Pregenerated sensors for A3GALT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028794Ensembl transcript IDs: ENSMUST00000030585.8, ENSMUST00000106077.8
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCAGCATGCAGGGGTTTCGGAGGGGAGAAGGGCTGACACTCTCCTaGTGCTCTCCTGACACCGCGCTGTTAGGTCCCATGAGAGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: ASMQGFRRGEGLTLS*CSPDTALLGPMRGF Trigger: GAAGCCTCTCATGGGACCTAACAGCGCGGTGTCAGGAGAGCAGCAGGAGAGTGTCAGCCCTTCTCCCCTCCGAAACCCCTGCATGCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR GCA 90 bp | TGCCCATGGGGCAGGGAGCCAGCCATGCTCCAGACAGGAGAAGCCTaGTTGACGGTGGAAGAAGAGGCAGTCAAACAAATAAACGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: CPWGREPAMLQTGEA*LTVEEEAVKQINAG Trigger: GCCTGCGTTTATTTGTTTGACTGCCTCTTCTTCCACCGTCAAGCAGGCTTCTCCTGTCTGGAGCATGGCTGGCTCCCTGCCCCATGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR GCA 90 bp | AGGCTCGGTCGGTTCAAACATCTCACTTATGGCTACTACACTGGATaGTCAGCTGCCCTTATGAGCCAGCATGCAGGGGTTTCGGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: RLGRFKHLTYGYYTG*SAALMSQHAGVSEG Trigger: CCCCTCCGAAACCCCTGCATGCTGGCTCATAAGGGCAGCTGAGCATCCAGTGTAGTAGCCATAAGTGAGATGTTTGAACCGACCGAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR CCA 90 bp | GATGAGGCTCGGTCGGTTCAAACATCTCACTTATGGCTACTACACTaGATGCTCAGCTGCCCTTATGAGCCAGCATGCAGGGGTTTCGGA | + |
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Preference number: 1 (lower is better) Translates to: DEARSVQTSHLWLLH*MLSCPYEPACRGFG Trigger: TCCGAAACCCCTGCATGCTGGCTCATAAGGGCAGCTGAGCATCCAGTGTAGTAGCCATAAGTGAGATGTTTGAACCGACCGAGCCTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR TCA 90 bp | AGAAGAGGTCTAGCAGAAGGGCTACCTGGGAGCATCCCAGAGAGATaGGGCTCGGTCGGTTCAAACATCTCACTTATGGCTACTACACTG | + |
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Preference number: 1 (lower is better) Translates to: RRGLAEGLPGSIPER*GSVGSNISLMATTL Trigger: CAGTGTAGTAGCCATAAGTGAGATGTTTGAACCGACCGAGCCTCATCTCTCTGGGATGCTCCCAGGTAGCCCTTCTGCTAGACCTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR TCA 90 bp | AGGGTCTCATCCCTTCCTGGGGCCCTGGGTGGTGTTAAGCAGTGTTaGAAATCTCTCACAATTAGAACACGTGTTAACAATAAGTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: RVSSLPGALGGVKQC*KSLTIRTRVNNKSF Trigger: GAAGGACTTATTGTTAACACGTGTTCTAATTGTGAGAGATTTTCAACACTGCTTAACACCACCCAGGGCCCCAGGAAGGGATGAGACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGGTGGTGGCAGAGGCAATGACAACCGCGTGACCTGCCGGCCACACAACAACAAGGGGAAGTGCCCATaGGGCAGGGAGCCAGCCATG | + |
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Preference number: 2 (lower is better) Translates to: SGGGRGNDNRVTCRPHNNKGKCP*GREPAM Trigger: CATGGCTGGCTCCCTGCCCCATGGGCACTTCCCCTT...GTTGTTGTGTGGCCGGCAGGTCACGCGGTTGTCATTGCCTCTGCCACCACCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR CCA 90 bp | CTACTACACTGGATGCTCAGCTGCCCTTATGAGCCAGCATGCAGGGGTTTCGGAAAGGGGAAGTGCCCATaGGGCAGGGAGCCAGCCATG | + |
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Preference number: 2 (lower is better) Translates to: LLHWMLSCPYEPACRGFGKGKCP*GREPAM Trigger: CATGGCTGGCTCCCTGCCCCATGGGCACTTCCCCTT...TCCGAAACCCCTGCATGCTGGCTCATAAGGGCAGCTGAGCATCCAGTGTAGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR CAA 90 bp | CCATGGGGCAGGGAGCCAGCCATGCTCCAGACAGGAGAAGCCTGCTaGACGGTGGAAGAAGAGGCAGTCAAACAAATAAACGCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PWGREPAMLQTGEAC*TVEEEAVKQINAGR Trigger: CCTGCCTGCGTTTATTTGTTTGACTGCCTCTTCTTCCACCGTCAAGCAGGCTTCTCCTGTCTGGAGCATGGCTGGCTCCCTGCCCCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR CAA 90 bp | ACTCCCATGCCAGCAGGTGTTGGACTACCCCCATGCTGGCACCCCTaGTCTTGCACAGCCCATGGACACCTTGAGAGTCCCACACAACAA | + |
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Preference number: 2 (lower is better) Translates to: TPMPAGVGLPPCWHP*SCTAHGHLESPTQQ Trigger: TTGTTGTGTGGGACTCTCAAGGTGTCCATGGGCTGTGCAAGACAAGGGGTGCCAGCATGGGGGTAGTCCAACACCTGCTGGCATGGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR-3UTR TCA 90 bp | CTACTACACTGGATGCTCAGCTGCCCTTATGAGCCAGCATGCAGGGGTTTCGGAGGTCCACTCAGAAGCTaGGACACTAGCCACTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: LLHWMLSCPYEPACRGFGGPLRS*DTSHCQ Trigger: TTGGCAGTGGCTAGTGTCTCAGCTTCTGAGTGGACC...TCCGAAACCCCTGCATGCTGGCTCATAAGGGCAGCTGAGCATCCAGTGTAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGGTGGTGGCAGAGGCAATGACAACCGCGTGACCTGCCGGCCACACAACAACAGAAACTGCAGATCCTaGTCACAGGAATGGCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: SGGGRGNDNRVTCRPHNNRNCRS*SQEWLQ Trigger: CTGAAGCCATTCCTGTGACCAGGATCTGCAGTTTCT...GTTGTTGTGTGGCCGGCAGGTCACGCGGTTGTCATTGCCTCTGCCACCACCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGGAAGATCTAACTCTCATTCTTCCGCTGCTGATGATCACAAGGGCTCGATGGTGGCAGAGGCAATaGCAACCGCGTGACCTGCCG | + |
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Preference number: 2 (lower is better) Translates to: WKEDLTLILPLLMITRARWWQRQ*QPRDLP Trigger: CGGCAGGTCACGCGGTTGTCATTGCCTCTGCCACCA...TCGAGCCCTTGTGATCATCAGCAGCGGAAGAATGAGAGTTAGATCTTCCTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAAGGAAGATCTAACTCTCATTCTTCCGCTGCTGATGATCACAAGGGCTCGAGGGCTGACACTCTCCTaGTGCTCTCCTGACACCGCG | + |
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Preference number: 2 (lower is better) Translates to: WKEDLTLILPLLMITRARGLTLS*CSPDTA Trigger: CGCGGTGTCAGGAGAGCAGCAGGAGAGTGTCAGCCC...TCGAGCCCTTGTGATCATCAGCAGCGGAAGAATGAGAGTTAGATCTTCCTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR-3UTR TCA 90 bp | CTACTACACTGGATGCTCAGCTGCCCTTATGAGCCAGCATGCAGGGGTTTCGGAGTGAGGACCAAGAGATaGGAAACTGCAGATCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LLHWMLSCPYEPACRGFGVRTKR*ETADPG Trigger: ACCAGGATCTGCAGTTTCTCATCTCTTGGTCCTCAC...TCCGAAACCCCTGCATGCTGGCTCATAAGGGCAGCTGAGCATCCAGTGTAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAAGGAAGATCTAACTCTCATTCTTCCGCTGCTGATGATCACAAGGGCTCGACTGACACTCTCCTGCTaGTCTCCTGACACCGCGCTG | + |
