Pregenerated sensors for A4GNT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037953Ensembl transcript IDs: ENSMUST00000042553.8
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTTTCTTGCAGCTACAATCTAGCCAAGGGAGATACAAGGATACATaGTTTTTGCACTTATACCGTACATGCATAAAGTCGTATGAGATG | + |
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Preference number: 1 (lower is better) Translates to: SFLQLQSSQGRYKDT*FLHLYRTCIKSYEM Trigger: CATCTCATACGACTTTATGCATGTACGGTATAAGTGCAAAAACCATGTATCCTTGTATCTCCCTTGGCTAGATTGTAGCTGCAAGAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR TCA 90 bp | GGATACATGGTTTTTGCACTTATACCGTACATGCATAAAGTCGTATaGGATGCATTTTCTTTCCTTCTTCTGTCATCCTACTGTCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: GYMVFALIPYMHKVV*DAFSFLLLSSYCLE Trigger: TTCCAGACAGTAGGATGACAGAAGAAGGAAAGAAAATGCATCTCATACGACTTTATGCATGTACGGTATAAGTGCAAAAACCATGTATCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR GCA 90 bp | CAAGGGAGATACAAGGATACATGGTTTTTGCACTTATACCGTACATaGATAAAGTCGTATGAGATGCATTTTCTTTCCTTCTTCTGTCAT | + |
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Preference number: 1 (lower is better) Translates to: QGRYKDTWFLHLYRT*IKSYEMHFLSFFCH Trigger: ATGACAGAAGAAGGAAAGAAAATGCATCTCATACGACTTTATGCATGTACGGTATAAGTGCAAAAACCATGTATCCTTGTATCTCCCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTTGGAAAGGGGAAGTGTGGGGAAGGCAGCCTGTGAAGGGAGACAGTATCCTCAGGTCCCTTCATTCTaGCAGGTGTTAAAATTAATC | + |
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Preference number: 2 (lower is better) Translates to: VLERGSVGKAACEGRQYPQVPSF*QVLKLI Trigger: GATTAATTTTAACACCTGTCAGAATGAAGGGACCTG...AGGATACTGTCTCCCTTCACAGGCTGCCTTCCCCACACTTCCCCTTTCCAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTTAATCAACAGCTGGGGTAGTAAGATAAAGGTGTGTGTTGGAAAGGGGAAGGTTCCTGAGCTCCTCTaGCTTTCTGACTCGCCATGT | + |
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Preference number: 2 (lower is better) Translates to: LLINSWGSKIKVCVGKGKVPELL*LSDSPC Trigger: ACATGGCGAGTCAGAAAGCCAGAGGAGCTCAGGAAC...CTTCCCCTTTCCAACACACACCTTTATCTTACTACCCCAGCTGTTGATTAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR-3UTR CCA 90 bp | TTATACCTGGTTTTGTGTATTTCTAGCCCAGTCTCCATGTCATGGGAGGATTCCAAGAGGAAGCCTGAGTaGGCTATGGTGGCACATACC | + |
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Preference number: 2 (lower is better) Translates to: LYLVLCISSPVSMSWEDSKRKPE*AMVAHT Trigger: GGTATGTGCCACCATAGCCCACTCAGGCTTCCTCTT...GGAATCCTCCCATGACATGGAGACTGGGCTAGAAATACACAAAACCAGGTATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTTAATCAACAGCTGGGGTAGTAAGATAAAGGTGTGTGTTGGAAAGGGGAAGATCAAGGGCCAGGTGTaGTGGATGTCACATGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: LLINSWGSKIKVCVGKGKIKGQV*WMSHAF Trigger: AAAGGCATGTGACATCCATCACACCTGGCCCTTGAT...CTTCCCCTTTCCAACACACACCTTTATCTTACTACCCCAGCTGTTGATTAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTTAATCAACAGCTGGGGTAGTAAGATAAAGGTGTGTGTTGGAAAGGGGAAGCTTAGGAAAAAGGATTaGGAGTTTGAGGCCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LLINSWGSKIKVCVGKGKLRKKD*EFEACL Trigger: CAGGCAGGCCTCAAACTCTCAATCCTTTTTCCTAAG...CTTCCCCTTTCCAACACACACCTTTATCTTACTACCCCAGCTGTTGATTAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR-3UTR CCA 90 bp | TATACCTGGTTTTGTGTATTTCTAGCCCAGTCTCCATGTCATGGGAGGATTCCATTAATCCTGGGGGTGTaGATTAGCACCTATCCCCTA | + |
