Pregenerated sensors for AADACL4FM5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078504Ensembl transcript IDs: ENSMUST00000105746.3
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACACTGTATTTGTGGTATAAGAGAGAACACAAATTTGACTTATTaGGCAGAGTTCTCTGCTTCCACATCTAATTCCAACATGCGTCAT | + |
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Preference number: 1 (lower is better) Translates to: THCICGIRENTNLTY*AEFSASTSNSNMRH Trigger: ATGACGCATGTTGGAATTAGATGTGGAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAAATACAGTGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| 3UTR-3UTR TCA 90 bp | TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCTGCATAGGTATTCCTTaGCTCACTCCACTGAAACCC | + |
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Preference number: 2 (lower is better) Translates to: LWYKREHKFDLLSRVLCFCIGIP*LTPLKP Trigger: GGGTTTCAGTGGAGTGAGTCAAGGAATACCTATGCA...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR GCA 90 bp | TCTTCAGTCCTCTTGCTAAAATACATACCTGAGCAAAGGACTGAGTACATGCATCATGGGCCAGGAAGCTaGCCAGGCCATGGTAAGTAT | + |
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Preference number: 4 (lower is better) Translates to: SSVLLLKYIPEQRTEYMHHGPGS*PGHGKY Trigger: ATACTTACCATGGCCTGGGCAGCTTCCTGGCCCATG...ATGCATGTACTCAGTCCTTTGCTCAGGTATGTATTTTAGCAAGAGGACTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR CCA 90 bp | TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCCTCACAGGGATCCCCTaGTCTTCCAAGCGCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LWYKREHKFDLLSRVLCFLTGIP*SSKRLL Trigger: CAAGAGGCGCTTGGAAGACCAGGGGATCCCTGTGAG...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR CCA 90 bp | TCTTCAGTCCTCTTGCTAAAATACATACCTGAGCAAAGGACTGAGTACATGCATCCCCCAGGAAGAATGTaGATACTCCTGCTAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: SSVLLLKYIPEQRTEYMHPPGRM*ILLLEA Trigger: TGCTTCTAGCAGGAGTATCCACATTCTTCCTGGGGG...ATGCATGTACTCAGTCCTTTGCTCAGGTATGTATTTTAGCAAGAGGACTGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR CCA 90 bp | TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCAATGAGTCTGTCTCATaGGCCAGGAAGCTGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LWYKREHKFDLLSRVLCFNESVS*ARKLPR Trigger: CCTGGGCAGCTTCCTGGCCCATGAGACAGACTCATT...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR CCA 90 bp | TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCAAGCCATCCTCCGCATaGTACCAGCTCACAGGGATC | + |
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Preference number: 4 (lower is better) Translates to: LWYKREHKFDLLSRVLCFKPSSA*YQLTGI Trigger: GATCCCTGTGAGCTGGTACCATGCGGAGGATGGCTT...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR TCA 90 bp | TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCACGCTTCTTTGGGCTTaGACAGCCTCACAGGAACTG | + |
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Preference number: 4 (lower is better) Translates to: LWYKREHKFDLLSRVLCFTLLWA*TASQEL Trigger: CAGTTCCTGTGAGGCTGTTCAAGCCCAAAGAAGCGT...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR TCA 90 bp | TCTTCAGTCCTCTTGCTAAAATACATACCTGAGCAAAGGACTGAGTACATGCATAAATTGATGCATGCATaGAAGCCATCCTCCGCATGG | + |
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Preference number: 4 (lower is better) Translates to: SSVLLLKYIPEQRTEYMHKLMHA*KPSSAW Trigger: CCATGCGGAGGATGGCTTTCATGCATGCATCAATTT...ATGCATGTACTCAGTCCTTTGCTCAGGTATGTATTTTAGCAAGAGGACTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR CCA 90 bp | TCTTCAGTCCTCTTGCTAAAATACATACCTGAGCAAAGGACTGAGTACATGCATTCCAAGAGAGATCAATaGCCAGGTATTTACAAACAC | + |
