RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AADACL4FM5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078504

Ensembl transcript IDs: ENSMUST00000105746.3

Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACACACTGTATTTGTGGTATAAGAGAGAACACAAATTTGACTTATTaGGCAGAGTTCTCTGCTTCCACATCTAATTCCAACATGCGTCAT +
Preference number: 1 (lower is better)
Translates to: THCICGIRENTNLTY*AEFSASTSNSNMRH
Trigger: ATGACGCATGTTGGAATTAGATGTGGAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAAATACAGTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
3UTR-3UTR TCA 90 bp TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCTGCATAGGTATTCCTTaGCTCACTCCACTGAAACCC +
Preference number: 2 (lower is better)
Translates to: LWYKREHKFDLLSRVLCFCIGIP*LTPLKP
Trigger: GGGTTTCAGTGGAGTGAGTCAAGGAATACCTATGCA...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR GCA 90 bp TCTTCAGTCCTCTTGCTAAAATACATACCTGAGCAAAGGACTGAGTACATGCATCATGGGCCAGGAAGCTaGCCAGGCCATGGTAAGTAT +
Preference number: 4 (lower is better)
Translates to: SSVLLLKYIPEQRTEYMHHGPGS*PGHGKY
Trigger: ATACTTACCATGGCCTGGGCAGCTTCCTGGCCCATG...ATGCATGTACTCAGTCCTTTGCTCAGGTATGTATTTTAGCAAGAGGACTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR CCA 90 bp TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCCTCACAGGGATCCCCTaGTCTTCCAAGCGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LWYKREHKFDLLSRVLCFLTGIP*SSKRLL
Trigger: CAAGAGGCGCTTGGAAGACCAGGGGATCCCTGTGAG...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR CCA 90 bp TCTTCAGTCCTCTTGCTAAAATACATACCTGAGCAAAGGACTGAGTACATGCATCCCCCAGGAAGAATGTaGATACTCCTGCTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SSVLLLKYIPEQRTEYMHPPGRM*ILLLEA
Trigger: TGCTTCTAGCAGGAGTATCCACATTCTTCCTGGGGG...ATGCATGTACTCAGTCCTTTGCTCAGGTATGTATTTTAGCAAGAGGACTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR CCA 90 bp TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCAATGAGTCTGTCTCATaGGCCAGGAAGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LWYKREHKFDLLSRVLCFNESVS*ARKLPR
Trigger: CCTGGGCAGCTTCCTGGCCCATGAGACAGACTCATT...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR CCA 90 bp TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCAAGCCATCCTCCGCATaGTACCAGCTCACAGGGATC +
Preference number: 4 (lower is better)
Translates to: LWYKREHKFDLLSRVLCFKPSSA*YQLTGI
Trigger: GATCCCTGTGAGCTGGTACCATGCGGAGGATGGCTT...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR TCA 90 bp TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCACGCTTCTTTGGGCTTaGACAGCCTCACAGGAACTG +
Preference number: 4 (lower is better)
Translates to: LWYKREHKFDLLSRVLCFTLLWA*TASQEL
Trigger: CAGTTCCTGTGAGGCTGTTCAAGCCCAAAGAAGCGT...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR TCA 90 bp TCTTCAGTCCTCTTGCTAAAATACATACCTGAGCAAAGGACTGAGTACATGCATAAATTGATGCATGCATaGAAGCCATCCTCCGCATGG +
Preference number: 4 (lower is better)
Translates to: SSVLLLKYIPEQRTEYMHKLMHA*KPSSAW
Trigger: CCATGCGGAGGATGGCTTTCATGCATGCATCAATTT...ATGCATGTACTCAGTCCTTTGCTCAGGTATGTATTTTAGCAAGAGGACTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR CCA 90 bp TCTTCAGTCCTCTTGCTAAAATACATACCTGAGCAAAGGACTGAGTACATGCATTCCAAGAGAGATCAATaGCCAGGTATTTACAAACAC +