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Preference number: 2 (lower is better) Translates to: YTWFCVFLAQSPCHGRIPLILGV*ISTYPL Trigger: TAGGGGATAGGTGCTAATCCACACCCCCAGGATTAA...TGGAATCCTCCCATGACATGGAGACTGGGCTAGAAATACACAAAACCAGGTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR-3UTR CCA 90 bp | TTATACCTGGTTTTGTGTATTTCTAGCCCAGTCTCCATGTCATGGGAGGATTCCAGAAAGATTCTAGCATaGGCTTCCAACGGCCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LYLVLCISSPVSMSWEDSRKILA*ASNGQC Trigger: ACACTGGCCGTTGGAAGCCCATGCTAGAATCTTTCT...GGAATCCTCCCATGACATGGAGACTGGGCTAGAAATACACAAAACCAGGTATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR-3UTR CCA 90 bp | ATCAACAGCTGGGGTAGTAAGATAAAGGTGTGTGTTGGAAAGGGGAAGTGTGGGGCTGTAGTTTATACCTaGTTTTGTGTATTTCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: INSWGSKIKVCVGKGKCGAVVYT*FCVFLA Trigger: GGCTAGAAATACACAAAACCAGGTATAAACTACAGC...CCCACACTTCCCCTTTCCAACACACACCTTTATCTTACTACCCCAGCTGTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR-3UTR GCA 90 bp | AATGACAATAGAACAGTAAACAGAGCTCTTAGCTACCTCCCAGTCTTTCTTGCAATCTGCCCCCAGACTTaGTGTTCCATGAAGGATAAA | + |
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Preference number: 2 (lower is better) Translates to: NDNRTVNRALSYLPVFLAICPQT*CSMKDK Trigger: TTTATCCTTCATGGAACAGCAAGTCTGGGGGCAGAT...TGCAAGAAAGACTGGGAGGTAGCTAAGAGCTCTGTTTACTGTTCTATTGTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR TCA 72 bp | CCCAGCATAAGGGAGGTAGAGGCAGGAGGATCTCGGTaGGTTGGATACTATCCTGATCTTCATAGTGAGACC | + |
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Preference number: 3 (lower is better) Translates to: PSIREVEAGGSR*VGYYPDLHSET Trigger: GGTCTCACTATGAAGATCAGGATAGTATCCAACTCACCGAGATCCTCCTGCCTCTACCTCCCTTATGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR TCA 72 bp | GCAGCCTGTGAAGGGAGACAGTATCCTGAAGACAAGTaGCCAGGAATTAGGATACATGTGCTGGGACCAAGG | + |
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Preference number: 3 (lower is better) Translates to: AACEGRQYPEDK*PGIRIHVLGPR Trigger: CCTTGGTCCCAGCACATGTATCCTAATTCCTGGTCACTTGTCTTCAGGATACTGTCTCCCTTCACAGGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR CCA 72 bp | CAGCTACAATCTAGCCAAGGGAGATACAAGGATACATaGTTTTTGCACTTATACCGTACATGCATAAAGTCG | + |
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Preference number: 3 (lower is better) Translates to: QLQSSQGRYKDT*FLHLYRTCIKS Trigger: CGACTTTATGCATGTACGGTATAAGTGCAAAAACCATGTATCCTTGTATCTCCCTTGGCTAGATTGTAGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR GCA 72 bp | TACAAGGATACATGGTTTTTGCACTTATACCGTACATaGATAAAGTCGTATGAGATGCATTTTCTTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: YKDTWFLHLYRT*IKSYEMHFLSF Trigger: GAAGGAAAGAAAATGCATCTCATACGACTTTATGCATGTACGGTATAAGTGCAAAAACCATGTATCCTTGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR CCA 72 bp | GTTAATGAGTTAATGAACATTGCTGTAGTTTATACCTaGTTTTGTGTATTTCTAGCCCAGTCTCCATGTCAT | + |