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Preference number: 4 (lower is better) Translates to: SSVLLLKYIPEQRTEYMHSKRDQ*PGIYKH Trigger: GTGTTTGTAAATACCTGGCCATTGATCTCTCTTGGA...ATGCATGTACTCAGTCCTTTGCTCAGGTATGTATTTTAGCAAGAGGACTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR TCA 90 bp | TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCAATGTCTTAGGAAGCTaGGCAATGATCTTGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: LWYKREHKFDLLSRVLCFNVLGS*AMILSS Trigger: AGATGACAAGATCATTGCTCAGCTTCCTAAGACATT...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR TCA 90 bp | TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCGCTTATCAAACAAATTaGTGCATGCATGAAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LWYKREHKFDLLSRVLCFAYQTN*CMHESH Trigger: ATGGCTTTCATGCATGCATCAATTTGTTTGATAAGC...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR GCA 90 bp | TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCTACAGGAGCATGCAATaGAAAAACCTTAATTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LWYKREHKFDLLSRVLCFYRSMQ*KNLNLA Trigger: AGCCAAATTAAGGTTTTTGCATTGCATGCTCCTGTA...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR CCA 90 bp | TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCATGCTTCAGGGTAGATaGAATTTCAACAGTGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LWYKREHKFDLLSRVLCFMLQGR*NFNSEK Trigger: TTTCTCACTGTTGAAATTCCATCTACCCTGAAGCAT...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR CCA 90 bp | TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCCATTCCAAACATGTTTaGTTTCTAGATAAGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LWYKREHKFDLLSRVLCFHSKHV*FLDKQP Trigger: AGGCTGCTTATCTAGAAACCAAACATGTTTGGAATG...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR CCA 90 bp | TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCGTAAAAACCTGGGTATaGAACAAATTCTCAGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LWYKREHKFDLLSRVLCFVKTWV*NKFSVS Trigger: AGAAACTGAGAATTTGTTCCATACCCAGGTTTTTAC...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS TCA 90 bp | GAGTCTGGATTCGAGGTAGATTTGGCATGCTTGTTAAGACCTGGGTaGCCGTGGCCACAGCCCAACCTCCAAGACTGTCTCCACAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: ESGFEVDLACLLRPG*PWPQPNLQDCLHRV Trigger: TACTCTGTGGAGACAGTCTTGGAGGTTGGGCTGTGGCCACGGTCACCCAGGTCTTAACAAGCATGCCAAATCTACCTCGAATCCAGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS GCA 90 bp | GGAGCAGGGGAAAGAGAAAGGCTGCTTATCAAACAAATTGATGCATaGATGAAAGCCATCCTCCGCATGGTACCAGCTCACAGGGATCCC | + |
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Preference number: 5 (lower is better) Translates to: GAGERERLLIKQIDA*MKAILRMVPAHRDP Trigger: GGGATCCCTGTGAGCTGGTACCATGCGGAGGATGGCTTTCATGCATGCATCAATTTGTTTGATAAGCAGCCTTTCTCTTTCCCCTGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS GCA 90 bp | GACGCTTCTTTGGGCTTGAACAGCCTCACAGGAACTGTCCCAAAATaGATGTCAGTCACCGCCACATTAGAGTTCTTCCTTATCAGGATT | + |
