTGCAAGGCTCTACCTTAAC...GCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000138060.3 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | ATGAACATATGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTAAGACATGCACTCCAGGAGAATaGTCGGTTCCTGTTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: MNICPKYTVEADVETGKTCTPGE*SVPVSL Trigger: GAGAGAAACAGGAACCGAGCATTCTCCTGGAGTGCA...TGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACATATGTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | GTGGAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTACTCCTGGCCATACTTTaGAATCCTTATAGGTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: VETGKTAKALWSDLFSSVLLAIL*NPYRLR Trigger: CCTTAACCTATAAGGATTGCAAAGTATGGCCAGGAG...TACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | CAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCCAAAATACACAGTGTTAAGGTAGAGCCTTaGACTTTCATTTGTCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: QPPTNLSQEHEHMSKIHSVKVEP*TFICPQ Trigger: TTGGGGACAAATGAAAGTGCAAGGCTCTACCTTAAC...ACTGTGTATTTTGGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | ATCTGTCCCAAGAACATGAACATATGTCCAAAATACACAGTGGAGGCTGATGTGCCTCACTCATTCCTCTaGCAATCACAAGAGTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: ICPKNMNICPKYTVEADVPHSFL*QSQESV Trigger: TACAGACTCTTGTGATTGGCAGAGGAATGAGTGAGG...CACATCAGCCTCCACTGTGTATTTTGGACATATGTTCATGTTCTTGGGACAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | CCAATCTGTCCCAAGAACATGAACATATGTCCAAAATACACAGTGGAGGCTGATGTTAAGGTAGAGCCTTaGACTTTCATTTGTCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: PICPKNMNICPKYTVEADVKVEP*TFICPQ Trigger: TTGGGGACAAATGAAAGTGCAAGGCTCTACCTTAAC...ATCAGCCTCCACTGTGTATTTTGGACATATGTTCATGTTCTTGGGACAGATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR GCA 90 bp | ATGAACATATGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTAAGACACTCCTGGCCATACTTTaGAATCCTTATAGGTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: MNICPKYTVEADVETGKTLLAIL*NPYRLR Trigger: CCTTAACCTATAAGGATTGCAAAGTATGGCCAGGAG...TGTCTTACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACATATGTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | AGCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAGCCTTGCACTTTCATTaGTCCCCAAGAGAGGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: SNLECKTCASASHQSVPRALHFH*SPREGS Trigger: GCTTCCCTCTCTTGGGGACAAATGAAAGTGCAAGGC...TCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | GCAACCTGGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAATCCTACCCTGACCCCTaGGGCAACCAAGGCATTATA | + |
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Preference number: 5 (lower is better) Translates to: ATWSAKPVPQPPTNLSQESYPDP*GNQGII Trigger: TATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGGA...TTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | GGAGTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACTCCTACCCTGACCCCTaGGGCAACCAAGGCATTATA | + |
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Preference number: 5 (lower is better) Translates to: GVQNLCLSLPPICPKNMNSYPDP*GNQGII Trigger: TATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGGA...GTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | ACACAGTGGAGGCTGATGTGGAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTGTCCTACCCTGACCCCTaGGGCAACCAAGGCATTATA | + |
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Preference number: 5 (lower is better) Translates to: TQWRLMWRLVRQPRLCGLSYPDP*GNQGII Trigger: TATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGGA...CAGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCACATCAGCCTCCACTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | ACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCGCCCCGCACATCAATGCCTaGTTTCTCCAGGTACTCCAC | + |
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Preference number: 5 (lower is better) Translates to: TGKTAKALWSDLFSSVGAPHINA*FLQVLH Trigger: GTGGAGTACCTGGAGAAACAAGGCATTGATGTGCGG...GGCGCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000138060.3 ENSMUST00000144858.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | AAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCCCCGCACATCAATGCCTaGTTTCTCCAGGTACTCCAC | + |
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Preference number: 5 (lower is better) Translates to: KPVPQPPTNLSQEHEHMSPHINA*FLQVLH Trigger: GTGGAGTACCTGGAGAAACAAGGCATTGATGTGCGG...GGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | ACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCGCCTCCTACCCTGACCCCTaGGGCAACCAAGGCATTATA | + |
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Preference number: 5 (lower is better) Translates to: TGKTAKALWSDLFSSVGASYPDP*GNQGII Trigger: TATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGGA...GGCGCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000138060.3 ENSMUST00000144858.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | GTGCAAAACCTGTGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATCCTACCCTGACCCCTaGGGCAACCAAGGCATTATA | + |