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Preference number: 3 (lower is better) Translates to: VNELMNIAVVYT*FCVFLAQSPCH Trigger: ATGACATGGAGACTGGGCTAGAAATACACAAAACCAGGTATAAACTACAGCAATGTTCATTAACTCATTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR TCA 72 bp | AGTGCTTGGTACCCAGGAAGATCAATTAGTATGTACTaGGTTAATGAGTTAATGAACATTGCTGTAGTTTAT | + |
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Preference number: 3 (lower is better) Translates to: SAWYPGRSISMY*VNELMNIAVVY Trigger: ATAAACTACAGCAATGTTCATTAACTCATTAACTCAGTACATACTAATTGATCTTCCTGGGTACCAAGCACT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR CAA 72 bp | CTCTCTAGGGATGAGGAGGCGGGGAGGGGGCACGACTaGTTCCTGAGCTCCTCTGGCTTTCTGACTCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LSRDEEAGRGHD*FLSSSGFLTRH Trigger: ATGGCGAGTCAGAAAGCCAGAGGAGCTCAGGAACAAGTCGTGCCCCCTCCCCGCCTCCTCATCCCTAGAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR TCA 90 bp | GAGCTCCTCTGGCTTTCTGACTCGCCATGTGACATGTTCCCTGTCACTGTGATGCTCCGTACTTCCAGATaGTGGCCAGGCGGGCTGCGT | + |
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Preference number: 4 (lower is better) Translates to: ELLWLSDSPCDMFPVTVMLRTSR*WPGGLR Trigger: ACGCAGCCCGCCTGGCCATCATCTGGAAGTACGGAG...CATCACAGTGACAGGGAACATGTCACATGGCGAGTCAGAAAGCCAGAGGAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR GCA 90 bp | GAGCTCCTCTGGCTTTCTGACTCGCCATGTGACATGTTCCCTGTCACTGTGATGTCGGGAGCCCTGGGCTaGCAGGAAGTTCTCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: ELLWLSDSPCDMFPVTVMSGALG*QEVLLR Trigger: CCTGAGGAGAACTTCCTGGCAGCCCAGGGCTCCCGA...CATCACAGTGACAGGGAACATGTCACATGGCGAGTCAGAAAGCCAGAGGAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CCA 90 bp | CAATGTAGACCAAGCGAGAATGGGGTAGCCCAGGAAGCATCTACTCTTCCACAGCCTGGAACCTGTGCCTaGCTTCTTGGACACTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: QCRPSENGVAQEASTLPQPGTCA*LLGHCP Trigger: GGGACAGTGTCCAAGAAGCCAGGCACAGGTTCCAGG...CTGTGGAAGAGTAGATGCTTCCTGGGCTACCCCATTCTCGCTTGGTCTACATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CCA 90 bp | ATCAACAGCTGGGGTAGTAAGATAAAGGTGTGTGTTGGAAAGGGGAAGTGTGGGGCCCACAGGAAGGGGTaGTGGGGGAGGAACCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: INSWGSKIKVCVGKGKCGAHRKG*WGRNPN Trigger: ATTTGGGTTCCTCCCCCACCACCCCTTCCTGTGGGC...CCCACACTTCCCCTTTCCAACACACACCTTTATCTTACTACCCCAGCTGTTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CCA 90 bp | CAATGTAGACCAAGCGAGAATGGGGTAGCCCAGGAAGCATCTACTCTTCCACAGCTGTGCCTGGCTTCTTaGACACTGTCCCTTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: QCRPSENGVAQEASTLPQLCLAS*TLSLLH Trigger: GTGCAGAAGGGACAGTGTCCAAGAAGCCAGGCACAG...CTGTGGAAGAGTAGATGCTTCCTGGGCTACCCCATTCTCGCTTGGTCTACATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR TCA 90 bp | ATCAACAGCTGGGGTAGTAAGATAAAGGTGTGTGTTGGAAAGGGGAAGTGTGGGCAGTCCCTGTGGAAATaGGAAAGGAGGCAGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: INSWGSKIKVCVGKGKCGQSLWK*ERRQAG Trigger: GCCTGCCTGCCTCCTTTCTCATTTCCACAGGGACTG...CCCACACTTCCCCTTTCCAACACACACCTTTATCTTACTACCCCAGCTGTTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CCA 90 bp | GAGCTCCTCTGGCTTTCTGACTCGCCATGTGACATGTTCCCTGTCACTGTGATGATCAACTGGGGACCTTaGTTGCCCCAAATGGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: ELLWLSDSPCDMFPVTVMINWGP*LPQMVE Trigger: CTCAACCATTTGGGGCAACCAAGGTCCCCAGTTGAT...CATCACAGTGACAGGGAACATGTCACATGGCGAGTCAGAAAGCCAGAGGAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CCA 90 bp | GCACGACTTGTTCCTGAGCTCCTCTGGCTTTCTGACTCGCCATGTGACATGTTCAGGTCACCCAACCCGTaGAAGTCTTTAAGACGACAC | + |
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Preference number: 4 (lower is better) Translates to: ARLVPELLWLSDSPCDMFRSPNP*KSLRRH Trigger: GTGTCGTCTTAAAGACTTCCACGGGTTGGGTGACCT...GAACATGTCACATGGCGAGTCAGAAAGCCAGAGGAGCTCAGGAACAAGTCGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CCA 90 bp | ACCTGGTTTTGTGTATTTCTAGCCCAGTCTCCATGTCATGGGAGGATTCCATCACACAGGAAGGGGTGGTaGGGGAGGAACCCAAATACC | + |
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Preference number: 4 (lower is better) Translates to: TWFCVFLAQSPCHGRIPSHRKGW*GRNPNT Trigger: GGTATTTGGGTTCCTCCCCCACCACCCCTTCCTGTG...TGATGGAATCCTCCCATGACATGGAGACTGGGCTAGAAATACACAAAACCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR TCA 90 bp | TTATACCTGGTTTTGTGTATTTCTAGCCCAGTCTCCATGTCATGGGAGGATTCCTCCTCAGGGATGGGCTaGAGGGAGATGACGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LYLVLCISSPVSMSWEDSSSGMG*REMTSV Trigger: CACTGACGTCATCTCCCTTCAGCCCATCCCTGAGGA...GGAATCCTCCCATGACATGGAGACTGGGCTAGAAATACACAAAACCAGGTATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR GCA 90 bp | AAGGATACATGGTTTTTGCACTTATACCGTACATGCATAAAGTCGTATGAGATGGATGGCCAGGCGGGCTaGGTCGGAGCTGACGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KDTWFLHLYRTCIKSYEMDGQAG*VGADVE Trigger: CTCCACGTCAGCTCCGACGCAGCCCGCCTGGCCATC...CATCTCATACGACTTTATGCATGTACGGTATAAGTGCAAAAACCATGTATCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR TCA 90 bp | CAATGTAGACCAAGCGAGAATGGGGTAGCCCAGGAAGCATCTACTCTTCCACAGTCTCTGTACTGCTGTTaGCTTTTGTGTACCACGAAA | + |
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Preference number: 4 (lower is better) Translates to: QCRPSENGVAQEASTLPQSLYCC*LLCTTK Trigger: TTTCGTGGTACACAAAAGTCAACAGCAGTACAGAGA...CTGTGGAAGAGTAGATGCTTCCTGGGCTACCCCATTCTCGCTTGGTCTACATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR GCA 90 bp | CTCTTAATCAACAGCTGGGGTAGTAAGATAAAGGTGTGTGTTGGAAAGGGGAAGCTACAAAGTTCTCCATaGAGGCCCACAGGAAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LLINSWGSKIKVCVGKGKLQSSP*RPTGRG Trigger: ACCCCTTCCTGTGGGCCTGCATGGAGAACTTTGTAG...CTTCCCCTTTCCAACACACACCTTTATCTTACTACCCCAGCTGTTGATTAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CCA 90 bp | ATCAACAGCTGGGGTAGTAAGATAAAGGTGTGTGTTGGAAAGGGGAAGTGTGGGAGAAGGCTGGGTAGCTaGTATTTGAAGTCAGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: INSWGSKIKVCVGKGKCGRRLGS*YLKSAV Trigger: TACAGCTGACTTCAAATACCAGCTACCCAGCCTTCT...CCCACACTTCCCCTTTCCAACACACACCTTTATCTTACTACCCCAGCTGTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CCA 90 bp | TATACCTGGTTTTGTGTATTTCTAGCCCAGTCTCCATGTCATGGGAGGATTCCAATCCTTGTCATCAACTaGGGACCTTGGTTGCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: YTWFCVFLAQSPCHGRIPILVIN*GPWLPQ Trigger: TTGGGGCAACCAAGGTCCCCAGTTGATGACAAGGAT...TGGAATCCTCCCATGACATGGAGACTGGGCTAGAAATACACAAAACCAGGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CCA 90 bp | CTCTTAATCAACAGCTGGGGTAGTAAGATAAAGGTGTGTGTTGGAAAGGGGAAGCTTGGTTGCCCCAAATaGTTGAGTCATAGTGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: LLINSWGSKIKVCVGKGKLGCPK*LSHSAL Trigger: TAGAGCACTATGACTCAACCATTTGGGGCAACCAAG...CTTCCCCTTTCCAACACACACCTTTATCTTACTACCCCAGCTGTTGATTAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CCA 90 bp | CAGAGTCATCTGGGTCAAGAGCTCAGTCTCCAGTTCTATAAATATCTTTTCTTAACTGTGGATAAGGGATaGGGTAAAATCTCTGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: QSHLGQELSLQFYKYLFLTVDKG*GKISGD Trigger: ATCCCCAGAGATTTTACCCCATCCCTTATCCACAGT...TAAGAAAAGATATTTATAGAACTGGAGACTGAGCTCTTGACCCAGATGACTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| 3UTR CAA 72 bp | CATGGGAGGATTCCATCACAAGGAGTTAATGTACTTTaGATGGGATTCCAGTTAGTTCCTATAAAAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: HGRIPSQGVNVL*MGFQLVPIKRG Trigger: TCCTCTTTTTATAGGAACTAACTGGAATCCCATCAAAAGTACATTAACTCCTTGTGATGGAATCCTCCCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS TCA 90 bp | GATGCTTCGTCCACTCCTCAGGAGGCCGTCCAGTCCCTGTGGAAATaGGAAAGGAGGCAGGCAGGCAAAGAAGCACTGAGACCTCATGGT | + |
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Preference number: 5 (lower is better) Translates to: DASSTPQEAVQSLWK*ERRQAGKEALRPHG Trigger: ACCATGAGGTCTCAGTGCTTCTTTGCCTGCCTGCCTCCTTTCTCATTTCCACAGGGACTGGACGGCCTCCTGAGGAGTGGACGAAGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS CCA 90 bp | CCGTACTTCCAGATGATGGCCAGGCGGGCTGCGTCGGAGCTGACGTaGAGCCAGTGTTTCTCTGTACTGCTGTTGACTTTTGTGTACCAC | + |
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Preference number: 5 (lower is better) Translates to: PYFQMMARRAASELT*SQCFSVLLLTFVYH Trigger: GTGGTACACAAAAGTCAACAGCAGTACAGAGAAACACTGGCTCCACGTCAGCTCCGACGCAGCCCGCCTGGCCATCATCTGGAAGTACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS TCA 90 bp | AGTCCCTGTGGAAATGAGAAAGGAGGCAGGCAGGCAAAGAAGCACTaGGACCTCATGGTGAGCTGGTACAGCAGGCCACAGGCAAACACC | + |
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Preference number: 5 (lower is better) Translates to: SPCGNEKGGRQAKKH*DLMVSWYSRPQANT Trigger: GGTGTTTGCCTGTGGCCTGCTGTACCAGCTCACCATGAGGTCTCAGTGCTTCTTTGCCTGCCTGCCTCCTTTCTCATTTCCACAGGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS CCA 90 bp | CCCGTAACATCCTTGTCATCAACTGGGGACCTTGGTTGCCCCAAATaGTTGAGTCATAGTGCTCTACAAAGTTCTCCATGCAGGCCCACA | + |