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Preference number: 2 (lower is better) Translates to: WKEDLTLILPLLMITRARLTLSC*SPDTAL Trigger: CAGCGCGGTGTCAGGAGAGCAGCAGGAGAGTGTCAG...TCGAGCCCTTGTGATCATCAGCAGCGGAAGAATGAGAGTTAGATCTTCCTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR-3UTR CCA 90 bp | AATAAACGCAGGCAGGGACCTGCATACGAACAAGAGGGCCAGCAGAGGCAGACACTGCTGACAAGCACCTaGGATACAAAAGCTGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: NKRRQGPAYEQEGQQRQTLLTST*DTKAAR Trigger: TCTGGCAGCTTTTGTATCCCAGGTGCTTGTCAGCAG...TGTCTGCCTCTGCTGGCCCTCTTGTTCGTATGCAGGTCCCTGCCTGCGTTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR TCA 90 bp | CTACTACACTGGATGCTCAGCTGCCCTTATGAGCCAGCATGCAGGGGTTTCGGACGCTATAAGTGGCTCTaGCTTAAGGTAGTGCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LLHWMLSCPYEPACRGFGRYKWL*LKVVPK Trigger: CTTTGGCACTACCTTAAGTCAGAGCCACTTATAGCG...TCCGAAACCCCTGCATGCTGGCTCATAAGGGCAGCTGAGCATCCAGTGTAGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR GCA 90 bp | CTGACACTCTCCTGCTGCTCTCCTGACACCGCGCTGTTAGGTCCCATGAGAGGCAGCTGCCAGAATTCTTaGCTTTCCATAATTTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LTLSCCSPDTALLGPMRGSCQNS*LSIICF Trigger: GAAGCAAATTATGGAAAGGCAAGAATTCTGGCAGCT...GCCTCTCATGGGACCTAACAGCGCGGTGTCAGGAGAGCAGCAGGAGAGTGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCCTAAAGGGAGTTGGGCTGGAAGGAAGATCTAACTCTCATTCTTCCGCTCACTGGATGCTCAGCTaGCCTTATGAGCCAGCATGC | + |
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Preference number: 2 (lower is better) Translates to: SLLKGVGLEGRSNSHSSAHWMLS*PYEPAC Trigger: GCATGCTGGCTCATAAGGGCAGCTGAGCATCCAGTG...AGCGGAAGAATGAGAGTTAGATCTTCCTTCCAGCCCAACTCCCTTTAGGAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGCCTTGTCCCCAAGGCCTCTGCAAAAGCTTTAATCCTGGTAGGTGGTACCTGCTGACAAGCACCTaGGATACAAAAGCTGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: GRPCPQGLCKSFNPGRWYLLTST*DTKAAR Trigger: TCTGGCAGCTTTTGTATCCCAGGTGCTTGTCAGCAG...GTACCACCTACCAGGATTAAAGCTTTTGCAGAGGCCTTGGGGACAAGGCCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATAAACGCAGGCAGGGACCTGCATACGAACAAGAGGGCCAGCAGAGGCAGAAGAAACTGCAGATCCTaGTCACAGGAATGGCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: QINAGRDLHTNKRASRGRRNCRS*SQEWLQ Trigger: CTGAAGCCATTCCTGTGACCAGGATCTGCAGTTTCT...TCTGCCTCTGCTGGCCCTCTTGTTCGTATGCAGGTCCCTGCCTGCGTTTATTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR GCA 90 bp | AATAAACGCAGGCAGGGACCTGCATACGAACAAGAGGGCCAGCAGAGGCAGACACTGGGATACAAAAGCTaGCAGAATTCTTGCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: NKRRQGPAYEQEGQQRQTLGYKS*QNSCLS Trigger: GGAAAGGCAAGAATTCTGGCAGCTTTTGTATCCCAG...TGTCTGCCTCTGCTGGCCCTCTTGTTCGTATGCAGGTCCCTGCCTGCGTTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR CCA 90 bp | CCACTGCCAAGGGCTAAGGAAGGCCTTGTCCCCAAGGCCTCTGCAAAAGCTTTATCCATAATTTGCTTCTaGTTGGAGCAAAAAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: PLPRAKEGLVPKASAKALSIICF*LEQKGS Trigger: AGAGCCTTTTTGCTCCAACCAGAAGCAAATTATGGA...TAAAGCTTTTGCAGAGGCCTTGGGGACAAGGCCTTCCTTAGCCCTTGGCAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATAAACGCAGGCAGGGACCTGCATACGAACAAGAGGGCCAGCAGAGGCAGATCCATAATTTGCTTCTaGTTGGAGCAAAAAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: QINAGRDLHTNKRASRGRSIICF*LEQKGS Trigger: AGAGCCTTTTTGCTCCAACCAGAAGCAAATTATGGA...TCTGCCTCTGCTGGCCCTCTTGTTCGTATGCAGGTCCCTGCCTGCGTTTATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGGAAGATCTAACTCTCATTCTTCCGCTGCTGATGATCACAAGGGCTCGAGTCATTGTCAAGGTGTaGGAACCCCAATACCTAGGT | + |
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Preference number: 2 (lower is better) Translates to: WKEDLTLILPLLMITRARVIVKV*EPQYLG Trigger: ACCTAGGTATTGGGGTTCCCACACCTTGACAATGAC...TCGAGCCCTTGTGATCATCAGCAGCGGAAGAATGAGAGTTAGATCTTCCTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR CAA 90 bp | GCACCTGGGATACAAAAGCTGCCAGAATTCTTGCCTTTCCATAATTaGCTTCTGGTTGGAGCAAAAAGGCTCTCCTGTCAGCTGACAAAG | + |
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Preference number: 2 (lower is better) Translates to: APGIQKLPEFLPFHN*LLVGAKRLSCQLTK Trigger: CTTTGTCAGCTGACAGGAGAGCCTTTTTGCTCCAACCAGAAGCAAATTATGGAAAGGCAAGAATTCTGGCAGCTTTTGTATCCCAGGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTTAAAAATATCACGTCAAAAGAAGCACTCAGTAAGGTCAGAGGTGAAAGGGGGTCCACTCAGAAGCTaGGACACTAGCCACTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: MLKISRQKKHSVRSEVKGGPLRS*DTSHCQ Trigger: TTGGCAGTGGCTAGTGTCTCAGCTTCTGAGTGGACC...CCCTTTCACCTCTGACCTTACTGAGTGCTTCTTTTGACGTGATATTTTTAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR-3UTR TCA 90 bp | GATAATAGAGCAGAGATAATATATGACTGGAACGTCTGCTTGCCTTTCTCAGTGCGCTATAAGTGGCTCTaGCTTAAGGTAGTGCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: DNRAEIIYDWNVCLPFSVRYKWL*LKVVPK Trigger: CTTTGGCACTACCTTAAGTCAGAGCCACTTATAGCG...CACTGAGAAAGGCAAGCAGACGTTCCAGTCATATATTATCTCTGCTCTATTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR-3UTR GCA 90 bp | GATAATAGAGCAGAGATAATATATGACTGGAACGTCTGCTTGCCTTTCTCAGTGTGCCTTTCCATAATTTaGTTCTGGTTGGAGCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: DNRAEIIYDWNVCLPFSVCLSII*FWLEQK Trigger: TTTTTGCTCCAACCAGAAGCAAATTATGGAAAGGCA...CACTGAGAAAGGCAAGCAGACGTTCCAGTCATATATTATCTCTGCTCTATTATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTTAAAAATATCACGTCAAAAGAAGCACTCAGTAAGGTCAGAGGTGAAAGGGAGCTGCCAGAATTCTTaGCTTTCCATAATTTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: MLKISRQKKHSVRSEVKGSCQNS*LSIICF Trigger: GAAGCAAATTATGGAAAGGCAAGAATTCTGGCAGCT...CCCTTTCACCTCTGACCTTACTGAGTGCTTCTTTTGACGTGATATTTTTAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR TCA 72 bp | GAGCCAGCATGCAGGGGTTTCGGAGGGGAGAAGGGCTaGCACTCTCCTGCTGCTCTCCTGACACCGCGCTGT | + |
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Preference number: 3 (lower is better) Translates to: EPACRGFGGEKG*HSPAALLTPRC Trigger: ACAGCGCGGTGTCAGGAGAGCAGCAGGAGAGTGTCAGCCCTTCTCCCCTCCGAAACCCCTGCATGCTGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR TCA 72 bp | GAGGGGAGAAGGGCTGACACTCTCCTGCTGCTCTCCTaGCACCGCGCTGTTAGGTCCCATGAGAGGCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: EGRRADTLLLLS*HRAVRSHERLP Trigger: GGGAAGCCTCTCATGGGACCTAACAGCGCGGTGTCAGGAGAGCAGCAGGAGAGTGTCAGCCCTTCTCCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR GCA 72 bp | CAGGGGTTTCGGAGGGGAGAAGGGCTGACACTCTCCTaGTGCTCTCCTGACACCGCGCTGTTAGGTCCCATG | + |
