Pregenerated sensors for AAGAB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037257Ensembl transcript IDs: ENSMUST00000041551.9, ENSMUST00000213880.2
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGCACAGCTGCCAGTGTCAGCAGTGTGCTCAGAACCAACACTGCTaGTCCCTGGGTCCTCAGGAGGGCACTCAGGGCCCTTGCCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: EHSCQCQQCAQNQHC*SLGPQEGTQGPCPA Trigger: TGCTGGGCAAGGGCCCTGAGTGCCCTCCTGAGGACCCAGGGAGCAGCAGTGTTGGTTCTGAGCACACTGCTGACACTGGCAGCTGTGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR CCA 90 bp | CGGGGCAATCGAGCACAGCAGCAGAACTCCCCATGGAGCCCAGGCTaGCCTCAGACCCTCAGTGCTGAGGTCACAGTGTGCTCTCTGACA | + |
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Preference number: 1 (lower is better) Translates to: RGNRAQQQNSPWSPG*PQTLSAEVTVCSLT Trigger: TGTCAGAGAGCACACTGTGACCTCAGCACTGAGGGTCTGAGGCCAGCCTGGGCTCCATGGGGAGTTCTGCTGCTGTGCTCGATTGCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR CCA 90 bp | GCTCCCTGGGTCCTCAGGAGGGCACTCAGGGCCCTTGCCCAGCAGTaGGGAGAGGGGAGTTTACATTCCCCAGAGGAGGAAACTTTCACC | + |
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Preference number: 1 (lower is better) Translates to: APWVLRRALRALAQQ*GEGSLHSPEEETFT Trigger: GGTGAAAGTTTCCTCCTCTGGGGAATGTAAACTCCCCTCTCCCCACTGCTGGGCAAGGGCCCTGAGTGCCCTCCTGAGGACCCAGGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR TCA 90 bp | GGTGGCCAGCGTGCTAGTGGCAATCTTGGCAGAAGAGAACCCCGTTaGGAAGGGAAGCACTTGGGGAGCACGGTGCTGGCACTGGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: GGQRASGNLGRREPR*EGKHLGSTVLALES Trigger: TGACTCCAGTGCCAGCACCGTGCTCCCCAAGTGCTTCCCTTCTCAACGGGGTTCTCTTCTGCCAAGATTGCCACTAGCACGCTGGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR TCA 90 bp | TGGGCCCTGGAGTATGGAGAAGCCAATAGCCCTGGAAGTGAACCATaGTGGTGGCTCAGGACCTGGCTGTCGGGAGGCTCACCTATCCCC | + |
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Preference number: 1 (lower is better) Translates to: WALEYGEANSPGSEP*WWLRTWLSGGSPIP Trigger: GGGGATAGGTGAGCCTCCCGACAGCCAGGTCCTGAGCCACCATCATGGTTCACTTCCAGGGCTATTGGCTTCTCCATACTCCAGGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR CCA 90 bp | AGACAGAATGAACGGGGCAATCGAGCACAGCAGCAGAACTCCCCATaGAGCCCAGGCTGGCCTCAGACCCTCAGTGCTGAGGTCACAGTG | + |
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Preference number: 1 (lower is better) Translates to: RQNERGNRAQQQNSP*SPGWPQTLSAEVTV Trigger: CACTGTGACCTCAGCACTGAGGGTCTGAGGCCAGCCTGGGCTCCATGGGGAGTTCTGCTGCTGTGCTCGATTGCCCCGTTCATTCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR CCA 90 bp | CTGGTTAGCAAGCTGAGCTGGAGTGTCTGCTGCCCAGCTTCTTGGTaGGTGAGCATGCACGGGCGTAGTACACTTGCCACCCGAGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: LVSKLSWSVCCPASW*VSMHGRSTLATRAL Trigger: GAGAGCTCGGGTGGCAAGTGTACTACGCCCGTGCATGCTCACCCACCAAGAAGCTGGGCAGCAGACACTCCAGCTCAGCTTGCTAACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR TCA 90 bp | GACAGTACACAGCCGATAGCACAAGCTCCGGACCTGCAGACAGAATaGACGGGGCAATCGAGCACAGCAGCAGAACTCCCCATGGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: DSTQPIAQAPDLQTE*TGQSSTAAELPMEP Trigger: GGGCTCCATGGGGAGTTCTGCTGCTGTGCTCGATTGCCCCGTTCATTCTGTCTGCAGGTCCGGAGCTTGTGCTATCGGCTGTGTACTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR TCA 90 bp | GAACATGAGACTCAGTGTGTGCGCCTAAGGTGTAAGGCGGGTCACTaGGCAGAGCCCTGCCTTCTGCTCTGTGGCAGCACTTCACTGCCC | + |
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Preference number: 1 (lower is better) Translates to: EHETQCVRLRCKAGH*AEPCLLLCGSTSLP Trigger: GGGCAGTGAAGTGCTGCCACAGAGCAGAAGGCAGGGCTCTGCTCAGTGACCCGCCTTACACCTTAGGCGCACACACTGAGTCTCATGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR GCA 90 bp | AGGACAGCAGAGAGGCTCCTGGTTAGCAAGCTGAGCTGGAGTGTCTaGTGCCCAGCTTCTTGGTGGGTGAGCATGCACGGGCGTAGTACA | + |
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Preference number: 1 (lower is better) Translates to: RTAERLLVSKLSWSV*CPASWWVSMHGRST Trigger: TGTACTACGCCCGTGCATGCTCACCCACCAAGAAGCTGGGCAGCAGACACTCCAGCTCAGCTTGCTAACCAGGAGCCTCTCTGCTGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR TCA 90 bp | GCAGAACTCCCCATGGAGCCCAGGCTGGCCTCAGACCCTCAGTGCTaGGGTCACAGTGTGCTCTCTGACACTTGGTTCTCCTGTATTACA | + |
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Preference number: 1 (lower is better) Translates to: AELPMEPRLASDPQC*GHSVLSDTWFSCIT Trigger: TGTAATACAGGAGAACCAAGTGTCAGAGAGCACACTGTGACCTCAGCACTGAGGGTCTGAGGCCAGCCTGGGCTCCATGGGGAGTTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR CCA 90 bp | GTGGCAATCTTGGCAGAAGAGAACCCCGTTGAGAAGGGAAGCACTTaGGGAGCACGGTGCTGGCACTGGAGTCAGTCAAACCTAGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: VAILAEENPVEKGST*GARCWHWSQSNLAG Trigger: TCCTGCTAGGTTTGACTGACTCCAGTGCCAGCACCGTGCTCCCCAAGTGCTTCCCTTCTCAACGGGGTTCTCTTCTGCCAAGATTGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR GCA 90 bp | TGGAGCCCAGGCTGGCCTCAGACCCTCAGTGCTGAGGTCACAGTGTaGTCTCTGACACTTGGTTCTCCTGTATTACACATTTCCGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: WSPGWPQTLSAEVTV*SLTLGSPVLHISEP Trigger: AGGCTCGGAAATGTGTAATACAGGAGAACCAAGTGTCAGAGAGCACACTGTGACCTCAGCACTGAGGGTCTGAGGCCAGCCTGGGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR GCA 90 bp | TCCAGGAGAAAAGAAACATCATCCTCAAGACCGACTCCTCCGTCATaGTCGCTCCGATGCCGGCACCAAGAGTCACAGGTCATGAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: SRRKETSSSRPTPPS*SLRCRHQESQVMRL Trigger: CAGCCTCATGACCTGTGACTCTTGGTGCCGGCATCGGAGCGAGCATGACGGAGGAGTCGGTCTTGAGGATGATGTTTCTTTTCTCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR TCA 90 bp | GGTCCTGTAAGTGGTACCCAAGCAGGCGCGTCTTGTTTCTGGTCATaGCCTAAGTCATGGTTGACACTAAGTCAGGCCAGCTCTCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: GPVSGTQAGASCFWS*PKSWLTLSQASSQP Trigger: GGGCTGAGAGCTGGCCTGACTTAGTGTCAACCATGACTTAGGTCATGACCAGAAACAAGACGCGCCTGCTTGGGTACCACTTACAGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR TCA 90 bp | ACAGCAACCTCTGGCTTCCAAGCAGAAAGAAGGGGAGACCTGCTCTaGAACCTCACATTGCCAGGGAGAACACTCAGTGGTCGAAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: TATSGFQAERRGDLL*NLTLPGRTLSGRRA Trigger: TGCTCTTCGACCACTGAGTGTTCTCCCTGGCAATGTGAGGTTTCAGAGCAGGTCTCCCCTTCTTTCTGCTTGGAAGCCAGAGGTTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR GCA 90 bp | GACTGGCTAGTTCTTGAATATCCAGGTCTAACATGGGGTCGACAATaGTGTCAACCTGTGCGCCTGCTGAGCCACACGCACCACTGTGAT | + |
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Preference number: 1 (lower is better) Translates to: DWLVLEYPGLTWGRQ*CQPVRLLSHTHHCD Trigger: ATCACAGTGGTGCGTGTGGCTCAGCAGGCGCACAGGTTGACAGCATTGTCGACCCCATGTTAGACCTGGATATTCAAGAACTAGCCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
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| 3UTR TCA 90 bp | AGATGGCTCAGTGGGTCAAGGGGCTTGCTGCCACCACTGATGACCTaGATTCAAGTCTCAAGGACCCACACCGTGAAAGGAGAGAACAAA | + |
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Preference number: 1 (lower is better) Translates to: RWLSGSRGLLPPLMT*IQVSRTHTVKGENK Trigger: TTTGTTCTCTCCTTTCACGGTGTGGGTCCTTGAGACTTGAATTCAGGTCATCAGTGGTGGCAGCAAGCCCCTTGACCCACTGAGCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR TCA 90 bp | CATGCTCTCTCAATGGTCACTGTTAAGAGACCATCCCAAGAGCACTaGTTCCTCTTCCAGAGGACCTGGAATCAGCTCCCAGCACCCAAA | + |
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Preference number: 1 (lower is better) Translates to: HALSMVTVKRPSQEH*FLFQRTWNQLPAPK Trigger: TTTGGGTGCTGGGAGCTGATTCCAGGTCCTCTGGAAGAGGAATCAGTGCTCTTGGGATGGTCTCTTAACAGTGACCATTGAGAGAGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR GCA 90 bp | GTCATCAGAAGAAAGGCCCTCGATCTCATCTCGGTCCCCTCCTATTaGCATCCAGAAGGCTTTGGCCACCTTTTCTGCATGCAACTTTCT | + |
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Preference number: 1 (lower is better) Translates to: VIRRKALDLISVPSY*HPEGFGHLFCMQLS Trigger: AGAAAGTTGCATGCAGAAAAGGTGGCCAAAGCCTTCTGGATGGCAATAGGAGGGGACCGAGATGAGATCGAGGGCCTTTCTTCTGATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
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| 3UTR CCA 90 bp | AGGCACACATCTTCCTCTTGTTCGGAGCAGTTCACAGGAGAGGCCTaGTGTATGCCTATGATCCTTGAACCACATTCTACATTGCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: RHTSSSCSEQFTGEA*CMPMILEPHSTLPH Trigger: GTGGGGCAATGTAGAATGTGGTTCAAGGATCATAGGCATACACCAGGCCTCTCCTGTGAACTGCTCCGAACAAGAGGAAGATGTGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR CCA 90 bp | TCCCAGACGATCCAACTCCTTCTTCTGACCTCCACAGGCACCATGTaGTGTAGTCATACCTGCAGGCAAAAATGGCAAAACACCCATACA | + |
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Preference number: 1 (lower is better) Translates to: SQTIQLLLLTSTGTM*CSHTCRQKWQNTHT Trigger: TGTATGGGTGTTTTGCCATTTTTGCCTGCAGGTATGACTACACCACATGGTGCCTGTGGAGGTCAGAAGAAGGAGTTGGATCGTCTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR GCA 90 bp | TGGAAACAGCTGTGGTGTAAGCTGGTGGTAACTTTCTTCCCATTCTaGTTGGCCTTCTGTCACGTGACCTTGTCTTGCTTGCCTCTTACT | + |
