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Pregenerated sensors for AADACL4FM2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078506

Ensembl transcript IDs: ENSMUST00000105748.2

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GGCCGCAGCCCCAGCTCCAATGCTTTCTCCACTAACCACCACTCGTaGTGGGTCTACGCCATAGGTTTTAAGTTCTTTCAAGAAGTGGAC +
Preference number: 5 (lower is better)
Translates to: GRSPSSNAFSTNHHS*WVYAIGFKFFQEVD
Trigger: GTCCACTTCTTGAAAGAACTTAAAACCTATGGCGTAGACCCAGCACGAGTGGTGGTTAGTGGAGAAAGCATTGGAGCTGGGGCTGCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS TCA 90 bp AAGAATCAAGGCTACCAAACACACCACCTCCTCCATGGTAAAAGATaGTGCCTTTCCGGGGGCCAGAGGAGGTTGCCTTGGGCTGAAACA +
Preference number: 5 (lower is better)
Translates to: KNQGYQTHHLLHGKR*CLSGGQRRLPWAET
Trigger: TGTTTCAGCCCAAGGCAACCTCCTCTGGCCCCCGGAAAGGCATCATCTTTTACCATGGAGGAGGTGGTGTGTTTGGTAGCCTTGATTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS GCA 90 bp ACCCCACTGCCATTACCACCGAATCTGTCTCATGGGCCAGGTAACTaGAAGTGTTGTGGTAAGAATCAAGGCTACCAAACACACCACCTC +
Preference number: 5 (lower is better)
Translates to: TPLPLPPNLSHGPGN*KCCGKNQGYQTHHL
Trigger: GAGGTGGTGTGTTTGGTAGCCTTGATTCTTACCACAACACTTGCAGTTACCTGGCCCATGAGACAGATTCGGTGGTAATGGCAGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS CCA 90 bp CGCAGCCCCAGCTCCAATGCTTTCTCCACTAACCACCACTCGTGCTaGGTCTACGCCATAGGTTTTAAGTTCTTTCAAGAAGTGGACTGT +
Preference number: 5 (lower is better)
Translates to: RSPSSNAFSTNHHSC*VYAIGFKFFQEVDC
Trigger: ACAGTCCACTTCTTGAAAGAACTTAAAACCTATGGCGTAGACCCAGCACGAGTGGTGGTTAGTGGAGAAAGCATTGGAGCTGGGGCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS TCA 72 bp ATGCCTTTCCGGGGGCCAGAGGAGGTTGCCTTGGGCTaGAACAGTCTCACAGGAATTGTGCCAAAATGCATG +
Preference number: 6 (lower is better)
Translates to: MPFRGPEEVALG*NSLTGIVPKCM
Trigger: CATGCATTTTGGCACAATTCCTGTGAGACTGTTTCAGCCCAAGGCAACCTCCTCTGGCCCCCGGAAAGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS GCA 72 bp GTAAAAGATGATGCCTTTCCGGGGGCCAGAGGAGGTTaGCTTGGGCTGAAACAGTCTCACAGGAATTGTGCC +
Preference number: 6 (lower is better)
Translates to: VKDDAFPGARGG*LGLKQSHRNCA
Trigger: GGCACAATTCCTGTGAGACTGTTTCAGCCCAAGGCAACCTCCTCTGGCCCCCGGAAAGGCATCATCTTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS CAA 72 bp AAAGGCCCAGGAAATTCAGGTTGTCGGCCTTGGCTCTaGAATCTTTGGGGGATGTTGTCAGAGCTGAGCCAT +
Preference number: 6 (lower is better)
Translates to: KGPGNSGCRPWL*NLWGMLSELSH
Trigger: ATGGCTCAGCTCTGACAACATCCCCCAAAGATTCAAGAGCCAAGGCCGACAACCTGAATTTCCTGGGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS TCA 72 bp TCATACTCACTGCTCACCAGGAAGGTTTCAGGAAGCTaGGCAATGATCTTGTCATCTGCCAGGAGAGGTGAG +
Preference number: 6 (lower is better)
Translates to: SYSLLTRKVSGS*AMILSSARRGE
Trigger: CTCACCTCTCCTGGCAGATGACAAGATCATTGCTCAGCTTCCTGAAACCTTCCTGGTGAGCAGTGAGTATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS CAA 72 bp GGTTGTCGGCCTTGGCTCTTGAATCTTTGGGGGATGTaGTCAGAGCTGAGCCATTTCGCATACTTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: GCRPWLLNLWGM*SELSHFAYFFQ