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Preference number: 3 (lower is better) Translates to: QGFRRGEGLTLS*CSPDTALLGPM Trigger: CATGGGACCTAACAGCGCGGTGTCAGGAGAGCAGCAGGAGAGTGTCAGCCCTTCTCCCCTCCGAAACCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR GCA 72 bp | AGTGGTGGTGGCAGAGGCAATGACAACCGCGTGACCTaGCGGCCACACAACAACGGCAAGGGAATTGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: SGGGRGNDNRVT*RPHNNGKGIEG Trigger: CCCTTCAATTCCCTTGCCGTTGTTGTGTGGCCGGCAGGTCACGCGGTTGTCATTGCCTCTGCCACCACCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR CAA 90 bp | CTGACACTCTCCTGCTGCTCTCCTGACACCGCGCTGTTAGGTCCCATGAGAGGCACAACGGCAAGGGAATaGAAGGGGAAGTGCCCATGG | + |
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Preference number: 3 (lower is better) Translates to: LTLSCCSPDTALLGPMRGTTARE*KGKCPW Trigger: CCATGGGCACTTCCCCTTCAATTCCCTTGCCGTTGT...GCCTCTCATGGGACCTAACAGCGCGGTGTCAGGAGAGCAGCAGGAGAGTGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR CAA 90 bp | CTACTACACTGGATGCTCAGCTGCCCTTATGAGCCAGCATGCAGGGGTTTCGGAGGGCTAAGGAAGGCCTaGTCCCCAAGGCCTCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: LLHWMLSCPYEPACRGFGGLRKA*SPRPLQ Trigger: TTGCAGAGGCCTTGGGGACAAGGCCTTCCTTAGCCC...TCCGAAACCCCTGCATGCTGGCTCATAAGGGCAGCTGAGCATCCAGTGTAGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR TCA 72 bp | ATAGCAGTGGTGGTGGCAGAGGCAATGACAACCGCGTaGCCTGCCGGCCACACAACAACGGCAAGGGAATTG | + |
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Preference number: 3 (lower is better) Translates to: IAVVVAEAMTTA*PAGHTTTAREL Trigger: CAATTCCCTTGCCGTTGTTGTGTGGCCGGCAGGTCACGCGGTTGTCATTGCCTCTGCCACCACCACTGCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR GCA 72 bp | GGTGTTGGACTACCCCCATGCTGGCACCCCTTGTCTTaGACAGCCCATGGACACCTTGAGAGTCCCACACAA | + |
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Preference number: 3 (lower is better) Translates to: GVGLPPCWHPLS*TAHGHLESPTQ Trigger: TTGTGTGGGACTCTCAAGGTGTCCATGGGCTGTGCAAGACAAGGGGTGCCAGCATGGGGGTAGTCCAACACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR TCA 72 bp | CTTATGGCTACTACACTGGATGCTCAGCTGCCCTTATaGGCCAGCATGCAGGGGTTTCGGAGGGGAGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: LMATTLDAQLPL*ASMQGFRRGEG Trigger: CCCTTCTCCCCTCCGAAACCCCTGCATGCTGGCTCATAAGGGCAGCTGAGCATCCAGTGTAGTAGCCATAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR TCA 72 bp | CAAAGTCCCCCTTCCCAGAGGCGCTATAAGTGGCTCTaGCTTAAGGTAGTGCCAAAGATGTTGGCGCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: QSPPSQRRYKWL*LKVVPKMLAPA Trigger: AGCAGGCGCCAACATCTTTGGCACTACCTTAAGTCAGAGCCACTTATAGCGCCTCTGGGAAGGGGGACTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR TCA 72 bp | GGAGAGCTGAGGCTGAAGTCGGTGAGGACCAAGAGATaGGAAACTGCAGATCCTGGTCACAGGAATGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: GELRLKSVRTKR*ETADPGHRNGF Trigger: GAAGCCATTCCTGTGACCAGGATCTGCAGTTTCTCATCTCTTGGTCCTCACCGACTTCAGCCTCAGCTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR GCA 72 bp | ACATCTCACTTATGGCTACTACACTGGATGCTCAGCTaGCCTTATGAGCCAGCATGCAGGGGTTTCGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: TSHLWLLHWMLS*PYEPACRGFGG Trigger: CCCTCCGAAACCCCTGCATGCTGGCTCATAAGGGCAGCTGAGCATCCAGTGTAGTAGCCATAAGTGAGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR-3UTR CAA 90 bp | CTGACACTCTCCTGCTGCTCTCCTGACACCGCGCTGTTAGGTCCCATGAGAGGCATAATTTGCTTCTGGTaGGAGCAAAAAGGCTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: LTLSCCSPDTALLGPMRGIICFW*EQKGSP Trigger: AGGAGAGCCTTTTTGCTCCAACCAGAAGCAAATTAT...GCCTCTCATGGGACCTAACAGCGCGGTGTCAGGAGAGCAGCAGGAGAGTGTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR CCA 72 bp | CGGTCGGTTCAAACATCTCACTTATGGCTACTACACTaGATGCTCAGCTGCCCTTATGAGCCAGCATGCAGG | + |
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Preference number: 3 (lower is better) Translates to: RSVQTSHLWLLH*MLSCPYEPACR Trigger: CCTGCATGCTGGCTCATAAGGGCAGCTGAGCATCCAGTGTAGTAGCCATAAGTGAGATGTTTGAACCGACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAGGCAGACAGGACGGAGAGCTGAGGCTGAAGTCGGTGAGGACCAAGAGATGAAGCTGCCAGAATTCTaGCCTTTCCATAATTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: QRQTGRRAEAEVGEDQEMKLPEF*PFHNLL Trigger: AAGCAAATTATGGAAAGGCAAGAATTCTGGCAGCTT...CATCTCTTGGTCCTCACCGACTTCAGCCTCAGCTCTCCGTCCTGTCTGCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTCCTAAAGGGAGTTGGGCTGGAAGGAAGATCTAACTCTCATTCTTCCGCTCAGCCCATGGACACCTaGAGAGTCCCACACAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: SLLKGVGLEGRSNSHSSAQPMDT*RVPHNN Trigger: ATTGTTGTGTGGGACTCTCAAGGTGTCCATGGGCTG...AGCGGAAGAATGAGAGTTAGATCTTCCTTCCAGCCCAACTCCCTTTAGGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAGGAAGATCTAACTCTCATTCTTCCGCTGCTGATGATCACAAGGGCTCGAGTAAGCACTGTCAACTaGACTCCCATGCCAGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: WKEDLTLILPLLMITRARVSTVN*TPMPAG Trigger: ACCTGCTGGCATGGGAGTCAAGTTGACAGTGCTTAC...TCGAGCCCTTGTGATCATCAGCAGCGGAAGAATGAGAGTTAGATCTTCCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| 3UTR CCA 72 bp | GCCACGGGAGATAATAGAGCAGAGATAATATATGACTaGAACGTCTGCTTGCCTTTCTCAGTGGCTCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ATGDNRAEIIYD*NVCLPFSVAPS Trigger: GGAGGGAGCCACTGAGAAAGGCAAGCAGACGTTCCAGTCATATATTATCTCTGCTCTATTATCTCCCGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| 3UTR CCA 72 bp | CAAGAGATGAGAAACTGCAGATCCTGGTCACAGGAATaGCTTCAGACAGTTGTCAAGCCTCAGATACTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QEMRNCRSWSQE*LQTVVKPQILK Trigger: CTTTAGTATCTGAGGCTTGACAACTGTCTGAAGCCATTCCTGTGACCAGGATCTGCAGTTTCTCATCTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| 3UTR TCA 72 bp | AGCTCCTTAAGGCACAGCCATAAAACCATGGTTATTTaGAACAGACCTTCTGCTGCCAAAGCCTTTGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SSLRHSHKTMVI*NRPSAAKAFEN Trigger: GTTCTCAAAGGCTTTGGCAGCAGAAGGTCTGTTTCAAATAACCATGGTTTTATGGCTGTGCCTTAAGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| 3UTR GCA 72 bp | GACAAGCACCTGGGATACAAAAGCTGCCAGAATTCTTaGCTTTCCATAATTTGCTTCTGGTTGGAGCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: