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Pregenerated sensors for AADACL4FM4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078505

Ensembl transcript IDs: ENSMUST00000105747.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CGAACTATGTCATACTCACAGCTCACTAGGAATGCCTCAGGAAGCTaGGCAATGGTCTTATCATCTGCGATGATAGGTGAAATTTCTGGA +
Preference number: 5 (lower is better)
Translates to: RTMSYSQLTRNASGS*AMVLSSAMIGEISG
Trigger: TCCAGAAATTTCACCTATCATCGCAGATGATAAGACCATTGCTCAGCTTCCTGAGGCATTCCTAGTGAGCTGTGAGTATGACATAGTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105747.2
CDS GCA 90 bp ATTATGAAGAGCATCAGACAATGCATACACCTGAACTTGACTGGATaGTGTAAAGAGGAAGGAATTTCTGCTGTGATAAAATGCTTTACC +
Preference number: 5 (lower is better)
Translates to: IMKSIRQCIHLNLTG*CKEEGISAVIKCFT
Trigger: GGTAAAGCATTTTATCACAGCAGAAATTCCTTCCTCTTTACAGCATCCAGTCAAGTTCAGGTGTATGCATTGTCTGATGCTCTTCATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105747.2
CDS CCA 72 bp ATGCCCCTCCGGAGTTTGGAGGACACTGCCTTGGGCTaGAACAGTCTCACAGGGATTGTCCCCAAATGCATG +
Preference number: 6 (lower is better)
Translates to: MPLRSLEDTALG*NSLTGIVPKCM
Trigger: CATGCATTTGGGGACAATCCCTGTGAGACTGTTCCAGCCCAAGGCAGTGTCCTCCAAACTCCGGAGGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105747.2
CDS CAA 72 bp GGTTGTGTGTCTTGGCTCCAGAGCCTTCTGGGAATATaGTCAGAGCTGAGCCATTTTCTGTATTTCTTCCAC +
Preference number: 6 (lower is better)
Translates to: GCVSWLQSLLGI*SELSHFLYFFH
Trigger: GTGGAAGAAATACAGAAAATGGCTCAGCTCTGACAATATTCCCAGAAGGCTCTGGAGCCAAGACACACAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105747.2
CDS CAA 90 bp AGAAACTCAGGTTGTGTGTCTTGGCTCCAGAGCCTTCTGGGAATATaGTCAGAGCTGAGCCATTTTCTGTATTTCTTCCACTTGTCCAGA +
Preference number: 6 (lower is better)
Translates to: RNSGCVSWLQSLLGI*SELSHFLYFFHLSR
Trigger: TCTGGACAAGTGGAAGAAATACAGAAAATGGCTCAGCTCTGACAATATTCCCAGAAGGCTCTGGAGCCAAGACACACAACCTGAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105747.2
CDS TCA 72 bp GATAGAAACTTTCTATCAAACAGAAGGACGCATCCATaGAAGCCATCCATCACATGGTGCCAGGTCACAGGA +
Preference number: 6 (lower is better)
Translates to: DRNFLSNRRTHP*KPSITWCQVTG
Trigger: TCCTGTGACCTGGCACCATGTGATGGATGGCTTTCATGGATGCGTCCTTCTGTTTGATAGAAAGTTTCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105747.2
CDS CAA 90 bp CTGGGAATATTGTCAGAGCTGAGCCATTTTCTGTATTTCTTCCACTaGTCCAGAGGTATAACAGCACCTGTAAGCATGGAATCTCCCCAA +
Preference number: 6 (lower is better)
Translates to: LGILSELSHFLYFFH*SRGITAPVSMESPQ
Trigger: TTGGGGAGATTCCATGCTTACAGGTGCTGTTATACCTCTGGACAAGTGGAAGAAATACAGAAAATGGCTCAGCTCTGACAATATTCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105747.2
CDS CCA 72 bp TCATTAAAATGTCCAAGAAACTCAGGTTGTGTGTCTTaGCTCCAGAGCCTTCTGGGAATATTGTCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: SLKCPRNSGCVS*LQSLLGILSEL
Trigger: CAGCTCTGACAATATTCCCAGAAGGCTCTGGAGCCAAGACACACAACCTGAGTTTCTTGGACATTTTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105747.2
CDS CAA 72 bp CTCATTAAAATGTCCAAGAAACTCAGGTTGTGTGTCTaGGCTCCAGAGCCTTCTGGGAATATTGTCAGAGCT +
Preference number: 6 (lower is better)
Translates to: LIKMSKKLRLCV*APEPSGNIVRA
Trigger: AGCTCTGACAATATTCCCAGAAGGCTCTGGAGCCAAGACACACAACCTGAGTTTCTTGGACATTTTAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105747.2
CDS GCA 72 bp TGCTGTAAAGAGGAAGGAATTTCTGCTGTGATAAAATaGTTTACCACAGCCCATATAAAGACTCCCAGTAAG +
Preference number: 6 (lower is better)
Translates to: CCKEEGISAVIK*FTTAHIKTPSK
Trigger: CTTACTGGGAGTCTTTATATGGGCTGTGGTAAAGCATTTTATCACAGCAGAAATTCCTTCCTCTTTACAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105747.2
CDS GCA 72 bp AGCATCAGACAATGCATACACCTGAACTTGACTGGATaGTGTAAAGAGGAAGGAATTTCTGCTGTGATAAAA +
Preference number: 6 (lower is better)
Translates to: SIRQCIHLNLTG*CKEEGISAVIK
Trigger: TTTTATCACAGCAGAAATTCCTTCCTCTTTACAGCATCCAGTCAAGTTCAGGTGTATGCATTGTCTGATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105747.2
CDS CAA 72 bp ATTATGAAGAGCATCAGACAATGCATACACCTGAACTaGACTGGATGCTGTAAAGAGGAAGGAATTTCTGCT +
Preference number: 6 (lower is better)
Translates to: IMKSIRQCIHLN*TGCCKEEGISA
Trigger: AGCAGAAATTCCTTCCTCTTTACAGCATCCAGTCAAGTTCAGGTGTATGCATTGTCTGATGCTCTTCATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105747.2