Pregenerated sensors for AAAS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036678Ensembl transcript IDs: ENSMUST00000041208.9, ENSMUST00000229900.2, ENSMUST00000230239.2, ENSMUST00000230406.2, ENSMUST00000230481.2, ENSMUST00000231061.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCACAGCCAAGACAGAGGCACTGAGGGGCTTCCAGGCCAAGGCTaGTACATTTCGCTGCAGACGGTGCTTCAGGGAGGGAACTATAGT | + |
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Preference number: 1 (lower is better) Translates to: GHSQDRGTEGLPGQG*YISLQTVLQGGNYS Trigger: ACTATAGTTCCCTCCCTGAAGCACCGTCTGCAGCGAAATGTAGCAGCCTTGGCCTGGAAGCCCCTCAGTGCCTCTGTCTTGGCTGTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
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| 3UTR CCA 90 bp | TGGCAGCGCCCTGAAAGAGTTGGCCACGCCTCACAAGTCCACATCTaGGCCTCCCAGACTCTAAAGACGGCAGAAGGAGTAGTAGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: WQRPERVGHASQVHI*ASQTLKTAEGVVAR Trigger: CCTGGCTACTACTCCTTCTGCCGTCTTTAGAGTCTGGGAGGCCCAGATGTGGACTTGTGAGGCGTGGCCAACTCTTTCAGGGCGCTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
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| 3UTR CCA 90 bp | AACCTGTGGGTTTCCTTTCATGAGCACAGCCAGACGTTCACCACTTaGGTCCCACACCATGGAGTGGGCCTCTCCCCCGAGTCTCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: NLWVSFHEHSQTFTT*VPHHGVGLSPESLL Trigger: GAGGAGAGACTCGGGGGAGAGGCCCACTCCATGGTGTGGGACCCAAGTGGTGAACGTCTGGCTGTGCTCATGAAAGGAAACCCACAGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR CCA 90 bp | GTAGATAAGGAAGTGGGGTCTAGGGTCCAGATGAGAATACAGCTCTaGCAGGCCACAGCCAAGACAGAGGCACTGAGGGGCTTCCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: VDKEVGSRVQMRIQL*QATAKTEALRGFQA Trigger: GGCCTGGAAGCCCCTCAGTGCCTCTGTCTTGGCTGTGGCCTGCCAGAGCTGTATTCTCATCTGGACCCTAGACCCCACTTCCTTATCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
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| 3UTR TCA 90 bp | ACACGGATGGAGTCGTCCAGCAGGGCCACTGCAAACTTGTTGGTGTaGGGATGCCAGGCAAAGACCCGTAAGCAGCAGCTGGACCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: TRMESSSRATANLLV*GCQAKTRKQQLDQL Trigger: TAACTGGTCCAGCTGCTGCTTACGGGTCTTTGCCTGGCATCCTCACACCAACAAGTTTGCAGTGGCCCTGCTGGACGACTCCATCCGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
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| 3UTR TCA 90 bp | CAAGGAGCAGAGGTTGGTGATGTCTCAGTAAATAGTGGCACTTCATaGATAGAGCCTCCCCCTCCAGCTGGAGGCTCCTGGGCTCGACCA | + |
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Preference number: 1 (lower is better) Translates to: QGAEVGDVSVNSGTS*IEPPPPAGGSWARP Trigger: TGGTCGAGCCCAGGAGCCTCCAGCTGGAGGGGGAGGCTCTATTCATGAAGTGCCACTATTTACTGAGACATCACCAACCTCTGCTCCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR GCA 90 bp | ACAGAGGCACTGAGGGGCTTCCAGGCCAAGGCTGCTACATTTCGCTaGAGACGGTGCTTCAGGGAGGGAACTATAGTGCTGTTGGCATTA | + |
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Preference number: 1 (lower is better) Translates to: TEALRGFQAKAATFR*RRCFREGTIVLLAL Trigger: TAATGCCAACAGCACTATAGTTCCCTCCCTGAAGCACCGTCTGCAGCGAAATGTAGCAGCCTTGGCCTGGAAGCCCCTCAGTGCCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
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| 3UTR CCA 90 bp | TCTAAAGACGGCAGAAGGAGTAGTAGCCAGGACTTTGCTGCCATCTaGGGACCACAGCAGATTGGTAACCCCTCCTCCTCGGAACCAAGG | + |
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Preference number: 1 (lower is better) Translates to: SKDGRRSSSQDFAAI*GPQQIGNPSSSEPR Trigger: CCTTGGTTCCGAGGAGGAGGGGTTACCAATCTGCTGTGGTCCCCAGATGGCAGCAAAGTCCTGGCTACTACTCCTTCTGCCGTCTTTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
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| 3UTR CCA 90 bp | TATAAACACGGATGGAGTCGTCCAGCAGGGCCACTGCAAACTTGTTaGTGTGAGGATGCCAGGCAAAGACCCGTAAGCAGCAGCTGGACC | + |
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Preference number: 1 (lower is better) Translates to: YKHGWSRPAGPLQTC*CEDARQRPVSSSWT Trigger: GGTCCAGCTGCTGCTTACGGGTCTTTGCCTGGCATCCTCACACCAACAAGTTTGCAGTGGCCCTGCTGGACGACTCCATCCGTGTTTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
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| 3UTR TCA 90 bp | GGAGGCTCCTGGGCTCGACCAAGTACTGGGCTAAAGCGTGGAAACTaGGCATTGACAAAGTACAGAGGTATGTGGGTGATTCGGCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: GGSWARPSTGLKRGN*ALTKYRGMWVIRPV Trigger: CACAGGCCGAATCACCCACATACCTCTGTACTTTGTCAATGCTCAGTTTCCACGCTTTAGCCCAGTACTTGGTCGAGCCCAGGAGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR CCA 90 bp | TCCAGCTGGAGGCTCCTGGGCTCGACCAAGTACTGGGCTAAAGCGTaGAAACTGAGCATTGACAAAGTACAGAGGTATGTGGGTGATTCG | + |
