Pregenerated sensors for AADACL2FM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036951Ensembl transcript IDs: ENSMUST00000049476.3
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATAAACCGACCTGGTCTTGCACTCACAGAAATCTGTCAACCTGATTaGCTCTCTGCCACTGGGGTGCTGGAGAGTAATGTGCCAACCCAT | + |
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Preference number: 1 (lower is better) Translates to: INRPGLALTEICQPD*LSATGVLESNVPTH Trigger: ATGGGTTGGCACATTACTCTCCAGCACCCCAGTGGCAGAGAGGCAATCAGGTTGACAGATTTCTGTGAGTGCAAGACCAGGTCGGTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| 3UTR TCA 90 bp | TCACAGGGAAGCAAACATGTCTGGAGATCAACTCACATAACTCTCTaGATATACAGTCTCTGTGTGCACAATGCTTCATTACAAAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: SQGSKHVWRSTHITL*IYSLCVHNASLQKF Trigger: GAACTTTTGTAATGAAGCATTGTGCACACAGAGACTGTATATTCAGAGAGTTATGTGAGTTGATCTCCAGACATGTTTGCTTCCCTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| 3UTR-3UTR CCA 90 bp | TTTGTGTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTCTGGCTGCCACTGGGGTGCTaGAGAGTAATGTGCCAACCC | + |
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Preference number: 2 (lower is better) Translates to: FVFTAVCVLSSQGSKHVWLPLGC*RVMCQP Trigger: GGGTTGGCACATTACTCTCCAGCACCCCAGTGGCAG...CCAGACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAACACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| 3UTR-3UTR GCA 90 bp | TTTGTGTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTCTGGTCTCTGCCACTGGGGTaGTGGAGAGTAATGTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: FVFTAVCVLSSQGSKHVWSLPLG*WRVMCQ Trigger: TTGGCACATTACTCTCCAGCACCCCAGTGGCAGAGA...CCAGACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAACACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| 3UTR-3UTR GCA 90 bp | TTTGTGTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTCTGGATCTGTCAACCTGATTaGCTCTCTGCCACTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: FVFTAVCVLSSQGSKHVWICQPD*LSATGV Trigger: CACCCCAGTGGCAGAGAGGCAATCAGGTTGACAGAT...CCAGACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAACACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| 3UTR-3UTR GCA 90 bp | TGTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTCTGGAGATAAACCGACCTGGTCTTaGACTCACAGAAATCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: CLQQYVFYHHREANMSGDKPTWS*THRNLS Trigger: TGACAGATTTCTGTGAGTGCAAGACCAGGTCGGTTT...ATCTCCAGACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTCCAACAACCATACACAAGGAGCAGAATTACCAGCACATCACAAAACTGAAGGAAGCAAACATGTCTaGAGATCAACTCACATAACT | + |
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Preference number: 2 (lower is better) Translates to: MSNNHTQGAELPAHHKTEGSKHV*RSTHIT Trigger: AGTTATGTGAGTTGATCTCCAGACATGTTTGCTTCC...TTCAGTTTTGTGATGTGCTGGTAATTCTGCTCCTTGTGTATGGTTGTTGGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTCTGGAGATCTATACAGTCTCTGTGTaGACAATGCTTCATTACAAA | + |
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Preference number: 2 (lower is better) Translates to: VYSSMCSIITGKQTCLEIYTVSV*TMLHYK Trigger: TTTGTAATGAAGCATTGTGCACACAGAGACTGTATA...GATCTCCAGACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGCATTGTCCCACAATAAATACAATCCACATAGGTTTCCATCAAATTTGATGAAATTTCATGGGGAGTaGGTGAAGACAACAACTAAT | + |
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Preference number: 2 (lower is better) Translates to: EALSHNKYNPHRFPSNLMKFHGE*VKTTTN Trigger: ATTAGTTGTTGTCTTCACTCACTCCCCATGAAATTT...CATCAAATTTGATGGAAACCTATGTGGATTGTATTTATTGTGGGACAATGCCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| 3UTR-3UTR GCA 90 bp | GAGGCATTGTCCCACAATAAATACAATCCACATAGGTTTCCATCAAATTTGATGAGTCACTTAATTTTGTaGCCATTTGTAACCGTCACA | + |