Preference number: 4 (lower is better)
Translates to: SSVLLLKYIPEQRTEYMHSKRDQ*PGIYKH
Trigger: GTGTTTGTAAATACCTGGCCATTGATCTCTCTTGGA...ATGCATGTACTCAGTCCTTTGCTCAGGTATGTATTTTAGCAAGAGGACTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR TCA 90 bp TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCAATGTCTTAGGAAGCTaGGCAATGATCTTGTCATCT +
Preference number: 4 (lower is better)
Translates to: LWYKREHKFDLLSRVLCFNVLGS*AMILSS
Trigger: AGATGACAAGATCATTGCTCAGCTTCCTAAGACATT...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR TCA 90 bp TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCGCTTATCAAACAAATTaGTGCATGCATGAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LWYKREHKFDLLSRVLCFAYQTN*CMHESH
Trigger: ATGGCTTTCATGCATGCATCAATTTGTTTGATAAGC...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR GCA 90 bp TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCTACAGGAGCATGCAATaGAAAAACCTTAATTTGGCT +
Preference number: 4 (lower is better)
Translates to: LWYKREHKFDLLSRVLCFYRSMQ*KNLNLA
Trigger: AGCCAAATTAAGGTTTTTGCATTGCATGCTCCTGTA...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR CCA 90 bp TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCATGCTTCAGGGTAGATaGAATTTCAACAGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: LWYKREHKFDLLSRVLCFMLQGR*NFNSEK
Trigger: TTTCTCACTGTTGAAATTCCATCTACCCTGAAGCAT...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR CCA 90 bp TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCCATTCCAAACATGTTTaGTTTCTAGATAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LWYKREHKFDLLSRVLCFHSKHV*FLDKQP
Trigger: AGGCTGCTTATCTAGAAACCAAACATGTTTGGAATG...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR CCA 90 bp TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCGTAAAAACCTGGGTATaGAACAAATTCTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LWYKREHKFDLLSRVLCFVKTWV*NKFSVS
Trigger: AGAAACTGAGAATTTGTTCCATACCCAGGTTTTTAC...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS TCA 90 bp GAGTCTGGATTCGAGGTAGATTTGGCATGCTTGTTAAGACCTGGGTaGCCGTGGCCACAGCCCAACCTCCAAGACTGTCTCCACAGAGTA +
Preference number: 5 (lower is better)
Translates to: ESGFEVDLACLLRPG*PWPQPNLQDCLHRV
Trigger: TACTCTGTGGAGACAGTCTTGGAGGTTGGGCTGTGGCCACGGTCACCCAGGTCTTAACAAGCATGCCAAATCTACCTCGAATCCAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS GCA 90 bp GGAGCAGGGGAAAGAGAAAGGCTGCTTATCAAACAAATTGATGCATaGATGAAAGCCATCCTCCGCATGGTACCAGCTCACAGGGATCCC +
Preference number: 5 (lower is better)
Translates to: GAGERERLLIKQIDA*MKAILRMVPAHRDP
Trigger: GGGATCCCTGTGAGCTGGTACCATGCGGAGGATGGCTTTCATGCATGCATCAATTTGTTTGATAAGCAGCCTTTCTCTTTCCCCTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS GCA 90 bp GACGCTTCTTTGGGCTTGAACAGCCTCACAGGAACTGTCCCAAAATaGATGTCAGTCACCGCCACATTAGAGTTCTTCCTTATCAGGATT +
Preference number: 5 (lower is better)
Translates to: DASLGLNSLTGTVPK*MSVTATLEFFLIRI
Trigger: AATCCTGATAAGGAAGAACTCTAATGTGGCGGTGACTGACATGCATTTTGGGACAGTTCCTGTGAGGCTGTTCAAGCCCAAAGAAGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS GCA 90 bp ACTGAGCCATTTCCTGTACTTCTTCCACTTGTCCAGAGGTATAACTaGACCTGTAGACATGGCATCTGTCCAAGAGAGATCAATGGCCAG +