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Preference number: 1 (lower is better) Translates to: SSWRLLGSTKYWAKA*KLSIDKVQRYVGDS Trigger: CGAATCACCCACATACCTCTGTACTTTGTCAATGCTCAGTTTCCACGCTTTAGCCCAGTACTTGGTCGAGCCCAGGAGCCTCCAGCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR CCA 90 bp | TTTGTTGAAGGAAGGATGGAAAGTGATGAGCTGAGCTTGGGCTCCTaGTTCCCCCTGAATAATACCACAGGGAAGCAGTTCAAACACGGG | + |
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Preference number: 1 (lower is better) Translates to: FVEGRMESDELSLGS*FPLNNTTGKQFKHG Trigger: CCCGTGTTTGAACTGCTTCCCTGTGGTATTATTCAGGGGGAACCAGGAGCCCAAGCTCAGCTCATCACTTTCCATCCTTCCTTCAACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR CAA 90 bp | GCCTCCCAGACTCTAAAGACGGCAGAAGGAGTAGTAGCCAGGACTTaGCTGCCATCTGGGGACCACAGCAGATTGGTAACCCCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: ASQTLKTAEGVVART*LPSGDHSRLVTPPP Trigger: AGGAGGAGGGGTTACCAATCTGCTGTGGTCCCCAGATGGCAGCAAAGTCCTGGCTACTACTCCTTCTGCCGTCTTTAGAGTCTGGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGATGGAAAGTGATGAGCTGAGCTTGGGCTCCTGGTTCCCCCTGAATAATTTGGGTCCCACACCATaGAGTGGGCCTCTCCCCCGA | + |
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Preference number: 2 (lower is better) Translates to: GRMESDELSLGSWFPLNNLGPTP*SGPLPR Trigger: TCGGGGGAGAGGCCCACTCCATGGTGTGGGACCCAA...ATTATTCAGGGGGAACCAGGAGCCCAAGCTCAGCTCATCACTTTCCATCCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGAGGGTCCCAAGGAGCAGAGGTTGGTGATGTCTCAGTAAATAGTGGCACTACAGAGGTATGTGGGTaGTTCGGCCTGTGGACCAGC | + |
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Preference number: 2 (lower is better) Translates to: GRGSQGAEVGDVSVNSGTTEVCG*FGLWTS Trigger: GCTGGTCCACAGGCCGAATCACCCACATACCTCTGT...AGTGCCACTATTTACTGAGACATCACCAACCTCTGCTCCTTGGGACCCTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR CAA 90 bp | CAAGGCCCCTTTGTTGAAGGAAGGATGGAAAGTGATGAGCTGAGCTaGGGCTCCTGGTTCCCCCTGAATAATACCACAGGGAAGCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: QGPFVEGRMESDELS*GSWFPLNNTTGKQF Trigger: GAACTGCTTCCCTGTGGTATTATTCAGGGGGAACCAGGAGCCCAAGCTCAGCTCATCACTTTCCATCCTTCCTTCAACAAAGGGGCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAGGGTCCCAAGGAGCAGAGGTTGGTGATGTCTCAGTAAATAGTGGCACTGGCTCGACCAAGTACTaGGCTAAAGCGTGGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: GRGSQGAEVGDVSVNSGTGSTKY*AKAWKL Trigger: CAGTTTCCACGCTTTAGCCCAGTACTTGGTCGAGCC...AGTGCCACTATTTACTGAGACATCACCAACCTCTGCTCCTTGGGACCCTCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGATGACAGGATTCCCGTCCTGAACCTGTGGGTTTCCTTTCATGAGCACAGCTCTCTCCTCTCCATCTaGGGTCTGAATTGTTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: EDDRIPVLNLWVSFHEHSSLLSI*GLNCCL Trigger: GAGACAACAATTCAGACCCCAGATGGAGAGGAGAGA...GCTGTGCTCATGAAAGGAAACCCACAGGTTCAGGACGGGAATCCTGTCATCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTACAGAGGTATGTGGGTGATTCGGCCTGTGGACCAGCACACACTAAGCAACCCGTCCTGAACCTGTaGGTTTCCTTTCATGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: KVQRYVGDSACGPAHTKQPVLNL*VSFHEH Trigger: GTGCTCATGAAAGGAAACCCACAGGTTCAGGACGGG...TTGCTTAGTGTGTGCTGGTCCACAGGCCGAATCACCCACATACCTCTGTACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTACAGAGGTATGTGGGTGATTCGGCCTGTGGACCAGCACACACTAAGCAACTGAGCTTGGGCTCCTaGTTCCCCCTGAATAATACC | + |
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Preference number: 2 (lower is better) Translates to: KVQRYVGDSACGPAHTKQLSLGS*FPLNNT Trigger: GGTATTATTCAGGGGGAACCAGGAGCCCAAGCTCAG...TTGCTTAGTGTGTGCTGGTCCACAGGCCGAATCACCCACATACCTCTGTACTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGGAAGGGGGACACAAGTCTCTGTTGAAACGTCCCATACCAGAATAACAGCACTTCCCCCAATACAGTaGACAGCAGTCGGTTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: QGRGTQVSVETSHTRITALPPIQ*TAVGFH Trigger: ATGGAAACCGACTGCTGTTCACTGTATTGGGGGAAG...TGCTGTTATTCTGGTATGGGACGTTTCAACAGAGACTTGTGTCCCCCTTCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000230481.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGGACCAGCACACACTAAGCAAGGCCCCTTTGTTGAAGGAAGGATGGAAATCTCCATCTGGGGTCTaGATTGTTGTCTCAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: PVDQHTLSKAPLLKEGWKSPSGV*IVVSER Trigger: TCTTTCTGAGACAACAATTCAGACCCCAGATGGAGA...TTTCCATCCTTCCTTCAACAAAGGGGCCTTGCTTAGTGTGTGCTGGTCCACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTCGCTGCAGACGGTGCTTCAGGGAGGGAACTATAGTGCTGTTGGCATTATACCACTGCAAACTTGTTaGTGTGAGGATGCCAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: ISLQTVLQGGNYSAVGIIPLQTC*CEDARQ Trigger: TTGCCTGGCATCCTCACACCAACAAGTTTGCAGTGG...TATAATGCCAACAGCACTATAGTTCCCTCCCTGAAGCACCGTCTGCAGCGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTATTTACAAGTGGGAATGAGGGGAGTGGGGTTGAGCAGATGATTGTCCTGAAGTACAGAGGTATGTaGGTGATTCGGCCTGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: TLFTSGNEGSGVEQMIVLKYRGM*VIRPVD Trigger: GTCCACAGGCCGAATCACCCACATACCTCTGTACTT...CAGGACAATCATCTGCTCAACCCCACTCCCCTCATTCCCACTTGTAAATAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCTTCAGGGAGGGAACTATAGTGCTGTTGGCATTATAAACACGGATGGAGTCGACCAGTTAGTTACTTaGGCAAATTCAGCAATCAGA | + |