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Preference number: 5 (lower is better) Translates to: DASLGLNSLTGTVPK*MSVTATLEFFLIRI Trigger: AATCCTGATAAGGAAGAACTCTAATGTGGCGGTGACTGACATGCATTTTGGGACAGTTCCTGTGAGGCTGTTCAAGCCCAAAGAAGCGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS GCA 90 bp | ACTGAGCCATTTCCTGTACTTCTTCCACTTGTCCAGAGGTATAACTaGACCTGTAGACATGGCATCTGTCCAAGAGAGATCAATGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: TEPFPVLLPLVQRYN*TCRHGICPREINGQ Trigger: CTGGCCATTGATCTCTCTTGGACAGATGCCATGTCTACAGGTGCAGTTATACCTCTGGACAAGTGGAAGAAGTACAGGAAATGGCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS TCA 90 bp | CGGAGAACATCATGTTCACAGCTCACCAGGAATGTCTTAGGAAGCTaGGCAATGATCTTGTCATCTGCTAGGAGAGGTGAAATTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: RRTSCSQLTRNVLGS*AMILSSARRGEISA Trigger: TGCAGAAATTTCACCTCTCCTAGCAGATGACAAGATCATTGCTCAGCTTCCTAAGACATTCCTGGTGAGCTGTGAACATGATGTTCTCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR CAA 90 bp | TCTTCAGTCCTCTTGCTAAAATACATACCTGAGCAAAGGACTGAGTACATGCATGACGCTTCTTTGGGCTaGAACAGCCTCACAGGAACT | + |
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Preference number: 5 (lower is better) Translates to: SSVLLLKYIPEQRTEYMHDASLG*NSLTGT Trigger: AGTTCCTGTGAGGCTGTTCAAGCCCAAAGAAGCGTC...ATGCATGTACTCAGTCCTTTGCTCAGGTATGTATTTTAGCAAGAGGACTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR CAA 90 bp | TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCCTCAGGTTGTGTGTCTaGTCTCCAGAACCTTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: LWYKREHKFDLLSRVLCFLRLCV*SPEPSG Trigger: CCCAGAAGGTTCTGGAGACAAGACACACAACCTGAG...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS GCA 90 bp | TTCTCTAGTATGTTTCCCAGAGTTATCAGGTACAGGAGCATGCAATaGAAAAACCTTAATTTGGCTGGATGCTTCAGGGTAGATGGAATT | + |
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Preference number: 5 (lower is better) Translates to: FSSMFPRVIRYRSMQ*KNLNLAGCFRVDGI Trigger: AATTCCATCTACCCTGAAGCATCCAGCCAAATTAAGGTTTTTGCATTGCATGCTCCTGTACCTGATAACTCTGGGAAACATACTAGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS-3UTR CAA 90 bp | TTGTGGTATAAGAGAGAACACAAATTTGACTTATTGAGCAGAGTTCTCTGCTTCTCCAAGAACCTCAGGTaGTGTGTCTTGTCTCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: LWYKREHKFDLLSRVLCFSKNLR*CVLSPE Trigger: TTCTGGAGACAAGACACACAACCTGAGGTTCTTGGA...GAAGCAGAGAACTCTGCTCAATAAGTCAAATTTGTGTTCTCTCTTATACCACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS CCA 90 bp | TCAGTCACCGCCACATTAGAGTTCTTCCTTATCAGGATTAGATCTTaGACAAATTGTAAAAACCTGGGTATGGAACAAATTCTCAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: SVTATLEFFLIRIRS*TNCKNLGMEQILSF Trigger: GAAACTGAGAATTTGTTCCATACCCAGGTTTTTACAATTTGTCCAAGATCTAATCCTGATAAGGAAGAACTCTAATGTGGCGGTGACTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS CCA 90 bp | AGTTCTTCCTTATCAGGATTAGATCTTGGACAAATTGTAAAAACCTaGGTATGGAACAAATTCTCAGTTTCTCTAGTATGTTTCCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SSSLSGLDLGQIVKT*VWNKFSVSLVCFPE Trigger: CTCTGGGAAACATACTAGAGAAACTGAGAATTTGTTCCATACCCAGGTTTTTACAATTTGTCCAAGATCTAATCCTGATAAGGAAGAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS CCA 90 bp | TCCTTATCAGGATTAGATCTTGGACAAATTGTAAAAACCTGGGTATaGAACAAATTCTCAGTTTCTCTAGTATGTTTCCCAGAGTTATCA | + |
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Preference number: 5 (lower is better) Translates to: SLSGLDLGQIVKTWV*NKFSVSLVCFPELS Trigger: TGATAACTCTGGGAAACATACTAGAGAAACTGAGAATTTGTTCCATACCCAGGTTTTTACAATTTGTCCAAGATCTAATCCTGATAAGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS GCA 72 bp | TTGGGCTTGAACAGCCTCACAGGAACTGTCCCAAAATaGATGTCAGTCACCGCCACATTAGAGTTCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LGLNSLTGTVPK*MSVTATLEFFL Trigger: AAGGAAGAACTCTAATGTGGCGGTGACTGACATGCATTTTGGGACAGTTCCTGTGAGGCTGTTCAAGCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS TCA 72 bp | TATCTCGCCTGTATTTGGAAGACGCTTCTTTGGGCTTaGACAGCCTCACAGGAACTGTCCCAAAATGCATGT | + |