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Preference number: 1 (lower is better) Translates to: WKQLWCKLVVTFFPF*LAFCHVTLSCLPLT Trigger: AGTAAGAGGCAAGCAAGACAAGGTCACGTGACAGAAGGCCAAGCAGAATGGGAAGAAAGTTACCACCAGCTTACACCACAGCTGTTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR CCA 90 bp | CCATACACCAACTTTATCAGATATGGGGTAGGGCCTGTTCTGAGTTaGGCTCGCATTTGGAAACAGCTGTGGTGTAAGCTGGTGGTAACT | + |
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Preference number: 1 (lower is better) Translates to: PYTNFIRYGVGPVLS*ARIWKQLWCKLVVT Trigger: AGTTACCACCAGCTTACACCACAGCTGTTTCCAAATGCGAGCCCAACTCAGAACAGGCCCTACCCCATATCTGATAAAGTTGGTGTATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR CCA 90 bp | CGGGATTCTCAAAGCACACCCCAGGAGTGTCAGTATCACCCAGGATaGTACAAATGTGGCTTTTCAGGTCCCACCATACACCAACTTTAT | + |
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Preference number: 1 (lower is better) Translates to: RDSQSTPQECQYHPG*YKCGFSGPTIHQLY Trigger: ATAAAGTTGGTGTATGGTGGGACCTGAAAAGCCACATTTGTACCATCCTGGGTGATACTGACACTCCTGGGGTGTGCTTTGAGAATCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR TCA 90 bp | AAGTTCTCCAGATCACCTCCTCCAGTGGTAAGACTGGCTAGTTCTTaGATATCCAGGTCTAACATGGGGTCGACAATGCTGTCAACCTGT | + |
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Preference number: 1 (lower is better) Translates to: KFSRSPPPVVRLASS*ISRSNMGSTMLSTC Trigger: ACAGGTTGACAGCATTGTCGACCCCATGTTAGACCTGGATATTCAAGAACTAGCCAGTCTTACCACTGGAGGAGGTGATCTGGAGAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
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| 3UTR GCA 90 bp | GAGGAAACTTTCACCTCTGTTTCTTATAGAGACACACCTGGCTTTTaGTGCTTTGTGGCAGGAACTCAGACACTGAACTTACTAAGGACT | + |
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Preference number: 1 (lower is better) Translates to: EETFTSVSYRDTPGF*CFVAGTQTLNLLRT Trigger: AGTCCTTAGTAAGTTCAGTGTCTGAGTTCCTGCCACAAAGCAGCAAAAGCCAGGTGTGTCTCTATAAGAAACAGAGGTGAAAGTTTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR TCA 90 bp | CAGAAGGCTTTGGCCACCTTTTCTGCATGCAACTTTCTTTGCTCATaGGGAAGCGTCGCAGCCTTGTCTTTCATTTCTTTTAACTTTGAA | + |
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Preference number: 1 (lower is better) Translates to: QKALATFSACNFLCS*GSVAALSFISFNFE Trigger: TTCAAAGTTAAAAGAAATGAAAGACAAGGCTGCGACGCTTCCTCATGAGCAAAGAAAGTTGCATGCAGAAAAGGTGGCCAAAGCCTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
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| 3UTR CCA 90 bp | TTTAAGCCCAGCTTCCCCAAATCTTTAGTTTCTCTAGATCAGATGTaGCCAAGTTCTATAAATAGAGAGCAAGCCAGCTGGTTCTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: FKPSFPKSLVSLDQM*PSSINREQASWFCQ Trigger: TTGACAGAACCAGCTGGCTTGCTCTCTATTTATAGAACTTGGCCACATCTGATCTAGAGAAACTAAAGATTTGGGGAAGCTGGGCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR CCA 90 bp | CTAGATCAGATGTGGCCAAGTTCTATAAATAGAGAGCAAGCCAGCTaGTTCTGTCAACCTTCTCATTCTCTGCCATATTTTCAAACTGTA | + |
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Preference number: 1 (lower is better) Translates to: LDQMWPSSINREQAS*FCQPSHSLPYFQTV Trigger: TACAGTTTGAAAATATGGCAGAGAATGAGAAGGTTGACAGAACCAGCTGGCTTGCTCTCTATTTATAGAACTTGGCCACATCTGATCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR GCA 90 bp | ACCAAGCAGATTGTACTTGTCAACAAAAATTGTGGACCTACTATGTaGCAAGCACTTTGTTACAGAAACAAGAAGTATTTAAGGCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: TKQIVLVNKNCGPTM*QALCYRNKKYLRQK Trigger: TTTCTGCCTTAAATACTTCTTGTTTCTGTAACAAAGTGCTTGGCACATAGTAGGTCCACAATTTTTGTTGACAAGTACAATCTGCTTGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR CCA 90 bp | GAAGTGAACCATGATGGTGGCTCAGGACCTGGCTGTCGGGAGGCTCACCTATCCCAGCAGAACTCCCCATaGAGCCCAGGCTGGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: EVNHDGGSGPGCREAHLSQQNSP*SPGWPQ Trigger: CTGAGGCCAGCCTGGGCTCCATGGGGAGTTCTGCTG...GGATAGGTGAGCCTCCCGACAGCCAGGTCCTGAGCCACCATCATGGTTCACTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR CCA 90 bp | GAAGTGAACCATGATGGTGGCTCAGGACCTGGCTGTCGGGAGGCTCACCTATCCAACACTGCTGCTCCCTaGGTCCTCAGGAGGGCACTC | + |
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Preference number: 2 (lower is better) Translates to: EVNHDGGSGPGCREAHLSNTAAP*VLRRAL Trigger: GAGTGCCCTCCTGAGGACCCAGGGAGCAGCAGTGTT...GGATAGGTGAGCCTCCCGACAGCCAGGTCCTGAGCCACCATCATGGTTCACTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR CCA 90 bp | GAAGTGAACCATGATGGTGGCTCAGGACCTGGCTGTCGGGAGGCTCACCTATCCTGGGGAGCACGGTGCTaGCACTGGAGTCAGTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: EVNHDGGSGPGCREAHLSWGARC*HWSQSN Trigger: GTTTGACTGACTCCAGTGCCAGCACCGTGCTCCCCA...GGATAGGTGAGCCTCCCGACAGCCAGGTCCTGAGCCACCATCATGGTTCACTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR CCA 90 bp | GAAGTGAACCATGATGGTGGCTCAGGACCTGGCTGTCGGGAGGCTCACCTATCCGCACGGTGCTGGCACTaGAGTCAGTCAAACCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: EVNHDGGSGPGCREAHLSARCWH*SQSNLA Trigger: TGCTAGGTTTGACTGACTCCAGTGCCAGCACCGTGC...GGATAGGTGAGCCTCCCGACAGCCAGGTCCTGAGCCACCATCATGGTTCACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR GCA 90 bp | CAACTTTATCAGATATGGGGTAGGGCCTGTTCTGAGTTGGGCTCGCATTTGGAAGGCACTCAGGGCCCTTaGCCAGCAGTGGGGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: QLYQIWGRACSELGSHLEGTQGP*PAVGRG Trigger: CCCTCTCCCCACTGCTGGGCAAGGGCCCTGAGTGCC...TTCCAAATGCGAGCCCAACTCAGAACAGGCCCTACCCCATATCTGATAAAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGCCCAGGTACACAAAGGGGATGTCAACTTCCAGTCTGAGCAGCCCACGAGCCCAGTGTCAGCAGTGTaGTCAGAACCAACACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TAQVHKGDVNFQSEQPTSPVSAV*SEPTLL Trigger: CAGCAGTGTTGGTTCTGAGCACACTGCTGACACTGG...GCTCGTGGGCTGCTCAGACTGGAAGTTGACATCCCCTTTGTGTACCTGGGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR CCA 90 bp | CCAAGAGTCACAGGTCATGAGGCTGGTTCAGCCTTAGCAGGGTTCAAAGTCAAGGGCAAGATGGCTCAGTaGGTCAAGGGGCTTGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PRVTGHEAGSALAGFKVKGKMAQ*VKGLAA Trigger: GGCAGCAAGCCCCTTGACCCACTGAGCCATCTTGCC...CTTGACTTTGAACCCTGCTAAGGCTGAACCAGCCTCATGACCTGTGACTCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGGCAGCACTTCACTGCCCAGGTACACAAAGGGGATGTCAACTTCCAGTCAGAAGAGAACCCCGTTaGGAAGGGAAGCACTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SVAALHCPGTQRGCQLPVRREPR*EGKHLG Trigger: CCCCAAGTGCTTCCCTTCTCAACGGGGTTCTCTTCT...GACTGGAAGTTGACATCCCCTTTGTGTACCTGGGCAGTGAAGTGCTGCCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR TCA 90 bp | ACTGCCCAGGTACACAAAGGGGATGTCAACTTCCAGTCTGAGCAGCCCACGAGCGAGCACTGGGGAAGATaGTTACATTCTCTCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: TAQVHKGDVNFQSEQPTSEHWGR*LHSLSL Trigger: CAGGGAGAGAGAATGTAATCATCTTCCCCAGTGCTC...GCTCGTGGGCTGCTCAGACTGGAAGTTGACATCCCCTTTGTGTACCTGGGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR GCA 90 bp | CCAAGAGTCACAGGTCATGAGGCTGGTTCAGCCTTAGCAGGGTTCAAAGTCAAGGCTCAGAACCAACACTaGTGCTCCCTGGGTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PRVTGHEAGSALAGFKVKAQNQH*CSLGPQ Trigger: CTGAGGACCCAGGGAGCAGCAGTGTTGGTTCTGAGC...CTTGACTTTGAACCCTGCTAAGGCTGAACCAGCCTCATGACCTGTGACTCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGGCAGCACTTCACTGCCCAGGTACACAAAGGGGATGTCAACTTCCAGTCCAGGGGACTCAAGCCTaGCTCACAGAAGTGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SVAALHCPGTQRGCQLPVQGTQA*LTEVSV Trigger: CACAGACACTTCTGTGAGGCAGGCTTGAGTCCCCTG...GACTGGAAGTTGACATCCCCTTTGTGTACCTGGGCAGTGAAGTGCTGCCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR CCA 90 bp | CAACTTTATCAGATATGGGGTAGGGCCTGTTCTGAGTTGGGCTCGCATTTGGAACCATGGAGCCCAGGCTaGCCTCAGACCCTCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: QLYQIWGRACSELGSHLEPWSPG*PQTLSA Trigger: AGCACTGAGGGTCTGAGGCCAGCCTGGGCTCCATGG...TTCCAAATGCGAGCCCAACTCAGAACAGGCCCTACCCCATATCTGATAAAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR TCA 90 bp | GTCACAGGTCATGAGGCTGGTTCAGCCTTAGCAGGGTTCAAAGTCAAGTTGAAGCCTGGAAGTGAACCATaGTGGTGGCTCAGGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: VTGHEAGSALAGFKVKLKPGSEP*WWLRTW Trigger: CCAGGTCCTGAGCCACCATCATGGTTCACTTCCAGG...CTTCAACTTGACTTTGAACCCTGCTAAGGCTGAACCAGCCTCATGACCTGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR CCA 90 bp | GTCACAGGTCATGAGGCTGGTTCAGCCTTAGCAGGGTTCAAAGTCAAGTTGAAGTCAGAATGTGGGGAGTaGGAACCCAGGAACCCGGAG | + |
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Preference number: 2 (lower is better) Translates to: VTGHEAGSALAGFKVKLKSECGE*EPRNPE Trigger: CTCCGGGTTCCTGGGTTCCCACTCCCCACATTCTGA...CTTCAACTTGACTTTGAACCCTGCTAAGGCTGAACCAGCCTCATGACCTGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR CCA 90 bp | GTCACAGGTCATGAGGCTGGTTCAGCCTTAGCAGGGTTCAAAGTCAAGTTGAAGCTCTTCCAGAGGACCTaGAATCAGCTCCCAGCACCC | + |