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Preference number: 5 (lower is better) Translates to: PVTSLSSTGDLGCPK*LSHSALQSSPCRPT Trigger: TGTGGGCCTGCATGGAGAACTTTGTAGAGCACTATGACTCAACCATTTGGGGCAACCAAGGTCCCCAGTTGATGACAAGGATGTTACGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS GCA 90 bp | GACACCACACCCGTAACATCCTTGTCATCAACTGGGGACCTTGGTTaGCCCAAATGGTTGAGTCATAGTGCTCTACAAAGTTCTCCATGC | + |
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Preference number: 5 (lower is better) Translates to: DTTPVTSLSSTGDLG*PKWLSHSALQSSPC Trigger: GCATGGAGAACTTTGTAGAGCACTATGACTCAACCATTTGGGGCAACCAAGGTCCCCAGTTGATGACAAGGATGTTACGGGTGTGGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS CCA 90 bp | ATAGATTTTAGCAGCAGACTCCACAGCACAGGAGACCATCGGAGGTaGCTCCACCCTTTCAGAGGTCTCTATAAACATGATGCTTCGTCC | + |
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Preference number: 5 (lower is better) Translates to: IDFSSRLHSTGDHRR*LHPFRGLYKHDASS Trigger: GGACGAAGCATCATGTTTATAGAGACCTCTGAAAGGGTGGAGCCACCTCCGATGGTCTCCTGTGCTGTGGAGTCTGCTGCTAAAATCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CAA 90 bp | GAGCTCCTCTGGCTTTCTGACTCGCCATGTGACATGTTCCCTGTCACTGTGATGAACAAGGGTGTGTCTTaGAACAGTCTTTCCATGTCC | + |
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Preference number: 5 (lower is better) Translates to: ELLWLSDSPCDMFPVTVMNKGVS*NSLSMS Trigger: GGACATGGAAAGACTGTTCAAAGACACACCCTTGTT...CATCACAGTGACAGGGAACATGTCACATGGCGAGTCAGAAAGCCAGAGGAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CAA 90 bp | TTTCTTTCCTTCTTCTGTCATCCTACTGTCTGGAATAGCCCAAATGATGAGCTGCCTGTGCCTGGCTTCTaGGACACTGTCCCTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: FLSFFCHPTVWNSPNDELPVPGF*DTVPSA Trigger: TGCAGAAGGGACAGTGTCCAAGAAGCCAGGCACAGG...CAGCTCATCATTTGGGCTATTCCAGACAGTAGGATGACAGAAGAAGGAAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS TCA 90 bp | ATTATTAATGGCCGAGAGGAGGGAGAAGGCTGGGTAGCTGGTATTTaGAGTCAGCTGTACGGAGTCCCTGAGTCCTTTCATGAAGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: IINGREEGEGWVAGI*SQLYGVPESFHEED Trigger: ATCTTCTTCATGAAAGGACTCAGGGACTCCGTACAGCTGACTTCAAATACCAGCTACCCAGCCTTCTCCCTCCTCTCGGCCATTAATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CAA 90 bp | CTCTTAATCAACAGCTGGGGTAGTAAGATAAAGGTGTGTGTTGGAAAGGGGAAGAACTGGGGACCTTGGTaGCCCCAAATGGTTGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: LLINSWGSKIKVCVGKGKNWGPW*PQMVES Trigger: TGACTCAACCATTTGGGGCAACCAAGGTCCCCAGTT...CTTCCCCTTTCCAACACACACCTTTATCTTACTACCCCAGCTGTTGATTAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CAA 90 bp | TTTCTTTCCTTCTTCTGTCATCCTACTGTCTGGAATAGCCCAAATGATGAGCTGCTGGGTAGCTGGTATTaGAAGTCAGCTGTACGGAGT | + |