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Preference number: 2 (lower is better) Translates to: VLQGGNYSAVGIINTDGVDQLVT*ANSAIR Trigger: TCTGATTGCTGAATTTGCCCAAGTAACTAACTGGTC...GACTCCATCCGTGTTTATAATGCCAACAGCACTATAGTTCCCTCCCTGAAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
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| 3UTR CCA 72 bp | GCACAGCCAGACGTTCACCACTTGGGTCCCACACCATaGAGTGGGCCTCTCCCCCGAGTCTCTCCTCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: AQPDVHHLGPTP*SGPLPRVSPLH Trigger: ATGGAGAGGAGAGACTCGGGGGAGAGGCCCACTCCATGGTGTGGGACCCAAGTGGTGAACGTCTGGCTGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR-3UTR CAA 90 bp | GGCCTCCCAGACTCTAAAGACGGCAGAAGGAGTAGTAGCCAGGACTTTGCTGCCAGCGCCCTGAAAGAGTaGGCCACGCCTCACAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: GLPDSKDGRRSSSQDFAASALKE*ATPHKS Trigger: GGACTTGTGAGGCGTGGCCAACTCTTTCAGGGCGCT...GGCAGCAAAGTCCTGGCTACTACTCCTTCTGCCGTCTTTAGAGTCTGGGAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
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| 3UTR TCA 72 bp | GAGTCGTCCAGCAGGGCCACTGCAAACTTGTTGGTGTaGGGATGCCAGGCAAAGACCCGTAAGCAGCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: ESSSRATANLLV*GCQAKTRKQQL Trigger: CAGCTGCTGCTTACGGGTCTTTGCCTGGCATCCTCACACCAACAAGTTTGCAGTGGCCCTGCTGGACGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
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| 3UTR GCA 72 bp | CTGAGGGGCTTCCAGGCCAAGGCTGCTACATTTCGCTaGAGACGGTGCTTCAGGGAGGGAACTATAGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LRGFQAKAATFR*RRCFREGTIVL Trigger: CAGCACTATAGTTCCCTCCCTGAAGCACCGTCTGCAGCGAAATGTAGCAGCCTTGGCCTGGAAGCCCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
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| 3UTR CCA 72 bp | GGCAGAAGGAGTAGTAGCCAGGACTTTGCTGCCATCTaGGGACCACAGCAGATTGGTAACCCCTCCTCCTCG | + |
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Preference number: 3 (lower is better) Translates to: GRRSSSQDFAAI*GPQQIGNPSSS Trigger: CGAGGAGGAGGGGTTACCAATCTGCTGTGGTCCCCAGATGGCAGCAAAGTCCTGGCTACTACTCCTTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
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| 3UTR CCA 72 bp | GGATGGAGTCGTCCAGCAGGGCCACTGCAAACTTGTTaGTGTGAGGATGCCAGGCAAAGACCCGTAAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: GWSRPAGPLQTC*CEDARQRPVSS Trigger: GCTGCTTACGGGTCTTTGCCTGGCATCCTCACACCAACAAGTTTGCAGTGGCCCTGCTGGACGACTCCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
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| 3UTR-3UTR CAA 90 bp | GCTTCCCCCAATACAGTGAACAGCAGTCGGTTTCCATCTGGACTCCAGCAGCCAGTAGTAGCCAGGACTTaGCTGCCATCTGGGGACCAC | + |
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Preference number: 3 (lower is better) Translates to: ASPNTVNSSRFPSGLQQPVVART*LPSGDH Trigger: GTGGTCCCCAGATGGCAGCAAAGTCCTGGCTACTAC...TGGCTGCTGGAGTCCAGATGGAAACCGACTGCTGTTCACTGTATTGGGGGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230481.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCTCCTCGGAACCAAGGAAGGGGGACACAAGTCTCTGTTGAAACGTCCCATAAGCGCCCTGAAAGAGTaGGCCACGCCTCACAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: LLLGTKEGGHKSLLKRPISALKE*ATPHKS Trigger: GGACTTGTGAGGCGTGGCCAACTCTTTCAGGGCGCT...TATGGGACGTTTCAACAGAGACTTGTGTCCCCCTTCCTTGGTTCCGAGGAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
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| 3UTR TCA 72 bp | CAGGATTCCCGTCCTGAACCTGTGGGTTTCCTTTCATaGGCACAGCCAGACGTTCACCACTTGGGTCCCACA | + |
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Preference number: 3 (lower is better) Translates to: QDSRPEPVGFLS*AQPDVHHLGPT Trigger: TGTGGGACCCAAGTGGTGAACGTCTGGCTGTGCTCATGAAAGGAAACCCACAGGTTCAGGACGGGAATCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR CCA 72 bp | CCCTCCAGCTGGAGGCTCCTGGGCTCGACCAAGTACTaGGCTAAAGCGTGGAAACTGAGCATTGACAAAGTA | + |
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Preference number: 3 (lower is better) Translates to: PSSWRLLGSTKY*AKAWKLSIDKV Trigger: TACTTTGTCAATGCTCAGTTTCCACGCTTTAGCCCAGTACTTGGTCGAGCCCAGGAGCCTCCAGCTGGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR TCA 72 bp | GAGGTTGGTGATGTCTCAGTAAATAGTGGCACTTCATaGATAGAGCCTCCCCCTCCAGCTGGAGGCTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: EVGDVSVNSGTS*IEPPPPAGGSW Trigger: CCAGGAGCCTCCAGCTGGAGGGGGAGGCTCTATTCATGAAGTGCCACTATTTACTGAGACATCACCAACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR-3UTR CAA 90 bp | GGCCACGCCTCACAAGTCCACATCTGGGCCTCCCAGACTCTAAAGACGGCAGAAGGACCAGTTAGTTACTaGGGCAAATTCAGCAATCAG | + |
