Pregenerated sensors for A4GALT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047878Ensembl transcript IDs: ENSMUST00000049530.14, ENSMUST00000164614.3, ENSMUST00000229687.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGCACTGTCCCAGGGGAGGAAAGATGGTGTTCCCAGGGAGCCCTaGCCCTCCCCTTGGGCTCATGAGGCTGAGAGAGCCAGGTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: RALSQGRKDGVPREP*PSPWAHEAERARSF Trigger: GAAGGACCTGGCTCTCTCAGCCTCATGAGCCCAAGGGGAGGGGCAGGGCTCCCTGGGAACACCATCTTTCCTCCCCTGGGACAGTGCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAGATGGTGTTCCCAGGGAGCCCTGCCCCTCCCCTTGGGCTCATGAGGCTCCATCGGTCTCCCTTTaGCTTAGAGGGGCAGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: RKDGVPREPCPSPWAHEAPSVSL*LRGAGV Trigger: TACACCTGCCCCTCTAAGCCAAAGGGAGACCGATGG...AGCCTCATGAGCCCAAGGGGAGGGGCAGGGCTCCCTGGGAACACCATCTTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAGATGGTGTTCCCAGGGAGCCCTGCCCCTCCCCTTGGGCTCATGAGGCTCTCATCTTGTCTCCCTaGAAAGGCGGTAACAATGTT | + |
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Preference number: 2 (lower is better) Translates to: RKDGVPREPCPSPWAHEALILSP*KGGNNV Trigger: AACATTGTTACCGCCTTTCCAGGGAGACAAGATGAG...AGCCTCATGAGCCCAAGGGGAGGGGCAGGGCTCCCTGGGAACACCATCTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| 3UTR-3UTR TCA 90 bp | GGGGCAGGTGTAGAACTGGCAAGTGTTCCCCAGGCCAGCTTGGTCTCCTCTAAAGTAACAATGTTGATATaGTATGACTGCAGCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: GAGVELASVPQASLVSSKVTMLI*YDCSLK Trigger: CTTCAGGCTGCAGTCATATCATATCAACATTGTTAC...TTTAGAGGAGACCAAGCTGGCCTGGGGAACACTTGCCAGTTCTACACCTGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| 3UTR-3UTR CCA 90 bp | TCACTGGTCAGCCTAGAACACCGGACAAAGTGTTCTCCATCGGTCTCCCTTTGGCTCATCTTGTCTCCCTaGAAAGGCGGTAACAATGTT | + |
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Preference number: 2 (lower is better) Translates to: SLVSLEHRTKCSPSVSLWLILSP*KGGNNV Trigger: AACATTGTTACCGCCTTTCCAGGGAGACAAGATGAG...CCAAAGGGAGACCGATGGAGAACACTTTGTCCGGTGTTCTAGGCTGACCAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGACCCCACCTCTAACCAGCTGTCTTCCAGCTACCTTAGAATGCTCTTTAGTGTAACAATGTTGATATaGTATGACTGCAGCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: PDPTSNQLSSSYLRMLFSVTMLI*YDCSLK Trigger: CTTCAGGCTGCAGTCATATCATATCAACATTGTTAC...ACTAAAGAGCATTCTAAGGTAGCTGGAAGACAGCTGGTTAGAGGTGGGGTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| 3UTR-3UTR CAA 90 bp | GCCCCAGATGTTAGTAATTCTGTAATCACTGGTCAGCCTAGAACACCGGACAAACCCTGTCTGCTCATCTaGTCTCCCTGGAAAGGCGGT | + |
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Preference number: 3 (lower is better) Translates to: APDVSNSVITGQPRTPDKPCLLI*SPWKGG Trigger: ACCGCCTTTCCAGGGAGACAAGATGAGCAGACAGGG...TTTGTCCGGTGTTCTAGGCTGACCAGTGATTACAGAATTACTAACATCTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR TCA 90 bp | AGGAAAGATGGTGTTCCCAGGGAGCCCTGCCCCTCCCCTTGGGCTCATGAGGCTGTCTGGGGGTGCCCCTaGGCATCCGCAGCAGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: RKDGVPREPCPSPWAHEAVWGCP*ASAAGS Trigger: ACTGCCTGCTGCGGATGCTCAGGGGCACCCCCAGAC...AGCCTCATGAGCCCAAGGGGAGGGGCAGGGCTCCCTGGGAACACCATCTTTCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CCA 90 bp | GGAAAGATGGTGTTCCCAGGGAGCCCTGCCCCTCCCCTTGGGCTCATGAGGCTGAGTTCTGCCAGGGGATaGGGTAGAAGGCCTCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GKMVFPGSPAPPLGLMRLSSARG*GRRPRG Trigger: CCCCCGAGGCCTTCTACCCCATCCCCTGGCAGAACT...CAGCCTCATGAGCCCAAGGGGAGGGGCAGGGCTCCCTGGGAACACCATCTTTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR TCA 90 bp | TCTACACAGGTTTTCAGAGCTCCGCTCCTGACCCCACCTCTAACCAGCTGTCTTGTCTGGGGGTGCCCCTaGGCATCCGCAGCAGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: STQVFRAPLLTPPLTSCLVWGCP*ASAAGS Trigger: ACTGCCTGCTGCGGATGCTCAGGGGCACCCCCAGAC...AAGACAGCTGGTTAGAGGTGGGGTCAGGAGCGGAGCTCTGAAAACCTGTGTAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR GCA 90 bp | GGAAAGATGGTGTTCCCAGGGAGCCCTGCCCCTCCCCTTGGGCTCATGAGGCTGTCTTTGGTCCTTGGGTaGACCCACAGTGTGCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: GKMVFPGSPAPPLGLMRLSLVLG*THSVPV Trigger: TACTGGCACACTGTGGGTGCACCCAAGGACCAAAGA...CAGCCTCATGAGCCCAAGGGGAGGGGCAGGGCTCCCTGGGAACACCATCTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CCA 90 bp | AGGAAAGATGGTGTTCCCAGGGAGCCCTGCCCCTCCCCTTGGGCTCATGAGGCTCTAGGAAAGGCCAGCTaGGGGCAGGAGAAGTCTACT | + |