DKHLGYKSCQNS*LSIICFWLEQK Trigger: TTTTTGCTCCAACCAGAAGCAAATTATGGAAAGGCAAGAATTCTGGCAGCTTTTGTATCCCAGGTGCTTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR GCA 90 bp | AACGCAGGCAGGGACCTGCATACGAACAAGAGGGCCAGCAGAGGCAGACAGGACCGTATATTCCTTGGGTaGCCAGAGCAGGCGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NAGRDLHTNKRASRGRQDRIFLG*PEQAWV Trigger: CACCCACGCCTGCTCTGGGCACCCAAGGAATATACG...GTCCTGTCTGCCTCTGCTGGCCCTCTTGTTCGTATGCAGGTCCCTGCCTGCGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CCA 90 bp | AATAAACGCAGGCAGGGACCTGCATACGAACAAGAGGGCCAGCAGAGGCAGACATGGGCATGCGTGCCATaGACACGTCCTGCCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKRRQGPAYEQEGQQRQTWACVP*TRPASA Trigger: GGCGCTGGCAGGACGTGTCCATGGCACGCATGCCCA...TGTCTGCCTCTGCTGGCCCTCTTGTTCGTATGCAGGTCCCTGCCTGCGTTTATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CCA 90 bp | AACGCAGGCAGGGACCTGCATACGAACAAGAGGGCCAGCAGAGGCAGACAGGACTGCCCAGAGCAGGCGTaGGTGATGGATCTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NAGRDLHTNKRASRGRQDCPEQA*VMDLSP Trigger: AGGAGAGAGATCCATCACCCACGCCTGCTCTGGGCA...GTCCTGTCTGCCTCTGCTGGCCCTCTTGTTCGTATGCAGGTCCCTGCCTGCGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR TCA 90 bp | AACGCAGGCAGGGACCTGCATACGAACAAGAGGGCCAGCAGAGGCAGACAGGACGGTGCAGTACTCCTGTaGAATTGTCCCTCGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NAGRDLHTNKRASRGRQDGAVLL*NCPSAE Trigger: CTCTGCCGAGGGACAATTTCACAGGAGTACTGCACC...GTCCTGTCTGCCTCTGCTGGCCCTCTTGTTCGTATGCAGGTCCCTGCCTGCGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CCA 90 bp | CAAATAAACGCAGGCAGGGACCTGCATACGAACAAGAGGGCCAGCAGAGGCAGACCAGGTTGGCTTCCCTaGGCCTCTTTGTCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QINAGRDLHTNKRASRGRPGWLP*ASLSLS Trigger: GGACAGAGACAAAGAGGCCCAGGGAAGCCAACCTGG...TCTGCCTCTGCTGGCCCTCTTGTTCGTATGCAGGTCCCTGCCTGCGTTTATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| 3UTR CAA 72 bp | CTGGAGCGCACTGTCCTGGAAGTAAGCACTGTCAACTaGACTCCCATGCCAGCAGGTGTTGGACTACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LERTVLEVSTVN*TPMPAGVGLPP Trigger: TGGGGGTAGTCCAACACCTGCTGGCATGGGAGTCAAGTTGACAGTGCTTACTTCCAGGACAGTGCGCTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGTGGTGGCAGAGGCAATGACAACCGCGTGACCTGCCGGCCACACAACAACACTTCTCCAGGTACCTaGCTACAGCAAACACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGGGRGNDNRVTCRPHNNTSPGT*LQQTQS Trigger: TGACTGTGTTTGCTGTAGGCAGGTACCTGGAGAAGT...GTTGTTGTGTGGCCGGCAGGTCACGCGGTTGTCATTGCCTCTGCCACCACCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTGCTGCTCTCCTGACACCGCGCTGTTAGGTCCCATGAGAGGCTTCCCTGCCATCCCAAATAATTaGTGCTCCCCAAGAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LSCCSPDTALLGPMRGFPAIPNN*CSPRGT Trigger: TGTACCTCTTGGGGAGCACCAATTATTTGGGATGGC...AGGGAAGCCTCTCATGGGACCTAACAGCGCGGTGTCAGGAGAGCAGCAGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CCA 90 bp | CTACTACACTGGATGCTCAGCTGCCCTTATGAGCCAGCATGCAGGGGTTTCGGATCAATGCCGCGCTTATaGTCCAGCTGTTGGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLHWMLSCPYEPACRGFGSMPRL*SSCWPV Trigger: GACTGGCCAACAGCTGGACCATAAGCGCGGCATTGA...TCCGAAACCCCTGCATGCTGGCTCATAAGGGCAGCTGAGCATCCAGTGTAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CCA 90 bp | CAAATAAACGCAGGCAGGGACCTGCATACGAACAAGAGGGCCAGCAGAGGCAGAGCGACAGCAGCTTGGTaGGCTTGTTCAGCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QINAGRDLHTNKRASRGRATAAW*ACSARR Trigger: TCTTCTGGCTGAACAAGCCCACCAAGCTGCTGTCGC...TCTGCCTCTGCTGGCCCTCTTGTTCGTATGCAGGTCCCTGCCTGCGTTTATTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTCCTAAAGGGAGTTGGGCTGGAAGGAAGATCTAACTCTCATTCTTCCGCTTCGGCAACTTCCATGTaGCCCTGGCCAGCTCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLKGVGLEGRSNSHSSASATSM*PWPAHS Trigger: GGAGTGAGCTGGCCAGGGTCACATGGAAGTTGCCGA...AGCGGAAGAATGAGAGTTAGATCTTCCTTCCAGCCCAACTCCCTTTAGGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGCCTTGTCCCCAAGGCCTCTGCAAAAGCTTTAATCCTGGTAGGTGGTACCCGACCATGAAGTGCTaGTCTGCCGATACCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRPCPQGLCKSFNPGRWYPTMKC*SADTRK Trigger: CTTCCTGGTATCGGCAGAGCAGCACTTCATGGTCGG...GTACCACCTACCAGGATTAAAGCTTTTGCAGAGGCCTTGGGGACAAGGCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CCA 90 bp | CTACTACACTGGATGCTCAGCTGCCCTTATGAGCCAGCATGCAGGGGTTTCGGATTACCGGTGAAGTACTaGTCCACGTCCAGGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLHWMLSCPYEPACRGFGLPVKY*STSRQN Trigger: GTTCTGCCTGGACGTGGACCAGTACTTCACCGGTAA...TCCGAAACCCCTGCATGCTGGCTCATAAGGGCAGCTGAGCATCCAGTGTAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR GCA 90 bp | CTACTACACTGGATGCTCAGCTGCCCTTATGAGCCAGCATGCAGGGGTTTCGGACCAGATAATTTCCTCTaGCCAGCAGAACTCAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLHWMLSCPYEPACRGFGPDNFL*PAELRR Trigger: TCGCCTGAGTTCTGCTGGGCAGAGGAAATTATCTGG...TCCGAAACCCCTGCATGCTGGCTCATAAGGGCAGCTGAGCATCCAGTGTAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR TCA 90 bp | CTACAGGCCCCAGGTACAGGATCTCTTTTCAATATCTCTGAGTTCCAAAGTCCCTCTCTTCTTGGCCCGTaGAAGTCCCCAGGTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQAPGTGSLFNISEFQSPSLLGP*KSPGWL Trigger: AAGCCAACCTGGGGACTTTCACGGGCCAAGAAGAGA...GGGACTTTGGAACTCAGAGATATTGAAAAGAGATCCTGTACCTGGGGCCTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCAGCTGACAAAGGGTCTACAGGCCCCAGGTACAGGATCTCTTTTCAATATGGTGCAGTACTCCTGTaGAATTGTCCCTCGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSADKGSTGPRYRISFQYGAVLL*NCPSAE Trigger: CTCTGCCGAGGGACAATTTCACAGGAGTACTGCACC...ATATTGAAAAGAGATCCTGTACCTGGGGCCTGTAGACCCTTTGTCAGCTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGTACAGGATCTCTTTTCAATATCTCTGAGTTCCAAAGTCCCCCTTCCCAGCCGACCATGAAGTGCTaGTCTGCCGATACCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGTGSLFNISEFQSPPSQPTMKC*SADTRK Trigger: CTTCCTGGTATCGGCAGAGCAGCACTTCATGGTCGG...CTGGGAAGGGGGACTTTGGAACTCAGAGATATTGAAAAGAGATCCTGTACCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS-3UTR GCA 90 bp | CTCTTTTCAATATCTCTGAGTTCCAAAGTCCCCCTTCCCAGAGGCGCTATAAGTCGTATATTCCTTGGGTaGCCAGAGCAGGCGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFSISLSSKVPLPRGAISRIFLG*PEQAWV Trigger: CACCCACGCCTGCTCTGGGCACCCAAGGAATATACG...ACTTATAGCGCCTCTGGGAAGGGGGACTTTGGAACTCAGAGATATTGAAAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS-3UTR CCA 90 bp | CTACAGGCCCCAGGTACAGGATCTCTTTTCAATATCTCTGAGTTCCAAAGTCCCTCAATGCCGCGCTTATaGTCCAGCTGTTGGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LQAPGTGSLFNISEFQSPSMPRL*SSCWPV Trigger: GACTGGCCAACAGCTGGACCATAAGCGCGGCATTGA...GGGACTTTGGAACTCAGAGATATTGAAAAGAGATCCTGTACCTGGGGCCTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS-3UTR CCA 90 bp | CCAGGTACAGGATCTCTTTTCAATATCTCTGAGTTCCAAAGTCCCCCTTCCCAGGCGACAGCAGCTTGGTaGGCTTGTTCAGCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGTGSLFNISEFQSPPSQATAAW*ACSARR Trigger: TCTTCTGGCTGAACAAGCCCACCAAGCTGCTGTCGC...CTGGGAAGGGGGACTTTGGAACTCAGAGATATTGAAAAGAGATCCTGTACCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS-3UTR CCA 90 bp | CTACAGGCCCCAGGTACAGGATCTCTTTTCAATATCTCTGAGTTCCAAAGTCCCTTACCGGTGAAGTACTaGTCCACGTCCAGGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQAPGTGSLFNISEFQSPLPVKY*STSRQN Trigger: GTTCTGCCTGGACGTGGACCAGTACTTCACCGGTAA...GGGACTTTGGAACTCAGAGATATTGAAAAGAGATCCTGTACCTGGGGCCTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| 3UTR CAA 72 bp | CGAAATGGTCCTGTGTCTGGGCAGTTTGGTCGCTCTTaGTGCCCCAGTCTCCTCATGTTAAAAATATCACGT | + |
|
Preference number: 4 (lower is better) Translates to: RNGPVSGQFGRS*CPSLLMLKISR Trigger: ACGTGATATTTTTAACATGAGGAGACTGGGGCACAAAGAGCGACCAAACTGCCCAGACACAGGACCATTTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| CDS-3UTR CCA 90 bp | GATAATAGAGCAGAGATAATATATGACTGGAACGTCTGCTTGCCTTTCTCAGTGTGCCCAGAGCAGGCGTaGGTGATGGATCTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DNRAEIIYDWNVCLPFSVCPEQA*VMDLSP Trigger: AGGAGAGAGATCCATCACCCACGCCTGCTCTGGGCA...CACTGAGAAAGGCAAGCAGACGTTCCAGTCATATATTATCTCTGCTCTATTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| 3UTR CAA 72 bp | TGGTTATTTGAAACAGACCTTCTGCTGCCAAAGCCTTaGAGAACTCCAGAAGACTCCATACCCATCACCATA | + |
|
Preference number: 4 (lower is better) Translates to: WLFETDLLLPKP*RTPEDSIPITI Trigger: TATGGTGATGGGTATGGAGTCTTCTGGAGTTCTCAAAGGCTTTGGCAGCAGAAGGTCTGTTTCAAATAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| CDS-3UTR GCA 90 bp | GATAATAGAGCAGAGATAATATATGACTGGAACGTCTGCTTGCCTTTCTCAGTGACTTCTCCAGGTACCTaGCTACAGCAAACACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DNRAEIIYDWNVCLPFSVTSPGT*LQQTQS Trigger: TGACTGTGTTTGCTGTAGGCAGGTACCTGGAGAAGT...CACTGAGAAAGGCAAGCAGACGTTCCAGTCATATATTATCTCTGCTCTATTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| 3UTR CAA 72 bp | ATACAAAAGCTGCCAGAATTCTTGCCTTTCCATAATTaGCTTCTGGTTGGAGCAAAAAGGCTCTCCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IQKLPEFLPFHN*LLVGAKRLSCQ Trigger: CTGACAGGAGAGCCTTTTTGCTCCAACCAGAAGCAAATTATGGAAAGGCAAGAATTCTGGCAGCTTTTGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS GCA 90 bp | GTGGGCATGCGTGCCATGGACACGTCCTGCCAGCGCCTCTCTCGCTaGACGGGTTTTGCCCGCAGCAGGCGACCCTGGCCTAGAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VGMRAMDTSCQRLSR*TGFARSRRPWPRAT Trigger: TGTGGCTCTAGGCCAGGGTCGCCTGCTGCGGGCAAAACCCGTGCAGCGAGAGAGGCGCTGGCAGGACGTGTCCATGGCACGCATGCCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS GCA 90 bp | CTTCTTGGCCCAGCTGCCCTCCCAGAGCCTCGTGTAGCGTGGGCATaGGTGCCATGGACACGTCCTGCCAGCGCCTCTCTCGCTGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: LLGPAALPEPRVAWA*VPWTRPASASLAAR Trigger: CCGTGCAGCGAGAGAGGCGCTGGCAGGACGTGTCCATGGCACGCATGCCCACGCTACACGAGGCTCTGGGAGGGCAGCTGGGCCAAGAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS CCA 90 bp | CCAGCTGCCCTCCCAGAGCCTCGTGTAGCGTGGGCATGCGTGCCATaGACACGTCCTGCCAGCGCCTCTCTCGCTGCACGGGTTTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PAALPEPRVAWACVP*TRPASASLAARVLP Trigger: GGGCAAAACCCGTGCAGCGAGAGAGGCGCTGGCAGGACGTGTCCATGGCACGCATGCCCACGCTACACGAGGCTCTGGGAGGGCAGCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS GCA 90 bp | GGGCAGCAGCCACCGCGGCCAGCGGTAGTGCCAGGCGTGCAGCTGTaGCACCAAATCTGCCAGCACCTCAGGCCCGAAGTTACCGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GQQPPRPAVVPGVQL*HQICQHLRPEVTGE Trigger: TTCACCGGTAACTTCGGGCCTGAGGTGCTGGCAGATTTGGTGGCACAGCTGCACGCCTGGCACTACCGCTGGCCGCGGTGGCTGCTGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS GCA 90 bp | CCGCGGCCAGCGGTAGTGCCAGGCGTGCAGCTGTGCCACCAAATCTaGCAGCACCTCAGGCCCGAAGTTACCGGTGAAGTACTGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PRPAVVPGVQLCHQI*QHLRPEVTGEVLVH Trigger: GTGGACCAGTACTTCACCGGTAACTTCGGGCCTGAGGTGCTGGCAGATTTGGTGGCACAGCTGCACGCCTGGCACTACCGCTGGCCGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS CCA 90 bp | TCGTCGTGCCAGAGTGCCTCAATGCCGCGCTTATGGTCCAGCTGTTaGCCAGTCGCACAGTGGGCCGTCAGCTTGAGCAGTGCAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SSCQSASMPRLWSSC*PVAQWAVSLSSAAT Trigger: TGTGGCTGCACTGCTCAAGCTGACGGCCCACTGTGCGACTGGCCAACAGCTGGACCATAAGCGCGGCATTGAGGCACTCTGGCACGACGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTGCTGCTCTCCTGACACCGCGCTGTTAGGTCCCATGAGAGGCTTCCCTCAGTGGGCCGTCAGCTaGAGCAGTGCAGCCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: LSCCSPDTALLGPMRGFPQWAVS*SSAATL Trigger: CAGTGTGGCTGCACTGCTCAAGCTGACGGCCCACTG...AGGGAAGCCTCTCATGGGACCTAACAGCGCGGTGTCAGGAGAGCAGCAGGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CAA 90 bp | AACGCAGGCAGGGACCTGCATACGAACAAGAGGGCCAGCAGAGGCAGACAGGACCAGTGGGCCGTCAGCTaGAGCAGTGCAGCCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: NAGRDLHTNKRASRGRQDQWAVS*SSAATL Trigger: CAGTGTGGCTGCACTGCTCAAGCTGACGGCCCACTG...GTCCTGTCTGCCTCTGCTGGCCCTCTTGTTCGTATGCAGGTCCCTGCCTGCGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CAA 90 bp | CTGACACTCTCCTGCTGCTCTCCTGACACCGCGCTGTTAGGTCCCATGAGAGGCCTTATGGTCCAGCTGTaGGCCAGTCGCACAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LTLSCCSPDTALLGPMRGLMVQL*ASRTVG Trigger: GCCCACTGTGCGACTGGCCAACAGCTGGACCATAAG...GCCTCTCATGGGACCTAACAGCGCGGTGTCAGGAGAGCAGCAGGAGAGTGTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS CCA 90 bp | GTGAAGTACTGGTCCACGTCCAGGCAGAACACAAAGTCAGCTTCTTaGCCCAGCTGCCCTCCCAGAGCCTCGTGTAGCGTGGGCATGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VKYWSTSRQNTKSAS*PSCPPRASCSVGMR Trigger: ACGCATGCCCACGCTACACGAGGCTCTGGGAGGGCAGCTGGGCCAAGAAGCTGACTTTGTGTTCTGCCTGGACGTGGACCAGTACTTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS GCA 90 bp | GCTCCCCAAGAGGTACAGGTCAGGACTTCAGGCCGGGCCCAGTGGTaGAGTACTCCTGTGAAATTGTCCCTCGGCAGAGGCATTATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: APQEVQVRTSGRAQW*STPVKLSLGRGIMA Trigger: AGCCATAATGCCTCTGCCGAGGGACAATTTCACAGGAGTACTGCACCACTGGGCCCGGCCTGAAGTCCTGACCTGTACCTCTTGGGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS CCA 90 bp | GGTGCTCCCCAAGAGGTACAGGTCAGGACTTCAGGCCGGGCCCAGTaGTGCAGTACTCCTGTGAAATTGTCCCTCGGCAGAGGCATTATG | + |
