Pregenerated sensors for AADACL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078507Ensembl transcript IDs: ENSMUST00000105749.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAACAAGTTAAGGCATGTCCAGGTTTCCATGTGAGTGGACTTGGATaGTGGCATTTGAAAGCTGCTCCTGAAGACAGGAGGACAACATGG | + |
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Preference number: 1 (lower is better) Translates to: EQVKACPGFHVSGLG*WHLKAAPEDRRTTW Trigger: CCATGTTGTCCTCCTGTCTTCAGGAGCAGCTTTCAAATGCCAGCATCCAAGTCCACTCACATGGAAACCTGGACATGCCTTAACTTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR CCA 90 bp | CAAGTTAAGGCATGTCCAGGTTTCCATGTGAGTGGACTTGGATGCTaGCATTTGAAAGCTGCTCCTGAAGACAGGAGGACAACATGGTCT | + |
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Preference number: 1 (lower is better) Translates to: QVKACPGFHVSGLGC*HLKAAPEDRRTTWS Trigger: AGACCATGTTGTCCTCCTGTCTTCAGGAGCAGCTTTCAAATGCCAGCATCCAAGTCCACTCACATGGAAACCTGGACATGCCTTAACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR TCA 90 bp | GGGGCAGTTGGTCATTATGGCTCCAGCATCTTTTTGCCACATCCATaGAACTTGATTAATTTGGGCCTTCATTTCACTTCCATAGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: GAVGHYGSSIFLPHP*NLINLGLHFTSIVG Trigger: CCCAACTATGGAAGTGAAATGAAGGCCCAAATTAATCAAGTTTCATGGATGTGGCAAAAAGATGCTGGAGCCATAATGACCAACTGCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR CCA 90 bp | AATTTTGGCTCTCTTCACTTGTCTCTATTTAGGAGCCATGTACCATaGGGAATCTGTCTCCCCTGTTTCACAACTTTCAACTCAAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: NFGSLHLSLFRSHVP*GICLPCFTTFNSSK Trigger: CTTGCTTGAGTTGAAAGTTGTGAAACAGGGGAGACAGATTCCCCATGGTACATGGCTCCTAAATAGAGACAAGTGAAGAGAGCCAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR CCA 90 bp | TACTCAATTCAACTCAGAGACCTATATCAGAGAGGACCATACTCTTaGGGTTCCATTGCTTCCTACAATACATGTTTTCAGTGGCTAGTT | + |
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Preference number: 1 (lower is better) Translates to: YSIQLRDLYQRGPYS*GSIASYNTCFQWLV Trigger: AACTAGCCACTGAAAACATGTATTGTAGGAAGCAATGGAACCCCAAGAGTATGGTCCTCTCTGATATAGGTCTCTGAGTTGAATTGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR CAA 90 bp | AAGGCATGTCCAGGTTTCCATGTGAGTGGACTTGGATGCTGGCATTaGAAAGCTGCTCCTGAAGACAGGAGGACAACATGGTCTTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: KACPGFHVSGLGCWH*KAAPEDRRTTWSSL Trigger: AAGAGAAGACCATGTTGTCCTCCTGTCTTCAGGAGCAGCTTTCAAATGCCAGCATCCAAGTCCACTCACATGGAAACCTGGACATGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGGTATACAGGTTTGCTCCTGGGGACCCCAGCCATCTACTAAGGTAAACGTCTTGGATGCTGGCATTTaGAAGCTGCTCCTGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: KGIQVCSWGPQPSTKVNVLDAGI*KLLLKT Trigger: TGTCTTCAGGAGCAGCTTTCAAATGCCAGCATCCAA...GACGTTTACCTTAGTAGATGGCTGGGGTCCCCAGGAGCAAACCTGTATACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGTTAACAGAAAGGTATACAGGTTTGCTCCTGGGGACCCCAGCCATCTACTAATGCACCATCAGCCCTaGGATGTCCCCAGTCATTTT | + |
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Preference number: 2 (lower is better) Translates to: LVNRKVYRFAPGDPSHLLMHHQP*DVPSHF Trigger: AAAATGACTGGGGACATCTCAGGGCTGATGGTGCAT...TAGTAGATGGCTGGGGTCCCCAGGAGCAAACCTGTATACCTTTCTGTTAACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCCATACCTCTTCAGCCTCCAGTAGCTGTACTATCATTACACAAAACCCACTTTGGGAACTCATTCTaGTACCCAGAATGCCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: QSIPLQPPVAVLSLHKTHFGNSF*YPECPS Trigger: GCTTGGGCATTCTGGGTATCAGAATGAGTTCCCAAA...GTGGGTTTTGTGTAATGATAGTACAGCTACTGGAGGCTGAAGAGGTATGGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR TCA 90 bp | GGACCATACTCTTGGGGTTCCATTGCTTCCTACAATACATGTTTTCAGTGGCTATCAGCTCAGACAGCCTaGATTCTAGCTAAGGGGATT | + |