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Preference number: 4 (lower is better) Translates to: RKDGVPREPCPSPWAHEALGKAS*GQEKST Trigger: AGTAGACTTCTCCTGCCCCCAGCTGGCCTTTCCTAG...AGCCTCATGAGCCCAAGGGGAGGGGCAGGGCTCCCTGGGAACACCATCTTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CCA 90 bp | GGAAAGATGGTGTTCCCAGGGAGCCCTGCCCCTCCCCTTGGGCTCATGAGGCTGGTACCAGGCTGCCAGTaGTGTGTCCTCAAACAGTTC | + |
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Preference number: 4 (lower is better) Translates to: GKMVFPGSPAPPLGLMRLVPGCQ*CVLKQF Trigger: GAACTGTTTGAGGACACACCACTGGCAGCCTGGTAC...CAGCCTCATGAGCCCAAGGGGAGGGGCAGGGCTCCCTGGGAACACCATCTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR GCA 90 bp | TACGCCTTTAATCCCAGCACTGGGAGGGCTTCTGAGTTCGAGGCCAGCCTGGTCCATAGCGGGATTGGATaGCCAGCGTGTTGGTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: YAFNPSTGRASEFEASLVHSGIG*PACWSG Trigger: ACCTGACCAACACGCTGGGCATCCAATCCCGCTATG...GACCAGGCTGGCCTCGAACTCAGAAGCCCTCCCAGTGCTGGGATTAAAGGCGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CCA 90 bp | TACGCCTTTAATCCCAGCACTGGGAGGGCTTCTGAGTTCGAGGCCAGCCTGGTCGCAGAGCCTTGGATGTaGCCTCTAGGTGTGTACCCT | + |
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Preference number: 4 (lower is better) Translates to: YAFNPSTGRASEFEASLVAEPWM*PLGVYP Trigger: AGGGTACACACCTAGAGGCCACATCCAAGGCTCTGC...GACCAGGCTGGCCTCGAACTCAGAAGCCCTCCCAGTGCTGGGATTAAAGGCGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR TCA 90 bp | TCTACACAGGTTTTCAGAGCTCCGCTCCTGACCCCACCTCTAACCAGCTGTCTTCAGCATAGGTGGCATTaGGCAGCTGGGTCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: STQVFRAPLLTPPLTSCLQHRWH*AAGSAP Trigger: AGGAGCTGACCCAGCTGCTCAATGCCACCTATGCTG...AAGACAGCTGGTTAGAGGTGGGGTCAGGAGCGGAGCTCTGAAAACCTGTGTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CCA 90 bp | CCTGACCCCACCTCTAACCAGCTGTCTTCCAGCTACCTTAGAATGCTCTTTAGTAGTTCTGCCAGGGGATaGGGTAGAAGGCCTCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: PDPTSNQLSSSYLRMLFSSSARG*GRRPRG Trigger: CCCCCGAGGCCTTCTACCCCATCCCCTGGCAGAACT...ACTAAAGAGCATTCTAAGGTAGCTGGAAGACAGCTGGTTAGAGGTGGGGTCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR TCA 90 bp | CAAGTGTTCCCCAGGCCAGCTTGGTCTCCTCTAAAGTCAACAGCAGCATCTCAACAGCATAGGTGGCATTaGGCAGCTGGGTCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QVFPRPAWSPLKSTAASQQHRWH*AAGSAP Trigger: AGGAGCTGACCCAGCTGCTCAATGCCACCTATGCTG...TTGAGATGCTGCTGTTGACTTTAGAGGAGACCAAGCTGGCCTGGGGAACACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CCA 90 bp | TCTACACAGGTTTTCAGAGCTCCGCTCCTGACCCCACCTCTAACCAGCTGTCTTCTAGGAAAGGCCAGCTaGGGGCAGGAGAAGTCTACT | + |
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Preference number: 4 (lower is better) Translates to: STQVFRAPLLTPPLTSCLLGKAS*GQEKST Trigger: AGTAGACTTCTCCTGCCCCCAGCTGGCCTTTCCTAG...AAGACAGCTGGTTAGAGGTGGGGTCAGGAGCGGAGCTCTGAAAACCTGTGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR GCA 90 bp | TCACTGGTCAGCCTAGAACACCGGACAAAGTGTTCTCCATCGGTCTCCCTTTGGTCTTTGGTCCTTGGGTaGACCCACAGTGTGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLVSLEHRTKCSPSVSLWSLVLG*THSVPV Trigger: TACTGGCACACTGTGGGTGCACCCAAGGACCAAAGA...CCAAAGGGAGACCGATGGAGAACACTTTGTCCGGTGTTCTAGGCTGACCAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR TCA 90 bp | GGGGCAGGTGTAGAACTGGCAAGTGTTCCCCAGGCCAGCTTGGTCTCCTCTAAATCTAGGTGTGTACCCTaGCTTTTCTTGTTCCACACA | + |