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Preference number: 2 (lower is better) Translates to: EALSHNKYNPHRFPSNLMSHLIL*PFVTVT Trigger: TGTGACGGTTACAAATGGGCACAAAATTAAGTGACT...CATCAAATTTGATGGAAACCTATGTGGATTGTATTTATTGTGGGACAATGCCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| 3UTR-3UTR TCA 90 bp | AATGCTCAATCCATACAAATGTCATTAGAATTGTACCTTTTTGCACTTCTCCTCGTCACATTTCTTTATTaGTTACCCAGCTACATGCTT | + |
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Preference number: 2 (lower is better) Translates to: NAQSIQMSLELYLFALLLVTFLY*LPSYML Trigger: AAGCATGTAGCTGGGTAATCAATAAAGAAATGTGAC...GAGGAGAAGTGCAAAAAGGTACAATTCTAATGACATTTGTATGGATTGAGCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| 3UTR GCA 72 bp | CCTGGTCTTGCACTCACAGAAATCTGTCAACCTGATTaGCTCTCTGCCACTGGGGTGCTGGAGAGTAATGTG | + |
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Preference number: 3 (lower is better) Translates to: PGLALTEICQPD*LSATGVLESNV Trigger: CACATTACTCTCCAGCACCCCAGTGGCAGAGAGGCAATCAGGTTGACAGATTTCTGTGAGTGCAAGACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| 3UTR-3UTR CAA 90 bp | TTTGTGTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTCTGGCGTCACATTTCTTTATaGATTACCCAGCTACATGCT | + |
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Preference number: 3 (lower is better) Translates to: FVFTAVCVLSSQGSKHVWRHISL*ITQLHA Trigger: AGCATGTAGCTGGGTAATCAATAAAGAAATGTGACG...CCAGACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAACACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| 3UTR-3UTR CAA 90 bp | GAGGCATTGTCCCACAATAAATACAATCCACATAGGTTTCCATCAAATTTGATGCAAGACATTCCAAATTaGGCTTACCACTGCCATGAA | + |
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Preference number: 3 (lower is better) Translates to: EALSHNKYNPHRFPSNLMQDIPN*AYHCHE Trigger: TTCATGGCAGTGGTAAGCCAAATTTGGAATGTCTTG...CATCAAATTTGATGGAAACCTATGTGGATTGTATTTATTGTGGGACAATGCCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| 3UTR TCA 72 bp | AGCAAACATGTCTGGAGATCAACTCACATAACTCTCTaGATATACAGTCTCTGTGTGCACAATGCTTCATTA | + |
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Preference number: 3 (lower is better) Translates to: SKHVWRSTHITL*IYSLCVHNASL Trigger: TAATGAAGCATTGTGCACACAGAGACTGTATATTCAGAGAGTTATGTGAGTTGATCTCCAGACATGTTTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR GCA 90 bp | GTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTCTGGAGATCCAGTTGAGTCACTGTTaGTGCCAAGGTACCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: VYSSMCSIITGKQTCLEIQLSHC*CQGTPR Trigger: TCTGGGGGTACCTTGGCAGCAACAGTGACTCAACTG...GATCTCCAGACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR GCA 90 bp | GTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTCTGGAGATCTTGAGTCACTGTTGCTaGCAAGGTACCCCCAGAACT | + |
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Preference number: 4 (lower is better) Translates to: VYSSMCSIITGKQTCLEILSHCC*QGTPRT Trigger: AGTTCTGGGGGTACCTTGGCAGCAACAGTGACTCAA...GATCTCCAGACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR CCA 90 bp | TGTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTCTGGAGATAAGGGCAGCTGGGAATaGATACTTAGGAGCAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: CLQQYVFYHHREANMSGDKGSWE*ILRSKP Trigger: AGGCTTGCTCCTAAGTATCCATTCCCAGCTGCCCTT...ATCTCCAGACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR TCA 90 bp | TTTGTGTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTCTGGTCATTCTGTAGCAGTTaGGTCACTGTTGCTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: FVFTAVCVLSSQGSKHVWSFCSS*VTVAAK Trigger: CTTGGCAGCAACAGTGACTCAACTGCTACAGAATGA...CCAGACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAACACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR GCA 90 bp | TTGATTTGTGTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTGACTCTGTTGGCATATaGTCATTTCTCAGTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LICVYSSMCSIITGKQTCDSVGI*SFLSAA Trigger: GGCTGCACTGAGAAATGAGCATATGCCAACAGAGTC...ACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAACACAAATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR CCA 90 bp | AATGCTCAATCCATACAAATGTCATTAGAATTGTACCTTTTTGCACTTCTCCTCGTCTTCAAGGGCAGCTaGGAATGGATACTTAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: NAQSIQMSLELYLFALLLVFKGS*EWILRS Trigger: GCTCCTAAGTATCCATTCCCAGCTGCCCTTGAAGAC...GAGGAGAAGTGCAAAAAGGTACAATTCTAATGACATTTGTATGGATTGAGCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR CCA 90 bp | TGTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTCTGGAGATTTTCTCAGTGCAGCCTaGAGTAGAACTTTGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: CLQQYVFYHHREANMSGDFLSAA*SRTLSS Trigger: TGAAGACAAAGTTCTACTCCAGGCTGCACTGAGAAA...ATCTCCAGACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR CCA 90 bp | GTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTCTGGAGATCGGCAAACTCTGTAACTaGGTGTCATTGAATAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: VYSSMCSIITGKQTCLEIGKLCN*VSLNSK Trigger: TTTGCTATTCAATGACACCCAGTTACAGAGTTTGCC...GATCTCCAGACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR GCA 90 bp | TTGATTTGTGTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTGCAAAGGGGACAATCTaGTATCCACAAGTACTGGAT | + |
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Preference number: 4 (lower is better) Translates to: LICVYSSMCSIITGKQTCAKGTI*YPQVLD Trigger: ATCCAGTACTTGTGGATAGCAGATTGTCCCCTTTGC...ACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAACACAAATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR TCA 90 bp | AATGCTCAATCCATACAAATGTCATTAGAATTGTACCTTTTTGCACTTCTCCTCGTAACTGGGTGTCATTaGATAGCAAAGGGGACAATC | + |
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Preference number: 4 (lower is better) Translates to: NAQSIQMSLELYLFALLLVTGCH*IAKGTI Trigger: GATTGTCCCCTTTGCTATTCAATGACACCCAGTTAC...GAGGAGAAGTGCAAAAAGGTACAATTCTAATGACATTTGTATGGATTGAGCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR GCA 90 bp | GAGGCATTGTCCCACAATAAATACAATCCACATAGGTTTCCATCAAATTTGATGAGCATCAAGCTTGTTTaGTGTCCATCTGTTCAGATC | + |
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Preference number: 4 (lower is better) Translates to: EALSHNKYNPHRFPSNLMSIKLV*CPSVQI Trigger: GATCTGAACAGATGGACAGCAAACAAGCTTGATGCT...CATCAAATTTGATGGAAACCTATGTGGATTGTATTTATTGTGGGACAATGCCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR CCA 90 bp | AATGCTCAATCCATACAAATGTCATTAGAATTGTACCTTTTTGCACTTCTCCTCCTCCCTGGTCAGAATTaGACCATGTTGATACTCTTG | + |
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Preference number: 4 (lower is better) Translates to: NAQSIQMSLELYLFALLLLPGQN*TMLILL Trigger: CAAGAGTATCAACATGGTCCAATTCTGACCAGGGAG...GAGGAGAAGTGCAAAAAGGTACAATTCTAATGACATTTGTATGGATTGAGCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR TCA 90 bp | GAGGCATTGTCCCACAATAAATACAATCCACATAGGTTTCCATCAAATTTGATGTTCTCTATATGCTCATaGGTAACTTTCACCCCAACA | + |
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Preference number: 4 (lower is better) Translates to: EALSHNKYNPHRFPSNLMFSICS*VTFTPT Trigger: TGTTGGGGTGAAAGTTACTCATGAGCATATAGAGAA...CATCAAATTTGATGGAAACCTATGTGGATTGTATTTATTGTGGGACAATGCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS CCA 90 bp | AAAGAACTTGATCGTATAAACACAGTCTTCAAGGGCAGCTGGGAATaGATACTTAGGAGCAAGCCTGTAGTCTATCCCCACAACAACAGC | + |