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Preference number: 5 (lower is better) Translates to: FLSFFCHPTVWNSPNDELLGSWY*KSAVRS Trigger: ACTCCGTACAGCTGACTTCAAATACCAGCTACCCAG...CAGCTCATCATTTGGGCTATTCCAGACAGTAGGATGACAGAAGAAGGAAAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CAA 90 bp | TATACCTGGTTTTGTGTATTTCTAGCCCAGTCTCCATGTCATGGGAGGATTCCAGGTTGCCCCAAATGGTaGAGTCATAGTGCTCTACAA | + |
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Preference number: 5 (lower is better) Translates to: YTWFCVFLAQSPCHGRIPGCPKW*SHSALQ Trigger: TTGTAGAGCACTATGACTCAACCATTTGGGGCAACC...TGGAATCCTCCCATGACATGGAGACTGGGCTAGAAATACACAAAACCAGGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS-3UTR CAA 90 bp | CAGAGTCATCTGGGTCAAGAGCTCAGTCTCCAGTTCTATAAATATCTTTTCTTACTTAGGACAGTGCTTTaGATAGAGATTTTCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: QSHLGQELSLQFYKYLFLLRTVL*IEIFHQ Trigger: CTGGTGGAAAATCTCTATCAAAAGCACTGTCCTAAG...TAAGAAAAGATATTTATAGAACTGGAGACTGAGCTCTTGACCCAGATGACTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS TCA 72 bp | GAGGCAGGCAGGCAAAGAAGCACTGAGACCTCATGGTaGGCTGGTACAGCAGGCCACAGGCAAACACCAGGA | + |
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Preference number: 6 (lower is better) Translates to: EAGRQRSTETSW*AGTAGHRQTPG Trigger: TCCTGGTGTTTGCCTGTGGCCTGCTGTACCAGCTCACCATGAGGTCTCAGTGCTTCTTTGCCTGCCTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS CCA 72 bp | CAGATGATGGCCAGGCGGGCTGCGTCGGAGCTGACGTaGAGCCAGTGTTTCTCTGTACTGCTGTTGACTTTT | + |
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Preference number: 6 (lower is better) Translates to: QMMARRAASELT*SQCFSVLLLTF Trigger: AAAAGTCAACAGCAGTACAGAGAAACACTGGCTCCACGTCAGCTCCGACGCAGCCCGCCTGGCCATCATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS TCA 72 bp | GGCCGAGAGGAGGGAGAAGGCTGGGTAGCTGGTATTTaGAGTCAGCTGTACGGAGTCCCTGAGTCCTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: GREEGEGWVAGI*SQLYGVPESFH Trigger: ATGAAAGGACTCAGGGACTCCGTACAGCTGACTTCAAATACCAGCTACCCAGCCTTCTCCCTCCTCTCGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS CCA 72 bp | AGCAGCAGACTCCACAGCACAGGAGACCATCGGAGGTaGCTCCACCCTTTCAGAGGTCTCTATAAACATGAT | + |
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Preference number: 6 (lower is better) Translates to: SSRLHSTGDHRR*LHPFRGLYKHD Trigger: ATCATGTTTATAGAGACCTCTGAAAGGGTGGAGCCACCTCCGATGGTCTCCTGTGCTGTGGAGTCTGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS CAA 72 bp | GTAGGACTCATTGAAGCTGGGCTCTTTGTCCCACACTaGGTAGTAGCGCTTCCACTGTGGATAAGGGATGGG | + |
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Preference number: 6 (lower is better) Translates to: VGLIEAGLFVPH*VVALPLWIRDG Trigger: CCCATCCCTTATCCACAGTGGAAGCGCTACTACCAAGTGTGGGACAAAGAGCCCAGCTTCAATGAGTCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS CAA 90 bp | GTAACATCCTTGTCATCAACTGGGGACCTTGGTTGCCCCAAATGGTaGAGTCATAGTGCTCTACAAAGTTCTCCATGCAGGCCCACAGGA | + |