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Preference number: 4 (lower is better) Translates to: GAGVELASVPQASLVSSKSRCVP*LFLFHT Trigger: TGTGTGGAACAAGAAAAGTCAGGGTACACACCTAGA...TTTAGAGGAGACCAAGCTGGCCTGGGGAACACTTGCCAGTTCTACACCTGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR GCA 90 bp | CTGGCAAGTGTTCCCCAGGCCAGCTTGGTCTCCTCTAAAGTCAACAGCAGCATCAAACTTCCAGAGGAGTaGGATCCTGGAAGCATCAGA | + |
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Preference number: 4 (lower is better) Translates to: LASVPQASLVSSKVNSSIKLPEE*DPGSIR Trigger: TCTGATGCTTCCAGGATCGCACTCCTCTGGAAGTTT...GATGCTGCTGTTGACTTTAGAGGAGACCAAGCTGGCCTGGGGAACACTTGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR GCA 90 bp | CCTGACCCCACCTCTAACCAGCTGTCTTCCAGCTACCTTAGAATGCTCTTTAGTCATAGCGGGATTGGATaGCCAGCGTGTTGGTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: PDPTSNQLSSSYLRMLFSHSGIG*PACWSG Trigger: ACCTGACCAACACGCTGGGCATCCAATCCCGCTATG...ACTAAAGAGCATTCTAAGGTAGCTGGAAGACAGCTGGTTAGAGGTGGGGTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR TCA 90 bp | TCCTTCTCCCTCAGCATTTCTACACAGGTTTTCAGAGCTCCGCTCCTGACCCCATCAGCTCCTCGGGGCTaGTGTCTTCAAAGTATTTCT | + |
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Preference number: 4 (lower is better) Translates to: SFSLSISTQVFRAPLLTPSAPRG*CLQSIS Trigger: AGAAATACTTTGAAGACATCAGCCCCGAGGAGCTGA...TGGGGTCAGGAGCGGAGCTCTGAAAACCTGTGTAGAAATGCTGAGGGAGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CCA 90 bp | TCTACACAGGTTTTCAGAGCTCCGCTCCTGACCCCACCTCTAACCAGCTGTCTTGAAGAAGATGTTGCCTaGGGCAGAGACTCTAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: STQVFRAPLLTPPLTSCLEEDVA*GRDSRK Trigger: TTTCCTAGAGTCTCTGCCCCAGGCAACATCTTCTTC...AAGACAGCTGGTTAGAGGTGGGGTCAGGAGCGGAGCTCTGAAAACCTGTGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CCA 90 bp | TCTACACAGGTTTTCAGAGCTCCGCTCCTGACCCCACCTCTAACCAGCTGTCTTCTCTTTTCCAGGCTTTaGATGGAACACCACTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: STQVFRAPLLTPPLTSCLLFSRL*MEHHFL Trigger: CAAGAAGTGGTGTTCCATCCAAAGCCTGGAAAAGAG...AAGACAGCTGGTTAGAGGTGGGGTCAGGAGCGGAGCTCTGAAAACCTGTGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CCA 90 bp | CCCTGTCTGCTCATCTTGTCTCCCTGGAAAGGCGGTAACAATGTTGATATGATAGCAGAGCCTTGGATGTaGCCTCTAGGTGTGTACCCT | + |
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Preference number: 4 (lower is better) Translates to: PCLLILSPWKGGNNVDMIAEPWM*PLGVYP Trigger: AGGGTACACACCTAGAGGCCACATCCAAGGCTCTGC...TATCATATCAACATTGTTACCGCCTTTCCAGGGAGACAAGATGAGCAGACAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR TCA 90 bp | CAAGTGTTCCCCAGGCCAGCTTGGTCTCCTCTAAAGTCAACAGCAGCATCTCAATCTAGGTGTGTACCCTaGCTTTTCTTGTTCCACACA | + |
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Preference number: 4 (lower is better) Translates to: QVFPRPAWSPLKSTAASQSRCVP*LFLFHT Trigger: TGTGTGGAACAAGAAAAGTCAGGGTACACACCTAGA...TTGAGATGCTGCTGTTGACTTTAGAGGAGACCAAGCTGGCCTGGGGAACACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CCA 90 bp | CCCTGTCTGCTCATCTTGTCTCCCTGGAAAGGCGGTAACAATGTTGATATGATAGTACCAGGCTGCCAGTaGTGTGTCCTCAAACAGTTC | + |
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Preference number: 4 (lower is better) Translates to: PCLLILSPWKGGNNVDMIVPGCQ*CVLKQF Trigger: GAACTGTTTGAGGACACACCACTGGCAGCCTGGTAC...TATCATATCAACATTGTTACCGCCTTTCCAGGGAGACAAGATGAGCAGACAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| 3UTR CAA 72 bp | GCATCTCAAAGGCCCCTTTTTCCCTGTCTGCTCATCTaGTCTCCCTGGAAAGGCGGTAACAATGTTGATATG | + |