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Preference number: 5 (lower is better) Translates to: KELDRINTVFKGSWE*ILRSKPVVYPHNNS Trigger: GCTGTTGTTGTGGGGATAGACTACAGGCTTGCTCCTAAGTATCCATTCCCAGCTGCCCTTGAAGACTGTGTTTATACGATCAAGTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS CCA 90 bp | CTGAAGAAAGAACTTGATCGTATAAACACAGTCTTCAAGGGCAGCTaGGAATGGATACTTAGGAGCAAGCCTGTAGTCTATCCCCACAAC | + |
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Preference number: 5 (lower is better) Translates to: LKKELDRINTVFKGS*EWILRSKPVVYPHN Trigger: GTTGTGGGGATAGACTACAGGCTTGCTCCTAAGTATCCATTCCCAGCTGCCCTTGAAGACTGTGTTTATACGATCAAGTTCTTTCTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS GCA 90 bp | CTCCAGTTAACAAACTTGAACAGGTGTCTTGACTCTGTTGGCATATaGTCATTTCTCAGTGCAGCCTGGAGTAGAACTTTGTCTTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: LQLTNLNRCLDSVGI*SFLSAAWSRTLSSV Trigger: GACTGAAGACAAAGTTCTACTCCAGGCTGCACTGAGAAATGAGCATATGCCAACAGAGTCAAGACACCTGTTCAAGTTTGTTAACTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR CAA 90 bp | GTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTCTGGAGATCCAGCATCAAGCTTGTTaGCTGTCCATCTGTTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: VYSSMCSIITGKQTCLEIQHQAC*LSICSD Trigger: ATCTGAACAGATGGACAGCAAACAAGCTTGATGCTG...GATCTCCAGACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR CAA 90 bp | ATGTCCAACAACCATACACAAGGAGCAGAATTACCAGCACATCACAAAACTGAATGTAACTGGGTGTCATaGAATAGCAAAGGGGACAAT | + |
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Preference number: 5 (lower is better) Translates to: MSNNHTQGAELPAHHKTECNWVS*NSKGDN Trigger: ATTGTCCCCTTTGCTATTCAATGACACCCAGTTACA...TTCAGTTTTGTGATGTGCTGGTAATTCTGCTCCTTGTGTATGGTTGTTGGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS CCA 90 bp | TCATGTTCACAAGTGACAATGTATGTTAATGGCAAACTCTGTAACTaGGTGTCATTGAATAGCAAAGGGGACAATCTGCTATCCACAAGT | + |
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Preference number: 5 (lower is better) Translates to: SCSQVTMYVNGKLCN*VSLNSKGDNLLSTS Trigger: ACTTGTGGATAGCAGATTGTCCCCTTTGCTATTCAATGACACCCAGTTACAGAGTTTGCCATTAACATACATTGTCACTTGTGAACATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR CAA 90 bp | GAGGCATTGTCCCACAATAAATACAATCCACATAGGTTTCCATCAAATTTGATGTCTCCCTGGTCAGAATaGGACCATGTTGATACTCTT | + |
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Preference number: 5 (lower is better) Translates to: EALSHNKYNPHRFPSNLMSPWSE*DHVDTL Trigger: AAGAGTATCAACATGGTCCAATTCTGACCAGGGAGA...CATCAAATTTGATGGAAACCTATGTGGATTGTATTTATTGTGGGACAATGCCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS-3UTR CAA 90 bp | TTGATTTGTGTTTACAGCAGTATGTGTTCTATCATCACAGGGAAGCAAACATGTCTCCAGTTAACAAACTaGAACAGGTGTCTTGACTCT | + |
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Preference number: 5 (lower is better) Translates to: LICVYSSMCSIITGKQTCLQLTN*NRCLDS Trigger: AGAGTCAAGACACCTGTTCAAGTTTGTTAACTGGAG...ACATGTTTGCTTCCCTGTGATGATAGAACACATACTGCTGTAAACACAAATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS CCA 90 bp | GCTATCCACAAGTACTGGATAGGAAGCATTCAATTTTCCAAGAATTaGTTCAGTGTAAACGTAGTTCTTTTTGTACTTCTCAGGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: AIHKYWIGSIQFSKN*FSVNVVLFVLLRKE Trigger: TTCCTTCCTGAGAAGTACAAAAAGAACTACGTTTACACTGAACCAATTCTTGGAAAATTGAATGCTTCCTATCCAGTACTTGTGGATAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS TCA 72 bp | GAAGTCACTCCAGTTAACAAACTTGAACAGGTGTCTTaGCTCTGTTGGCATATGCTCATTTCTCAGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: EVTPVNKLEQVS*LCWHMLISQCS Trigger: GCTGCACTGAGAAATGAGCATATGCCAACAGAGTCAAGACACCTGTTCAAGTTTGTTAACTGGAGTGACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS GCA 72 bp | ACAAACTTGAACAGGTGTCTTGACTCTGTTGGCATATaGTCATTTCTCAGTGCAGCCTGGAGTAGAACTTTG | + |