|
Preference number: 5 (lower is better) Translates to: GAPQEVQVRTSGRAQ*CSTPVKLSLGRGIM Trigger: CATAATGCCTCTGCCGAGGGACAATTTCACAGGAGTACTGCACCACTGGGCCCGGCCTGAAGTCCTGACCTGTACCTCTTGGGGAGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CAA 90 bp | AATAAACGCAGGCAGGGACCTGCATACGAACAAGAGGGCCAGCAGAGGCAGACACTTATGGTCCAGCTGTaGGCCAGTCGCACAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NKRRQGPAYEQEGQQRQTLMVQL*ASRTVG Trigger: GCCCACTGTGCGACTGGCCAACAGCTGGACCATAAG...TGTCTGCCTCTGCTGGCCCTCTTGTTCGTATGCAGGTCCCTGCCTGCGTTTATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCCAGCAGAGGCAGACAGGACGGAGAGCTGAGGCTGAAGTCGGTGAGGACCTTCAGCCAGAAGAACTaGTTAAGGTGGCTTTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RASRGRQDGELRLKSVRTFSQKN*LRWLSS Trigger: CGACGAAAGCCACCTTAACAAGTTCTTCTGGCTGAA...GGTCCTCACCGACTTCAGCCTCAGCTCTCCGTCCTGTCTGCCTCTGCTGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS TCA 90 bp | AAATGCAGACAGGAAGAACCGCCACAGGAGTCTCTTCTTGGCCCGTaGAAGTCCCCAGGTTGGCTTCCCTGGGCCTCTTTGTCTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KCRQEEPPQESLLGP*KSPGWLPWASLSLS Trigger: GGACAGAGACAAAGAGGCCCAGGGAAGCCAACCTGGGGACTTTCACGGGCCAAGAAGAGACTCCTGTGGCGGTTCTTCCTGTCTGCATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| CDS GCA 90 bp | TTGCTGGGCTACATGAGGGTCGAAAGTGCCATCCCAAATAATTGGTaGTCCCCAAGAGGTACAGGTCAGGACTTCAGGCCGGGCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLGYMRVESAIPNNW*SPRGTGQDFRPGPV Trigger: CACTGGGCCCGGCCTGAAGTCCTGACCTGTACCTCTTGGGGAGCACCAATTATTTGGGATGGCACTTTCGACCCTCATGTAGCCCAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS GCA 90 bp | GAGCAGGCGTGGGTGATGGATCTCTCTCCTCCAGATAATTTCCTCTaGCCAGCAGAACTCAGGCGACAGCAGCTTGGTGGGCTTGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: EQAWVMDLSPPDNFL*PAELRRQQLGGLVQ Trigger: CTGAACAAGCCCACCAAGCTGCTGTCGCCTGAGTTCTGCTGGGCAGAGGAAATTATCTGGAGGAGAGAGATCCATCACCCACGCCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS CCA 90 bp | CTCTTGCTGGGCTACATGAGGGTCGAAAGTGCCATCCCAAATAATTaGTGCTCCCCAAGAGGTACAGGTCAGGACTTCAGGCCGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLGYMRVESAIPNN*CSPRGTGQDFRPGP Trigger: TGGGCCCGGCCTGAAGTCCTGACCTGTACCTCTTGGGGAGCACCAATTATTTGGGATGGCACTTTCGACCCTCATGTAGCCCAGCAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS CCA 90 bp | ACCAAATCTGCCAGCACCTCAGGCCCGAAGTTACCGGTGAAGTACTaGTCCACGTCCAGGCAGAACACAAAGTCAGCTTCTTGGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TKSASTSGPKLPVKY*STSRQNTKSASWPS Trigger: GCTGGGCCAAGAAGCTGACTTTGTGTTCTGCCTGGACGTGGACCAGTACTTCACCGGTAACTTCGGGCCTGAGGTGCTGGCAGATTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGGCCTTGTCCCCAAGGCCTCTGCAAAAGCTTTAATCCTGGTAGGTGGTACCACAAAGTCAGCTTCTaGGCCCAGCTGCCCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRPCPQGLCKSFNPGRWYHKVSF*AQLPSQ Trigger: CTGGGAGGGCAGCTGGGCCAAGAAGCTGACTTTGTG...GTACCACCTACCAGGATTAAAGCTTTTGCAGAGGCCTTGGGGACAAGGCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS TCA 90 bp | GCTGTGCCACCAAATCTGCCAGCACCTCAGGCCCGAAGTTACCGGTaGAGTACTGGTCCACGTCCAGGCAGAACACAAAGTCAGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AVPPNLPAPQARSYR*STGPRPGRTQSQLL Trigger: AAGAAGCTGACTTTGTGTTCTGCCTGGACGTGGACCAGTACTTCACCGGTAACTTCGGGCCTGAGGTGCTGGCAGATTTGGTGGCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS GCA 90 bp | GTGGGCTTGTTCAGCCAGAAGAACTTGTTAAGGTGGCTTTCGTCGTaGCAGAGTGCCTCAATGCCGCGCTTATGGTCCAGCTGTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VGLFSQKNLLRWLSS*QSASMPRLWSSCWP Trigger: TGGCCAACAGCTGGACCATAAGCGCGGCATTGAGGCACTCTGGCACGACGAAAGCCACCTTAACAAGTTCTTCTGGCTGAACAAGCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS TCA 90 bp | TTTCGCACCAGCGTATATTCCTTGGGTGCCCAGAGCAGGCGTGGGTaGTGGATCTCTCTCCTCCAGATAATTTCCTCTGCCCAGCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FRTSVYSLGAQSRRG*WISLLQIISSAQQN Trigger: GTTCTGCTGGGCAGAGGAAATTATCTGGAGGAGAGAGATCCATCACCCACGCCTGCTCTGGGCACCCAAGGAATATACGCTGGTGCGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCTAAAGGGAGTTGGGCTGGAAGGAAGATCTAACTCTCATTCTTCCGCTCACAAAGTCAGCTTCTaGGCCCAGCTGCCCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLKGVGLEGRSNSHSSAHKVSF*AQLPSQ Trigger: CTGGGAGGGCAGCTGGGCCAAGAAGCTGACTTTGTG...AGCGGAAGAATGAGAGTTAGATCTTCCTTCCAGCCCAACTCCCTTTAGGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| CDS GCA 90 bp | AAACACATAGTACACCACGTTCTGGCCGACCATGAAGTGCTGCTCTaGCGATACCAGGAAGTGTTCCAGGTACTTCTCCAGGTACCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KHIVHHVLADHEVLL*RYQEVFQVLLQVPA Trigger: GGCAGGTACCTGGAGAAGTACCTGGAACACTTCCTGGTATCGGCAGAGCAGCACTTCATGGTCGGCCAGAACGTGGTGTACTATGTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS-3UTR CAA 90 bp | CTACAGGCCCCAGGTACAGGATCTCTTTTCAATATCTCTGAGTTCCAAAGTCCCTCAGGCGACAGCAGCTaGGTGGGCTTGTTCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQAPGTGSLFNISEFQSPSGDSS*VGLFSQ Trigger: CTGGCTGAACAAGCCCACCAAGCTGCTGTCGCCTGA...GGGACTTTGGAACTCAGAGATATTGAAAAGAGATCCTGTACCTGGGGCCTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCTAAAGGGAGTTGGGCTGGAAGGAAGATCTAACTCTCATTCTTCCGCTAGCAGCTTGGTGGGCTaGTTCAGCCAGAAGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLKGVGLEGRSNSHSSASSLVG*FSQKNL Trigger: CAAGTTCTTCTGGCTGAACAAGCCCACCAAGCTGCT...AGCGGAAGAATGAGAGTTAGATCTTCCTTCCAGCCCAACTCCCTTTAGGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| CDS-3UTR CAA 90 bp | CTACAGGCCCCAGGTACAGGATCTCTTTTCAATATCTCTGAGTTCCAAAGTCCCAGCAGCTTGGTGGGCTaGTTCAGCCAGAAGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LQAPGTGSLFNISEFQSPSSLVG*FSQKNL