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Preference number: 2 (lower is better) Translates to: VTGHEAGSALAGFKVKLKLFQRT*NQLPAP Trigger: GGGTGCTGGGAGCTGATTCCAGGTCCTCTGGAAGAG...CTTCAACTTGACTTTGAACCCTGCTAAGGCTGAACCAGCCTCATGACCTGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| 3UTR-3UTR CCA 90 bp | CAACTTTATCAGATATGGGGTAGGGCCTGTTCTGAGTTGGGCTCGCATTTGGAATGCCCAGCTTCTTGGTaGGTGAGCATGCACGGGCGT | + |
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Preference number: 2 (lower is better) Translates to: QLYQIWGRACSELGSHLECPASW*VSMHGR Trigger: ACGCCCGTGCATGCTCACCCACCAAGAAGCTGGGCA...TTCCAAATGCGAGCCCAACTCAGAACAGGCCCTACCCCATATCTGATAAAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CAA 90 bp | CGTCATCAGAAGAAAGGCCCTCGATCTCATCTCGGTCCCCTCCTATaGCCATCCAGAAGGCTTTGGCCACCTTTTCTGCATGCAACTTTC | + |
|
Preference number: 2 (lower is better) Translates to: RHQKKGPRSHLGPLL*PSRRLWPPFLHATF Trigger: GAAAGTTGCATGCAGAAAAGGTGGCCAAAGCCTTCTGGATGGCAATAGGAGGGGACCGAGATGAGATCGAGGGCCTTTCTTCTGATGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTGCCCAGGTACACAAAGGGGATGTCAACTTCCAGTCTGAGCAGCCCACGAGCCTCCTCAGTCACTTATaGGGCAGGAACAAAGATTTC | + |
|
Preference number: 2 (lower is better) Translates to: TAQVHKGDVNFQSEQPTSLLSHL*GRNKDF Trigger: GAAATCTTTGTTCCTGCCGCATAAGTGACTGAGGAG...GCTCGTGGGCTGCTCAGACTGGAAGTTGACATCCCCTTTGTGTACCTGGGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR GCA 90 bp | CAACTTTATCAGATATGGGGTAGGGCCTGTTCTGAGTTGGGCTCGCATTTGGAACAGAGCCCTGCCTTCTaGTCTGTGGCAGCACTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: QLYQIWGRACSELGSHLEQSPAF*SVAALH Trigger: GTGAAGTGCTGCCACAGAGCAGAAGGCAGGGCTCTG...TTCCAAATGCGAGCCCAACTCAGAACAGGCCCTACCCCATATCTGATAAAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTTTGGCCACCTTTTCTGCATGCAACTTTCTTTGCTCATGAGGAAGCGTCGGCACGGTGCTGGCACTaGAGTCAGTCAAACCTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RLWPPFLHATFFAHEEASARCWH*SQSNLA Trigger: TGCTAGGTTTGACTGACTCCAGTGCCAGCACCGTGC...CGACGCTTCCTCATGAGCAAAGAAAGTTGCATGCAGAAAAGGTGGCCAAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| 3UTR-3UTR CCA 90 bp | CAACTTTATCAGATATGGGGTAGGGCCTGTTCTGAGTTGGGCTCGCATTTGGAACCTGGGGCTGGGCCCTaGAGTATGGAGAAGCCAATA | + |
|
Preference number: 2 (lower is better) Translates to: QLYQIWGRACSELGSHLEPGAGP*SMEKPI Trigger: TATTGGCTTCTCCATACTCCAGGGCCCAGCCCCAGG...TTCCAAATGCGAGCCCAACTCAGAACAGGCCCTACCCCATATCTGATAAAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR TCA 90 bp | CAACTTTATCAGATATGGGGTAGGGCCTGTTCTGAGTTGGGCTCGCATTTGGAATGGCCTTCTGTCACGTaGCCTTGTCTTGCTTGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: QLYQIWGRACSELGSHLEWPSVT*PCLACL Trigger: GAGGCAAGCAAGACAAGGTCACGTGACAGAAGGCCA...TTCCAAATGCGAGCCCAACTCAGAACAGGCCCTACCCCATATCTGATAAAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR TCA 90 bp | ATCAGAAGAAAGGCCCTCGATCTCATCTCGGTCCCCTCCTATTGCCATCCAGAAAACTTTCTTTGCTCATaGGGAAGCGTCGCAGCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: IRRKALDLISVPSYCHPENFLCS*GSVAAL Trigger: CAAGGCTGCGACGCTTCCTCATGAGCAAAGAAAGTT...TTCTGGATGGCAATAGGAGGGGACCGAGATGAGATCGAGGGCCTTTCTTCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAAGAGTCACAGGTCATGAGGCTGGTTCAGCCTTAGCAGGGTTCAAAGTCAAGTTTCCTTTAGAACTTTaGTCTGTGCTCCCCTGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: PRVTGHEAGSALAGFKVKFPLEL*SVLPWG Trigger: GCCCCAGGGGAGCACAGAGCAAAGTTCTAAAGGAAA...CTTGACTTTGAACCCTGCTAAGGCTGAACCAGCCTCATGACCTGTGACTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAAGAGTCACAGGTCATGAGGCTGGTTCAGCCTTAGCAGGGTTCAAAGTCAAGAGGGGCCATGTTTCATaGTCTCTCAATGGTCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: PRVTGHEAGSALAGFKVKRGHVS*SLNGHC Trigger: ACAGTGACCATTGAGAGAGCATGAAACATGGCCCCT...CTTGACTTTGAACCCTGCTAAGGCTGAACCAGCCTCATGACCTGTGACTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR CCA 90 bp | ACTGCCCAGGTACACAAAGGGGATGTCAACTTCCAGTCTGAGCAGCCCACGAGCTTCATGCTCTCTCAATaGTCACTGTTAAGAGACCAT | + |
|
Preference number: 2 (lower is better) Translates to: TAQVHKGDVNFQSEQPTSFMLSQ*SLLRDH Trigger: ATGGTCTCTTAACAGTGACCATTGAGAGAGCATGAA...GCTCGTGGGCTGCTCAGACTGGAAGTTGACATCCCCTTTGTGTACCTGGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR TCA 90 bp | CAACTTTATCAGATATGGGGTAGGGCCTGTTCTGAGTTGGGCTCGCATTTGGAAATCCTTAGAGACCCATaGCAATGCAGGGGACTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: QLYQIWGRACSELGSHLEILRDP*QCRGLK Trigger: CTTGAGTCCCCTGCATTGTCATGGGTCTCTAAGGAT...TTCCAAATGCGAGCCCAACTCAGAACAGGCCCTACCCCATATCTGATAAAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTGGCAGCACTTCACTGCCCAGGTACACAAAGGGGATGTCAACTTCCAGTCTGTGGACCTACTATGTaGCAAGCACTTTGTTACAGA | + |
|
Preference number: 2 (lower is better) Translates to: SVAALHCPGTQRGCQLPVCGPTM*QALCYR Trigger: TCTGTAACAAAGTGCTTGGCACATAGTAGGTCCACA...GACTGGAAGTTGACATCCCCTTTGTGTACCTGGGCAGTGAAGTGCTGCCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAAGAGTCACAGGTCATGAGGCTGGTTCAGCCTTAGCAGGGTTCAAAGTCAAGGGTCATCAGCGCATTTaGTTAAGCTCTCTCCTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: PRVTGHEAGSALAGFKVKGHQRI*LSSLLQ Trigger: TTGAAGGAGAGAGCTTAAGCAAATGCGCTGATGACC...CTTGACTTTGAACCCTGCTAAGGCTGAACCAGCCTCATGACCTGTGACTCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTGGCAGCACTTCACTGCCCAGGTACACAAAGGGGATGTCAACTTCCAGTCGTGCTCTCTGACACTTaGTTCTCCTGTATTACACAT | + |
|
Preference number: 2 (lower is better) Translates to: SVAALHCPGTQRGCQLPVVLSDT*FSCITH Trigger: ATGTGTAATACAGGAGAACCAAGTGTCAGAGAGCAC...GACTGGAAGTTGACATCCCCTTTGTGTACCTGGGCAGTGAAGTGCTGCCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR CCA 90 bp | GTCACAGGTCATGAGGCTGGTTCAGCCTTAGCAGGGTTCAAAGTCAAGTTGAAGCTTGACAGCAACCTCTaGCTTCCAAGCAGAAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VTGHEAGSALAGFKVKLKLDSNL*LPSRKK Trigger: CTTCTTTCTGCTTGGAAGCCAGAGGTTGCTGTCAAG...CTTCAACTTGACTTTGAACCCTGCTAAGGCTGAACCAGCCTCATGACCTGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTCCTAGGGAGTGTCATTAATGCAGTCCAAGTCCTTAAATTCAGGTTAAATGTGCTCCCCTGGGGCTaGGCCCTGGAGTATGGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: GFLGSVINAVQVLKFRLNVLPWG*ALEYGE Trigger: TTCTCCATACTCCAGGGCCCAGCCCCAGGGGAGCAC...ATTTAACCTGAATTTAAGGACTTGGACTGCATTAATGACACTCCCTAGGAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTCCTAGGGAGTGTCATTAATGCAGTCCAAGTCCTTAAATTCAGGTTAAATTGCTCTGTGCTCCCCTaGGGCTGGGCCCTGGAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: GFLGSVINAVQVLKFRLNCSVLP*GWALEY Trigger: ATACTCCAGGGCCCAGCCCCAGGGGAGCACAGAGCA...ATTTAACCTGAATTTAAGGACTTGGACTGCATTAATGACACTCCCTAGGAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR GCA 90 bp | CAACTTTATCAGATATGGGGTAGGGCCTGTTCTGAGTTGGGCTCGCATTTGGAATCTGAAACCTCACATTaGCAGGGAGAACACTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: QLYQIWGRACSELGSHLESETSH*QGEHSV Trigger: CACTGAGTGTTCTCCCTGGCAATGTGAGGTTTCAGA...TTCCAAATGCGAGCCCAACTCAGAACAGGCCCTACCCCATATCTGATAAAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR CCA 90 bp | CAACTTTATCAGATATGGGGTAGGGCCTGTTCTGAGTTGGGCTCGCATTTGGAAACCTGCAGGCAAAAATaGCAAAACACCCATACATGC | + |
|
Preference number: 2 (lower is better) Translates to: QLYQIWGRACSELGSHLETCRQK*QNTHTC Trigger: GCATGTATGGGTGTTTTGCCATTTTTGCCTGCAGGT...TTCCAAATGCGAGCCCAACTCAGAACAGGCCCTACCCCATATCTGATAAAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTCCTAGGGAGTGTCATTAATGCAGTCCAAGTCCTTAAATTCAGGTTAAATTTCAGGTCCTGTAAGTaGTACCCAAGCAGGCGCGTC | + |
|