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Preference number: 6 (lower is better) Translates to: TNLNRCLDSVGI*SFLSAAWSRTL Trigger: CAAAGTTCTACTCCAGGCTGCACTGAGAAATGAGCATATGCCAACAGAGTCAAGACACCTGTTCAAGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS CCA 72 bp | GAACTTGATCGTATAAACACAGTCTTCAAGGGCAGCTaGGAATGGATACTTAGGAGCAAGCCTGTAGTCTAT | + |
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Preference number: 6 (lower is better) Translates to: ELDRINTVFKGS*EWILRSKPVVY Trigger: ATAGACTACAGGCTTGCTCCTAAGTATCCATTCCCAGCTGCCCTTGAAGACTGTGTTTATACGATCAAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS CCA 72 bp | GACTCTGTTGGCATATGCTCATTTCTCAGTGCAGCCTaGAGTAGAACTTTGTCTTCAGTCACATATAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: DSVGICSFLSAA*SRTLSSVTYRH Trigger: ATGCCTATATGTGACTGAAGACAAAGTTCTACTCCAGGCTGCACTGAGAAATGAGCATATGCCAACAGAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS CAA 72 bp | TACTTCTCAGGAAGGAAGTCACTCCAGTTAACAAACTaGAACAGGTGTCTTGACTCTGTTGGCATATGCTCA | + |
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Preference number: 6 (lower is better) Translates to: YFSGRKSLQLTN*NRCLDSVGICS Trigger: TGAGCATATGCCAACAGAGTCAAGACACCTGTTCAAGTTTGTTAACTGGAGTGACTTCCTTCCTGAGAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS CAA 90 bp | TTCTTTTTGTACTTCTCAGGAAGGAAGTCACTCCAGTTAACAAACTaGAACAGGTGTCTTGACTCTGTTGGCATATGCTCATTTCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: FFLYFSGRKSLQLTN*NRCLDSVGICSFLS Trigger: ACTGAGAAATGAGCATATGCCAACAGAGTCAAGACACCTGTTCAAGTTTGTTAACTGGAGTGACTTCCTTCCTGAGAAGTACAAAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS TCA 72 bp | TGTATGTTAATGGCAAACTCTGTAACTGGGTGTCATTaGATAGCAAAGGGGACAATCTGCTATCCACAAGTA | + |
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Preference number: 6 (lower is better) Translates to: CMLMANSVTGCH*IAKGTICYPQV Trigger: TACTTGTGGATAGCAGATTGTCCCCTTTGCTATTCAATGACACCCAGTTACAGAGTTTGCCATTAACATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS CCA 72 bp | CAAGTGACAATGTATGTTAATGGCAAACTCTGTAACTaGGTGTCATTGAATAGCAAAGGGGACAATCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: QVTMYVNGKLCN*VSLNSKGDNLL Trigger: TAGCAGATTGTCCCCTTTGCTATTCAATGACACCCAGTTACAGAGTTTGCCATTAACATACATTGTCACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS CAA 72 bp | ATGTATGTTAATGGCAAACTCTGTAACTGGGTGTCATaGAATAGCAAAGGGGACAATCTGCTATCCACAAGT | + |
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Preference number: 6 (lower is better) Translates to: MYVNGKLCNWVS*NSKGDNLLSTS Trigger: ACTTGTGGATAGCAGATTGTCCCCTTTGCTATTCAATGACACCCAGTTACAGAGTTTGCCATTAACATACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS CAA 90 bp | TGCTATCCACAAGTACTGGATAGGAAGCATTCAATTTTCCAAGAATaGGTTCAGTGTAAACGTAGTTCTTTTTGTACTTCTCAGGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: CYPQVLDRKHSIFQE*VQCKRSSFCTSQEG Trigger: TCCTTCCTGAGAAGTACAAAAAGAACTACGTTTACACTGAACCAATTCTTGGAAAATTGAATGCTTCCTATCCAGTACTTGTGGATAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS CCA 72 bp | AAGTACTGGATAGGAAGCATTCAATTTTCCAAGAATTaGTTCAGTGTAAACGTAGTTCTTTTTGTACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: KYWIGSIQFSKN*FSVNVVLFVLL Trigger: GAGAAGTACAAAAAGAACTACGTTTACACTGAACCAATTCTTGGAAAATTGAATGCTTCCTATCCAGTACTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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| CDS CAA 72 bp | CAAGTACTGGATAGGAAGCATTCAATTTTCCAAGAATaGGTTCAGTGTAAACGTAGTTCTTTTTGTACTTCT | + |
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Preference number: 6 (lower is better) Translates to: QVLDRKHSIFQE*VQCKRSSFCTS Trigger: AGAAGTACAAAAAGAACTACGTTTACACTGAACCAATTCTTGGAAAATTGAATGCTTCCTATCCAGTACTTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049476.3 |
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