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Preference number: 3 (lower is better) Translates to: GHASQVHIWASQTLKTAEGPVSY*GKFSNQ Trigger: CTGATTGCTGAATTTGCCCAAGTAACTAACTGGTCC...TTCTGCCGTCTTTAGAGTCTGGGAGGCCCAGATGTGGACTTGTGAGGCGTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
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| 3UTR GCA 72 bp | TTCCAGGCCAAGGCTGCTACATTTCGCTGCAGACGGTaGTTCAGGGAGGGAACTATAGTGCTGTTGGCATTA | + |
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Preference number: 3 (lower is better) Translates to: FQAKAATFRCRR*FREGTIVLLAL Trigger: TAATGCCAACAGCACTATAGTTCCCTCCCTGAAGCACCGTCTGCAGCGAAATGTAGCAGCCTTGGCCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
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| 3UTR CCA 72 bp | GGAAGGATGGAAAGTGATGAGCTGAGCTTGGGCTCCTaGTTCCCCCTGAATAATACCACAGGGAAGCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: GRMESDELSLGS*FPLNNTTGKQF Trigger: GAACTGCTTCCCTGTGGTATTATTCAGGGGGAACCAGGAGCCCAAGCTCAGCTCATCACTTTCCATCCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR GCA 72 bp | ATTATAAACACGGATGGAGTCGTCCAGCAGGGCCACTaGAAACTTGTTGGTGTGAGGATGCCAGGCAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: IINTDGVVQQGH*KLVGVRMPGKD Trigger: GTCTTTGCCTGGCATCCTCACACCAACAAGTTTGCAGTGGCCCTGCTGGACGACTCCATCCGTGTTTATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
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| 3UTR CCA 72 bp | AGGCTCCTGGGCTCGACCAAGTACTGGGCTAAAGCGTaGAAACTGAGCATTGACAAAGTACAGAGGTATGTG | + |
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Preference number: 3 (lower is better) Translates to: RLLGSTKYWAKA*KLSIDKVQRYV Trigger: CACATACCTCTGTACTTTGTCAATGCTCAGTTTCCACGCTTTAGCCCAGTACTTGGTCGAGCCCAGGAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR TCA 72 bp | TCCTCGGAACCAAGGAAGGGGGACACAAGTCTCTGTTaGAACGTCCCATACCAGAATAACAGCATCTACAGG | + |
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Preference number: 3 (lower is better) Translates to: SSEPRKGDTSLC*NVPYQNNSIYR Trigger: CCTGTAGATGCTGTTATTCTGGTATGGGACGTTTCAACAGAGACTTGTGTCCCCCTTCCTTGGTTCCGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
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| 3UTR-3UTR CAA 90 bp | GGAAGAGGGTCCCAAGGAGCAGAGGTTGGTGATGTCTCAGTAAATAGTGGCACTCATCTGGGGTCTGAATaGTTGTCTCAGAAAGATCTG | + |
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Preference number: 3 (lower is better) Translates to: GRGSQGAEVGDVSVNSGTHLGSE*LSQKDL Trigger: CAGATCTTTCTGAGACAACAATTCAGACCCCAGATG...AGTGCCACTATTTACTGAGACATCACCAACCTCTGCTCCTTGGGACCCTCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR TCA 72 bp | TGGGCTCGACCAAGTACTGGGCTAAAGCGTGGAAACTaGGCATTGACAAAGTACAGAGGTATGTGGGTGATT | + |
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Preference number: 3 (lower is better) Translates to: WARPSTGLKRGN*ALTKYRGMWVI Trigger: AATCACCCACATACCTCTGTACTTTGTCAATGCTCAGTTTCCACGCTTTAGCCCAGTACTTGGTCGAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
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| 3UTR TCA 72 bp | ATGACAAGGAATAAATTAATGCTTCCCCCAATACAGTaGACAGCAGTCGGTTTCCATCTGGACTCCAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: MTRNKLMLPPIQ*TAVGFHLDSSS Trigger: GCTGCTGGAGTCCAGATGGAAACCGACTGCTGTTCACTGTATTGGGGGAAGCATTAATTTATTCCTTGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230481.2 |
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| 3UTR CAA 72 bp | GACTCCAGCAGCCAGTCTGGCAGCGCCCTGAAAGAGTaGGCCACGCCTCACAAGTCCACATCTGGGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: DSSSQSGSALKE*ATPHKSTSGPP Trigger: GGGAGGCCCAGATGTGGACTTGTGAGGCGTGGCCAACTCTTTCAGGGCGCTGCCAGACTGGCTGCTGGAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230481.2 |
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| CDS-3UTR GCA 90 bp | CAGCAGATTGGTAACCCCTCCTCCTCGGAACCAAGGAAGGGGGACACAAGTCTCGAGCCAGGGCCCAGCTaGAGGCTGTCTTTACCCACT | + |
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Preference number: 4 (lower is better) Translates to: QQIGNPSSSEPRKGDTSLEPGPS*RLSLPT Trigger: AGTGGGTAAAGACAGCCTGCAGCTGGGCCCTGGCTC...GAGACTTGTGTCCCCCTTCCTTGGTTCCGAGGAGGAGGGGTTACCAATCTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230481.2 |
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| CDS-3UTR CCA 90 bp | TACAGTGAACAGCAGTCGGTTTCCATCTGGACTCCAGCAGCCAGTCTGGCAGCGGCAGTTCTTGTACCATaGTCCAGCCTCCCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YSEQQSVSIWTPAASLAAAVLVP*SSLPGA Trigger: AGCCCCAGGGAGGCTGGACCATGGTACAAGAACTGC...CGCTGCCAGACTGGCTGCTGGAGTCCAGATGGAAACCGACTGCTGTTCACTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230481.2 |
||