Preference number: 2 (lower is better) Translates to: GFLGSVINAVQVLKFRLNFRSCK*YPSRRV Trigger: GACGCGCCTGCTTGGGTACCACTTACAGGACCTGAA...ATTTAACCTGAATTTAAGGACTTGGACTGCATTAATGACACTCCCTAGGAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR GCA 90 bp | TATATAGGCAAAGTAGATTCTGAAACATTACAGGCAACAAACTCTTCGGACTGTCCATCACCAGGATCATaGCTCCTCCCTGGGTTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: YIGKVDSETLQATNSSDCPSPGS*LLPGLV Trigger: AACCAACCCAGGGAGGAGGCATGATCCTGGTGATGG...ACAGTCCGAAGAGTTTGTTGCCTGTAATGTTTCAGAATCTACTTTGCCTATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR TCA 90 bp | CAACTTTATCAGATATGGGGTAGGGCCTGTTCTGAGTTGGGCTCGCATTTGGAAGAGGATAGATACACATaGCTGCTATTAACTGTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: QLYQIWGRACSELGSHLEEDRYT*LLLTVH Trigger: ATGAACAGTTAATAGCAGTCATGTGTATCTATCCTC...TTCCAAATGCGAGCCCAACTCAGAACAGGCCCTACCCCATATCTGATAAAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR GCA 90 bp | TATATAGGCAAAGTAGATTCTGAAACATTACAGGCAACAAACTCTTCGGACTGTACACCTGGCTTTTGCTaGTTTGTGGCAGGAACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: YIGKVDSETLQATNSSDCTPGFC*FVAGTQ Trigger: CTGAGTTCCTGCCACAAAGCAGCAAAAGCCAGGTGT...ACAGTCCGAAGAGTTTGTTGCCTGTAATGTTTCAGAATCTACTTTGCCTATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTTTCCTAGGGAGTGTCATTAATGCAGTCCAAGTCCTTAAATTCAGGTTAAATAGGCAAAGTAGATTCTaGAACATTACAGGCAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: GFLGSVINAVQVLKFRLNRQSRF*NITGNK Trigger: TTTGTTGCCTGTAATGTTTCAGAATCTACTTTGCCT...ATTTAACCTGAATTTAAGGACTTGGACTGCATTAATGACACTCCCTAGGAAACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR GCA 72 bp | TGCTCCCTGGGTCCTCAGGAGGGCACTCAGGGCCCTTaGCCAGCAGTGGGGAGAGGGGAGTTTACATTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: CSLGPQEGTQGP*PAVGRGEFTFP Trigger: GGGGAATGTAAACTCCCCTCTCCCCACTGCTGGGCAAGGGCCCTGAGTGCCCTCCTGAGGACCCAGGGAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | CGAGCACAGCAGCAGAACTCCCCATGGAGCCCAGGCTaGCCTCAGACCCTCAGTGCTGAGGTCACAGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RAQQQNSPWSPG*PQTLSAEVTVC Trigger: GCACACTGTGACCTCAGCACTGAGGGTCTGAGGCCAGCCTGGGCTCCATGGGGAGTTCTGCTGCTGTGCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR TCA 72 bp | CATGGGGTCGACAATGCTGTCAACCTGTGCGCCTGCTaGGCCACACGCACCACTGTGATGGCCAGGGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HGVDNAVNLCAC*ATRTTVMAREG Trigger: TCCCTCCCTGGCCATCACAGTGGTGCGTGTGGCTCAGCAGGCGCACAGGTTGACAGCATTGTCGACCCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| 3UTR GCA 72 bp | TGCCAGTGTCAGCAGTGTGCTCAGAACCAACACTGCTaGTCCCTGGGTCCTCAGGAGGGCACTCAGGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: CQCQQCAQNQHC*SLGPQEGTQGP Trigger: AGGGCCCTGAGTGCCCTCCTGAGGACCCAGGGAGCAGCAGTGTTGGTTCTGAGCACACTGCTGACACTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | GTCCTCAGGAGGGCACTCAGGGCCCTTGCCCAGCAGTaGGGAGAGGGGAGTTTACATTCCCCAGAGGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VLRRALRALAQQ*GEGSLHSPEEE Trigger: TTCCTCCTCTGGGGAATGTAAACTCCCCTCTCCCCACTGCTGGGCAAGGGCCCTGAGTGCCCTCCTGAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGGAACCCGGAGCAAAGCAGCACCCACTGTTTCTAGAATACCACCATCACGGGCACTCAGGGCCCTaGCCCAGCAGTGGGGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TQEPGAKQHPLFLEYHHHGHSGP*PSSGER Trigger: CCTCTCCCCACTGCTGGGCAAGGGCCCTGAGTGCCC...GTGATGGTGGTATTCTAGAAACAGTGGGTGCTGCTTTGCTCCGGGTTCCTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR GCA 72 bp | AGGCTCCTGGTTAGCAAGCTGAGCTGGAGTGTCTGCTaGCCAGCTTCTTGGTGGGTGAGCATGCACGGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: RLLVSKLSWSVC*PASWWVSMHGR Trigger: ACGCCCGTGCATGCTCACCCACCAAGAAGCTGGGCAGCAGACACTCCAGCTCAGCTTGCTAACCAGGAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR GCA 72 bp | GAGAGGCTCCTGGTTAGCAAGCTGAGCTGGAGTGTCTaGTGCCCAGCTTCTTGGTGGGTGAGCATGCACGGG | + |
|
Preference number: 3 (lower is better) Translates to: ERLLVSKLSWSV*CPASWWVSMHG Trigger: CCCGTGCATGCTCACCCACCAAGAAGCTGGGCAGCAGACACTCCAGCTCAGCTTGCTAACCAGGAGCCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | GGCGGGTCACTGAGCAGAGCCCTGCCTTCTGCTCTGTaGCAGCACTTCACTGCCCAGGTACACAAAGGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GGSLSRALPSAL*QHFTAQVHKGD Trigger: ATCCCCTTTGTGTACCTGGGCAGTGAAGTGCTGCCACAGAGCAGAAGGCAGGGCTCTGCTCAGTGACCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR TCA 72 bp | CAGCCGATAGCACAAGCTCCGGACCTGCAGACAGAATaGACGGGGCAATCGAGCACAGCAGCAGAACTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: QPIAQAPDLQTE*TGQSSTAAELP Trigger: GGGGAGTTCTGCTGCTGTGCTCGATTGCCCCGTTCATTCTGTCTGCAGGTCCGGAGCTTGTGCTATCGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR GCA 72 bp | TCCTCAAGACCGACTCCTCCGTCATGCTCGCTCCGATaGCGGCACCAAGAGTCACAGGTCATGAGGCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SSRPTPPSCSLR*RHQESQVMRLV Trigger: AACCAGCCTCATGACCTGTGACTCTTGGTGCCGGCATCGGAGCGAGCATGACGGAGGAGTCGGTCTTGAGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | AAGCTGAGCTGGAGTGTCTGCTGCCCAGCTTCTTGGTaGGTGAGCATGCACGGGCGTAGTACACTTGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: KLSWSVCCPASW*VSMHGRSTLAT Trigger: GGTGGCAAGTGTACTACGCCCGTGCATGCTCACCCACCAAGAAGCTGGGCAGCAGACACTCCAGCTCAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | AGCAAGCTGAGCTGGAGTGTCTGCTGCCCAGCTTCTTaGTGGGTGAGCATGCACGGGCGTAGTACACTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SKLSWSVCCPAS*WVSMHGRSTLA Trigger: GGCAAGTGTACTACGCCCGTGCATGCTCACCCACCAAGAAGCTGGGCAGCAGACACTCCAGCTCAGCTTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | AGGACAGCAGAGAGGCTCCTGGTTAGCAAGCTGAGCTaGAGTGTCTGCTGCCCAGCTTCTTGGTGGGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RTAERLLVSKLS*SVCCPASWWVS Trigger: GCTCACCCACCAAGAAGCTGGGCAGCAGACACTCCAGCTCAGCTTGCTAACCAGGAGCCTCTCTGCTGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR TCA 72 bp | CGTGCTAGTGGCAATCTTGGCAGAAGAGAACCCCGTTaGGAAGGGAAGCACTTGGGGAGCACGGTGCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RASGNLGRREPR*EGKHLGSTVLA Trigger: TGCCAGCACCGTGCTCCCCAAGTGCTTCCCTTCTCAACGGGGTTCTCTTCTGCCAAGATTGCCACTAGCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR TCA 72 bp | GCTCGCTCCGATGCCGGCACCAAGAGTCACAGGTCATaGGGCTGGTTCAGCCTTAGCAGGGTTCAAAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: ARSDAGTKSHRS*GWFSLSRVQSQ Trigger: TTGACTTTGAACCCTGCTAAGGCTGAACCAGCCTCATGACCTGTGACTCTTGGTGCCGGCATCGGAGCGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR GCA 72 bp | AACCCCGTTGAGAAGGGAAGCACTTGGGGAGCACGGTaGTGGCACTGGAGTCAGTCAAACCTAGCAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: NPVEKGSTWGAR*WHWSQSNLAGR Trigger: TCTTCCTGCTAGGTTTGACTGACTCCAGTGCCAGCACCGTGCTCCCCAAGTGCTTCCCTTCTCAACGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | TTGGCAGAAGAGAACCCCGTTGAGAAGGGAAGCACTTaGGGAGCACGGTGCTGGCACTGGAGTCAGTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LAEENPVEKGST*GARCWHWSQSN Trigger: GTTTGACTGACTCCAGTGCCAGCACCGTGCTCCCCAAGTGCTTCCCTTCTCAACGGGGTTCTCTTCTGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | CCCACTGCTTGGAACTGGTGCCTTGACAGCAACCTCTaGCTTCCAAGCAGAAAGAAGGGGAGACCTGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PTAWNWCLDSNL*LPSRKKGRPAL Trigger: CAGAGCAGGTCTCCCCTTCTTTCTGCTTGGAAGCCAGAGGTTGCTGTCAAGGCACCAGTTCCAAGCAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | TTTCCTTTAGAACTTTGCTCTGTGCTCCCCTGGGGCTaGGCCCTGGAGTATGGAGAAGCCAATAGCCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FPLELCSVLPWG*ALEYGEANSPG Trigger: TCCAGGGCTATTGGCTTCTCCATACTCCAGGGCCCAGCCCCAGGGGAGCACAGAGCAAAGTTCTAAAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | CCCTCTTTTCCTTTAGAACTTTGCTCTGTGCTCCCCTaGGGCTGGGCCCTGGAGTATGGAGAAGCCAATAGC | + |
|
Preference number: 3 (lower is better) Translates to: PSFPLELCSVLP*GWALEYGEANS Trigger: GCTATTGGCTTCTCCATACTCCAGGGCCCAGCCCCAGGGGAGCACAGAGCAAAGTTCTAAAGGAAAAGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | CCAAGCTCAAAGCTTACAAGATCAGAATGTGGGGAGTaGGAACCCAGGAACCCGGAGCAAAGCAGCACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PSSKLTRSECGE*EPRNPEQSSTH Trigger: GTGGGTGCTGCTTTGCTCCGGGTTCCTGGGTTCCCACTCCCCACATTCTGATCTTGTAAGCTTTGAGCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR TCA 72 bp | AGTGGGTCAAGGGGCTTGCTGCCACCACTGATGACCTaGATTCAAGTCTCAAGGACCCACACCGTGAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SGSRGLLPPLMT*IQVSRTHTVKG Trigger: TCCTTTCACGGTGTGGGTCCTTGAGACTTGAATTCAGGTCATCAGTGGTGGCAGCAAGCCCCTTGACCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR GCA 72 bp | CAGAAAGAAGGGGAGACCTGCTCTGAAACCTCACATTaGCAGGGAGAACACTCAGTGGTCGAAGAGCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: QKEGETCSETSH*QGEHSVVEEHS Trigger: GCTGTGCTCTTCGACCACTGAGTGTTCTCCCTGGCAATGTGAGGTTTCAGAGCAGGTCTCCCCTTCTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR GCA 72 bp | GTTCTTGAATATCCAGGTCTAACATGGGGTCGACAATaGTGTCAACCTGTGCGCCTGCTGAGCCACACGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VLEYPGLTWGRQ*CQPVRLLSHTH Trigger: GTGCGTGTGGCTCAGCAGGCGCACAGGTTGACAGCATTGTCGACCCCATGTTAGACCTGGATATTCAAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| 3UTR GCA 72 bp | AGAAAGGCCCTCGATCTCATCTCGGTCCCCTCCTATTaGCATCCAGAAGGCTTTGGCCACCTTTTCTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: RKALDLISVPSY*HPEGFGHLFCM Trigger: CATGCAGAAAAGGTGGCCAAAGCCTTCTGGATGGCAATAGGAGGGGACCGAGATGAGATCGAGGGCCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTGGCAGCACTTCACTGCCCAGGTACACAAAGGGGATGTCAACTTCCAGTCGTGCTAGTGGCAATCTaGGCAGAAGAGAACCCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: SVAALHCPGTQRGCQLPVVLVAI*AEENPV Trigger: AACGGGGTTCTCTTCTGCCAAGATTGCCACTAGCAC...GACTGGAAGTTGACATCCCCTTTGTGTACCTGGGCAGTGAAGTGCTGCCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR TCA 72 bp | TCTGGCTTCCAAGCAGAAAGAAGGGGAGACCTGCTCTaGAACCTCACATTGCCAGGGAGAACACTCAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SGFQAERRGDLL*NLTLPGRTLSG Trigger: ACCACTGAGTGTTCTCCCTGGCAATGTGAGGTTTCAGAGCAGGTCTCCCCTTCTTTCTGCTTGGAAGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR TCA 72 bp | AGTGGTACCCAAGCAGGCGCGTCTTGTTTCTGGTCATaGCCTAAGTCATGGTTGACACTAAGTCAGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SGTQAGASCFWS*PKSWLTLSQAS Trigger: GCTGGCCTGACTTAGTGTCAACCATGACTTAGGTCATGACCAGAAACAAGACGCGCCTGCTTGGGTACCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR TCA 72 bp | TCAGTGAGCTCACACCTCCGTAGCATTAAAGCCATCTaGTGGCCACTTCTTTCCCAAGGACAGCAGAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SVSSHLRSIKAI*WPLLSQGQQRG Trigger: GCCTCTCTGCTGTCCTTGGGAAAGAAGTGGCCATCAGATGGCTTTAATGCTACGGAGGTGTGAGCTCACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR GCA 72 bp | CAACCTCTGGCTTCCAAGCAGAAAGAAGGGGAGACCTaGTCTGAAACCTCACATTGCCAGGGAGAACACTCA | + |