Trigger: CAAGTTCTTCTGGCTGAACAAGCCCACCAAGCTGCT...GGGACTTTGGAACTCAGAGATATTGAAAAGAGATCCTGTACCTGGGGCCTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS-3UTR CAA 90 bp | GGATACAAAAGCTGCCAGAATTCTTGCCTTTCCATAATTTGCTTCTGGTTGGAGTCAGGCGACAGCAGCTaGGTGGGCTTGTTCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GYKSCQNSCLSIICFWLESGDSS*VGLFSQ Trigger: CTGGCTGAACAAGCCCACCAAGCTGCTGTCGCCTGA...CTCCAACCAGAAGCAAATTATGGAAAGGCAAGAATTCTGGCAGCTTTTGTATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS-3UTR CAA 90 bp | GGATACAAAAGCTGCCAGAATTCTTGCCTTTCCATAATTTGCTTCTGGTTGGAGGTGAAAGTCCCCAGGTaGGCTTCCCTGGGCCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GYKSCQNSCLSIICFWLEVKVPR*ASLGLF Trigger: AAAGAGGCCCAGGGAAGCCAACCTGGGGACTTTCAC...CTCCAACCAGAAGCAAATTATGGAAAGGCAAGAATTCTGGCAGCTTTTGTATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGTACAGGATCTCTTTTCAATATCTCTGAGTTCCAAAGTCCCCCTTCCCAGTTCAGCCAGAAGAACTaGTTAAGGTGGCTTTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PGTGSLFNISEFQSPPSQFSQKN*LRWLSS Trigger: CGACGAAAGCCACCTTAACAAGTTCTTCTGGCTGAA...CTGGGAAGGGGGACTTTGGAACTCAGAGATATTGAAAAGAGATCCTGTACCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS-3UTR CAA 90 bp | CTCTTTTCAATATCTCTGAGTTCCAAAGTCCCCCTTCCCAGAGGCGCTATAAGTCACAGGAGTCTCTTCTaGGCCCTGAATTCAATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFSISLSSKVPLPRGAISHRSLF*ALNSMR Trigger: TCTCATTGAATTCAGGGCCAAGAAGAGACTCCTGTG...ACTTATAGCGCCTCTGGGAAGGGGGACTTTGGAACTCAGAGATATTGAAAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106077.8 |
||
| CDS GCA 72 bp | CGTGCCATGGACACGTCCTGCCAGCGCCTCTCTCGCTaGACGGGTTTTGCCCGCAGCAGGCGACCCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RAMDTSCQRLSR*TGFARSRRPWP Trigger: AGGCCAGGGTCGCCTGCTGCGGGCAAAACCCGTGCAGCGAGAGAGGCGCTGGCAGGACGTGTCCATGGCACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS GCA 72 bp | CCAGCTGCCCTCCCAGAGCCTCGTGTAGCGTGGGCATaGGTGCCATGGACACGTCCTGCCAGCGCCTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PAALPEPRVAWA*VPWTRPASASL Trigger: GAGAGAGGCGCTGGCAGGACGTGTCCATGGCACGCATGCCCACGCTACACGAGGCTCTGGGAGGGCAGCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS CCA 72 bp | CTCCCAGAGCCTCGTGTAGCGTGGGCATGCGTGCCATaGACACGTCCTGCCAGCGCCTCTCTCGCTGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: LPEPRVAWACVP*TRPASASLAAR Trigger: CCGTGCAGCGAGAGAGGCGCTGGCAGGACGTGTCCATGGCACGCATGCCCACGCTACACGAGGCTCTGGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS CAA 90 bp | GTGCCATGGACACGTCCTGCCAGCGCCTCTCTCGCTGCACGGGTTTaGCCCGCAGCAGGCGACCCTGGCCTAGAGCCACATAGGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: VPWTRPASASLAARV*PAAGDPGLEPHRAL Trigger: CAGTGCCCTATGTGGCTCTAGGCCAGGGTCGCCTGCTGCGGGCAAAACCCGTGCAGCGAGAGAGGCGCTGGCAGGACGTGTCCATGGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS GCA 72 bp | CCACCGCGGCCAGCGGTAGTGCCAGGCGTGCAGCTGTaGCACCAAATCTGCCAGCACCTCAGGCCCGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PPRPAVVPGVQL*HQICQHLRPEV Trigger: AACTTCGGGCCTGAGGTGCTGGCAGATTTGGTGGCACAGCTGCACGCCTGGCACTACCGCTGGCCGCGGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS CAA 72 bp | TCCAGCTGTTGGCCAGTCGCACAGTGGGCCGTCAGCTaGAGCAGTGCAGCCACACTGCCGCCAAACACCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSCWPVAQWAVS*SSAATLPPNTA Trigger: TGCGGTGTTTGGCGGCAGTGTGGCTGCACTGCTCAAGCTGACGGCCCACTGTGCGACTGGCCAACAGCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS CAA 90 bp | TTCGTCGTGCCAGAGTGCCTCAATGCCGCGCTTATGGTCCAGCTGTaGGCCAGTCGCACAGTGGGCCGTCAGCTTGAGCAGTGCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: FVVPECLNAALMVQL*ASRTVGRQLEQCSH Trigger: GTGGCTGCACTGCTCAAGCTGACGGCCCACTGTGCGACTGGCCAACAGCTGGACCATAAGCGCGGCATTGAGGCACTCTGGCACGACGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS CCA 72 bp | CTTTCGTCGTGCCAGAGTGCCTCAATGCCGCGCTTATaGTCCAGCTGTTGGCCAGTCGCACAGTGGGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSSCQSASMPRL*SSCWPVAQWAV Trigger: GACGGCCCACTGTGCGACTGGCCAACAGCTGGACCATAAGCGCGGCATTGAGGCACTCTGGCACGACGAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS CAA 72 bp | CCAGAGTGCCTCAATGCCGCGCTTATGGTCCAGCTGTaGGCCAGTCGCACAGTGGGCCGTCAGCTTGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PECLNAALMVQL*ASRTVGRQLEQ Trigger: CTGCTCAAGCTGACGGCCCACTGTGCGACTGGCCAACAGCTGGACCATAAGCGCGGCATTGAGGCACTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS GCA 72 bp | GAGGTACAGGTCAGGACTTCAGGCCGGGCCCAGTGGTaGAGTACTCCTGTGAAATTGTCCCTCGGCAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EVQVRTSGRAQW*STPVKLSLGRG Trigger: GCCTCTGCCGAGGGACAATTTCACAGGAGTACTGCACCACTGGGCCCGGCCTGAAGTCCTGACCTGTACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS GCA 72 bp | TCCAGGCAGAACACAAAGTCAGCTTCTTGGCCCAGCTaGCCTCCCAGAGCCTCGTGTAGCGTGGGCATGCGT | + |
|
Preference number: 6 (lower is better) Translates to: SRQNTKSASWPS*PPRASCSVGMR Trigger: ACGCATGCCCACGCTACACGAGGCTCTGGGAGGGCAGCTGGGCCAAGAAGCTGACTTTGTGTTCTGCCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS GCA 72 bp | GCGGTAGTGCCAGGCGTGCAGCTGTGCCACCAAATCTaGCAGCACCTCAGGCCCGAAGTTACCGGTGAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: AVVPGVQLCHQI*QHLRPEVTGEV Trigger: TACTTCACCGGTAACTTCGGGCCTGAGGTGCTGGCAGATTTGGTGGCACAGCTGCACGCCTGGCACTACCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS CAA 72 bp | AGTCAGCCCGATGGTGAGGTTCCGCCGTCTCGCCTCTaGCTGGGCTACATGAGGGTCGAAAGTGCCATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SQPDGEVPPSRL*LGYMRVESAIP Trigger: TGGGATGGCACTTTCGACCCTCATGTAGCCCAGCAAGAGGCGAGACGGCGGAACCTCACCATCGGGCTGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS TCA 72 bp | CAGGAAGAACCGCCACAGGAGTCTCTTCTTGGCCCGTaGAAGTCCCCAGGTTGGCTTCCCTGGGCCTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QEEPPQESLLGP*KSPGWLPWASL Trigger: CAAAGAGGCCCAGGGAAGCCAACCTGGGGACTTTCACGGGCCAAGAAGAGACTCCTGTGGCGGTTCTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| CDS TCA 72 bp | GGTACCTGCCTACAGCAAACACAGTCAGCCCGATGGTaGGGTTCCGCCGTCTCGCCTCTTGCTGGGCTACAT | + |
|