| CDS-3UTR CCA 90 bp | CGCCTCACAAGTCCACATCTGGGCCTCCCAGACTCTAAAGACGGCAGAAGGAGTCCTGAGAGAGAGGTGTaGAAACAGGGAGCCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLTSPHLGLPDSKDGRRSPEREV*KQGAME Trigger: CTCCATGGCTCCCTGTTTCCACACCTCTCTCTCAGG...ACTCCTTCTGCCGTCTTTAGAGTCTGGGAGGCCCAGATGTGGACTTGTGAGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230481.2 |
||
| CDS-3UTR TCA 90 bp | CCACGCCTCACAAGTCCACATCTGGGCCTCCCAGACTCTAAAGACGGCAGAAGGGCTCACGGTGATGGATaGAGGCAGTTCTTGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PRLTSPHLGLPDSKDGRRAHGDG*RQFLYH Trigger: ATGGTACAAGAACTGCCTTCATCCATCACCGTGAGC...CCTTCTGCCGTCTTTAGAGTCTGGGAGGCCCAGATGTGGACTTGTGAGGCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
||
| CDS-3UTR CCA 90 bp | GGATGGAGTCGTCCAGCAGGGCCACTGCAAACTTGTTGGTGTGAGGATGCCAGGCTTTTAGGGGATCCTTaGTCAGGTGTAGGACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GWSRPAGPLQTCWCEDARLLGDP*SGVGQE Trigger: TTCCTGTCCTACACCTGACCAAGGATCCCCTAAAAG...CCTGGCATCCTCACACCAACAAGTTTGCAGTGGCCCTGCTGGACGACTCCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGCCTCCCAGACTCTAAAGACGGCAGAAGGAGTAGTAGCCAGGACTTTGCTCACACTTGCTCACGGTaGTGGATGAAGGCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGLPDSKDGRRSSSQDFAHTCSR*WMKAVL Trigger: AAGAACTGCCTTCATCCATCACCGTGAGCAAGTGTG...AGCAAAGTCCTGGCTACTACTCCTTCTGCCGTCTTTAGAGTCTGGGAGGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
||
| CDS-3UTR CCA 90 bp | TACAGTGAACAGCAGTCGGTTTCCATCTGGACTCCAGCAGCCAGTCTGGCAGCGCTTTTAGGGGATCCTTaGTCAGGTGTAGGACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YSEQQSVSIWTPAASLAALLGDP*SGVGQE Trigger: TTCCTGTCCTACACCTGACCAAGGATCCCCTAAAAG...CGCTGCCAGACTGGCTGCTGGAGTCCAGATGGAAACCGACTGCTGTTCACTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230481.2 |
||
| CDS-3UTR TCA 90 bp | GGCTGCTACATTTCGCTGCAGACGGTGCTTCAGGGAGGGAACTATAGTGCTGTTCACACTTGCTCACGGTaGTGGATGAAGGCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GCYISLQTVLQGGNYSAVHTCSR*WMKAVL Trigger: AAGAACTGCCTTCATCCATCACCGTGAGCAAGTGTG...AACAGCACTATAGTTCCCTCCCTGAAGCACCGTCTGCAGCGAAATGTAGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
||
| CDS-3UTR TCA 90 bp | CACATCTGGGCCTCCCAGACTCTAAAGACGGCAGAAGGAGTAGTAGCCAGGACTTCAGATCTTCACTCCTaGGAGAGAGGTGTGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HIWASQTLKTAEGVVARTSDLHS*ERGVET Trigger: TGTTTCCACACCTCTCTCTCAGGAGTGAAGATCTGA...AGTCCTGGCTACTACTCCTTCTGCCGTCTTTAGAGTCTGGGAGGCCCAGATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230481.2 |
||
| CDS-3UTR GCA 90 bp | GGACCACAGCAGATTGGTAACCCCTCCTCCTCGGAACCAAGGAAGGGGGACACAAAAAGGCCCACATCATaGCAAACATTGATGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPQQIGNPSSSEPRKGDTKRPTS*QTLMHL Trigger: GAGATGCATCAATGTTTGGCATGATGTGGGCCTTTT...TGTGTCCCCCTTCCTTGGTTCCGAGGAGGAGGGGTTACCAATCTGCTGTGGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTTCAGGGAGGGAACTATAGTGCTGTTGGCATTATAAACACGGATGGAGTCGCAGTTCTTGTACCATaGTCCAGCCTCCCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLQGGNYSAVGIINTDGVAVLVP*SSLPGA Trigger: AGCCCCAGGGAGGCTGGACCATGGTACAAGAACTGC...GACTCCATCCGTGTTTATAATGCCAACAGCACTATAGTTCCCTCCCTGAAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTCGGAACCAAGGAAGGGGGACACAAGTCTCTGTTGAAACGTCCCATACCACCACTGCAAACTTGTTaGTGTGAGGATGCCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLGTKEGGHKSLLKRPIPPLQTC*CEDARQ Trigger: TTGCCTGGCATCCTCACACCAACAAGTTTGCAGTGG...TGGTATGGGACGTTTCAACAGAGACTTGTGTCCCCCTTCCTTGGTTCCGAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230481.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTACAGAGGTATGTGGGTGATTCGGCCTGTGGACCAGCACACACTAAGCAATCCTTTCCCTGTTCCTaGCAGCGCCCTGAAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KVQRYVGDSACGPAHTKQSFPCS*QRPERV Trigger: AACTCTTTCAGGGCGCTGCCAGGAACAGGGAAAGGA...TTGCTTAGTGTGTGCTGGTCCACAGGCCGAATCACCCACATACCTCTGTACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
||
| CDS-3UTR TCA 90 bp | AACCAAGGAAGGGGGACACAAGTCTCTGTTGAAACGTCCCATACCAGAATAACAGGTCTAGGGTCCAGATaGGAATACAGCTGGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NQGRGTQVSVETSHTRITGLGSR*EYSWCF Trigger: GAAGCACCAGCTGTATTCTCATCTGGACCCTAGACC...TGTTATTCTGGTATGGGACGTTTCAACAGAGACTTGTGTCCCCCTTCCTTGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230481.2 |
||
| CDS-3UTR TCA 90 bp | GGGACACAAGTCTCTGTTGAAACGTCCCATACCAGAATAACAGCATCTACAGGTGCTCACGGTGATGGATaGAGGCAGTTCTTGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTQVSVETSHTRITASTGAHGDG*RQFLYH Trigger: ATGGTACAAGAACTGCCTTCATCCATCACCGTGAGC...ACCTGTAGATGCTGTTATTCTGGTATGGGACGTTTCAACAGAGACTTGTGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
||
| CDS-3UTR TCA 90 bp | TATAAACACGGATGGAGTCGTCCAGCAGGGCCACTGCAAACTTGTTGGTGTGAGCTGAGCTTCTTCCTCTaGATTCGCAATTTCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YKHGWSRPAGPLQTCWCELSFFL*IRNFIQ Trigger: CTGAATGAAATTGCGAATTCAGAGGAAGAAGCTCAG...CTCACACCAACAAGTTTGCAGTGGCCCTGCTGGACGACTCCATCCGTGTTTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