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Preference number: 2 (lower is better) Translates to: GPYSWGSIASYNTCFQWLSAQTA*ILAKGI Trigger: AATCCCCTTAGCTAGAATTCAGGCTGTCTGAGCTGA...TAGCCACTGAAAACATGTATTGTAGGAAGCAATGGAACCCCAAGAGTATGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR TCA 90 bp | TACTCAATTCAACTCAGAGACCTATATCAGAGAGGACCATACTCTTGGGGTTCCTTTGAAAGCTGCTCCTaGAGACAGGAGGACAACATG | + |
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Preference number: 2 (lower is better) Translates to: YSIQLRDLYQRGPYSWGSFESCS*RQEDNM Trigger: CATGTTGTCCTCCTGTCTTCAGGAGCAGCTTTCAAA...GGAACCCCAAGAGTATGGTCCTCTCTGATATAGGTCTCTGAGTTGAATTGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGATGAGGGAAGTATTCACTACTCTCCTATCTCCAAACACCAGGGGAGGCTTACTTGGGACAAAATaGATTGATTCTTGGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PLMREVFTTLLSPNTRGGLLGTK*IDSWSQ Trigger: CTGAGACCAAGAATCAATGCATTTTGTCCCAAGTAA...GCCTCCCCTGGTGTTTGGAGATAGGAGAGTAGTGAATACTTCCCTCATCAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGTTAACAGAAAGGTATACAGGTTTGCTCCTGGGGACCCCAGCCATCTACTATGGGACAAAATGCATTaGTTCTTGGTCTCAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: LVNRKVYRFAPGDPSHLLWDKMH*FLVSEQ Trigger: TTGTTCTGAGACCAAGAATCAATGCATTTTGTCCCA...TAGTAGATGGCTGGGGTCCCCAGGAGCAAACCTGTATACCTTTCTGTTAACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTGAAGACATACTCAATTCAACTCAGAGACCTATATCAGAGAGGACCATAAGTGGACTTGGATGCTaGCATTTGAAAGCTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: QAEDILNSTQRPISERTISGLGC*HLKAAP Trigger: AGGAGCAGCTTTCAAATGCCAGCATCCAAGTCCACT...TATGGTCCTCTCTGATATAGGTCTCTGAGTTGAATTGAGTATGTCTTCAGCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAACTCAGAGACCTATATCAGAGAGGACCATACTCTTGGGGTTCCATTGCTTATAAATACATCAGCATaGAGCATAGAAGGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: FNSETYIREDHTLGVPLLINTSA*SIEGQR Trigger: CCTCTGCCCTTCTATGCTCCATGCTGATGTATTTAT...AAGCAATGGAACCCCAAGAGTATGGTCCTCTCTGATATAGGTCTCTGAGTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTGAAGACATACTCAATTCAACTCAGAGACCTATATCAGAGAGGACCATAAGGTTTCCATGTGAGTaGACTTGGATGCTGGCATTT | + |
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Preference number: 2 (lower is better) Translates to: QAEDILNSTQRPISERTIRFPCE*TWMLAF Trigger: AAATGCCAGCATCCAAGTCCACTCACATGGAAACCT...TATGGTCCTCTCTGATATAGGTCTCTGAGTTGAATTGAGTATGTCTTCAGCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGTCAGTCCATACCTCTTCAGCCTCCAGTAGCTGTACTATCATTACACAAATTCTCAAATGGATGCTaGAGATGGTCAGCTCTTATT | + |
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Preference number: 2 (lower is better) Translates to: EGQSIPLQPPVAVLSLHKFSNGC*RWSALI Trigger: AATAAGAGCTGACCATCTTCAGCATCCATTTGAGAA...TTTGTGTAATGATAGTACAGCTACTGGAGGCTGAAGAGGTATGGACTGACCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTCCATACCTCTTCAGCCTCCAGTAGCTGTACTATCATTACACAAAACCCACACTAAAGTCATCTGCTaGATAACTATGAATGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: QSIPLQPPVAVLSLHKTHTKVIC*ITMNGS Trigger: TGAGCCATTCATAGTTATCCAGCAGATGACTTTAGT...GTGGGTTTTGTGTAATGATAGTACAGCTACTGGAGGCTGAAGAGGTATGGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR GCA 90 bp | CATACCTCTTCAGCCTCCAGTAGCTGTACTATCATTACACAAAACCCACTCCAGGTAGAAACAGTGAGTTaGTGTAAAACTTTTGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: HTSSASSSCTIITQNPLQVETVS*CKTFVE Trigger: CTCAACAAAAGTTTTACAGCAACTCACTGTTTCTAC...CTGGAGTGGGTTTTGTGTAATGATAGTACAGCTACTGGAGGCTGAAGAGGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGACCTATATCAGAGAGGACCATACTCTTGGGGTTCCATTGCTTCCTACAATACACATCTGTTCCATTaGCTCTTTTTAGAATTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RDLYQRGPYSWGSIASYNTHLFH*LFLEFP