|
Preference number: 3 (lower is better) Translates to: QPLASKQKEGET*SETSHCQGEHS Trigger: TGAGTGTTCTCCCTGGCAATGTGAGGTTTCAGAGCAGGTCTCCCCTTCTTTCTGCTTGGAAGCCAGAGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR GCA 72 bp | CAGCTCTCAGCCCACGATGAGTACCATGTACATGGCTaGATATCCTTAGAGACCCATGACAATGCAGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: QLSAHDEYHVHG*ISLETHDNAGD Trigger: GTCCCCTGCATTGTCATGGGTCTCTAAGGATATGCAGCCATGTACATGGTACTCATCGTGGGCTGAGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | GGTAAACCCAAGCTCAAAGCTTACAAGATCAGAATGTaGGGAGTGGGAACCCAGGAACCCGGAGCAAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GKPKLKAYKIRM*GVGTQEPGAKQ Trigger: CTGCTTTGCTCCGGGTTCCTGGGTTCCCACTCCCCACATTCTGATCTTGTAAGCTTTGAGCTTGGGTTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | TTCCAGAGGACCTGGAATCAGCTCCCAGCACCCAAATaGCAGCTCACAAACATCTGTAATGCCAGTCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: FQRTWNQLPAPK*QLTNICNASPR Trigger: TCTGGGACTGGCATTACAGATGTTTGTGAGCTGCCATTTGGGTGCTGGGAGCTGATTCCAGGTCCTCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | CCCTGTAGACGGGTGTGTGTGTGTGAAGAGCACGTCTaGTCATCAGCGCATTTGCTTAAGCTCTCTCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PCRRVCVCEEHV*SSAHLLKLSPS Trigger: TGAAGGAGAGAGCTTAAGCAAATGCGCTGATGACCAGACGTGCTCTTCACACACACACACCCGTCTACAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGGAACCCGGAGCAAAGCAGCACCCACTGTTTCTAGAATACCACCATCACTTTTCCTTTAGAACTTaGCTCTGTGCTCCCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TQEPGAKQHPLFLEYHHHFSFRT*LCAPLG Trigger: CCCCAGGGGAGCACAGAGCAAAGTTCTAAAGGAAAA...GTGATGGTGGTATTCTAGAAACAGTGGGTGCTGCTTTGCTCCGGGTTCCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR CAA 90 bp | ACGGTGCTGGCACTGGAGTCAGTCAAACCTAGCAGGAAGAGCTTAGTGCTCGTCGGAAGCGTCGCAGCCTaGTCTTTCATTTCTTTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: TVLALESVKPSRKSLVLVGSVAA*SFISFN Trigger: GTTAAAAGAAATGAAAGACAAGGCTGCGACGCTTCC...GACGAGCACTAAGCTCTTCCTGCTAGGTTTGACTGACTCCAGTGCCAGCACCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| 3UTR TCA 72 bp | GTACCATGTACATGGCTGCATATCCTTAGAGACCCATaGCAATGCAGGGGACTCAAGCCTGCCTCACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VPCTWLHILRDP*QCRGLKPASQK Trigger: CTTCTGTGAGGCAGGCTTGAGTCCCCTGCATTGTCATGGGTCTCTAAGGATATGCAGCCATGTACATGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR TCA 72 bp | TGTAATGCCAGTCCCAGACGATCCAACTCCTTCTTCTaGCCTCCACAGGCACCATGTGGTGTAGTCATACCT | + |
|
Preference number: 3 (lower is better) Translates to: CNASPRRSNSFF*PPQAPCGVVIP Trigger: AGGTATGACTACACCACATGGTGCCTGTGGAGGTCAGAAGAAGGAGTTGGATCGTCTGGGACTGGCATTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | CAAAGCACACCCCAGGAGTGTCAGTATCACCCAGGATaGTACAAATGTGGCTTTTCAGGTCCCACCATACAC | + |
|
Preference number: 3 (lower is better) Translates to: QSTPQECQYHPG*YKCGFSGPTIH Trigger: GTGTATGGTGGGACCTGAAAAGCCACATTTGTACCATCCTGGGTGATACTGACACTCCTGGGGTGTGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR TCA 72 bp | CGGAGCAGTTCACAGGAGAGGCCTGGTGTATGCCTATaGTCCTTGAACCACATTCTACATTGCCCCACTATT | + |
|
Preference number: 3 (lower is better) Translates to: RSSSQERPGVCL*SLNHILHCPTI Trigger: AATAGTGGGGCAATGTAGAATGTGGTTCAAGGATCATAGGCATACACCAGGCCTCTCCTGTGAACTGCTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR TCA 72 bp | TCAATGGTCACTGTTAAGAGACCATCCCAAGAGCACTaGTTCCTCTTCCAGAGGACCTGGAATCAGCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SMVTVKRPSQEH*FLFQRTWNQLP Trigger: TGGGAGCTGATTCCAGGTCCTCTGGAAGAGGAATCAGTGCTCTTGGGATGGTCTCTTAACAGTGACCATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR GCA 72 bp | CTGTGGTGTAAGCTGGTGGTAACTTTCTTCCCATTCTaGTTGGCCTTCTGTCACGTGACCTTGTCTTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LWCKLVVTFFPF*LAFCHVTLSCL Trigger: CAAGCAAGACAAGGTCACGTGACAGAAGGCCAAGCAGAATGGGAAGAAAGTTACCACCAGCTTACACCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR TCA 72 bp | AGATCACCTCCTCCAGTGGTAAGACTGGCTAGTTCTTaGATATCCAGGTCTAACATGGGGTCGACAATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSPPPVVRLASS*ISRSNMGSTML Trigger: CAGCATTGTCGACCCCATGTTAGACCTGGATATTCAAGAACTAGCCAGTCTTACCACTGGAGGAGGTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| 3UTR CCA 72 bp | CACAAGGGTAAGGGGCCATGTTTCATGCTCTCTCAATaGTCACTGTTAAGAGACCATCCCAAGAGCACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: HKGKGPCFMLSQ*SLLRDHPKSTD Trigger: ATCAGTGCTCTTGGGATGGTCTCTTAACAGTGACCATTGAGAGAGCATGAAACATGGCCCCTTACCCTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | AACTTTATCAGATATGGGGTAGGGCCTGTTCTGAGTTaGGCTCGCATTTGGAAACAGCTGTGGTGTAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: NFIRYGVGPVLS*ARIWKQLWCKL Trigger: CAGCTTACACCACAGCTGTTTCCAAATGCGAGCCCAACTCAGAACAGGCCCTACCCCATATCTGATAAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR CAA 90 bp | TATATAGGCAAAGTAGATTCTGAAACATTACAGGCAACAAACTCTTCGGACTGTTGCCTCCTCCCTGGGTaGGTTCTGGCCTGGCTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: YIGKVDSETLQATNSSDCCLLPG*VLAWLS Trigger: GCTTAGCCAGGCCAGAACCAACCCAGGGAGGAGGCA...ACAGTCCGAAGAGTTTGTTGCCTGTAATGTTTCAGAATCTACTTTGCCTATATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTGGCAGCACTTCACTGCCCAGGTACACAAAGGGGATGTCAACTTCCAGTCCCAAGCAGATTGTACTaGTCAACAAAAATTGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SVAALHCPGTQRGCQLPVPSRLY*STKIVD Trigger: GTCCACAATTTTTGTTGACAAGTACAATCTGCTTGG...GACTGGAAGTTGACATCCCCTTTGTGTACCTGGGCAGTGAAGTGCTGCCACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR GCA 72 bp | GGTTTCCACACTGTCATTTCACTCCTCAGTCACTTATaGGGCAGGAACAAAGATTTCTCCCTAACGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GFHTVISLLSHL*GRNKDFSLTPF Trigger: GAAAGGCGTTAGGGAGAAATCTTTGTTCCTGCCGCATAAGTGACTGAGGAGTGAAATGACAGTGTGGAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | CCAGGAGTGTCAGTATCACCCAGGATGGTACAAATGTaGCTTTTCAGGTCCCACCATACACCAACTTTATCA | + |
|
Preference number: 3 (lower is better) Translates to: PGVSVSPRMVQM*LFRSHHTPTLS Trigger: TGATAAAGTTGGTGTATGGTGGGACCTGAAAAGCCACATTTGTACCATCCTGGGTGATACTGACACTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTCCTAGGGAGTGTCATTAATGCAGTCCAAGTCCTTAAATTCAGGTTAAATCAGAAGAGAACCCCGTaGAGAAGGGAAGCACTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GFLGSVINAVQVLKFRLNQKRTP*RREALG Trigger: CCCAAGTGCTTCCCTTCTCAACGGGGTTCTCTTCTG...ATTTAACCTGAATTTAAGGACTTGGACTGCATTAATGACACTCCCTAGGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTCCTAGGGAGTGTCATTAATGCAGTCCAAGTCCTTAAATTCAGGTTAAATCTTGGAACTGGTGCCTaGACAGCAACCTCTGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GFLGSVINAVQVLKFRLNLGTGA*TATSGF Trigger: GAAGCCAGAGGTTGCTGTCAAGGCACCAGTTCCAAG...ATTTAACCTGAATTTAAGGACTTGGACTGCATTAATGACACTCCCTAGGAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR TCA 72 bp | TTGGCCACCTTTTCTGCATGCAACTTTCTTTGCTCATaGGGAAGCGTCGCAGCCTTGTCTTTCATTTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LATFSACNFLCS*GSVAALSFISF Trigger: AAAAGAAATGAAAGACAAGGCTGCGACGCTTCCTCATGAGCAAAGAAAGTTGCATGCAGAAAAGGTGGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| 3UTR GCA 72 bp | TTCACCTCTGTTTCTTATAGAGACACACCTGGCTTTTaGTGCTTTGTGGCAGGAACTCAGACACTGAACTTA | + |
|