||
| CDS-3UTR TCA 90 bp | GTGCTTCAGGGAGGGAACTATAGTGCTGTTGGCATTATAAACACGGATGGAGTCCATCATGCCAAACATTaGTGCATCTCTTCCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: VLQGGNYSAVGIINTDGVHHAKH*CISSTL Trigger: AAGTGTGGAAGAGATGCATCAATGTTTGGCATGATG...GACTCCATCCGTGTTTATAATGCCAACAGCACTATAGTTCCCTCCCTGAAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229900.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGGGACACAAGTCTCTGTTGAAACGTCCCATACCAGAATAACAGCATCTAAAAGGCCCACATCATaGCAAACATTGATGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRGTQVSVETSHTRITASKRPTS*QTLMHL Trigger: GAGATGCATCAATGTTTGGCATGATGTGGGCCTTTT...AGATGCTGTTATTCTGGTATGGGACGTTTCAACAGAGACTTGTGTCCCCCTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
||
| CDS-3UTR CCA 90 bp | GGGACACAAGTCTCTGTTGAAACGTCCCATACCAGAATAACAGCATCTACAGGTGACCAGTTAGTTACTTaGGCAAATTCAGCAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTQVSVETSHTRITASTGDQLVT*ANSAIR Trigger: TCTGATTGCTGAATTTGCCCAAGTAACTAACTGGTC...ACCTGTAGATGCTGTTATTCTGGTATGGGACGTTTCAACAGAGACTTGTGTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230481.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAGACGTTCACCACTTGGGTCCCACACCATGGAGTGGGCCTCTCCCCCGAGAGCGCCCTGAAAGAGTaGGCCACGCCTCACAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQTFTTWVPHHGVGLSPESALKE*ATPHKS Trigger: GGACTTGTGAGGCGTGGCCAACTCTTTCAGGGCGCT...CTCGGGGGAGAGGCCCACTCCATGGTGTGGGACCCAAGTGGTGAACGTCTGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
||
| CDS CCA 90 bp | ATCAGATCTTCACTCCTGAGAGAGAGGTGTGGAAACAGGGAGCCATaGAGTGAGGAGGCGCGGCCACAGAGAGCCAGGGCCCAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IRSSLLRERCGNREP*SEEARPQRARAQLQ Trigger: CTGCAGCTGGGCCCTGGCTCTCTGTGGCCGCGCCTCCTCACTCCATGGCTCCCTGTTTCCACACCTCTCTCTCAGGAGTGAAGATCTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041208.9 ENSMUST00000230481.2 ENSMUST00000231061.2 |
||
| CDS GCA 90 bp | AGCCATGGAGTGAGGAGGCGCGGCCACAGAGAGCCAGGGCCCAGCTaGAGGCTGTCTTTACCCACTCAAACACTTCTTCCTCTGAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: SHGVRRRGHREPGPS*RLSLPTQTLLPLNS Trigger: CGAATTCAGAGGAAGAAGTGTTTGAGTGGGTAAAGACAGCCTGCAGCTGGGCCCTGGCTCTCTGTGGCCGCGCCTCCTCACTCCATGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041208.9 ENSMUST00000230481.2 ENSMUST00000231061.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAGACGTTCACCACTTGGGTCCCACACCATGGAGTGGGCCTCTCCCCCGAGCGATGGTTGCTGACTTaGCACCTCCAACATGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SQTFTTWVPHHGVGLSPERWLLT*HLQHVL Trigger: AAGGACATGTTGGAGGTGCAAAGTCAGCAACCATCG...CTCGGGGGAGAGGCCCACTCCATGGTGTGGGACCCAAGTGGTGAACGTCTGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
||
| CDS-3UTR CAA 90 bp | AGCGCCCTGAAAGAGTTGGCCACGCCTCACAAGTCCACATCTGGGCCTCCCAGAGCTTTTAGGGGATCCTaGGTCAGGTGTAGGACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SALKELATPHKSTSGPPRAFRGS*VRCRTG Trigger: TCCTGTCCTACACCTGACCAAGGATCCCCTAAAAGC...TCTGGGAGGCCCAGATGTGGACTTGTGAGGCGTGGCCAACTCTTTCAGGGCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
||
| CDS-3UTR CAA 90 bp | CGCCCTGAAAGAGTTGGCCACGCCTCACAAGTCCACATCTGGGCCTCCCAGACTGCTTTTAGGGGATCCTaGGTCAGGTGTAGGACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPERVGHASQVHIWASQTAFRGS*VRCRTG Trigger: TCCTGTCCTACACCTGACCAAGGATCCCCTAAAAGC...AGTCTGGGAGGCCCAGATGTGGACTTGTGAGGCGTGGCCAACTCTTTCAGGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
||
| CDS-3UTR CAA 90 bp | GGTGATTCGGCCTGTGGACCAGCACACACTAAGCAAGGCCCCTTTGTTGAAGGAGTAGTAGCCAGGACTTaGCTGCCATCTGGGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GDSACGPAHTKQGPFVEGVVART*LPSGDH Trigger: GTGGTCCCCAGATGGCAGCAAAGTCCTGGCTACTAC...TCCTTCAACAAAGGGGCCTTGCTTAGTGTGTGCTGGTCCACAGGCCGAATCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
||
| CDS GCA 90 bp | ACAGAGGCACTGAGGGGCTTCCAGGCCAAGGCTGCTACATTTCGCTaGAGACGGTGCTTCAGGGAGGGAACTATAGTGCAGTTAGTTACT | + |
|
Preference number: 5 (lower is better) Translates to: TEALRGFQAKAATFR*RRCFREGTIVQLVT Trigger: AGTAACTAACTGCACTATAGTTCCCTCCCTGAAGCACCGTCTGCAGCGAAATGTAGCAGCCTTGGCCTGGAAGCCCCTCAGTGCCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231061.2 |
||
| CDS GCA 90 bp | CTGAGGGGCTTCCAGGCCAAGGCTGCTACATTTCGCTGCAGACGGTaGTTCAGGGAGGGAACTATAGTGCAGTTAGTTACTTGGGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LRGFQAKAATFRCRR*FREGTIVQLVTWAN Trigger: ATTTGCCCAAGTAACTAACTGCACTATAGTTCCCTCCCTGAAGCACCGTCTGCAGCGAAATGTAGCAGCCTTGGCCTGGAAGCCCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231061.2 |
||