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Preference number: 4 (lower is better) Translates to: ASQRPLFPCLLI*SPWKGGNNVDM Trigger: CATATCAACATTGTTACCGCCTTTCCAGGGAGACAAGATGAGCAGACAGGGAAAAAGGGGCCTTTGAGATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR GCA 90 bp | CCTGACCCCACCTCTAACCAGCTGTCTTCCAGCTACCTTAGAATGCTCTTTAGTTCCTCAAACAGTTCTTaGAAGTCCAGAGGTCGTATC | + |
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Preference number: 4 (lower is better) Translates to: PDPTSNQLSSSYLRMLFSSSNSS*KSRGRI Trigger: GATACGACCTCTGGACTTGCAAGAACTGTTTGAGGA...ACTAAAGAGCATTCTAAGGTAGCTGGAAGACAGCTGGTTAGAGGTGGGGTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR GCA 90 bp | GTCTCCTCTAAAGTCAACAGCAGCATCTCAAAGGCCCCTTTTTCCCTGTCTGCTTCCTCAAACAGTTCTTaGAAGTCCAGAGGTCGTATC | + |
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Preference number: 4 (lower is better) Translates to: VSSKVNSSISKAPFSLSASSNSS*KSRGRI Trigger: GATACGACCTCTGGACTTGCAAGAACTGTTTGAGGA...AGCAGACAGGGAAAAAGGGGCCTTTGAGATGCTGCTGTTGACTTTAGAGGAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CCA 90 bp | GCCCCAGATGTTAGTAATTCTGTAATCACTGGTCAGCCTAGAACACCGGACAAACTCTTTTCCAGGCTTTaGATGGAACACCACTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: APDVSNSVITGQPRTPDKLFSRL*MEHHFL Trigger: CAAGAAGTGGTGTTCCATCCAAAGCCTGGAAAAGAG...TTTGTCCGGTGTTCTAGGCTGACCAGTGATTACAGAATTACTAACATCTGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS GCA 90 bp | CAACTGGTAGGGCTCCCATCTGTGCCGTGCCTCCGAGTACCAGGCTaGCAGTGGTGTGTCCTCAAACAGTTCTTGCAAGTCCAGAGGTCG | + |
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Preference number: 5 (lower is better) Translates to: QLVGLPSVPCLRVPG*QWCVLKQFLQVQRS Trigger: CGACCTCTGGACTTGCAAGAACTGTTTGAGGACACACCACTGGCAGCCTGGTACTCGGAGGCACGGCACAGATGGGAGCCCTACCAGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS GCA 90 bp | AGCATCAGACAGTACGGGCAACTGGTAGGGCTCCCATCTGTGCCGTaGCTCCGAGTACCAGGCTGCCAGTGGTGTGTCCTCAAACAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SIRQYGQLVGLPSVP*LRVPGCQWCVLKQF Trigger: GAACTGTTTGAGGACACACCACTGGCAGCCTGGTACTCGGAGGCACGGCACAGATGGGAGCCCTACCAGTTGCCCGTACTGTCTGATGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | GGGGCAGGTGTAGAACTGGCAAGTGTTCCCCAGGCCAGCTTGGTCTCCTCTAAATGGGCCAGCAGAGCCTaGGATGTGGCCTCTAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: GAGVELASVPQASLVSSKWASRA*DVASRC Trigger: ACACCTAGAGGCCACATCCAAGGCTCTGCTGGCCCA...TTTAGAGGAGACCAAGCTGGCCTGGGGAACACTTGCCAGTTCTACACCTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CCA 90 bp | GTAGGGCTCCCATCTGTGCCGTGCCTCCGAGTACCAGGCTGCCAGTaGTGTGTCCTCAAACAGTTCTTGCAAGTCCAGAGGTCGTATCCA | + |
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Preference number: 5 (lower is better) Translates to: VGLPSVPCLRVPGCQ*CVLKQFLQVQRSYP Trigger: TGGATACGACCTCTGGACTTGCAAGAACTGTTTGAGGACACACCACTGGCAGCCTGGTACTCGGAGGCACGGCACAGATGGGAGCCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CCA 90 bp | GGCAGGGCAGTGACCCCACGGCAAGCATGGCTCTTTTCCAGGCTTTaGATGGAACACCACTTCTTGAAGACTCGGGTAAGCAGTTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: GRAVTPRQAWLFSRL*MEHHFLKTRVSSWG Trigger: CCCCCAACTGCTTACCCGAGTCTTCAAGAAGTGGTGTTCCATCCAAAGCCTGGAAAAGAGCCATGCTTGCCGTGGGGTCACTGCCCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | TCCTTCTCCCTCAGCATTTCTACACAGGTTTTCAGAGCTCCGCTCCTGACCCCATGGGCCAGCAGAGCCTaGGATGTGGCCTCTAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: SFSLSISTQVFRAPLLTPWASRA*DVASRC Trigger: ACACCTAGAGGCCACATCCAAGGCTCTGCTGGCCCA...TGGGGTCAGGAGCGGAGCTCTGAAAACCTGTGTAGAAATGCTGAGGGAGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS TCA 90 bp | ACATTAGGAAAACAGCTCAGAAGAGAGATGCCGAGGTTCCGGGGCTaGGCTGTGGTGTCCCTAGGCAGCCCTTTCATCAGCACAACCACC | + |
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Preference number: 5 (lower is better) Translates to: TLGKQLRREMPRFRG*AVVSLGSPFISTTT Trigger: GGTGGTTGTGCTGATGAAAGGGCTGCCTAGGGACACCACAGCTCAGCCCCGGAACCTCGGCATCTCTCTTCTGAGCTGTTTTCCTAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CCA 90 bp | CTGTGTCCAGGTAGATCCCACCAAACTTCCAGAGGAGTGCGATCCTaGAAGCATCAGACAGTACGGGCAACTGGTAGGGCTCCCATCTGT | + |