Preference number: 3 (lower is better) Translates to: FTSVSYRDTPGF*CFVAGTQTLNL Trigger: TAAGTTCAGTGTCTGAGTTCCTGCCACAAAGCAGCAAAAGCCAGGTGTGTCTCTATAAGAAACAGAGGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | CCCACCAACACTGTTATCTTTATAAAGCACAGATCCTaGACATCAGTGAGCTCACACCTCCGTAGCATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PTNTVIFIKHRS*TSVSSHLRSIK Trigger: TTTAATGCTACGGAGGTGTGAGCTCACTGATGTCCAGGATCTGTGCTTTATAAAGATAACAGTGTTGGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CCA 72 bp | AGCTTCCCCAAATCTTTAGTTTCTCTAGATCAGATGTaGCCAAGTTCTATAAATAGAGAGCAAGCCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SFPKSLVSLDQM*PSSINREQASW Trigger: CCAGCTGGCTTGCTCTCTATTTATAGAACTTGGCCACATCTGATCTAGAGAAACTAAAGATTTGGGGAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR TCA 72 bp | AGCACCAGCTCAGGAATATATAGGCAAAGTAGATTCTaGAACATTACAGGCAACAAACTCTTCGGACTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: STSSGIYRQSRF*NITGNKLFGLY Trigger: ATACAGTCCGAAGAGTTTGTTGCCTGTAATGTTTCAGAATCTACTTTGCCTATATATTCCTGAGCTGGTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR CCA 90 bp | ACCCAGGAACCCGGAGCAAAGCAGCACCCACTGTTTCTAGAATACCACCATCACTGTCCTCTCAGCTGTTaGCGACGGCTCCTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQEPGAKQHPLFLEYHHHCPLSC*RRLLLL Trigger: GAGCAGCAGGAGCCGTCGCCAACAGCTGAGAGGACA...GTGATGGTGGTATTCTAGAAACAGTGGGTGCTGCTTTGCTCCGGGTTCCTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR TCA 90 bp | ACTGCCCAGGTACACAAAGGGGATGTCAACTTCCAGTCTGAGCAGCCCACGAGCTACAAACGCCTGGACTaGCTCGGCAATCTCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TAQVHKGDVNFQSEQPTSYKRLD*LGNLSS Trigger: ACTGCTGAGATTGCCGAGTCAGTCCAGGCGTTTGTA...GCTCGTGGGCTGCTCAGACTGGAAGTTGACATCCCCTTTGTGTACCTGGGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CAA 72 bp | ATACCACCATCACCAGGATCATGCCTCCTCCCTGGGTaGGTTCTGGCCTGGCTAAGCATGTTTCAGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPPSPGSCLLPG*VLAWLSMFQVL Trigger: CAGGACCTGAAACATGCTTAGCCAGGCCAGAACCAACCCAGGGAGGAGGCATGATCCTGGTGATGGTGGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR TCA 90 bp | AGAATGAACGGGGCAATCGAGCACAGCAGCAGAACTCCCCATGGAGCCCAGGCTACTCAAAGCCATGTTTaGTGCACCACTCTTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RMNGAIEHSSRTPHGAQATQSHV*CTTLEP Trigger: AGGCTCAAGAGTGGTGCATCAAACATGGCTTTGAGT...AGCCTGGGCTCCATGGGGAGTTCTGCTGCTGTGCTCGATTGCCCCGTTCATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR GCA 90 bp | GAAGTGAACCATGATGGTGGCTCAGGACCTGGCTGTCGGGAGGCTCACCTATCCAGCATCGCTGGAAGTTaGTTCCACAACAGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EVNHDGGSGPGCREAHLSSIAGS*FHNSIF Trigger: GAAGATGCTGTTGTGGAAGCAACTTCCAGCGATGCT...GGATAGGTGAGCCTCCCGACAGCCAGGTCCTGAGCCACCATCATGGTTCACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR TCA 90 bp | GGTTTCCTAGGGAGTGTCATTAATGCAGTCCAAGTCCTTAAATTCAGGTTAAATCCAGCCGGTCCCCGGTaGAGGTGGCGGAGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFLGSVINAVQVLKFRLNPAGPR*RWRSSW Trigger: CCAGCTGCTCCGCCACCTTCACCGGGGACCGGCTGG...ATTTAACCTGAATTTAAGGACTTGGACTGCATTAATGACACTCCCTAGGAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR TCA 90 bp | ACTGCCCAGGTACACAAAGGGGATGTCAACTTCCAGTCTGAGCAGCCCACGAGCGACGCTGTCAAGACCTaGTTTCTGTGTGCTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TAQVHKGDVNFQSEQPTSDAVKT*FLCAVK Trigger: TTTGACAGCACACAGAAATCAGGTCTTGACAGCGTC...GCTCGTGGGCTGCTCAGACTGGAAGTTGACATCCCCTTTGTGTACCTGGGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR TCA 90 bp | TCCCCTAGGCACATCCTACATCTACAGCTGCCTTTCTTGTCACCAGCATTCACCTCCTGCTGCTCAGAGTaGCAGCTCTCTGCTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPRHILHLQLPFLSPAFTSCCSE*QLSADA Trigger: TGCATCAGCAGAGAGCTGTCACTCTGAGCAGCAGGA...GGTGAATGCTGGTGACAAGAAAGGCAGCTGTAGATGTAGGATGTGCCTAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR TCA 90 bp | GTCACAGGTCATGAGGCTGGTTCAGCCTTAGCAGGGTTCAAAGTCAAGTTGAAGCGGCAATCTCAGCAGTaGCCAGGAACTTGCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTGHEAGSALAGFKVKLKRQSQQ*PGTCLA Trigger: TGCCAAGCAAGTTCCTGGTCACTGCTGAGATTGCCG...CTTCAACTTGACTTTGAACCCTGCTAAGGCTGAACCAGCCTCATGACCTGTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR CCA 90 bp | GAAGTGAACCATGATGGTGGCTCAGGACCTGGCTGTCGGGAGGCTCACCTATCCTCTTCATCACGACATTaGACCAGACATTGGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVNHDGGSGPGCREAHLSSSSRH*TRHWHS Trigger: TGAATGCCAATGTCTGGTCCAATGTCGTGATGAAGA...GGATAGGTGAGCCTCCCGACAGCCAGGTCCTGAGCCACCATCATGGTTCACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR TCA 90 bp | TCCCCTAGGCACATCCTACATCTACAGCTGCCTTTCTTGTCACCAGCATTCACCAACTTTCTTTGCTCATaGGGAAGCGTCGCAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPRHILHLQLPFLSPAFTNFLCS*GSVAAL Trigger: CAAGGCTGCGACGCTTCCTCATGAGCAAAGAAAGTT...GGTGAATGCTGGTGACAAGAAAGGCAGCTGTAGATGTAGGATGTGCCTAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR GCA 90 bp | GAAGTGAACCATGATGGTGGCTCAGGACCTGGCTGTCGGGAGGCTCACCTATCCGACCTGATTTCTGTGTaGTGTCAAAGTAAACTACAA | + |
|
Preference number: 4 (lower is better) Translates to: EVNHDGGSGPGCREAHLSDLISV*CQSKLQ Trigger: TTGTAGTTTACTTTGACAGCACACAGAAATCAGGTC...GGATAGGTGAGCCTCCCGACAGCCAGGTCCTGAGCCACCATCATGGTTCACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR CCA 90 bp | ACGGTGCTGGCACTGGAGTCAGTCAAACCTAGCAGGAAGAGCTTAGTGCTCGTCTCTTCATCACGACATTaGACCAGACATTGGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVLALESVKPSRKSLVLVSSSRH*TRHWHS Trigger: TGAATGCCAATGTCTGGTCCAATGTCGTGATGAAGA...GACGAGCACTAAGCTCTTCCTGCTAGGTTTGACTGACTCCAGTGCCAGCACCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| 3UTR CAA 72 bp | TGGTGTAAGCTGGTGGTAACTTTCTTCCCATTCTGCTaGGCCTTCTGTCACGTGACCTTGTCTTGCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WCKLVVTFFPFC*AFCHVTLSCLP Trigger: AGGCAAGCAAGACAAGGTCACGTGACAGAAGGCCAAGCAGAATGGGAAGAAAGTTACCACCAGCTTACACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CAA 72 bp | GAAGGCTTTGGCCACCTTTTCTGCATGCAACTTTCTTaGCTCATGAGGAAGCGTCGCAGCCTTGTCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGFGHLFCMQLS*LMRKRRSLVFH Trigger: ATGAAAGACAAGGCTGCGACGCTTCCTCATGAGCAAAGAAAGTTGCATGCAGAAAAGGTGGCCAAAGCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| CDS-3UTR TCA 90 bp | GTCACAGGTCATGAGGCTGGTTCAGCCTTAGCAGGGTTCAAAGTCAAGTTGAAGTTGATGCACCACTCTTaGGCCTGTTGTCGGTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: VTGHEAGSALAGFKVKLKLMHHS*ACCRFI Trigger: AATAAACCGACAACAGGCTCAAGAGTGGTGCATCAA...CTTCAACTTGACTTTGAACCCTGCTAAGGCTGAACCAGCCTCATGACCTGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR TCA 90 bp | GAAGGCTTTGGCCACCTTTTCTGCATGCAACTTTCTTTGCTCATGAGGAAGCGTACTCAAAGCCATGTTTaGTGCACCACTCTTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGFGHLFCMQLSLLMRKRTQSHV*CTTLEP Trigger: AGGCTCAAGAGTGGTGCATCAAACATGGCTTTGAGT...ACGCTTCCTCATGAGCAAAGAAAGTTGCATGCAGAAAAGGTGGCCAAAGCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAAGGCCCTCGATCTCATCTCGGTCCCCTCCTATTGCCATCCAGAAGGCTTCATTGGACCAGACATTaGCATTCAATGCTTGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: KKGPRSHLGPLLLPSRRLHWTRH*HSMLVQ Trigger: TTGTACAAGCATTGAATGCCAATGTCTGGTCCAATG...AAGCCTTCTGGATGGCAATAGGAGGGGACCGAGATGAGATCGAGGGCCTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| CDS-3UTR GCA 90 bp | CAACTTTATCAGATATGGGGTAGGGCCTGTTCTGAGTTGGGCTCGCATTTGGAATTTGGCCACCTTTTCTaGATGCAACTTTCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QLYQIWGRACSELGSHLEFGHLF*MQLSLL Trigger: GAGCAAAGAAAGTTGCATGCAGAAAAGGTGGCCAAA...TTCCAAATGCGAGCCCAACTCAGAACAGGCCCTACCCCATATCTGATAAAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CAA 72 bp | GAGGCTGGTTCAGCCTTAGCAGGGTTCAAAGTCAAGTaGAAGCAACTGAACTTTGCTAATGATGAGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAGSALAGFKVK*KQLNFANDECL Trigger: CAGACACTCATCATTAGCAAAGTTCAGTTGCTTCAACTTGACTTTGAACCCTGCTAAGGCTGAACCAGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR CCA 90 bp | CAACTTTATCAGATATGGGGTAGGGCCTGTTCTGAGTTGGGCTCGCATTTGGAACATTGGACCAGACATTaGCATTCAATGCTTGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: QLYQIWGRACSELGSHLEHWTRH*HSMLVQ Trigger: TTGTACAAGCATTGAATGCCAATGTCTGGTCCAATG...TTCCAAATGCGAGCCCAACTCAGAACAGGCCCTACCCCATATCTGATAAAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| 3UTR CAA 72 bp | TCCCGCTCCCCATACACACATGTACACCAAGCAAGTTaGTATGCCAAAGATAGTCATAATTTTAAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRSPYTHVHQAS*YAKDSHNFKAR Trigger: CCTGGCCTTAAAATTATGACTATCTTTGGCATACAAACTTGCTTGGTGTACATGTGTGTATGGGGAGCGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR GCA 90 bp | CTAGTTCTTGAATATCCAGGTCTAACATGGGGTCGACAATGCTGTCAACCTGTGGACATTGGCATTCAATaGTTGTACAATCCGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LVLEYPGLTWGRQCCQPVDIGIQ*LYNPLY Trigger: GTAAAGCGGATTGTACAAGCATTGAATGCCAATGTC...CACAGGTTGACAGCATTGTCGACCCCATGTTAGACCTGGATATTCAAGAACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTCCTAGGGAGTGTCATTAATGCAGTCCAAGTCCTTAAATTCAGGTTAAATGACATTGGCATTCAATaGTTGTACAATCCGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GFLGSVINAVQVLKFRLNDIGIQ*LYNPLY Trigger: GTAAAGCGGATTGTACAAGCATTGAATGCCAATGTC...ATTTAACCTGAATTTAAGGACTTGGACTGCATTAATGACACTCCCTAGGAAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS GCA 90 bp | CTGGAAGTTGCTTCCACAACAGCATCTTCTGTCCCAAGGATATGTTaGACCAGCCGGTCCCCGGTGAAGGTGGCGGAGCAGCTGGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: LEVASTTASSVPRIC*TSRSPVKVAEQLVT Trigger: GGTTACCAGCTGCTCCGCCACCTTCACCGGGGACCGGCTGGTGCAACATATCCTTGGGACAGAAGATGCTGTTGTGGAAGCAACTTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR CAA 90 bp | AGAATGAACGGGGCAATCGAGCACAGCAGCAGAACTCCCCATGGAGCCCAGGCTCAGCATCGCTGGAAGTaGCTTCCACAACAGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RMNGAIEHSSRTPHGAQAQHRWK*LPQQHL Trigger: AAGATGCTGTTGTGGAAGCAACTTCCAGCGATGCTG...AGCCTGGGCTCCATGGGGAGTTCTGCTGCTGTGCTCGATTGCCCCGTTCATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR CAA 90 bp | CCAAGAGTCACAGGTCATGAGGCTGGTTCAGCCTTAGCAGGGTTCAAAGTCAAGCTCGGTCCCCTCCTATaGCCATCCAGAAGGCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PRVTGHEAGSALAGFKVKLGPLL*PSRRLW Trigger: CCAAAGCCTTCTGGATGGCAATAGGAGGGGACCGAG...CTTGACTTTGAACCCTGCTAAGGCTGAACCAGCCTCATGACCTGTGACTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS CCA 90 bp | ACCTGTAGATTCAGGGAAGTCATCGTCCTCCTCGGGCAGCTCCTCTaGGTTGAGTTCCACCAACTCAAAGCCATGTTTGATGCACCACTC | + |