| CDS-3UTR CAA 90 bp | CTAAAGACGGCAGAAGGAGTAGTAGCCAGGACTTTGCTGCCATCTGGGGACCACGCATCTCTTCCACACTaGCTCACGGTGATGGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: LKTAEGVVARTLLPSGDHASLPH*LTVMDE Trigger: TTCATCCATCACCGTGAGCAAGTGTGGAAGAGATGC...GTGGTCCCCAGATGGCAGCAAAGTCCTGGCTACTACTCCTTCTGCCGTCTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
||
| CDS TCA 90 bp | ACATCATGCCAAACATTGATGCATCTCTTCCACACTTGCTCACGGTaGTGGATGAAGGCAGTTCTTGTACCATGGTCCAGCCTCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TSCQTLMHLFHTCSR*WMKAVLVPWSSLPG Trigger: CCCAGGGAGGCTGGACCATGGTACAAGAACTGCCTTCATCCATCACCGTGAGCAAGTGTGGAAGAGATGCATCAATGTTTGGCATGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041208.9 ENSMUST00000229900.2 ENSMUST00000230481.2 ENSMUST00000231061.2 |
||
| CDS-3UTR CAA 90 bp | CGCCTCACAAGTCCACATCTGGGCCTCCCAGACTCTAAAGACGGCAGAAGGAGTACATCATGCCAAACATaGATGCATCTCTTCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: RLTSPHLGLPDSKDGRRSTSCQT*MHLFHT Trigger: AGTGTGGAAGAGATGCATCAATGTTTGGCATGATGT...ACTCCTTCTGCCGTCTTTAGAGTCTGGGAGGCCCAGATGTGGACTTGTGAGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTCCTCGGAACCAAGGAAGGGGGACACAAGTCTCTGTTGAAACGTCCCATAGGACCAGTTAGTTACTaGGGCAAATTCAGCAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLLGTKEGGHKSLLKRPIGPVSY*GKFSNQ Trigger: CTGATTGCTGAATTTGCCCAAGTAACTAACTGGTCC...TATGGGACGTTTCAACAGAGACTTGTGTCCCCCTTCCTTGGTTCCGAGGAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230481.2 |
||
| CDS TCA 90 bp | GATGACAGGATTCCCGTCCTGAACCTCTCCTCTCCATCTGGGGTCTaGATTGTTGTCTCAGAAAGATCTGCTACGATGGTTGCTGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: DDRIPVLNLSSPSGV*IVVSERSATMVADF Trigger: AAAGTCAGCAACCATCGTAGCAGATCTTTCTGAGACAACAATTCAGACCCCAGATGGAGAGGAGAGGTTCAGGACGGGAATCCTGTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230239.2 |
||
| CDS CCA 90 bp | CTCCATCTGGGGTCTGAATTGTTGTCTCAGAAAGATCTGCTACGATaGTTGCTGACTTTGCACCTCCAACATGTCCTTTCCCTGTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LHLGSELLSQKDLLR*LLTLHLQHVLSLFH Trigger: GTGGAACAGGGAAAGGACATGTTGGAGGTGCAAAGTCAGCAACCATCGTAGCAGATCTTTCTGAGACAACAATTCAGACCCCAGATGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041208.9 ENSMUST00000230239.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGGGACACAAGTCTCTGTTGAAACGTCCCATACCAGAATAACAGCATCTGCATCTCTTCCACACTaGCTCACGGTGATGGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: GRGTQVSVETSHTRITASASLPH*LTVMDE Trigger: TTCATCCATCACCGTGAGCAAGTGTGGAAGAGATGC...AGATGCTGTTATTCTGGTATGGGACGTTTCAACAGAGACTTGTGTCCCCCTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229900.2 ENSMUST00000230481.2 |
||
| CDS TCA 90 bp | TGGGGTCTGAATTGTTGTCTCAGAAAGATCTGCTACGATGGTTGCTaGCTTTGCACCTCCAACATGTCCTTTCCCTGTTCCACATCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WGLNCCLRKICYDGC*LCTSNMSFPCSTSF Trigger: GAACGATGTGGAACAGGGAAAGGACATGTTGGAGGTGCAAAGTCAGCAACCATCGTAGCAGATCTTTCTGAGACAACAATTCAGACCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041208.9 ENSMUST00000230239.2 |
||
| CDS CCA 72 bp | TCACTCCTGAGAGAGAGGTGTGGAAACAGGGAGCCATaGAGTGAGGAGGCGCGGCCACAGAGAGCCAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLLRERCGNREP*SEEARPQRARA Trigger: GGCCCTGGCTCTCTGTGGCCGCGCCTCCTCACTCCATGGCTCCCTGTTTCCACACCTCTCTCTCAGGAGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041208.9 ENSMUST00000230481.2 ENSMUST00000231061.2 |
||
| CDS GCA 72 bp | GGCCCCGAAAGTCGGGAGGCGGGCTCTCATAGCTGTTaGCGGTCACCAGCTCGTTATTGTGCTCATACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPESREAGSHSC*RSPARYCAHTG Trigger: CCCTGTATGAGCACAATAACGAGCTGGTGACCGGCAACAGCTATGAGAGCCCGCCTCCCGACTTTCGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041208.9 ENSMUST00000231061.2 |
||
| CDS CAA 72 bp | TGTCCTTTCCCTGTTCCTGGCAGCGCCCTGAAAGAGTaGGCCACGCCTCACAAGTCCACATCTGGGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: CPFPVPGSALKE*ATPHKSTSGPP Trigger: GGGAGGCCCAGATGTGGACTTGTGAGGCGTGGCCAACTCTTTCAGGGCGCTGCCAGGAACAGGGAAAGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230406.2 |
||
| CDS TCA 72 bp | TTAGGGGATCCTTGGTCAGGTGTAGGACAGGAAGATTaGTCCACTGGCCCCGAAAGTCGGGAGGCGGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGDPWSGVGQED*STGPESREAGS Trigger: AGAGCCCGCCTCCCGACTTTCGGGGCCAGTGGATCAATCTTCCTGTCCTACACCTGACCAAGGATCCCCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041208.9 ENSMUST00000231061.2 |
||
| CDS CAA 72 bp | TTTAGGGGATCCTTGGTCAGGTGTAGGACAGGAAGATaGATCCACTGGCCCCGAAAGTCGGGAGGCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FRGSLVRCRTGR*IHWPRKSGGGL Trigger: GAGCCCGCCTCCCGACTTTCGGGGCCAGTGGATCAATCTTCCTGTCCTACACCTGACCAAGGATCCCCTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041208.9 ENSMUST00000231061.2 |
||