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Preference number: 6 (lower is better) Translates to: VTSLSSTGDLGCPKW*SHSALQSSPCRPTG Trigger: TCCTGTGGGCCTGCATGGAGAACTTTGTAGAGCACTATGACTCAACCATTTGGGGCAACCAAGGTCCCCAGTTGATGACAAGGATGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS TCA 72 bp | TGTCATCAACTGGGGACCTTGGTTGCCCCAAATGGTTaGGTCATAGTGCTCTACAAAGTTCTCCATGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: CHQLGTLVAPNG*VIVLYKVLHAG Trigger: GCCTGCATGGAGAACTTTGTAGAGCACTATGACTCAACCATTTGGGGCAACCAAGGTCCCCAGTTGATGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS CAA 90 bp | CCTGGAACCTGTGCCTGGCTTCTTGGACACTGTCCCTTCTGCACCTaGAATCAGAACCCTATAAGTCTTAGGACAGTGCTTTTGATAGAG | + |
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Preference number: 6 (lower is better) Translates to: PGTCAWLLGHCPFCT*NQNPISLRTVLLIE Trigger: CTCTATCAAAAGCACTGTCCTAAGACTTATAGGGTTCTGATTCAAGGTGCAGAAGGGACAGTGTCCAAGAAGCCAGGCACAGGTTCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS GCA 72 bp | CCCGTAACATCCTTGTCATCAACTGGGGACCTTGGTTaGCCCAAATGGTTGAGTCATAGTGCTCTACAAAGT | + |
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Preference number: 6 (lower is better) Translates to: PVTSLSSTGDLG*PKWLSHSALQS Trigger: ACTTTGTAGAGCACTATGACTCAACCATTTGGGGCAACCAAGGTCCCCAGTTGATGACAAGGATGTTACGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS CCA 72 bp | TCCTTGTCATCAACTGGGGACCTTGGTTGCCCCAAATaGTTGAGTCATAGTGCTCTACAAAGTTCTCCATGC | + |
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Preference number: 6 (lower is better) Translates to: SLSSTGDLGCPK*LSHSALQSSPC Trigger: GCATGGAGAACTTTGTAGAGCACTATGACTCAACCATTTGGGGCAACCAAGGTCCCCAGTTGATGACAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS CAA 72 bp | TTGTCATCAACTGGGGACCTTGGTTGCCCCAAATGGTaGAGTCATAGTGCTCTACAAAGTTCTCCATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LSSTGDLGCPKW*SHSALQSSPCR Trigger: CCTGCATGGAGAACTTTGTAGAGCACTATGACTCAACCATTTGGGGCAACCAAGGTCCCCAGTTGATGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS CAA 72 bp | TGTGCCTGGCTTCTTGGACACTGTCCCTTCTGCACCTaGAATCAGAACCCTATAAGTCTTAGGACAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: CAWLLGHCPFCT*NQNPISLRTVL Trigger: AAGCACTGTCCTAAGACTTATAGGGTTCTGATTCAAGGTGCAGAAGGGACAGTGTCCAAGAAGCCAGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS CCA 72 bp | AAAGAAATATTCAAACACTTCAGGTCACCCAACCCGTaGAAGTCTTTAAGACGACACCACACCCGTAACATC | + |
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Preference number: 6 (lower is better) Translates to: KEIFKHFRSPNP*KSLRRHHTRNI Trigger: GATGTTACGGGTGTGGTGTCGTCTTAAAGACTTCCACGGGTTGGGTGACCTGAAGTGTTTGAATATTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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| CDS CAA 72 bp | TTGACTTTTGTGTACCACGAAAACAAGGGTGTGTCTTaGAACAGTCTTTCCATGTCCAAAGGCACAAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LTFVYHENKGVS*NSLSMSKGTKK Trigger: TTTCTTTGTGCCTTTGGACATGGAAAGACTGTTCAAAGACACACCCTTGTTTTCGTGGTACACAAAAGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042553.8 |
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