Trigger: TGGGAATTCTAAAAAGAGCCAATGGAACAGATGTGT...ATTGTAGGAAGCAATGGAACCCCAAGAGTATGGTCCTCTCTGATATAGGTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGACTGCTGAGGAAAATGAATATACCCATACAAGTTAGCCTAGATCTTGTATTAGGCAGACAATTTTaGCTCTCTTCACTTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LRLLRKMNIPIQVSLDLVLGRQF*LSSLVS Trigger: AGAGACAAGTGAAGAGAGCCAAAATTGTCTGCCTAA...TACAAGATCTAGGCTAACTTGTATGGGTATATTCATTTTCCTCAGCAGTCTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR GCA 72 bp | AAGGCATGTCCAGGTTTCCATGTGAGTGGACTTGGATaGTGGCATTTGAAAGCTGCTCCTGAAGACAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: KACPGFHVSGLG*WHLKAAPEDRR Trigger: CCTCCTGTCTTCAGGAGCAGCTTTCAAATGCCAGCATCCAAGTCCACTCACATGGAAACCTGGACATGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR CCA 72 bp | GCATGTCCAGGTTTCCATGTGAGTGGACTTGGATGCTaGCATTTGAAAGCTGCTCCTGAAGACAGGAGGACA | + |
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Preference number: 3 (lower is better) Translates to: ACPGFHVSGLGC*HLKAAPEDRRT Trigger: TGTCCTCCTGTCTTCAGGAGCAGCTTTCAAATGCCAGCATCCAAGTCCACTCACATGGAAACCTGGACATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR CAA 90 bp | GGACCATACTCTTGGGGTTCCATTGCTTCCTACAATACATGTTTTCAGTGGCTAATTCCCAAGGGGCAGTaGGTCATTATGGCTCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: GPYSWGSIASYNTCFQWLIPKGQ*VIMAPA Trigger: TGCTGGAGCCATAATGACCAACTGCCCCTTGGGAAT...TAGCCACTGAAAACATGTATTGTAGGAAGCAATGGAACCCCAAGAGTATGGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR CAA 90 bp | CATACCTCTTCAGCCTCCAGTAGCTGTACTATCATTACACAAAACCCACTCCAGCTTTGGGGCTATTTTTaGGGAACTCATTCTGATACC | + |
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Preference number: 3 (lower is better) Translates to: HTSSASSSCTIITQNPLQLWGYF*GTHSDT Trigger: GGTATCAGAATGAGTTCCCAAAAAATAGCCCCAAAG...CTGGAGTGGGTTTTGTGTAATGATAGTACAGCTACTGGAGGCTGAAGAGGTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR CCA 72 bp | TCTCTTCACTTGTCTCTATTTAGGAGCCATGTACCATaGGGAATCTGTCTCCCCTGTTTCACAACTTTCAAC | + |
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Preference number: 3 (lower is better) Translates to: SLHLSLFRSHVP*GICLPCFTTFN Trigger: GTTGAAAGTTGTGAAACAGGGGAGACAGATTCCCCATGGTACATGGCTCCTAAATAGAGACAAGTGAAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGGTCAGTCCATACCTCTTCAGCCTCCAGTAGCTGTACTATCATTACACAAATTTGGCTCTCTTCACTaGTCTCTATTTAGGAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: EGQSIPLQPPVAVLSLHKFGSLH*SLFRSH Trigger: ATGGCTCCTAAATAGAGACAAGTGAAGAGAGCCAAA...TTTGTGTAATGATAGTACAGCTACTGGAGGCTGAAGAGGTATGGACTGACCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR GCA 72 bp | CCTATATCAGAGAGGACCATACTCTTGGGGTTCCATTaGTTCCTACAATACATGTTTTCAGTGGCTAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: PISERTILLGFH*FLQYMFSVASS Trigger: AGAACTAGCCACTGAAAACATGTATTGTAGGAAGCAATGGAACCCCAAGAGTATGGTCCTCTCTGATATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR CCA 72 bp | TTCAGGGCCACCATATTAAGAATAAATACATCAGCATaGAGCATAGAAGGGCAGAGGGTATATGAAGAGACG | + |
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Preference number: 3 (lower is better) Translates to: FRATILRINTSA*SIEGQRVYEET Trigger: CGTCTCTTCATATACCCTCTGCCCTTCTATGCTCCATGCTGATGTATTTATTCTTAATATGGTGGCCCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR CAA 90 bp | GGACCATACTCTTGGGGTTCCATTGCTTCCTACAATACATGTTTTCAGTGGCTATTGGGACAAAATGCATaGATTCTTGGTCTCAGAACA | + |