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Preference number: 5 (lower is better) Translates to: LCPGRSHQTSRGVRS*KHQTVRATGRAPIC Trigger: ACAGATGGGAGCCCTACCAGTTGCCCGTACTGTCTGATGCTTCCAGGATCGCACTCCTCTGGAAGTTTGGTGGGATCTACCTGGACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | TACGCCTTTAATCCCAGCACTGGGAGGGCTTCTGAGTTCGAGGCCAGCCTGGTCTCTAGGAAGAAGATGTaGCCTGGGGCAGAGACTCTA | + |
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Preference number: 5 (lower is better) Translates to: YAFNPSTGRASEFEASLVSRKKM*PGAETL Trigger: TAGAGTCTCTGCCCCAGGCAACATCTTCTTCCTAGA...GACCAGGCTGGCCTCGAACTCAGAAGCCCTCCCAGTGCTGGGATTAAAGGCGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | TCCTTCTCCCTCAGCATTTCTACACAGGTTTTCAGAGCTCCGCTCCTGACCCCAGAGGACATAGCGGGATaGGATGCCCAGCGTGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: SFSLSISTQVFRAPLLTPEDIAG*DAQRVG Trigger: ACCAACACGCTGGGCATCCAATCCCGCTATGTCCTC...TGGGGTCAGGAGCGGAGCTCTGAAAACCTGTGTAGAAATGCTGAGGGAGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS GCA 90 bp | GATGAAGTCTGTGTCCAGGTAGATCCCACCAAACTTCCAGAGGAGTaGGATCCTGGAAGCATCAGACAGTACGGGCAACTGGTAGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: DEVCVQVDPTKLPEE*DPGSIRQYGQLVGL Trigger: GAGCCCTACCAGTTGCCCGTACTGTCTGATGCTTCCAGGATCGCACTCCTCTGGAAGTTTGGTGGGATCTACCTGGACACAGACTTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CCA 90 bp | GGGGGCAGGAGAAGTCTACTGGCAGGCTATACTCTCTTTGGTCCTTaGGTGCACCCACAGTGTGCCAGTAGATCAGGATGGAGATCAAGA | + |
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Preference number: 5 (lower is better) Translates to: GGRRSLLAGYTLFGP*VHPQCASRSGWRSR Trigger: TCTTGATCTCCATCCTGATCTACTGGCACACTGTGGGTGCACCCAAGGACCAAAGAGAGTATAGCCTGCCAGTAGACTTCTCCTGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 ENSMUST00000229687.2 |
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| CDS-3UTR CAA 90 bp | TCTACACAGGTTTTCAGAGCTCCGCTCCTGACCCCACCTCTAACCAGCTGTCTTAGCGTGTTGGTCAGGTaGAGCAGGTTCTTGAGGACG | + |
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Preference number: 5 (lower is better) Translates to: STQVFRAPLLTPPLTSCLSVLVR*SRFLRT Trigger: CGTCCTCAAGAACCTGCTCAACCTGACCAACACGCT...AAGACAGCTGGTTAGAGGTGGGGTCAGGAGCGGAGCTCTGAAAACCTGTGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | TCTACACAGGTTTTCAGAGCTCCGCTCCTGACCCCACCTCTAACCAGCTGTCTTGCCAAGAACTCATGCTaGCGCTCGAAGGCTAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: STQVFRAPLLTPPLTSCLAKNSC*RSKARK Trigger: CTTCCTAGCCTTCGAGCGCAAGCATGAGTTCTTGGC...AAGACAGCTGGTTAGAGGTGGGGTCAGGAGCGGAGCTCTGAAAACCTGTGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | CAAGTGTTCCCCAGGCCAGCTTGGTCTCCTCTAAAGTCAACAGCAGCATCTCAACAGGCTATACTCTCTTaGGTCCTTGGGTGCACCCAC | + |
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Preference number: 5 (lower is better) Translates to: QVFPRPAWSPLKSTAASQQAILS*VLGCTH Trigger: GTGGGTGCACCCAAGGACCAAAGAGAGTATAGCCTG...TTGAGATGCTGCTGTTGACTTTAGAGGAGACCAAGCTGGCCTGGGGAACACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | CCTGACCCCACCTCTAACCAGCTGTCTTCCAGCTACCTTAGAATGCTCTTTAGTCAGGCTATACTCTCTTaGGTCCTTGGGTGCACCCAC | + |
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Preference number: 5 (lower is better) Translates to: PDPTSNQLSSSYLRMLFSQAILS*VLGCTH Trigger: GTGGGTGCACCCAAGGACCAAAGAGAGTATAGCCTG...ACTAAAGAGCATTCTAAGGTAGCTGGAAGACAGCTGGTTAGAGGTGGGGTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | TCACTGGTCAGCCTAGAACACCGGACAAAGTGTTCTCCATCGGTCTCCCTTTGGTCTAGGAAGAAGATGTaGCCTGGGGCAGAGACTCTA | + |