| CDS TCA 72 bp | CGAGTTCGAAAAAGGAGGATGACAGGATTCCCGTCCTaGACCTCTCCTCTCCATCTGGGGTCTGAATTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RVRKRRMTGFPS*TSPLHLGSELL Trigger: CAACAATTCAGACCCCAGATGGAGAGGAGAGGTTCAGGACGGGAATCCTGTCATCCTCCTTTTTCGAACTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230239.2 |
||
| CDS GCA 72 bp | TTCCAGGCCAAGGCTGCTACATTTCGCTGCAGACGGTaGTTCAGGGAGGGAACTATAGTGCAGTTAGTTACT | + |
|
Preference number: 6 (lower is better) Translates to: FQAKAATFRCRR*FREGTIVQLVT Trigger: AGTAACTAACTGCACTATAGTTCCCTCCCTGAAGCACCGTCTGCAGCGAAATGTAGCAGCCTTGGCCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231061.2 |
||
| CDS TCA 72 bp | CAAACATTGATGCATCTCTTCCACACTTGCTCACGGTaGTGGATGAAGGCAGTTCTTGTACCATGGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QTLMHLFHTCSR*WMKAVLVPWSS Trigger: GCTGGACCATGGTACAAGAACTGCCTTCATCCATCACCGTGAGCAAGTGTGGAAGAGATGCATCAATGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041208.9 ENSMUST00000229900.2 ENSMUST00000230481.2 ENSMUST00000231061.2 |
||
| CDS TCA 72 bp | ATTCCCGTCCTGAACCTCTCCTCTCCATCTGGGGTCTaGATTGTTGTCTCAGAAAGATCTGCTACGATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: IPVLNLSSPSGV*IVVSERSATMV Trigger: AACCATCGTAGCAGATCTTTCTGAGACAACAATTCAGACCCCAGATGGAGAGGAGAGGTTCAGGACGGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230239.2 |
||
| CDS CAA 90 bp | AAAAAGGCCCACATCATGCCAAACATTGATGCATCTCTTCCACACTaGCTCACGGTGATGGATGAAGGCAGTTCTTGTACCATGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KKAHIMPNIDASLPH*LTVMDEGSSCTMVQ Trigger: CTGGACCATGGTACAAGAACTGCCTTCATCCATCACCGTGAGCAAGTGTGGAAGAGATGCATCAATGTTTGGCATGATGTGGGCCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041208.9 ENSMUST00000229900.2 ENSMUST00000230481.2 ENSMUST00000231061.2 |
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| CDS CAA 90 bp | CATCTGGGGTCTGAATTGTTGTCTCAGAAAGATCTGCTACGATGGTaGCTGACTTTGCACCTCCAACATGTCCTTTCCCTGTTCCACATC | + |
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Preference number: 6 (lower is better) Translates to: HLGSELLSQKDLLRW*LTLHLQHVLSLFHI Trigger: GATGTGGAACAGGGAAAGGACATGTTGGAGGTGCAAAGTCAGCAACCATCGTAGCAGATCTTTCTGAGACAACAATTCAGACCCCAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041208.9 ENSMUST00000230239.2 |
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| CDS CAA 90 bp | TCTGAATTGTTGTCTCAGAAAGATCTGCTACGATGGTTGCTGACTTaGCACCTCCAACATGTCCTTTCCCTGTTCCACATCGTTCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SELLSQKDLLRWLLT*HLQHVLSLFHIVLG Trigger: TCCCAGAACGATGTGGAACAGGGAAAGGACATGTTGGAGGTGCAAAGTCAGCAACCATCGTAGCAGATCTTTCTGAGACAACAATTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041208.9 ENSMUST00000230239.2 |
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| CDS CCA 72 bp | AAGACCCGTAAGCAGCAGCTGGACCAGTTAGTTACTTaGGCAAATTCAGCAATCAGATCTTCACTCCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: KTRKQQLDQLVT*ANSAIRSSLLR Trigger: TCTCAGGAGTGAAGATCTGATTGCTGAATTTGCCCAAGTAACTAACTGGTCCAGCTGCTGCTTACGGGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041208.9 ENSMUST00000230481.2 |
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| CDS CAA 72 bp | CACATCATGCCAAACATTGATGCATCTCTTCCACACTaGCTCACGGTGATGGATGAAGGCAGTTCTTGTACC | + |
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Preference number: 6 (lower is better) Translates to: HIMPNIDASLPH*LTVMDEGSSCT Trigger: GGTACAAGAACTGCCTTCATCCATCACCGTGAGCAAGTGTGGAAGAGATGCATCAATGTTTGGCATGATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041208.9 ENSMUST00000229900.2 ENSMUST00000230481.2 ENSMUST00000231061.2 |
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| CDS CAA 72 bp | TTGTCTCAGAAAGATCTGCTACGATGGTTGCTGACTTaGCACCTCCAACATGTCCTTTCCCTGTTCCACATC | + |
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Preference number: 6 (lower is better) Translates to: LSQKDLLRWLLT*HLQHVLSLFHI Trigger: GATGTGGAACAGGGAAAGGACATGTTGGAGGTGCAAAGTCAGCAACCATCGTAGCAGATCTTTCTGAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041208.9 ENSMUST00000230239.2 |
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| CDS TCA 72 bp | AATTGTTGTCTCAGAAAGATCTGCTACGATGGTTGCTaGCTTTGCACCTCCAACATGTCCTTTCCCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: NCCLRKICYDGC*LCTSNMSFPCS Trigger: GGAACAGGGAAAGGACATGTTGGAGGTGCAAAGTCAGCAACCATCGTAGCAGATCTTTCTGAGACAACAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041208.9 ENSMUST00000230239.2 |
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| CDS CCA 72 bp | TGCTTCAGGGAGGGAACTATAGTGCAGTTAGTTACTTaGGCAAATTCAGCAATCAGATCTTCACTCCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: CFREGTIVQLVT*ANSAIRSSLLR Trigger: TCTCAGGAGTGAAGATCTGATTGCTGAATTTGCCCAAGTAACTAACTGCACTATAGTTCCCTCCCTGAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231061.2 |
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