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Pregenerated sensors for AADACL2FM3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095522

Ensembl transcript IDs: ENSMUST00000179799.2

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp ATTGCTACCTTCCTTGTCAGAAAGGGACCATGCTTATATTCTCTATaGGATGGCATTAAGGTATCAAGTGCCTGTAGTGCAGGATATAGC +
Preference number: 5 (lower is better)
Translates to: IATFLVRKGPCLYSL*DGIKVSSACSAGYS
Trigger: GCTATATCCTGCACTACAGGCACTTGATACCTTAATGCCATCTCATAGAGAATATAAGCATGGTCCCTTTCTGACAAGGAAGGTAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179799.2
CDS TCA 90 bp TTCAGGAAGGAAGTCACTCCAGTTAACAAACTTGAACAAATGTCTTaGCTCTTGAGGTACATGAGCATTTCTCAGTATTGTCTTGGGCAA +
Preference number: 5 (lower is better)
Translates to: FRKEVTPVNKLEQMS*LLRYMSISQYCLGQ
Trigger: TTGCCCAAGACAATACTGAGAAATGCTCATGTACCTCAAGAGTCAAGACATTTGTTCAAGTTTGTTAACTGGAGTGACTTCCTTCCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179799.2
CDS TCA 90 bp GATCCACTCCATATTTTGCAAGAACTTTATCCTGAAGAAAGAACTTaGTCACAAAAATGCAATCTTCAAGGGCAGCTGGAAATAGATGCT +
Preference number: 5 (lower is better)
Translates to: DPLHILQELYPEERT*SQKCNLQGQLEIDA
Trigger: AGCATCTATTTCCAGCTGCCCTTGAAGATTGCATTTTTGTGATCAAGTTCTTTCTTCAGGATAAAGTTCTTGCAAAATATGGAGTGGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179799.2
CDS TCA 72 bp CACTGTTGCTGCCAAGGTGCCCCCAGAACTGTCTCCTaGAATACAGATGCGAGTGGGATCCACTCCATATTT +
Preference number: 6 (lower is better)
Translates to: HCCCQGAPRTVS*NTDASGIHSIF
Trigger: AAATATGGAGTGGATCCCACTCGCATCTGTATTTCAGGAGACAGTTCTGGGGGCACCTTGGCAGCAACAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179799.2
CDS TCA 72 bp TTCCTTGTCAGAAAGGGACCATGCTTATATTCTCTATaGGATGGCATTAAGGTATCAAGTGCCTGTAGTGCA +
Preference number: 6 (lower is better)
Translates to: FLVRKGPCLYSL*DGIKVSSACSA
Trigger: TGCACTACAGGCACTTGATACCTTAATGCCATCTCATAGAGAATATAAGCATGGTCCCTTTCTGACAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179799.2
CDS CAA 72 bp AAAATCACAGCTGGTCTCTGTTTTTCAGACTTCCTTTaGGGTAAATACAGACGAACAGGGATGTCACTGAAG +
Preference number: 6 (lower is better)
Translates to: KITAGLCFSDFL*GKYRRTGMSLK
Trigger: CTTCAGTGACATCCCTGTTCGTCTGTATTTACCCAAAAGGAAGTCTGAAAAACAGAGACCAGCTGTGATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179799.2
CDS TCA 72 bp TGTAAGTTAATGGCAATTTCTGTAACTGGGAATCGTTaGCTAACAAAGGTGATGCCCTACTATCCACAAGTC +
Preference number: 6 (lower is better)
Translates to: CKLMAISVTGNR*LTKVMPYYPQV
Trigger: GACTTGTGGATAGTAGGGCATCACCTTTGTTAGTCAACGATTCCCAGTTACAGAAATTGCCATTAACTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179799.2
CDS TCA 72 bp AAGACCCATATTTTCCAACAATGTACCCATAAGTGCTaGTATTTTCATGCCAGCATCTATGACTCGCACTTT +
Preference number: 6 (lower is better)
Translates to: KTHIFQQCTHKC*YFHASIYDSHF
Trigger: AAAGTGCGAGTCATAGATGCTGGCATGAAAATATCAGCACTTATGGGTACATTGTTGGAAAATATGGGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179799.2
CDS CCA 72 bp TATTTTCATGCCAGCATCTATGACTCGCACTTTCCATaGCTCTTCAATGTTTTCTGGTATGGGTATATAAGT +
Preference number: 6 (lower is better)
Translates to: YFHASIYDSHFP*LFNVFWYGYIS
Trigger: ACTTATATACCCATACCAGAAAACATTGAAGAGCCATGGAAAGTGCGAGTCATAGATGCTGGCATGAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179799.2
CDS TCA 72 bp GAAGTCACTCCAGTTAACAAACTTGAACAAATGTCTTaGCTCTTGAGGTACATGAGCATTTCTCAGTATTGT +
Preference number: 6 (lower is better)
Translates to: EVTPVNKLEQMS*LLRYMSISQYC
Trigger: ACAATACTGAGAAATGCTCATGTACCTCAAGAGTCAAGACATTTGTTCAAGTTTGTTAACTGGAGTGACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179799.2
CDS CCA 72 bp TATGACTCGCACTTTCCATGGCTCTTCAATGTTTTCTaGTATGGGTATATAAGTATGATAAGCAAGGAAGAT +
Preference number: 6 (lower is better)
Translates to: YDSHFPWLFNVF*YGYISMISKED
Trigger: ATCTTCCTTGCTTATCATACTTATATACCCATACCAGAAAACATTGAAGAGCCATGGAAAGTGCGAGTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179799.2
CDS TCA 72 bp CATATTTTGCAAGAACTTTATCCTGAAGAAAGAACTTaGTCACAAAAATGCAATCTTCAAGGGCAGCTGGAA +
Preference number: 6 (lower is better)
Translates to: HILQELYPEERT*SQKCNLQGQLE
Trigger: TTCCAGCTGCCCTTGAAGATTGCATTTTTGTGATCAAGTTCTTTCTTCAGGATAAAGTTCTTGCAAAATATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179799.2
CDS CAA 72 bp GTCTTGACTCTTGAGGTACATGAGCATTTCTCAGTATaGTCTTGGGCAATTCTTTATCTTCTGATAAATATA +
Preference number: 6 (lower is better)
Translates to: VLTLEVHEHFSV*SWAILYLLINI
Trigger: TATATTTATCAGAAGATAAAGAATTGCCCAAGACAATACTGAGAAATGCTCATGTACCTCAAGAGTCAAGAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179799.2