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Preference number: 5 (lower is better) Translates to: SLVSLEHRTKCSPSVSLWSRKKM*PGAETL Trigger: TAGAGTCTCTGCCCCAGGCAACATCTTCTTCCTAGA...CCAAAGGGAGACCGATGGAGAACACTTTGTCCGGTGTTCTAGGCTGACCAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | TCTACACAGGTTTTCAGAGCTCCGCTCCTGACCCCACCTCTAACCAGCTGTCTTAGGTTGAGCAGGTTCTaGAGGACGATGAAGTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: STQVFRAPLLTPPLTSCLRLSRF*RTMKSV Trigger: CACAGACTTCATCGTCCTCAAGAACCTGCTCAACCT...AAGACAGCTGGTTAGAGGTGGGGTCAGGAGCGGAGCTCTGAAAACCTGTGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | CCTGACCCCACCTCTAACCAGCTGTCTTCCAGCTACCTTAGAATGCTCTTTAGTAGCGTGTTGGTCAGGTaGAGCAGGTTCTTGAGGACG | + |
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Preference number: 5 (lower is better) Translates to: PDPTSNQLSSSYLRMLFSSVLVR*SRFLRT Trigger: CGTCCTCAAGAACCTGCTCAACCTGACCAACACGCT...ACTAAAGAGCATTCTAAGGTAGCTGGAAGACAGCTGGTTAGAGGTGGGGTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | GTCTCCTCTAAAGTCAACAGCAGCATCTCAAAGGCCCCTTTTTCCCTGTCTGCTGCCAAGAACTCATGCTaGCGCTCGAAGGCTAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: VSSKVNSSISKAPFSLSAAKNSC*RSKARK Trigger: CTTCCTAGCCTTCGAGCGCAAGCATGAGTTCTTGGC...AGCAGACAGGGAAAAAGGGGCCTTTGAGATGCTGCTGTTGACTTTAGAGGAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS GCA 90 bp | GCAGGAGAAGTCTACTGGCAGGCTATACTCTCTTTGGTCCTTGGGTaGACCCACAGTGTGCCAGTAGATCAGGATGGAGATCAAGAACAT | + |
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Preference number: 5 (lower is better) Translates to: AGEVYWQAILSLVLG*THSVPVDQDGDQEH Trigger: ATGTTCTTGATCTCCATCCTGATCTACTGGCACACTGTGGGTGCACCCAAGGACCAAAGAGAGTATAGCCTGCCAGTAGACTTCTCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 ENSMUST00000229687.2 |
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| CDS-3UTR CAA 90 bp | TCACTGGTCAGCCTAGAACACCGGACAAAGTGTTCTCCATCGGTCTCCCTTTGGGTCCTCAAACAGTTCTaGCAAGTCCAGAGGTCGTAT | + |
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Preference number: 5 (lower is better) Translates to: SLVSLEHRTKCSPSVSLWVLKQF*QVQRSY Trigger: ATACGACCTCTGGACTTGCAAGAACTGTTTGAGGAC...CCAAAGGGAGACCGATGGAGAACACTTTGTCCGGTGTTCTAGGCTGACCAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | CAAGTGTTCCCCAGGCCAGCTTGGTCTCCTCTAAAGTCAACAGCAGCATCTCAAAGGTTGAGCAGGTTCTaGAGGACGATGAAGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QVFPRPAWSPLKSTAASQRLSRF*RTMKSV Trigger: CACAGACTTCATCGTCCTCAAGAACCTGCTCAACCT...TTGAGATGCTGCTGTTGACTTTAGAGGAGACCAAGCTGGCCTGGGGAACACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | GCCCCAGATGTTAGTAATTCTGTAATCACTGGTCAGCCTAGAACACCGGACAAAGAGGACATAGCGGGATaGGATGCCCAGCGTGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: APDVSNSVITGQPRTPDKEDIAG*DAQRVG Trigger: ACCAACACGCTGGGCATCCAATCCCGCTATGTCCTC...TTTGTCCGGTGTTCTAGGCTGACCAGTGATTACAGAATTACTAACATCTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | TCACTGGTCAGCCTAGAACACCGGACAAAGTGTTCTCCATCGGTCTCCCTTTGGATGGAACACCACTTCTaGAAGACTCGGGTAAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: SLVSLEHRTKCSPSVSLWMEHHF*KTRVSS Trigger: ACTGCTTACCCGAGTCTTCAAGAAGTGGTGTTCCAT...CCAAAGGGAGACCGATGGAGAACACTTTGTCCGGTGTTCTAGGCTGACCAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | TCACTGGTCAGCCTAGAACACCGGACAAAGTGTTCTCCATCGGTCTCCCTTTGGGCTCTTTTCCAGGCTTaGGATGGAACACCACTTCTT | + |