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Preference number: 3 (lower is better) Translates to: GPYSWGSIASYNTCFQWLLGQNA*ILGLRT Trigger: TGTTCTGAGACCAAGAATCAATGCATTTTGTCCCAA...TAGCCACTGAAAACATGTATTGTAGGAAGCAATGGAACCCCAAGAGTATGGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR TCA 72 bp | GGTCATTATGGCTCCAGCATCTTTTTGCCACATCCATaGAACTTGATTAATTTGGGCCTTCATTTCACTTCC | + |
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Preference number: 3 (lower is better) Translates to: GHYGSSIFLPHP*NLINLGLHFTS Trigger: GGAAGTGAAATGAAGGCCCAAATTAATCAAGTTTCATGGATGTGGCAAAAAGATGCTGGAGCCATAATGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR-3UTR CAA 90 bp | TTGAGACTGCTGAGGAAAATGAATATACCCATACAAGTTAGCCTAGATCTTGTAGATCTTAGCAGGGAATaGTTCAGGGCCACCATATTA | + |
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Preference number: 3 (lower is better) Translates to: LRLLRKMNIPIQVSLDLVDLSRE*FRATIL Trigger: TAATATGGTGGCCCTGAACAATTCCCTGCTAAGATC...TACAAGATCTAGGCTAACTTGTATGGGTATATTCATTTTCCTCAGCAGTCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR TCA 72 bp | TGCTGGATAACTATGAATGGCTCAAGAAGCCACCCATaGGAATTCCTCTCTGATGTTATTTCAACACAATCA | + |
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Preference number: 3 (lower is better) Translates to: CWITMNGSRSHP*EFLSDVISTQS Trigger: TGATTGTGTTGAAATAACATCAGAGAGGAATTCTCATGGGTGGCTTCTTGAGCCATTCATAGTTATCCAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR GCA 72 bp | TCAGTGGCTAGTTCTTATTTTTCTACTAAAGTCATCTaGTGGATAACTATGAATGGCTCAAGAAGCCACCCA | + |
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Preference number: 3 (lower is better) Translates to: SVASSYFSTKVI*WITMNGSRSHP Trigger: TGGGTGGCTTCTTGAGCCATTCATAGTTATCCAGCAGATGACTTTAGTAGAAAAATAAGAACTAGCCACTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR TCA 90 bp | TGTCTCCCCTGTTTCACAACTTTCAACTCAAGCAAGCTAGGCATCCATAGGCTGGCCTCCAGGGGTGAGTaGTGCCTTCAGGGATGTGTT | + |
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Preference number: 4 (lower is better) Translates to: CLPCFTTFNSSKLGIHRLASRGE*CLQGCV Trigger: AACACATCCCTGAAGGCATCACTCACCCCTGGAGGC...CAGCCTATGGATGCCTAGCTTGCTTGAGTTGAAAGTTGTGAAACAGGGGAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR TCA 90 bp | TACTCAATTCAACTCAGAGACCTATATCAGAGAGGACCATACTCTTGGGGTTCCCGAAGCCTCCAGGGGTaGGTGATGCCTTCAGGGATG | + |
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Preference number: 4 (lower is better) Translates to: YSIQLRDLYQRGPYSWGSRSLQG*VMPSGM Trigger: CATCCCTGAAGGCATCACTCACCCCTGGAGGCTTCG...GGAACCCCAAGAGTATGGTCCTCTCTGATATAGGTCTCTGAGTTGAATTGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR GCA 90 bp | TGTCTCCCCTGTTTCACAACTTTCAACTCAAGCAAGCTAGGCATCCATAGGCTGCCACCCACAGCAGACTaGCCAGTGAGAACACAGCAA | + |
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Preference number: 4 (lower is better) Translates to: CLPCFTTFNSSKLGIHRLPPTAD*PVRTQQ Trigger: TTGCTGTGTTCTCACTGGGCAGTCTGCTGTGGGTGG...CAGCCTATGGATGCCTAGCTTGCTTGAGTTGAAAGTTGTGAAACAGGGGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR CAA 72 bp | CCAGGTTTCCATGTGAGTGGACTTGGATGCTGGCATTaGAAAGCTGCTCCTGAAGACAGGAGGACAACATGG | + |
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Preference number: 4 (lower is better) Translates to: PGFHVSGLGCWH*KAAPEDRRTTW Trigger: CCATGTTGTCCTCCTGTCTTCAGGAGCAGCTTTCAAATGCCAGCATCCAAGTCCACTCACATGGAAACCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR TCA 90 bp | TGTACCATGGGGAATCTGTCTCCCCTGTTTCACAACTTTCAACTCAAGCAAGCTTCAAAATCTGAGCCTTaGTCCGGGGGAGATCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: CTMGNLSPLFHNFQLKQASKSEP*SGGDLV Trigger: GACCAGATCTCCCCCGGATCAAGGCTCAGATTTTGA...AGCTTGCTTGAGTTGAAAGTTGTGAAACAGGGGAGACAGATTCCCCATGGTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR CCA 90 bp | CATACCTCTTCAGCCTCCAGTAGCTGTACTATCATTACACAAAACCCACTCCAGTTCCAAGCCTTGGGATaGAGGAGGGTTTCTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: HTSSASSSCTIITQNPLQFQALG*RRVSWA Trigger: AGCCCAAGAAACCCTCCTCCATCCCAAGGCTTGGAA...CTGGAGTGGGTTTTGTGTAATGATAGTACAGCTACTGGAGGCTGAAGAGGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR TCA 90 bp | CCTCTGATGAGGGAAGTATTCACTACTCTCCTATCTCCAAACACCAGGGGAGGCTCCATACACATCCAATaGTTCCAGAAAGTGGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: PLMREVFTTLLSPNTRGGSIHIQ*FQKVGS Trigger: ACTACCCACTTTCTGGAATCATTGGATGTGTATGGA...GCCTCCCCTGGTGTTTGGAGATAGGAGAGTAGTGAATACTTCCCTCATCAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR TCA 90 bp | CATACCTCTTCAGCCTCCAGTAGCTGTACTATCATTACACAAAACCCACTCCAGCGGTGCACTAACATTTaGCTAGTCACAGTGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: HTSSASSSCTIITQNPLQRCTNI*LVTVAA Trigger: TGCAGCCACTGTGACTAGTCAAATGTTAGTGCACCG...CTGGAGTGGGTTTTGTGTAATGATAGTACAGCTACTGGAGGCTGAAGAGGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR TCA 90 bp | GAGACCTATATCAGAGAGGACCATACTCTTGGGGTTCCATTGCTTCCTACAATAAAGCCATCTTCCATATaGTGCCACGTGACAGGCACC | + |
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Preference number: 4 (lower is better) Translates to: ETYIREDHTLGVPLLPTIKPSSI*CHVTGT Trigger: GGTGCCTGTCACGTGGCATCATATGGAAGATGGCTT...TATTGTAGGAAGCAATGGAACCCCAAGAGTATGGTCCTCTCTGATATAGGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR TCA 90 bp | TGTACCATGGGGAATCTGTCTCCCCTGTTTCACAACTTTCAACTCAAGCAAGCTGGGATTGTCCCAAAGTaGAGATCTTTCACCACAACA | + |
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Preference number: 4 (lower is better) Translates to: CTMGNLSPLFHNFQLKQAGIVPK*RSFTTT Trigger: TGTTGTGGTGAAAGATCTTCACTTTGGGACAATCCC...AGCTTGCTTGAGTTGAAAGTTGTGAAACAGGGGAGACAGATTCCCCATGGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR CCA 90 bp | TGTACCATGGGGAATCTGTCTCCCCTGTTTCACAACTTTCAACTCAAGCAAGCTATGGTTCCACCACCATaGAAGAAAATGATTCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: CTMGNLSPLFHNFQLKQAMVPPP*KKMIPS Trigger: GCTTGGAATCATTTTCTTCCATGGTGGTGGAACCAT...AGCTTGCTTGAGTTGAAAGTTGTGAAACAGGGGAGACAGATTCCCCATGGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR CCA 90 bp | TACTCAATTCAACTCAGAGACCTATATCAGAGAGGACCATACTCTTGGGGTTCCGTCATCTTTCATCACTaGGTACTTGTACATGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: YSIQLRDLYQRGPYSWGSVIFHH*VLVHGR Trigger: TCTCCCATGTACAAGTACCCAGTGATGAAAGATGAC...GGAACCCCAAGAGTATGGTCCTCTCTGATATAGGTCTCTGAGTTGAATTGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR CCA 90 bp | GAGACCTATATCAGAGAGGACCATACTCTTGGGGTTCCATTGCTTCCTACAATAATCCCAGGAGAGCAGTaGAATGTTTCTATTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: ETYIREDHTLGVPLLPTIIPGEQ*NVSILL Trigger: CAACAGAATAGAAACATTCCACTGCTCTCCTGGGAT...TATTGTAGGAAGCAATGGAACCCCAAGAGTATGGTCCTCTCTGATATAGGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR CCA 90 bp | GAAGGTCAGTCCATACCTCTTCAGCCTCCAGTAGCTGTACTATCATTACACAAACACAATGCAGGTTTCTaGGAGCTGAGATACTATACT | + |
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Preference number: 4 (lower is better) Translates to: EGQSIPLQPPVAVLSLHKHNAGF*ELRYYT Trigger: AGTATAGTATCTCAGCTCCCAGAAACCTGCATTGTG...TTTGTGTAATGATAGTACAGCTACTGGAGGCTGAAGAGGTATGGACTGACCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR GCA 90 bp | TTGAGACTGCTGAGGAAAATGAATATACCCATACAAGTTAGCCTAGATCTTGTAACTCACAGCTCACAATaGAGGTTTCTGGGAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LRLLRKMNIPIQVSLDLVTHSSQ*RFLGAE Trigger: CTCAGCTCCCAGAAACCTGCATTGTGAGCTGTGAGT...TACAAGATCTAGGCTAACTTGTATGGGTATATTCATTTTCCTCAGCAGTCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR CCA 90 bp | GAGACCTATATCAGAGAGGACCATACTCTTGGGGTTCCATTGCTTCCTACAATATTATATAAGAGAGAATaGTCCCGGAGAAGGTCATAC | + |