Trigger: CTGGAAAAAGTATGCGAAATGGCTCAGCTCTGACAACATCCCCCAAAGATTCAAGAGCCAAGGCCGACAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS CAA 90 bp GACTCATTAAAAGGCCCAGGAAATTCAGGTTGTCGGCCTTGGCTCTaGAATCTTTGGGGGATGTTGTCAGAGCTGAGCCATTTCGCATAC +
Preference number: 6 (lower is better)
Translates to: DSLKGPGNSGCRPWL*NLWGMLSELSHFAY
Trigger: GTATGCGAAATGGCTCAGCTCTGACAACATCCCCCAAAGATTCAAGAGCCAAGGCCGACAACCTGAATTTCCTGGGCCTTTTAATGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS GCA 72 bp CCCAGCTCCAATGCTTTCTCCACTAACCACCACTCGTaGTGGGTCTACGCCATAGGTTTTAAGTTCTTTCAA +
Preference number: 6 (lower is better)
Translates to: PSSNAFSTNHHS*WVYAIGFKFFQ
Trigger: TTGAAAGAACTTAAAACCTATGGCGTAGACCCAGCACGAGTGGTGGTTAGTGGAGAAAGCATTGGAGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS CCA 72 bp TCATTAAAAGGCCCAGGAAATTCAGGTTGTCGGCCTTaGCTCTTGAATCTTTGGGGGATGTTGTCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: SLKGPGNSGCRP*LLNLWGMLSEL
Trigger: CAGCTCTGACAACATCCCCCAAAGATTCAAGAGCCAAGGCCGACAACCTGAATTTCCTGGGCCTTTTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS CAA 72 bp AGGAAATTCAGGTTGTCGGCCTTGGCTCTTGAATCTTaGGGGGATGTTGTCAGAGCTGAGCCATTTCGCATA +
Preference number: 6 (lower is better)
Translates to: RKFRLSALALES*GDVVRAEPFRI
Trigger: TATGCGAAATGGCTCAGCTCTGACAACATCCCCCAAAGATTCAAGAGCCAAGGCCGACAACCTGAATTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS GCA 72 bp CCATTACCACCGAATCTGTCTCATGGGCCAGGTAACTaGAAGTGTTGTGGTAAGAATCAAGGCTACCAAACA +
Preference number: 6 (lower is better)
Translates to: PLPPNLSHGPGN*KCCGKNQGYQT
Trigger: TGTTTGGTAGCCTTGATTCTTACCACAACACTTGCAGTTACCTGGCCCATGAGACAGATTCGGTGGTAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS CAA 72 bp AGGAGGTTGCCTTGGGCTGAAACAGTCTCACAGGAATaGTGCCAAAATGCATGTTCTTCACCAACACACCAA +
Preference number: 6 (lower is better)
Translates to: RRLPWAETVSQE*CQNACSSPTHQ
Trigger: TTGGTGTGTTGGTGAAGAACATGCATTTTGGCACAATTCCTGTGAGACTGTTTCAGCCCAAGGCAACCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS GCA 72 bp AGGTTGCCTTGGGCTGAAACAGTCTCACAGGAATTGTaGCAAAATGCATGTTCTTCACCAACACACCAAAGT +
Preference number: 6 (lower is better)
Translates to: RLPWAETVSQEL*QNACSSPTHQS
Trigger: ACTTTGGTGTGTTGGTGAAGAACATGCATTTTGGCACAATTCCTGTGAGACTGTTTCAGCCCAAGGCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS CCA 72 bp AGCTCCAATGCTTTCTCCACTAACCACCACTCGTGCTaGGTCTACGCCATAGGTTTTAAGTTCTTTCAAGAA +
Preference number: 6 (lower is better)
Translates to: SSNAFSTNHHSC*VYAIGFKFFQE
Trigger: TTCTTGAAAGAACTTAAAACCTATGGCGTAGACCCAGCACGAGTGGTGGTTAGTGGAGAAAGCATTGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2
CDS CAA 72 bp AAATTTTCATCTTCTCCAGTACATTCCCCAATGCTATaGTCAGCTGGAAGAAGTAGTGGAGCATGTGAAATT +
Preference number: 6 (lower is better)
Translates to: KFSSSPVHSPML*SAGRSSGACEI
Trigger: AATTTCACATGCTCCACTACTTCTTCCAGCTGACAATAGCATTGGGGAATGTACTGGAGAAGATGAAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105748.2