Preference number: 6 (lower is better) Translates to: GTCLQQTQSARW*GSAVSPLAGLH Trigger: ATGTAGCCCAGCAAGAGGCGAGACGGCGGAACCTCACCATCGGGCTGACTGTGTTTGCTGTAGGCAGGTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS CCA 72 bp | ATGCAGACAGGAAGAACCGCCACAGGAGTCTCTTCTTaGCCCGTGAAAGTCCCCAGGTTGGCTTCCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MQTGRTATGVSS*PVKVPRLASLG Trigger: GCCCAGGGAAGCCAACCTGGGGACTTTCACGGGCCAAGAAGAGACTCCTGTGGCGGTTCTTCCTGTCTGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
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| CDS CAA 72 bp | TCAGGCCGGGCCCAGTGGTGCAGTACTCCTGTGAAATaGTCCCTCGGCAGAGGCATTATGGCTGTAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGRAQWCSTPVK*SLGRGIMAVGQ Trigger: CTGCCCTACAGCCATAATGCCTCTGCCGAGGGACAATTTCACAGGAGTACTGCACCACTGGGCCCGGCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS CCA 72 bp | CAAGAGGTACAGGTCAGGACTTCAGGCCGGGCCCAGTaGTGCAGTACTCCTGTGAAATTGTCCCTCGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QEVQVRTSGRAQ*CSTPVKLSLGR Trigger: TCTGCCGAGGGACAATTTCACAGGAGTACTGCACCACTGGGCCCGGCCTGAAGTCCTGACCTGTACCTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS CAA 72 bp | AATGCAGACAGGAAGAACCGCCACAGGAGTCTCTTCTaGGCCCGTGAAAGTCCCCAGGTTGGCTTCCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: NADRKNRHRSLF*ARESPQVGFPG Trigger: CCCAGGGAAGCCAACCTGGGGACTTTCACGGGCCAAGAAGAGACTCCTGTGGCGGTTCTTCCTGTCTGCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| CDS CCA 72 bp | GCCAGCACCTCAGGCCCGAAGTTACCGGTGAAGTACTaGTCCACGTCCAGGCAGAACACAAAGTCAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASTSGPKLPVKY*STSRQNTKSAS Trigger: AGAAGCTGACTTTGTGTTCTGCCTGGACGTGGACCAGTACTTCACCGGTAACTTCGGGCCTGAGGTGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS CAA 90 bp | AGCAAACACAGTCAGCCCGATGGTGAGGTTCCGCCGTCTCGCCTCTaGCTGGGCTACATGAGGGTCGAAAGTGCCATCCCAAATAATTGG | + |
|
Preference number: 6 (lower is better) Translates to: SKHSQPDGEVPPSRL*LGYMRVESAIPNNW Trigger: CCAATTATTTGGGATGGCACTTTCGACCCTCATGTAGCCCAGCAAGAGGCGAGACGGCGGAACCTCACCATCGGGCTGACTGTGTTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS TCA 72 bp | TTGTCTCTGTCCTTCTTGTTCTCGGCAACTTCCATGTaGCCCTGGCCAGCTCACTCCCAACTCTGTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSLSFLFSATSM*PWPAHSQLCPQ Trigger: CTGGGGACAGAGTTGGGAGTGAGCTGGCCAGGGTCACATGGAAGTTGCCGAGAACAAGAAGGACAGAGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| CDS TCA 72 bp | GTGAGGTTCCGCCGTCTCGCCTCTTGCTGGGCTACATaGGGGTCGAAAGTGCCATCCCAAATAATTGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VRFRRLASCWAT*GSKVPSQIIGA Trigger: AGCACCAATTATTTGGGATGGCACTTTCGACCCTCATGTAGCCCAGCAAGAGGCGAGACGGCGGAACCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS TCA 72 bp | CCAAATCTGCCAGCACCTCAGGCCCGAAGTTACCGGTaGAGTACTGGTCCACGTCCAGGCAGAACACAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PNLPAPQARSYR*STGPRPGRTQS Trigger: ACTTTGTGTTCTGCCTGGACGTGGACCAGTACTTCACCGGTAACTTCGGGCCTGAGGTGCTGGCAGATTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS GCA 72 bp | GTACACCACGTTCTGGCCGACCATGAAGTGCTGCTCTaGCGATACCAGGAAGTGTTCCAGGTACTTCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VHHVLADHEVLL*RYQEVFQVLLQ Trigger: CTGGAGAAGTACCTGGAACACTTCCTGGTATCGGCAGAGCAGCACTTCATGGTCGGCCAGAACGTGGTGTAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS GCA 72 bp | TGGGTGATGGATCTCTCTCCTCCAGATAATTTCCTCTaGCCAGCAGAACTCAGGCGACAGCAGCTTGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: WVMDLSPPDNFL*PAELRRQQLGG Trigger: CCCACCAAGCTGCTGTCGCCTGAGTTCTGCTGGGCAGAGGAAATTATCTGGAGGAGAGAGATCCATCACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
||
| CDS CAA 72 bp | ACAGGAGTCTCTTCTTGGCCCGTGAAAGTCCCCAGGTaGGCTTCCCTGGGCCTCTTTGTCTCTGTCCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: TGVSSWPVKVPR*ASLGLFVSVLL Trigger: AAGAAGGACAGAGACAAAGAGGCCCAGGGAAGCCAACCTGGGGACTTTCACGGGCCAAGAAGAGACTCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030585.8 |
||
| CDS CAA 72 bp | GCCCAGCAGAACTCAGGCGACAGCAGCTTGGTGGGCTaGTTCAGCCAGAAGAACTTGTTAAGGTGGCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: AQQNSGDSSLVG*FSQKNLLRWLS Trigger: CGAAAGCCACCTTAACAAGTTCTTCTGGCTGAACAAGCCCACCAAGCTGCTGTCGCCTGAGTTCTGCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS TCA 72 bp | AGCGTATATTCCTTGGGTGCCCAGAGCAGGCGTGGGTaGTGGATCTCTCTCCTCCAGATAATTTCCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SVYSLGAQSRRG*WISLLQIISSA Trigger: GGCAGAGGAAATTATCTGGAGGAGAGAGATCCATCACCCACGCCTGCTCTGGGCACCCAAGGAATATACGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS GCA 72 bp | TTCAGCCAGAAGAACTTGTTAAGGTGGCTTTCGTCGTaGCAGAGTGCCTCAATGCCGCGCTTATGGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: FSQKNLLRWLSS*QSASMPRLWSS Trigger: GCTGGACCATAAGCGCGGCATTGAGGCACTCTGGCACGACGAAAGCCACCTTAACAAGTTCTTCTGGCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS CCA 72 bp | CACCAGCGTATATTCCTTGGGTGCCCAGAGCAGGCGTaGGTGATGGATCTCTCTCCTCCAGATAATTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: HQRIFLGCPEQA*VMDLSPPDNFL Trigger: GAGGAAATTATCTGGAGGAGAGAGATCCATCACCCACGCCTGCTCTGGGCACCCAAGGAATATACGCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS GCA 72 bp | TACATGAGGGTCGAAAGTGCCATCCCAAATAATTGGTaGTCCCCAAGAGGTACAGGTCAGGACTTCAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: YMRVESAIPNNW*SPRGTGQDFRP Trigger: CGGCCTGAAGTCCTGACCTGTACCTCTTGGGGAGCACCAATTATTTGGGATGGCACTTTCGACCCTCATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS CCA 72 bp | GGCTACATGAGGGTCGAAAGTGCCATCCCAAATAATTaGTGCTCCCCAAGAGGTACAGGTCAGGACTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GYMRVESAIPNN*CSPRGTGQDFR Trigger: CCTGAAGTCCTGACCTGTACCTCTTGGGGAGCACCAATTATTTGGGATGGCACTTTCGACCCTCATGTAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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| CDS CAA 72 bp | ATTTCCTCTGCCCAGCAGAACTCAGGCGACAGCAGCTaGGTGGGCTTGTTCAGCCAGAAGAACTTGTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: ISSAQQNSGDSS*VGLFSQKNLLR Trigger: CCTTAACAAGTTCTTCTGGCTGAACAAGCCCACCAAGCTGCTGTCGCCTGAGTTCTGCTGGGCAGAGGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030585.8 ENSMUST00000106077.8 |
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