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Preference number: 4 (lower is better) Translates to: ETYIREDHTLGVPLLPTILYKRE*SRRRSY Trigger: GTATGACCTTCTCCGGGACCATTCTCTCTTATATAA...TATTGTAGGAAGCAATGGAACCCCAAGAGTATGGTCCTCTCTGATATAGGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR CAA 72 bp | TCAACTCAGAGACCTATATCAGAGAGGACCATACTCTaGGGGTTCCATTGCTTCCTACAATACATGTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: STQRPISERTIL*GFHCFLQYMFS Trigger: TGAAAACATGTATTGTAGGAAGCAATGGAACCCCAAGAGTATGGTCCTCTCTGATATAGGTCTCTGAGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR TCA 90 bp | GGACCATACTCTTGGGGTTCCATTGCTTCCTACAATACATGTTTTCAGTGGCTACATGTCATTGTCAGATaGAATAAGCAACTGAGGATT | + |
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Preference number: 4 (lower is better) Translates to: GPYSWGSIASYNTCFQWLHVIVR*NKQLRI Trigger: AATCCTCAGTTGCTTATTTCATCTGACAATGACATG...TAGCCACTGAAAACATGTATTGTAGGAAGCAATGGAACCCCAAGAGTATGGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR CCA 90 bp | AGAGACCTATATCAGAGAGGACCATACTCTTGGGGTTCCATTGCTTCCTACAATAGGATCTCTCTTCAGTaGTTTCAGATCATGCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: RDLYQRGPYSWGSIASYNRISLQ*FQIMQK Trigger: TTTTTGCATGATCTGAAACCACTGAAGAGAGATCCT...ATTGTAGGAAGCAATGGAACCCCAAGAGTATGGTCCTCTCTGATATAGGTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR TCA 90 bp | CTCCACTATACACAATTTAGAAAACCAGTAGAAACAGTGAGTTGCTGTAAAACTCACCATGGAAGAAAATaGTTCCAAGCCTTGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: LHYTQFRKPVETVSCCKTHHGRK*FQALGW Trigger: CCATCCCAAGGCTTGGAATCATTTTCTTCCATGGTG...AGTTTTACAGCAACTCACTGTTTCTACTGGTTTTCTAAATTGTGTATAGTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| 3UTR CAA 72 bp | TCAGAACAAATAGTTCACAAGAACACATCTGTTCCATaGGCTCTTTTTAGAATTCCCACTGTGAATGTGATC | + |
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Preference number: 4 (lower is better) Translates to: SEQIVHKNTSVP*ALFRIPTVNVI Trigger: GATCACATTCACAGTGGGAATTCTAAAAAGAGCCAATGGAACAGATGTGTTCTTGTGAACTATTTGTTCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS GCA 90 bp | GGATGTGTTCAGTCCAGAAGTGTTTGCCGACCACCCACAGCAGACTaGCCAGTGAGAACACAGCAACTGAACCTACAAGGAGTGTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: GCVQSRSVCRPPTAD*PVRTQQLNLQGVSG Trigger: CCCTGACACTCCTTGTAGGTTCAGTTGCTGTGTTCTCACTGGGCAGTCTGCTGTGGGTGGTCGGCAAACACTTCTGGACTGAACACATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS TCA 90 bp | ACCACAGGTCACCACTCGAGCTGGATCCACTCCATACACATCCAATaGTTCCAGAAAGTGGGTAGTGGCTACTACACAGTCATCTTTCAT | + |
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Preference number: 5 (lower is better) Translates to: TTGHHSSWIHSIHIQ*FQKVGSGYYTVIFH Trigger: ATGAAAGATGACTGTGTAGTAGCCACTACCCACTTTCTGGAATCATTGGATGTGTATGGAGTGGATCCAGCTCGAGTGGTGACCTGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS CCA 90 bp | ACAGGCACCCCCAGATCTTCTAGCCTCTTCTTATATAAGAGAGAATaGTCCCGGAGAAGGTCATACTCACAGCTCACAATGCAGGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: TGTPRSSSLFLYKRE*SRRRSYSQLTMQVS Trigger: AGAAACCTGCATTGTGAGCTGTGAGTATGACCTTCTCCGGGACCATTCTCTCTTATATAAGAAGAGGCTAGAAGATCTGGGGGTGCCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS GCA 90 bp | GCACCTAGCCACTTTCTGTATTTCTCCCAGACGTCCGGAGGCAAATaGATCCCATTCTTTACGACACTTTTCCAGGAAATGTTCACATCT | + |