Preference number: 5 (lower is better)
Translates to: TEPFPVLLPLVQRYN*TCRHGICPREINGQ
Trigger: CTGGCCATTGATCTCTCTTGGACAGATGCCATGTCTACAGGTGCAGTTATACCTCTGGACAAGTGGAAGAAGTACAGGAAATGGCTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS TCA 90 bp CGGAGAACATCATGTTCACAGCTCACCAGGAATGTCTTAGGAAGCTaGGCAATGATCTTGTCATCTGCTAGGAGAGGTGAAATTTCTGCA +
Preference number: 5 (lower is better)
Translates to: RRTSCSQLTRNVLGS*AMILSSARRGEISA
Trigger: TGCAGAAATTTCACCTCTCCTAGCAGATGACAAGATCATTGCTCAGCTTCCTAAGACATTCCTGGTGAGCTGTGAACATGATGTTCTCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR CAA 90 bp TCTTCAGTCCTCTTGCTAAAATACATACCTGAGCAAAGGACTGAGTACATGCATGACGCTTCTTTGGGCTaGAACAGCCTCACAGGAACT +
Preference number: 5 (lower is better)
Translates to: SSVLLLKYIPEQRTEYMHDASLG*NSLTGT
Trigger: AGTTCCTGTGAGGCTGTTCAAGCCCAAAGAAGCGTC...ATGCATGTACTCAGTCCTTTGCTCAGGTATGTATTTTAGCAAGAGGACTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR CAA 90 bp TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCCTCAGGTTGTGTGTCTaGTCTCCAGAACCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: LWYKREHKFDLLSRVLCFLRLCV*SPEPSG
Trigger: CCCAGAAGGTTCTGGAGACAAGACACACAACCTGAG...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS GCA 90 bp TTCTCTAGTATGTTTCCCAGAGTTATCAGGTACAGGAGCATGCAATaGAAAAACCTTAATTTGGCTGGATGCTTCAGGGTAGATGGAATT +
Preference number: 5 (lower is better)
Translates to: FSSMFPRVIRYRSMQ*KNLNLAGCFRVDGI
Trigger: AATTCCATCTACCCTGAAGCATCCAGCCAAATTAAGGTTTTTGCATTGCATGCTCCTGTACCTGATAACTCTGGGAAACATACTAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS-3UTR CAA 90 bp TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCTCCAAGAACCTCAGGTaGTGTGTCTTGTCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: LWYKREHKFDLLSRVLCFSKNLR*CVLSPE
Trigger: TTCTGGAGACAAGACACACAACCTGAGGTTCTTGGA...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS CCA 90 bp TCAGTCACCGCCACATTAGAGTTCTTCCTTATCAGGATTAGATCTTaGACAAATTGTAAAAACCTGGGTATGGAACAAATTCTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: SVTATLEFFLIRIRS*TNCKNLGMEQILSF
Trigger: GAAACTGAGAATTTGTTCCATACCCAGGTTTTTACAATTTGTCCAAGATCTAATCCTGATAAGGAAGAACTCTAATGTGGCGGTGACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS CCA 90 bp AGTTCTTCCTTATCAGGATTAGATCTTGGACAAATTGTAAAAACCTaGGTATGGAACAAATTCTCAGTTTCTCTAGTATGTTTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: SSSLSGLDLGQIVKT*VWNKFSVSLVCFPE
Trigger: CTCTGGGAAACATACTAGAGAAACTGAGAATTTGTTCCATACCCAGGTTTTTACAATTTGTCCAAGATCTAATCCTGATAAGGAAGAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS CCA 90 bp TCCTTATCAGGATTAGATCTTGGACAAATTGTAAAAACCTGGGTATaGAACAAATTCTCAGTTTCTCTAGTATGTTTCCCAGAGTTATCA +
Preference number: 5 (lower is better)
Translates to: SLSGLDLGQIVKTWV*NKFSVSLVCFPELS
Trigger: TGATAACTCTGGGAAACATACTAGAGAAACTGAGAATTTGTTCCATACCCAGGTTTTTACAATTTGTCCAAGATCTAATCCTGATAAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS GCA 72 bp TTGGGCTTGAACAGCCTCACAGGAACTGTCCCAAAATaGATGTCAGTCACCGCCACATTAGAGTTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: LGLNSLTGTVPK*MSVTATLEFFL