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Preference number: 5 (lower is better) Translates to: VQNLCLSLPPICPKNMNISYPDP*GNQGII Trigger: TATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGGA...TATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | GAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCGCCTTGCACTTTCATTaGTCCCCAAGAGAGGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: ETGKTAKALWSDLFSSVGALHFH*SPREGS Trigger: GCTTCCCTCTCTTGGGGACAAATGAAAGTGCAAGGC...GCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000138060.3 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | GAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGGCCCGCACATCAATGCCTaGTTTCTCCAGGTACTCCAC | + |
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Preference number: 5 (lower is better) Translates to: ETGKTAKALWSDLFSSVGPHINA*FLQVLH Trigger: GTGGAGTACCTGGAGAAACAAGGCATTGATGTGCGG...GCCTACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000138060.3 ENSMUST00000144858.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | ACCTTCAAGGCCTCACTCATTCCTCTGCCAATCACAAGAGTCTGTACCCCTTTCCCCAGGTCCCCTTTCTaGCTTCCTTTAGCTCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: TFKASLIPLPITRVCTPFPRSPF*LPLALL Trigger: TAGAAGAGCTAAAGGAAGCAAGAAAGGGGACCTGGG...GAAAGGGGTACAGACTCTTGTGATTGGCAGAGGAATGAGTGAGGCCTTGAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126085.8 |
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| CDS-3UTR CAA 90 bp | CCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCCAAAATACACGCCTTGCACTTTCATTaGTCCCCAAGAGAGGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: PQPPTNLSQEHEHMSKIHALHFH*SPREGS Trigger: GCTTCCCTCTCTTGGGGACAAATGAAAGTGCAAGGC...GTGTATTTTGGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | GTGGAGACTGGTAAGACAGCCAAGGCTTTGTGGTCTGATTTATTCTCCTCTGTAGCCTTGCACTTTCATTaGTCCCCAAGAGAGGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: VETGKTAKALWSDLFSSVALHFH*SPREGS Trigger: GCTTCCCTCTCTTGGGGACAAATGAAAGTGCAAGGC...TACAGAGGAGAATAAATCAGACCACAAAGCCTTGGCTGTCTTACCAGTCTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | TGCCTCAGCCTCCCACCAATCTGTCCCAAGAACATGAACATATGTCCAAAATACCCGCACATCAATGCCTaGTTTCTCCAGGTACTCCAC | + |
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Preference number: 5 (lower is better) Translates to: CLSLPPICPKNMNICPKYPHINA*FLQVLH Trigger: GTGGAGTACCTGGAGAAACAAGGCATTGATGTGCGG...GTATTTTGGACATATGTTCATGTTCTTGGGACAGATTGGTGGGAGGCTGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | AAGAACATGAACATATGTCCAAAATACACAGTGGAGGCTGATGTGGAGACTGGTGCCTTGCACTTTCATTaGTCCCCAAGAGAGGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: KNMNICPKYTVEADVETGALHFH*SPREGS Trigger: GCTTCCCTCTCTTGGGGACAAATGAAAGTGCAAGGC...ACCAGTCTCCACATCAGCCTCCACTGTGTATTTTGGACATATGTTCATGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | ATCTGTCCCAAGAACATGAACATATGTCCAAAATACACAGTGGAGGCTGATGTGTCCTACCCTGACCCCTaGGGCAACCAAGGCATTATA | + |
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Preference number: 5 (lower is better) Translates to: ICPKNMNICPKYTVEADVSYPDP*GNQGII Trigger: TATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGGA...CACATCAGCCTCCACTGTGTATTTTGGACATATGTTCATGTTCTTGGGACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS-3UTR CAA 90 bp | TTGAACCTAACACATAGCACAATATTAAATGTCAGCAAACCTCTCTCTTCTCTGTCCTACCCTGACCCCTaGGGCAACCAAGGCATTATA | + |
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Preference number: 5 (lower is better) Translates to: LNLTHSTILNVSKPLSSLSYPDP*GNQGII Trigger: TATAATGCCTTGGTTGCCCAAGGGGTCAGGGTAGGA...CAGAGAAGAGAGAGGTTTGCTGACATTTAATATTGTGCTATGTGTTAGGTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042627.16 ENSMUST00000072725.12 ENSMUST00000124552.3 ENSMUST00000136757.8 ENSMUST00000154853.8 ENSMUST00000178078.8 |
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| CDS TCA 72 bp | AGTTCTTTCCAGAGCTGGCTGGTGATCTTTAAACTGTaGTCCCAGCACTTGGGAGGTGAGGAGGAGGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: SSFQSWLVIFKL*SQHLGGEEEGR Trigger: CCGACCCTCCTCCTCACCTCCCAAGTGCTGGGATCACAGTTTAAAGATCACCAGCCAGCTCTGGAAAGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126085.8 |
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| CDS GCA 72 bp | TTCTTGCTTCCTTTAGCTCTTCTACAATATGATGACTaGCACCACAGCACGGTATATGGGGCAAGGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: FLLPLALLQYDD*HHSTVYGARKF Trigger: GAACTTCCTTGCCCCATATACCGTGCTGTGGTGGCAGTCATCATATTGTAGAAGAGCTAAAGGAAGCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126085.8 |
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