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Preference number: 5 (lower is better) Translates to: APSHFLYFSQTSGGK*IPFFTTLFQEMFTS Trigger: AGATGTGAACATTTCCTGGAAAAGTGTCGTAAAGAATGGGATGCATTTGCCTCCGGACGTCTGGGAGAAATACAGAAAGTGGCTAGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS CCA 90 bp | ACTCGAGCTGGATCCACTCCATACACATCCAATGATTCCAGAAAGTaGGTAGTGGCTACTACACAGTCATCTTTCATCACTGGGTACTTG | + |
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Preference number: 5 (lower is better) Translates to: TRAGSTPYTSNDSRK*VVATTQSSFITGYL Trigger: CAAGTACCCAGTGATGAAAGATGACTGTGTAGTAGCCACTACCCACTTTCTGGAATCATTGGATGTGTATGGAGTGGATCCAGCTCGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR CAA 90 bp | TGTCTCCCCTGTTTCACAACTTTCAACTCAAGCAAGCTAGGCATCCATAGGCTGAAAGCTTCACAGGGATaGTCCCAAAGTGAAGATCTT | + |
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Preference number: 5 (lower is better) Translates to: CLPCFTTFNSSKLGIHRLKASQG*SQSEDL Trigger: AAGATCTTCACTTTGGGACAATCCCTGTGAAGCTTT...CAGCCTATGGATGCCTAGCTTGCTTGAGTTGAAAGTTGTGAAACAGGGGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS TCA 90 bp | CAATGCAGGTTTCTGGGAGCTGAGATACTATACTGTCTTCTGAGATaGGGGGTGAGCAGGTATAGTTCAGTGAACGTTTTATCTCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: QCRFLGAEILYCLLR*GVSRYSSVNVLSLG Trigger: ACCAAGAGATAAAACGTTCACTGAACTATACCTGCTCACCCCTCATCTCAGAAGACAGTATAGTATCTCAGCTCCCAGAAACCTGCATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR CAA 90 bp | CAGGCTGAAGACATACTCAATTCAACTCAGAGACCTATATCAGAGAGGACCATAACAGAGTCACACTCCTaGGACAAACGCAAGCATATG | + |
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Preference number: 5 (lower is better) Translates to: QAEDILNSTQRPISERTITESHS*DKRKHM Trigger: CATATGCTTGCGTTTGTCCAAGGAGTGTGACTCTGT...TATGGTCCTCTCTGATATAGGTCTCTGAGTTGAATTGAGTATGTCTTCAGCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS-3UTR CAA 90 bp | GGACCATACTCTTGGGGTTCCATTGCTTCCTACAATACATGTTTTCAGTGGCTAAATGTTTCTATTCTGTaGATAAGAGGGGCTCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: GPYSWGSIASYNTCFQWLNVSIL*IRGAPK Trigger: TTTGGGAGCCCCTCTTATCAACAGAATAGAAACATT...TAGCCACTGAAAACATGTATTGTAGGAAGCAATGGAACCCCAAGAGTATGGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS CAA 72 bp | GTGATGCCTTCAGGGATGTGTTCAGTCCAGAAGTGTTaGCCGACCACCCACAGCAGACTGCCCAGTGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: VMPSGMCSVQKC*PTTHSRLPSEN Trigger: GTTCTCACTGGGCAGTCTGCTGTGGGTGGTCGGCAAACACTTCTGGACTGAACACATCCCTGAAGGCATCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS TCA 72 bp | AGGGCACTAAGCACTCCATGGAAGCCATCTTCCATATaGTGCCACGTGACAGGCACCCCCAGATCTTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: RALSTPWKPSSI*CHVTGTPRSSS Trigger: GCTAGAAGATCTGGGGGTGCCTGTCACGTGGCATCATATGGAAGATGGCTTCCATGGAGTGCTTAGTGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS GCA 72 bp | CAGTCCAGAAGTGTTTGCCGACCACCCACAGCAGACTaGCCAGTGAGAACACAGCAACTGAACCTACAAGGA | + |
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Preference number: 6 (lower is better) Translates to: QSRSVCRPPTAD*PVRTQQLNLQG Trigger: TCCTTGTAGGTTCAGTTGCTGTGTTCTCACTGGGCAGTCTGCTGTGGGTGGTCGGCAAACACTTCTGGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS TCA 72 bp | TTGATCCGGGGGAGATCTGGTCGGTGCACTAACATTTaGCTAGTCACAGTGGCTGCAGTTCCTCCTACACTG | + |
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Preference number: 6 (lower is better) Translates to: LIRGRSGRCTNI*LVTVAAVPPTL Trigger: CAGTGTAGGAGGAACTGCAGCCACTGTGACTAGTCAAATGTTAGTGCACCGACCAGATCTCCCCCGGATCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS TCA 72 bp | GCACTCCATGGAAGCCATCTTCCATATGATGCCACGTaGCAGGCACCCCCAGATCTTCTAGCCTCTTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: ALHGSHLPYDAT*QAPPDLLASSY Trigger: ATAAGAAGAGGCTAGAAGATCTGGGGGTGCCTGTCACGTGGCATCATATGGAAGATGGCTTCCATGGAGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS TCA 72 bp | CACCACTCGAGCTGGATCCACTCCATACACATCCAATaGTTCCAGAAAGTGGGTAGTGGCTACTACACAGTC | + |