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Preference number: 6 (lower is better) Translates to: YLACIWKTLLWA*TASQELSQNAC Trigger: ACATGCATTTTGGGACAGTTCCTGTGAGGCTGTTCAAGCCCAAAGAAGCGTCTTCCAAATACAGGCGAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS TCA 72 bp | AGCAGGGGAAAGAGAAAGGCTGCTTATCAAACAAATTaGTGCATGCATGAAAGCCATCCTCCGCATGGTACC | + |
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Preference number: 6 (lower is better) Translates to: SRGKRKAAYQTN*CMHESHPPHGT Trigger: GGTACCATGCGGAGGATGGCTTTCATGCATGCATCAATTTGTTTGATAAGCAGCCTTTCTCTTTCCCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS TCA 72 bp | CTTGTCTCCAGAACCTTCTGGGGATGTTATCATAACTaGGCCATTTCCTGTACTTCTTCCACTTGTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LVSRTFWGCYHN*AISCTSSTCPE Trigger: CTCTGGACAAGTGGAAGAAGTACAGGAAATGGCTCAGTTATGATAACATCCCCAGAAGGTTCTGGAGACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS TCA 72 bp | TCATGTTCACAGCTCACCAGGAATGTCTTAGGAAGCTaGGCAATGATCTTGTCATCTGCTAGGAGAGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: SCSQLTRNVLGS*AMILSSARRGE Trigger: TTCACCTCTCCTAGCAGATGACAAGATCATTGCTCAGCTTCCTAAGACATTCCTGGTGAGCTGTGAACATGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS GCA 72 bp | TTTCCTGTACTTCTTCCACTTGTCCAGAGGTATAACTaGACCTGTAGACATGGCATCTGTCCAAGAGAGATC | + |
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Preference number: 6 (lower is better) Translates to: FPVLLPLVQRYN*TCRHGICPREI Trigger: GATCTCTCTTGGACAGATGCCATGTCTACAGGTGCAGTTATACCTCTGGACAAGTGGAAGAAGTACAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS CAA 72 bp | CTCATTGAAAGGTCCAAGAACCTCAGGTTGTGTGTCTaGTCTCCAGAACCTTCTGGGGATGTTATCATAACT | + |
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Preference number: 6 (lower is better) Translates to: LIERSKNLRLCV*SPEPSGDVIIT Trigger: AGTTATGATAACATCCCCAGAAGGTTCTGGAGACAAGACACACAACCTGAGGTTCTTGGACCTTTCAATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS CAA 90 bp | CCCAGAGTTATCAGGTACAGGAGCATGCAATGCAAAAACCTTAATTaGGCTGGATGCTTCAGGGTAGATGGAATTTCAACAGTGAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: PRVIRYRSMQCKNLN*AGCFRVDGISTVRK Trigger: CTTTCTCACTGTTGAAATTCCATCTACCCTGAAGCATCCAGCCAAATTAAGGTTTTTGCATTGCATGCTCCTGTACCTGATAACTCTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS TCA 72 bp | TCCAAACATGTTTGGTTTCTAGATAAGCAGCCTCATTaGAAGGTCCAAGAACCTCAGGTTGTGTGTCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: SKHVWFLDKQPH*KVQEPQVVCLV Trigger: GACAAGACACACAACCTGAGGTTCTTGGACCTTTCAATGAGGCTGCTTATCTAGAAACCAAACATGTTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS GCA 72 bp | ATGTTTCCCAGAGTTATCAGGTACAGGAGCATGCAATaGAAAAACCTTAATTTGGCTGGATGCTTCAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: MFPRVIRYRSMQ*KNLNLAGCFRV Trigger: TACCCTGAAGCATCCAGCCAAATTAAGGTTTTTGCATTGCATGCTCCTGTACCTGATAACTCTGGGAAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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| CDS CAA 72 bp | ATCAGGTACAGGAGCATGCAATGCAAAAACCTTAATTaGGCTGGATGCTTCAGGGTAGATGGAATTTCAACA | + |
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Preference number: 6 (lower is better) Translates to: IRYRSMQCKNLN*AGCFRVDGIST Trigger: TGTTGAAATTCCATCTACCCTGAAGCATCCAGCCAAATTAAGGTTTTTGCATTGCATGCTCCTGTACCTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105746.3 |
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