|
Preference number: 5 (lower is better) Translates to: TCRFREVIVLLGQLL*VEFHQLKAMFDAPL Trigger: GAGTGGTGCATCAAACATGGCTTTGAGTTGGTGGAACTCAACCCAGAGGAGCTGCCCGAGGAGGACGATGACTTCCCTGAATCTACAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041551.9 ENSMUST00000213880.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGGCAGAAGAGAACCCCGTTGAGAAGGGAAGCACTTGGGGAGCACGGTGCTCTCTTCATCACGACATaGGACCAGACATTGGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SWQKRTPLRREALGEHGALFITT*DQTLAF Trigger: GAATGCCAATGTCTGGTCCAATGTCGTGATGAAGAG...AGCACCGTGCTCCCCAAGTGCTTCCCTTCTCAACGGGGTTCTCTTCTGCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS GCA 90 bp | CCAGAGGGAGCCACGAGGAGACGCTGTCAAGACCTGATTTCTGTGTaGTGTCAAAGTAAACTACAAACGCCTGGACTGACTCGGCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: PEGATRRRCQDLISV*CQSKLQTPGLTRQS Trigger: AGATTGCCGAGTCAGTCCAGGCGTTTGTAGTTTACTTTGACAGCACACAGAAATCAGGTCTTGACAGCGTCTCCTCGTGGCTCCCTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR CAA 90 bp | ACTGCCCAGGTACACAAAGGGGATGTCAACTTCCAGTCTGAGCAGCCCACGAGCTTTGATGCACCACTCTaGAGCCTGTTGTCGGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: TAQVHKGDVNFQSEQPTSFDAPL*SLLSVY Trigger: ATAAACCGACAACAGGCTCAAGAGTGGTGCATCAAA...GCTCGTGGGCTGCTCAGACTGGAAGTTGACATCCCCTTTGTGTACCTGGGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR CAA 90 bp | GAAGTGAACCATGATGGTGGCTCAGGACCTGGCTGTCGGGAGGCTCACCTATCCACATTGGACCAGACATaGGCATTCAATGCTTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: EVNHDGGSGPGCREAHLSTLDQT*AFNACT Trigger: TGTACAAGCATTGAATGCCAATGTCTGGTCCAATGT...GGATAGGTGAGCCTCCCGACAGCCAGGTCCTGAGCCACCATCATGGTTCACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGCAGCACTTCACTGCCCAGGTACACAAAGGGGATGTCAACTTCCAGTCTGCATGCAACTTTCTTaGCTCATGAGGAAGCGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SVAALHCPGTQRGCQLPVCMQLS*LMRKRR Trigger: GCGACGCTTCCTCATGAGCAAAGAAAGTTGCATGCA...GACTGGAAGTTGACATCCCCTTTGTGTACCTGGGCAGTGAAGTGCTGCCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS GCA 90 bp | AGCAGTGACCAGGAACTTGCTTGGCACCACGCACAGGTTGATCTCTaGGGAATAGTACTTGTTATCGATGGTCCAGGGGTAAAACCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSDQELAWHHAQVDL*GIVLVIDGPGVKPH Trigger: GTGAGGTTTTACCCCTGGACCATCGATAACAAGTACTATTCCGCAGAGATCAACCTGTGCGTGGTGCCAAGCAAGTTCCTGGTCACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS GCA 90 bp | GTTATCGATGGTCCAGGGGTAAAACCTCACAGCATCGCTGGAAGTTaGTTCCACAACAGCATCTTCTGTCCCAAGGATATGTTGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: VIDGPGVKPHSIAGS*FHNSIFCPKDMLHQ Trigger: CTGGTGCAACATATCCTTGGGACAGAAGATGCTGTTGTGGAAGCAACTTCCAGCGATGCTGTGAGGTTTTACCCCTGGACCATCGATAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR CAA 90 bp | ACGGTGCTGGCACTGGAGTCAGTCAAACCTAGCAGGAAGAGCTTAGTGCTCGTCATTGGCATTCAATGCTaGTACAATCCGCTTTACACC | + |
|
Preference number: 5 (lower is better) Translates to: TVLALESVKPSRKSLVLVIGIQC*YNPLYT Trigger: GGTGTAAAGCGGATTGTACAAGCATTGAATGCCAAT...GACGAGCACTAAGCTCTTCCTGCTAGGTTTGACTGACTCCAGTGCCAGCACCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| CDS-3UTR CAA 90 bp | CATTTTACCCAGGTTCTTAAAACGAAGACTGTAGATCTGAAGGGTTTCCACACTGCCCCAGCCAGTGAGTaGAGAAGGCTGAAGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HFTQVLKTKTVDLKGFHTAPASE*RRLKPW Trigger: CCAGGGCTTCAGCCTTCTCAACTCACTGGCTGGGGC...AGTGTGGAAACCCTTCAGATCTACAGTCTTCGTTTTAAGAACCTGGGTAAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGCAGCACTTCACTGCCCAGGTACACAAAGGGGATGTCAACTTCCAGTCGGAAGCGTCGCAGCCTaGTCTTTCATTTCTTTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SVAALHCPGTQRGCQLPVGSVAA*SFISFN Trigger: GTTAAAAGAAATGAAAGACAAGGCTGCGACGCTTCC...GACTGGAAGTTGACATCCCCTTTGTGTACCTGGGCAGTGAAGTGCTGCCACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS TCA 90 bp | GGGTTGAGTTCCACCAACTCAAAGCCATGTTTGATGCACCACTCTTaGGCCTGTTGTCGGTTTATTCCATCGTCACACACTCTATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GLSSTNSKPCLMHHS*ACCRFIPSSHTLSQ Trigger: CTGTGATAGAGTGTGTGACGATGGAATAAACCGACAACAGGCTCAAGAGTGGTGCATCAAACATGGCTTTGAGTTGGTGGAACTCAACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041551.9 ENSMUST00000213880.2 |
||
| CDS-3UTR CAA 90 bp | ACCCAGGTTCTTAAAACGAAGACTGTAGATCTGAAGGGTTTCCACACTGTCATTGCCATCCAGAAGGCTTaGGCCACCTTTTCTGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: TQVLKTKTVDLKGFHTVIAIQKA*ATFSAC Trigger: GCATGCAGAAAAGGTGGCCAAAGCCTTCTGGATGGC...AATGACAGTGTGGAAACCCTTCAGATCTACAGTCTTCGTTTTAAGAACCTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS CCA 90 bp | AGTACTTGTTATCGATGGTCCAGGGGTAAAACCTCACAGCATCGCTaGAAGTTGCTTCCACAACAGCATCTTCTGTCCCAAGGATATGTT | + |
|
Preference number: 5 (lower is better) Translates to: STCYRWSRGKTSQHR*KLLPQQHLLSQGYV Trigger: AACATATCCTTGGGACAGAAGATGCTGTTGTGGAAGCAACTTCCAGCGATGCTGTGAGGTTTTACCCCTGGACCATCGATAACAAGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS-3UTR CAA 90 bp | GAAGGCTTTGGCCACCTTTTCTGCATGCAACTTTCTTTGCTCATGAGGAAGCGTTTTGATGCACCACTCTaGAGCCTGTTGTCGGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: EGFGHLFCMQLSLLMRKRFDAPL*SLLSVY Trigger: ATAAACCGACAACAGGCTCAAGAGTGGTGCATCAAA...ACGCTTCCTCATGAGCAAAGAAAGTTGCATGCAGAAAAGGTGGCCAAAGCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| CDS-3UTR CAA 90 bp | CTAGTTCTTGAATATCCAGGTCTAACATGGGGTCGACAATGCTGTCAACCTGTGCTCTTCATCACGACATaGGACCAGACATTGGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LVLEYPGLTWGRQCCQPVLFITT*DQTLAF Trigger: GAATGCCAATGTCTGGTCCAATGTCGTGATGAAGAG...CACAGGTTGACAGCATTGTCGACCCCATGTTAGACCTGGATATTCAAGAACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| CDS GCA 90 bp | CCTGTCACTCTTCATCACGACATTGGACCAGACATTGGCATTCAATaGTTGTACAATCCGCTTTACACCTGTAGATTCAGGGAAGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: PVTLHHDIGPDIGIQ*LYNPLYTCRFREVI Trigger: GATGACTTCCCTGAATCTACAGGTGTAAAGCGGATTGTACAAGCATTGAATGCCAATGTCTGGTCCAATGTCGTGATGAAGAGTGACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS GCA 90 bp | TGCTGCACTCTTCATCACGACATTGGACCAGACATTGGCATTCAATaGTTGTACAATCCGCTTTACACCTGTAGATTCAGGGAAGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: CCTLHHDIGPDIGIQ*LYNPLYTCRFREVI Trigger: GATGACTTCCCTGAATCTACAGGTGTAAAGCGGATTGTACAAGCATTGAATGCCAATGTCTGGTCCAATGTCGTGATGAAGAGTGCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| CDS-3UTR CAA 90 bp | ATGCAACTTTCTTTGCTCATGAGGAAGCGTCGCAGCCTTGTCTTTCATTTCTTTACATTGGACCAGACATaGGCATTCAATGCTTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: MQLSLLMRKRRSLVFHFFTLDQT*AFNACT Trigger: TGTACAAGCATTGAATGCCAATGTCTGGTCCAATGT...AAAGAAATGAAAGACAAGGCTGCGACGCTTCCTCATGAGCAAAGAAAGTTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
||
| CDS-3UTR CAA 90 bp | CATTTTACCCAGGTTCTTAAAACGAAGACTGTAGATCTGAAGGGTTTCCACACTATTGGCATTCAATGCTaGTACAATCCGCTTTACACC | + |
|