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Preference number: 6 (lower is better) Translates to: HHSSWIHSIHIQ*FQKVGSGYYTV Trigger: GACTGTGTAGTAGCCACTACCCACTTTCTGGAATCATTGGATGTGTATGGAGTGGATCCAGCTCGAGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS CCA 72 bp | TCACACTCCTTGGACAAACGCAAGCATATGCTGTTGTaGGTTCTCAAGCTCCCTATGATGGTTCCACCACCA | + |
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Preference number: 6 (lower is better) Translates to: SHSLDKRKHMLL*VLKLPMMVPPP Trigger: TGGTGGTGGAACCATCATAGGGAGCTTGAGAACCCACAACAGCATATGCTTGCGTTTGTCCAAGGAGTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS CAA 72 bp | GAGTCACACTCCTTGGACAAACGCAAGCATATGCTGTaGTGGGTTCTCAAGCTCCCTATGATGGTTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: ESHSLDKRKHML*WVLKLPMMVPP Trigger: TGGTGGAACCATCATAGGGAGCTTGAGAACCCACAACAGCATATGCTTGCGTTTGTCCAAGGAGTGTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS CAA 90 bp | TTGGGATGGAGGAGGGTTTCTTGGGCTTGTAAAGCTTCACAGGGATaGTCCCAAAGTGAAGATCTTTCACCACAACATCAGGATCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LGWRRVSWACKASQG*SQSEDLSPQHQDLS Trigger: AGAGAGATCCTGATGTTGTGGTGAAAGATCTTCACTTTGGGACAATCCCTGTGAAGCTTTACAAGCCCAAGAAACCCTCCTCCATCCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS TCA 72 bp | TCATACTCACAGCTCACAATGCAGGTTTCTGGGAGCTaGGATACTATACTGTCTTCTGAGATGAGGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: SYSQLTMQVSGS*DTILSSEMRGE Trigger: CTCACCCCTCATCTCAGAAGACAGTATAGTATCTCAGCTCCCAGAAACCTGCATTGTGAGCTGTGAGTATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS GCA 72 bp | CACTTTCTGTATTTCTCCCAGACGTCCGGAGGCAAATaGATCCCATTCTTTACGACACTTTTCCAGGAAATG | + |
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Preference number: 6 (lower is better) Translates to: HFLYFSQTSGGK*IPFFTTLFQEM Trigger: CATTTCCTGGAAAAGTGTCGTAAAGAATGGGATGCATTTGCCTCCGGACGTCTGGGAGAAATACAGAAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS CCA 72 bp | GGATCCACTCCATACACATCCAATGATTCCAGAAAGTaGGTAGTGGCTACTACACAGTCATCTTTCATCACT | + |
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Preference number: 6 (lower is better) Translates to: GSTPYTSNDSRK*VVATTQSSFIT Trigger: AGTGATGAAAGATGACTGTGTAGTAGCCACTACCCACTTTCTGGAATCATTGGATGTGTATGGAGTGGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS CAA 72 bp | GTGGCTACTACACAGTCATCTTTCATCACTGGGTACTaGTACATGGGAGATTTCCTGTATCCAACTGAAACG | + |
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Preference number: 6 (lower is better) Translates to: VATTQSSFITGY*YMGDFLYPTET Trigger: CGTTTCAGTTGGATACAGGAAATCTCCCATGTACAAGTACCCAGTGATGAAAGATGACTGTGTAGTAGCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS TCA 72 bp | TTTCTGGGAGCTGAGATACTATACTGTCTTCTGAGATaGGGGGTGAGCAGGTATAGTTCAGTGAACGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: FLGAEILYCLLR*GVSRYSSVNVL Trigger: TAAAACGTTCACTGAACTATACCTGCTCACCCCTCATCTCAGAAGACAGTATAGTATCTCAGCTCCCAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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| CDS CCA 72 bp | CTACACAGTCATCTTTCATCACTGGGTACTTGTACATaGGAGATTTCCTGTATCCAACTGAAACGACAACAG | + |
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Preference number: 6 (lower is better) Translates to: LHSHLSSLGTCT*EISCIQLKRQQ Trigger: CTGTTGTCGTTTCAGTTGGATACAGGAAATCTCCCATGTACAAGTACCCAGTGATGAAAGATGACTGTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105749.2 |
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