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Preference number: 5 (lower is better) Translates to: SLVSLEHRTKCSPSVSLWALFQA*DGTPLL Trigger: AAGAAGTGGTGTTCCATCCAAAGCCTGGAAAAGAGC...CCAAAGGGAGACCGATGGAGAACACTTTGTCCGGTGTTCTAGGCTGACCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | CCTGACCCCACCTCTAACCAGCTGTCTTCCAGCTACCTTAGAATGCTCTTTAGTATGGAACACCACTTCTaGAAGACTCGGGTAAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PDPTSNQLSSSYLRMLFSMEHHF*KTRVSS Trigger: ACTGCTTACCCGAGTCTTCAAGAAGTGGTGTTCCAT...ACTAAAGAGCATTCTAAGGTAGCTGGAAGACAGCTGGTTAGAGGTGGGGTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS-3UTR CAA 90 bp | GCCCCAGATGTTAGTAATTCTGTAATCACTGGTCAGCCTAGAACACCGGACAAAGCTCTTTTCCAGGCTTaGGATGGAACACCACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: APDVSNSVITGQPRTPDKALFQA*DGTPLL Trigger: AAGAAGTGGTGTTCCATCCAAAGCCTGGAAAAGAGC...TTTGTCCGGTGTTCTAGGCTGACCAGTGATTACAGAATTACTAACATCTGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS GCA 72 bp | CAGTACGGGCAACTGGTAGGGCTCCCATCTGTGCCGTaGCTCCGAGTACCAGGCTGCCAGTGGTGTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: QYGQLVGLPSVP*LRVPGCQWCVL Trigger: GAGGACACACCACTGGCAGCCTGGTACTCGGAGGCACGGCACAGATGGGAGCCCTACCAGTTGCCCGTACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CAA 90 bp | GGCCAGCTGGGGGCAGGAGAAGTCTACTGGCAGGCTATACTCTCTTaGGTCCTTGGGTGCACCCACAGTGTGCCAGTAGATCAGGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: GQLGAGEVYWQAILS*VLGCTHSVPVDQDG Trigger: TCCATCCTGATCTACTGGCACACTGTGGGTGCACCCAAGGACCAAAGAGAGTATAGCCTGCCAGTAGACTTCTCCTGCCCCCAGCTGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 ENSMUST00000229687.2 |
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| CDS CAA 90 bp | GGGCAGGGCAGTGACCCCACGGCAAGCATGGCTCTTTTCCAGGCTTaGGATGGAACACCACTTCTTGAAGACTCGGGTAAGCAGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: GQGSDPTASMALFQA*DGTPLLEDSGKQLG Trigger: CCCCAACTGCTTACCCGAGTCTTCAAGAAGTGGTGTTCCATCCAAAGCCTGGAAAAGAGCCATGCTTGCCGTGGGGTCACTGCCCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS TCA 72 bp | ACTCATGCTTGCGCTCGAAGGCTAGGAAGGCACCGTTaGGGACATAGCGGGATTGGATGCCCAGCGTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: THACARRLGRHR*GHSGIGCPACW Trigger: CCAACACGCTGGGCATCCAATCCCGCTATGTCCTCAACGGTGCCTTCCTAGCCTTCGAGCGCAAGCATGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CCA 72 bp | GTGTCCCTAGGCAGCCCTTTCATCAGCACAACCACCTaGGATTCAGGGTGTGCCCTGGCAGCTGATTCCACA | + |
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Preference number: 6 (lower is better) Translates to: VSLGSPFISTTT*DSGCALAADST Trigger: TGTGGAATCAGCTGCCAGGGCACACCCTGAATCCCAGGTGGTTGTGCTGATGAAAGGGCTGCCTAGGGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CCA 72 bp | CCATCTGTGCCGTGCCTCCGAGTACCAGGCTGCCAGTaGTGTGTCCTCAAACAGTTCTTGCAAGTCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: PSVPCLRVPGCQ*CVLKQFLQVQR Trigger: CCTCTGGACTTGCAAGAACTGTTTGAGGACACACCACTGGCAGCCTGGTACTCGGAGGCACGGCACAGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CCA 72 bp | TCTAGGAAAGGCCAGCTGGGGGCAGGAGAAGTCTACTaGCAGGCTATACTCTCTTTGGTCCTTGGGTGCACC | + |
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Preference number: 6 (lower is better) Translates to: SRKGQLGAGEVY*QAILSLVLGCT Trigger: GGTGCACCCAAGGACCAAAGAGAGTATAGCCTGCCAGTAGACTTCTCCTGCCCCCAGCTGGCCTTTCCTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 ENSMUST00000229687.2 |
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| CDS CCA 72 bp | ATGTTGCCTGGGGCAGAGACTCTAGGAAAGGCCAGCTaGGGGCAGGAGAAGTCTACTGGCAGGCTATACTCT | + |
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Preference number: 6 (lower is better) Translates to: MLPGAETLGKAS*GQEKSTGRLYS Trigger: AGAGTATAGCCTGCCAGTAGACTTCTCCTGCCCCCAGCTGGCCTTTCCTAGAGTCTCTGCCCCAGGCAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CCA 72 bp | GGCAATAGCGGGCATGTAGCTGGGCCAGCAGAGCCTTaGATGTGGCCTCTAGGTGTGTACCCTGACTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GNSGHVAGPAEP*MWPLGVYPDFS Trigger: AGAAAAGTCAGGGTACACACCTAGAGGCCACATCCAAGGCTCTGCTGGCCCAGCTACATGCCCGCTATTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS GCA 72 bp | GCCACGAAGTCATGTAGACACAGTGCCAAGAACTCATaGTTGCGCTCGAAGGCTAGGAAGGCACCGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: ATKSCRHSAKNS*LRSKARKAPLR Trigger: CCTCAACGGTGCCTTCCTAGCCTTCGAGCGCAAGCATGAGTTCTTGGCACTGTGTCTACATGACTTCGTGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CCA 72 bp | GGTAGATCCCACCAAACTTCCAGAGGAGTGCGATCCTaGAAGCATCAGACAGTACGGGCAACTGGTAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GRSHQTSRGVRS*KHQTVRATGRA Trigger: AGCCCTACCAGTTGCCCGTACTGTCTGATGCTTCCAGGATCGCACTCCTCTGGAAGTTTGGTGGGATCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CAA 72 bp | GGGGCAGGAGAAGTCTACTGGCAGGCTATACTCTCTTaGGTCCTTGGGTGCACCCACAGTGTGCCAGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: GAGEVYWQAILS*VLGCTHSVPVD Trigger: ATCTACTGGCACACTGTGGGTGCACCCAAGGACCAAAGAGAGTATAGCCTGCCAGTAGACTTCTCCTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 ENSMUST00000229687.2 |
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| CDS GCA 72 bp | TGTGTCCAGGTAGATCCCACCAAACTTCCAGAGGAGTaGGATCCTGGAAGCATCAGACAGTACGGGCAACTG | + |
|
Preference number: 6 (lower is better) Translates to: CVQVDPTKLPEE*DPGSIRQYGQL Trigger: CAGTTGCCCGTACTGTCTGATGCTTCCAGGATCGCACTCCTCTGGAAGTTTGGTGGGATCTACCTGGACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CCA 72 bp | GGGGGCCCTGGTGACCCCAAATCCAACCATTGTAGTTaGCCACGAAGTCATGTAGACACAGTGCCAAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: GGPGDPKSNHCS*PRSHVDTVPRT Trigger: AGTTCTTGGCACTGTGTCTACATGACTTCGTGGCCAACTACAATGGTTGGATTTGGGGTCACCAGGGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CCA 72 bp | GTGACCCCACGGCAAGCATGGCTCTTTTCCAGGCTTTaGATGGAACACCACTTCTTGAAGACTCGGGTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: VTPRQAWLFSRL*MEHHFLKTRVS Trigger: GCTTACCCGAGTCTTCAAGAAGTGGTGTTCCATCCAAAGCCTGGAAAAGAGCCATGCTTGCCGTGGGGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CCA 72 bp | AGAAGTCTACTGGCAGGCTATACTCTCTTTGGTCCTTaGGTGCACCCACAGTGTGCCAGTAGATCAGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: RSLLAGYTLFGP*VHPQCASRSGW Trigger: CCATCCTGATCTACTGGCACACTGTGGGTGCACCCAAGGACCAAAGAGAGTATAGCCTGCCAGTAGACTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 ENSMUST00000229687.2 |
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| CDS CAA 72 bp | ACGAAGTCATGTAGACACAGTGCCAAGAACTCATGCTaGCGCTCGAAGGCTAGGAAGGCACCGTTGAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: TKSCRHSAKNSC*RSKARKAPLRT Trigger: TGTCCTCAACGGTGCCTTCCTAGCCTTCGAGCGCAAGCATGAGTTCTTGGCACTGTGTCTACATGACTTCGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CAA 72 bp | GATGGAACACCACTTCTTGAAGACTCGGGTAAGCAGTaGGGGGCCCTGGTGACCCCAAATCCAACCATTGTA | + |
|
Preference number: 6 (lower is better) Translates to: DGTPLLEDSGKQ*GALVTPNPTIV Trigger: TACAATGGTTGGATTTGGGGTCACCAGGGCCCCCAACTGCTTACCCGAGTCTTCAAGAAGTGGTGTTCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CAA 72 bp | AGTGACCCCACGGCAAGCATGGCTCTTTTCCAGGCTTaGGATGGAACACCACTTCTTGAAGACTCGGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SDPTASMALFQA*DGTPLLEDSGK Trigger: CTTACCCGAGTCTTCAAGAAGTGGTGTTCCATCCAAAGCCTGGAAAAGAGCCATGCTTGCCGTGGGGTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CAA 90 bp | GGGTGTGCCCTGGCAGCTGATTCCACAGAACACATAAATAGAAAGTaGGGACTGGTCCTGTCCGATGTCTCTAGGAAGAAGATGTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GCALAADSTEHINRK*GLVLSDVSRKKMLP Trigger: AGGCAACATCTTCTTCCTAGAGACATCGGACAGGACCAGTCCCAACTTTCTATTTATGTGTTCTGTGGAATCAGCTGCCAGGGCACACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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| CDS CAA 72 bp | CTGGCAGCTGATTCCACAGAACACATAAATAGAAAGTaGGGACTGGTCCTGTCCGATGTCTCTAGGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LAADSTEHINRK*GLVLSDVSRKK Trigger: CTTCTTCCTAGAGACATCGGACAGGACCAGTCCCAACTTTCTATTTATGTGTTCTGTGGAATCAGCTGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049530.14 ENSMUST00000164614.3 |
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