Preference number: 5 (lower is better) Translates to: HFTQVLKTKTVDLKGFHTIGIQC*YNPLYT Trigger: GGTGTAAAGCGGATTGTACAAGCATTGAATGCCAAT...AGTGTGGAAACCCTTCAGATCTACAGTCTTCGTTTTAAGAACCTGGGTAAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS CAA 90 bp | ACGCACCACTGTGATGGCCAGGGAGGGACTCTGTCCTCTCAGCTGTaGGCGACGGCTCCTGCTGCTCAGAGTGACAGCTCTCTGCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: THHCDGQGGTLSSQL*ATAPAAQSDSSLLM Trigger: CATCAGCAGAGAGCTGTCACTCTGAGCAGCAGGAGCCGTCGCCAACAGCTGAGAGGACAGAGTCCCTCCCTGGCCATCACAGTGGTGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS TCA 72 bp | CTCTCAGCTGTTGGCGACGGCTCCTGCTGCTCAGAGTaGCAGCTCTCTGCTGATGCAACTCTGCGGTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSAVGDGSCCSE*QLSADATLRFA Trigger: GGCAAACCGCAGAGTTGCATCAGCAGAGAGCTGTCACTCTGAGCAGCAGGAGCCGTCGCCAACAGCTGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS GCA 72 bp | GCTTCCACAACAGCATCTTCTGTCCCAAGGATATGTTaGACCAGCCGGTCCCCGGTGAAGGTGGCGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ASTTASSVPRIC*TSRSPVKVAEQ Trigger: CTGCTCCGCCACCTTCACCGGGGACCGGCTGGTGCAACATATCCTTGGGACAGAAGATGCTGTTGTGGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS CAA 90 bp | GCTGGAAGTTGCTTCCACAACAGCATCTTCTGTCCCAAGGATATGTaGCACCAGCCGGTCCCCGGTGAAGGTGGCGGAGCAGCTGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: AGSCFHNSIFCPKDM*HQPVPGEGGGAAGN Trigger: GTTACCAGCTGCTCCGCCACCTTCACCGGGGACCGGCTGGTGCAACATATCCTTGGGACAGAAGATGCTGTTGTGGAAGCAACTTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS CAA 72 bp | TGCTTCCACAACAGCATCTTCTGTCCCAAGGATATGTaGCACCAGCCGGTCCCCGGTGAAGGTGGCGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CFHNSIFCPKDM*HQPVPGEGGGA Trigger: TGCTCCGCCACCTTCACCGGGGACCGGCTGGTGCAACATATCCTTGGGACAGAAGATGCTGTTGTGGAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS CCA 72 bp | TTTGCCCCAGCCAGTGAGTTGAGAAGGCTGAAGCCCTaGCTCCTGTCACTCTTCATCACGACATTGGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: FAPASELRRLKP*LLSLFITTLDQ Trigger: CTGGTCCAATGTCGTGATGAAGAGTGACAGGAGCCAGGGCTTCAGCCTTCTCAACTCACTGGCTGGGGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS CAA 72 bp | TGGACTGACTCGGCAATCTCAGCAGTGACCAGGAACTaGCTTGGCACCACGCACAGGTTGATCTCTGCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: WTDSAISAVTRN*LGTTHRLISAE Trigger: TTCCGCAGAGATCAACCTGTGCGTGGTGCCAAGCAAGTTCCTGGTCACTGCTGAGATTGCCGAGTCAGTCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS GCA 72 bp | CAGGAACTTGCTTGGCACCACGCACAGGTTGATCTCTaGGGAATAGTACTTGTTATCGATGGTCCAGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: QELAWHHAQVDL*GIVLVIDGPGV Trigger: TACCCCTGGACCATCGATAACAAGTACTATTCCGCAGAGATCAACCTGTGCGTGGTGCCAAGCAAGTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS CCA 72 bp | TATCGATGGTCCAGGGGTAAAACCTCACAGCATCGCTaGAAGTTGCTTCCACAACAGCATCTTCTGTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: YRWSRGKTSQHR*KLLPQQHLLSQ Trigger: TTGGGACAGAAGATGCTGTTGTGGAAGCAACTTCCAGCGATGCTGTGAGGTTTTACCCCTGGACCATCGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS CAA 90 bp | TGTTATCGATGGTCCAGGGGTAAAACCTCACAGCATCGCTGGAAGTaGCTTCCACAACAGCATCTTCTGTCCCAAGGATATGTTGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: CYRWSRGKTSQHRWK*LPQQHLLSQGYVAP Trigger: TGGTGCAACATATCCTTGGGACAGAAGATGCTGTTGTGGAAGCAACTTCCAGCGATGCTGTGAGGTTTTACCCCTGGACCATCGATAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS CAA 72 bp | CTGAAGCCCTGGCTCCTGTCACTCTTCATCACGACATaGGACCAGACATTGGCATTCAATGCTTGTACAATC | + |
|
Preference number: 6 (lower is better) Translates to: LKPWLLSLFITT*DQTLAFNACTI Trigger: GATTGTACAAGCATTGAATGCCAATGTCTGGTCCAATGTCGTGATGAAGAGTGACAGGAGCCAGGGCTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS CAA 90 bp | TTGAGAAGGCTGAAGCCCTGGCTCCTGTCACTCTTCATCACGACATaGGACCAGACATTGGCATTCAATGCTTGTACAATCCGCTTTACA | + |
|
Preference number: 6 (lower is better) Translates to: LRRLKPWLLSLFITT*DQTLAFNACTIRFT Trigger: TGTAAAGCGGATTGTACAAGCATTGAATGCCAATGTCTGGTCCAATGTCGTGATGAAGAGTGACAGGAGCCAGGGCTTCAGCCTTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS CAA 90 bp | TTCCACCAACTCAAAGCCATGTTTGATGCACCACTCTTGAGCCTGTaGTCGGTTTATTCCATCGTCACACACTCTATCACAGACCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: FHQLKAMFDAPLLSL*SVYSIVTHSITDQD Trigger: ATCCTGGTCTGTGATAGAGTGTGTGACGATGGAATAAACCGACAACAGGCTCAAGAGTGGTGCATCAAACATGGCTTTGAGTTGGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041551.9 ENSMUST00000213880.2 |
||
| CDS CAA 90 bp | TGGGTTGAGTTCCACCAACTCAAAGCCATGTTTGATGCACCACTCTaGAGCCTGTTGTCGGTTTATTCCATCGTCACACACTCTATCACA | + |
|
Preference number: 6 (lower is better) Translates to: WVEFHQLKAMFDAPL*SLLSVYSIVTHSIT Trigger: TGTGATAGAGTGTGTGACGATGGAATAAACCGACAACAGGCTCAAGAGTGGTGCATCAAACATGGCTTTGAGTTGGTGGAACTCAACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041551.9 ENSMUST00000213880.2 |
||
| CDS CAA 90 bp | AAGCCCTGGCTCCTGTCACTCTTCATCACGACATTGGACCAGACATaGGCATTCAATGCTTGTACAATCCGCTTTACACCTGTAGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: KPWLLSLFITTLDQT*AFNACTIRFTPVDS Trigger: TGAATCTACAGGTGTAAAGCGGATTGTACAAGCATTGAATGCCAATGTCTGGTCCAATGTCGTGATGAAGAGTGACAGGAGCCAGGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
||
| CDS TCA 72 bp | TCCACCAACTCAAAGCCATGTTTGATGCACCACTCTTaGGCCTGTTGTCGGTTTATTCCATCGTCACACACT | + |
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Preference number: 6 (lower is better) Translates to: STNSKPCLMHHS*ACCRFIPSSHT Trigger: AGTGTGTGACGATGGAATAAACCGACAACAGGCTCAAGAGTGGTGCATCAAACATGGCTTTGAGTTGGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041551.9 ENSMUST00000213880.2 |
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| CDS CCA 72 bp | CTGCTGCACTCTTCATCACGACATTGGACCAGACATTaGCATTCAATGCTTGTACAATCCGCTTTACACCTG | + |
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Preference number: 6 (lower is better) Translates to: LLHSSSRHWTRH*HSMLVQSALHL Trigger: CAGGTGTAAAGCGGATTGTACAAGCATTGAATGCCAATGTCTGGTCCAATGTCGTGATGAAGAGTGCAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
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| CDS CAA 72 bp | TTCCACCAACTCAAAGCCATGTTTGATGCACCACTCTaGAGCCTGTTGTCGGTTTATTCCATCGTCACACAC | + |
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Preference number: 6 (lower is better) Translates to: FHQLKAMFDAPL*SLLSVYSIVTH Trigger: GTGTGTGACGATGGAATAAACCGACAACAGGCTCAAGAGTGGTGCATCAAACATGGCTTTGAGTTGGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041551.9 ENSMUST00000213880.2 |
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| CDS CAA 72 bp | CCTGCTGCACTCTTCATCACGACATTGGACCAGACATaGGCATTCAATGCTTGTACAATCCGCTTTACACCT | + |
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Preference number: 6 (lower is better) Translates to: PAALFITTLDQT*AFNACTIRFTP Trigger: AGGTGTAAAGCGGATTGTACAAGCATTGAATGCCAATGTCTGGTCCAATGTCGTGATGAAGAGTGCAGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
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| CDS CAA 90 bp | GTCACTCTTCATCACGACATTGGACCAGACATTGGCATTCAATGCTaGTACAATCCGCTTTACACCTGTAGATTCAGGGAAGTCATCGTC | + |
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Preference number: 6 (lower is better) Translates to: VTLHHDIGPDIGIQC*YNPLYTCRFREVIV Trigger: GACGATGACTTCCCTGAATCTACAGGTGTAAAGCGGATTGTACAAGCATTGAATGCCAATGTCTGGTCCAATGTCGTGATGAAGAGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| CDS CAA 90 bp | TGCACTCTTCATCACGACATTGGACCAGACATTGGCATTCAATGCTaGTACAATCCGCTTTACACCTGTAGATTCAGGGAAGTCATCGTC | + |
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Preference number: 6 (lower is better) Translates to: CTLHHDIGPDIGIQC*YNPLYTCRFREVIV Trigger: GACGATGACTTCCCTGAATCTACAGGTGTAAAGCGGATTGTACAAGCATTGAATGCCAATGTCTGGTCCAATGTCGTGATGAAGAGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213880.2 |
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| CDS CCA 72 bp | TCCTGTCACTCTTCATCACGACATTGGACCAGACATTaGCATTCAATGCTTGTACAATCCGCTTTACACCTG | + |
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Preference number: 6 (lower is better) Translates to: SCHSSSRHWTRH*HSMLVQSALHL Trigger: CAGGTGTAAAGCGGATTGTACAAGCATTGAATGCCAATGTCTGGTCCAATGTCGTGATGAAGAGTGACAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| CDS CAA 72 bp | CTCAAAGCCATGTTTGATGCACCACTCTTGAGCCTGTaGTCGGTTTATTCCATCGTCACACACTCTATCACA | + |
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Preference number: 6 (lower is better) Translates to: LKAMFDAPLLSL*SVYSIVTHSIT Trigger: TGTGATAGAGTGTGTGACGATGGAATAAACCGACAACAGGCTCAAGAGTGGTGCATCAAACATGGCTTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041551.9 ENSMUST00000213880.2 |
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| CDS CAA 72 bp | CTCCTGTCACTCTTCATCACGACATTGGACCAGACATaGGCATTCAATGCTTGTACAATCCGCTTTACACCT | + |
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Preference number: 6 (lower is better) Translates to: LLSLFITTLDQT*AFNACTIRFTP Trigger: AGGTGTAAAGCGGATTGTACAAGCATTGAATGCCAATGTCTGGTCCAATGTCGTGATGAAGAGTGACAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041551.9 |
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| CDS GCA 72 bp | CTTCATCACGACATTGGACCAGACATTGGCATTCAATaGTTGTACAATCCGCTTTACACCTGTAGATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LHHDIGPDIGIQ*LYNPLYTCRFR Trigger: CCTGAATCTACAGGTGTAAAGCGGATTGTACAAGCATTGAATGCCAATGTCTGGTCCAATGTCGTGATGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041551.9 ENSMUST00000213880.2 |
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| CDS CAA 72 bp | CATCACGACATTGGACCAGACATTGGCATTCAATGCTaGTACAATCCGCTTTACACCTGTAGATTCAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: HHDIGPDIGIQC*YNPLYTCRFRE Trigger: TTCCCTGAATCTACAGGTGTAAAGCGGATTGTACAAGCATTGAATGCCAATGTCTGGTCCAATGTCGTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041551.9 ENSMUST00000213880.2 |
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