Trigger: AAGGAAGAACTCTAATGTGGCGGTGACTGACATGCATTTTGGGACAGTTCCTGTGAGGCTGTTCAAGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS TCA 72 bp TATCTCGCCTGTATTTGGAAGACGCTTCTTTGGGCTTaGACAGCCTCACAGGAACTGTCCCAAAATGCATGT +
Preference number: 6 (lower is better)
Translates to: YLACIWKTLLWA*TASQELSQNAC
Trigger: ACATGCATTTTGGGACAGTTCCTGTGAGGCTGTTCAAGCCCAAAGAAGCGTCTTCCAAATACAGGCGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS TCA 72 bp AGCAGGGGAAAGAGAAAGGCTGCTTATCAAACAAATTaGTGCATGCATGAAAGCCATCCTCCGCATGGTACC +
Preference number: 6 (lower is better)
Translates to: SRGKRKAAYQTN*CMHESHPPHGT
Trigger: GGTACCATGCGGAGGATGGCTTTCATGCATGCATCAATTTGTTTGATAAGCAGCCTTTCTCTTTCCCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS TCA 72 bp CTTGTCTCCAGAACCTTCTGGGGATGTTATCATAACTaGGCCATTTCCTGTACTTCTTCCACTTGTCCAGAG +
Preference number: 6 (lower is better)
Translates to: LVSRTFWGCYHN*AISCTSSTCPE
Trigger: CTCTGGACAAGTGGAAGAAGTACAGGAAATGGCTCAGTTATGATAACATCCCCAGAAGGTTCTGGAGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS TCA 72 bp TCATGTTCACAGCTCACCAGGAATGTCTTAGGAAGCTaGGCAATGATCTTGTCATCTGCTAGGAGAGGTGAA +
Preference number: 6 (lower is better)
Translates to: SCSQLTRNVLGS*AMILSSARRGE
Trigger: TTCACCTCTCCTAGCAGATGACAAGATCATTGCTCAGCTTCCTAAGACATTCCTGGTGAGCTGTGAACATGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS GCA 72 bp TTTCCTGTACTTCTTCCACTTGTCCAGAGGTATAACTaGACCTGTAGACATGGCATCTGTCCAAGAGAGATC +
Preference number: 6 (lower is better)
Translates to: FPVLLPLVQRYN*TCRHGICPREI
Trigger: GATCTCTCTTGGACAGATGCCATGTCTACAGGTGCAGTTATACCTCTGGACAAGTGGAAGAAGTACAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS CAA 72 bp CTCATTGAAAGGTCCAAGAACCTCAGGTTGTGTGTCTaGTCTCCAGAACCTTCTGGGGATGTTATCATAACT +
Preference number: 6 (lower is better)
Translates to: LIERSKNLRLCV*SPEPSGDVIIT
Trigger: AGTTATGATAACATCCCCAGAAGGTTCTGGAGACAAGACACACAACCTGAGGTTCTTGGACCTTTCAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS CAA 90 bp CCCAGAGTTATCAGGTACAGGAGCATGCAATGCAAAAACCTTAATTaGGCTGGATGCTTCAGGGTAGATGGAATTTCAACAGTGAGAAAG +
Preference number: 6 (lower is better)
Translates to: PRVIRYRSMQCKNLN*AGCFRVDGISTVRK
Trigger: CTTTCTCACTGTTGAAATTCCATCTACCCTGAAGCATCCAGCCAAATTAAGGTTTTTGCATTGCATGCTCCTGTACCTGATAACTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS TCA 72 bp TCCAAACATGTTTGGTTTCTAGATAAGCAGCCTCATTaGAAGGTCCAAGAACCTCAGGTTGTGTGTCTTGTC +
Preference number: 6 (lower is better)
Translates to: SKHVWFLDKQPH*KVQEPQVVCLV
Trigger: GACAAGACACACAACCTGAGGTTCTTGGACCTTTCAATGAGGCTGCTTATCTAGAAACCAAACATGTTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS GCA 72 bp ATGTTTCCCAGAGTTATCAGGTACAGGAGCATGCAATaGAAAAACCTTAATTTGGCTGGATGCTTCAGGGTA +
Preference number: 6 (lower is better)
Translates to: MFPRVIRYRSMQ*KNLNLAGCFRV
Trigger: TACCCTGAAGCATCCAGCCAAATTAAGGTTTTTGCATTGCATGCTCCTGTACCTGATAACTCTGGGAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3
CDS CAA 72 bp ATCAGGTACAGGAGCATGCAATGCAAAAACCTTAATTaGGCTGGATGCTTCAGGGTAGATGGAATTTCAACA +
Preference number: 6 (lower is better)
Translates to: IRYRSMQCKNLN*AGCFRVDGIST
Trigger: TGTTGAAATTCCATCTACCCTGAAGCATCCAGCCAAATTAAGGTTTTTGCATTGCATGCTCCTGTACCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105746.3