Pregenerated sensors for A2ML1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047228Ensembl transcript IDs: ENSMUST00000060574.9
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GATGGGAGGTGCTTGATCAGGCTCTTGGTAGGATGGTaGCCAGGAGAACAGTTTATTCAAAGAAATAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: DGRCLIRLLVGW*PGEQFIQRNSL Trigger: GAGACTATTTCTTTGAATAAACTGTTCTCCTGGTCACCATCCTACCAAGAGCCTGATCAAGCACCTCCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CCA 90 bp | TACGGGAGTGTGAAGTACACGCTCTCAGGTGTCATTTCTTGTCCGTaGTTCAGTAGAAGGGCACTTTTGTCCACTGCTCGCAGGGCACAG | + |
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Preference number: 5 (lower is better) Translates to: YGSVKYTLSGVISCP*FSRRALLSTARRAQ Trigger: CTGTGCCCTGCGAGCAGTGGACAAAAGTGCCCTTCTACTGAACCACGGACAAGAAATGACACCTGAGAGCGTGTACTTCACACTCCCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 90 bp | TCTTTGATGGCCACTTTTGCATGGCTGATGCTGTCCACAGAGTCATaGAAGGCAGAAGAAGGTGGGGCGCCACCACCGTACATCATTATC | + |
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Preference number: 5 (lower is better) Translates to: SLMATFAWLMLSTES*KAEEGGAPPPYIII Trigger: GATAATGATGTACGGTGGTGGCGCCCCACCTTCTTCTGCCTTTCATGACTCTGTGGACAGCATCAGCCATGCAAAAGTGGCCATCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 90 bp | TCATCAACAGGCTTCAGCCAGATGTTCAGTGTCACAACGCGAAAGTaGACTGTGTCTCCAGGTTTATGGACCGGTGTGTCTGTCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: SSTGFSQMFSVTTRK*TVSPGLWTGVSVCT Trigger: TGTGCAGACAGACACACCGGTCCATAAACCTGGAGACACAGTTCACTTTCGCGTTGTGACACTGAACATCTGGCTGAAGCCTGTTGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS GCA 90 bp | TGTCCTGGGGAAGTTTGTCCTCACTGTCTCTTTGATGGCCACTTTTaGATGGCTGATGCTGTCCACAGAGTCATGAAAGGCAGAAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: CPGEVCPHCLFDGHF*MADAVHRVMKGRRR Trigger: CCTTCTTCTGCCTTTCATGACTCTGTGGACAGCATCAGCCATGCAAAAGTGGCCATCAAAGAGACAGTGAGGACAAACTTCCCCAGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 90 bp | GAGTTGCTTCTTTTTCAATACCTTCAGCCTCTACCAGCATGGTTTTaGCGACAGTGTCTTTCCAGTGGACATCTTGCTCCTTACTGGCGT | + |
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Preference number: 5 (lower is better) Translates to: ELLLFQYLQPLPAWF*RQCLSSGHLAPYWR Trigger: ACGCCAGTAAGGAGCAAGATGTCCACTGGAAAGACACTGTCGTCAAAACCATGCTGGTAGAGGCTGAAGGTATTGAAAAAGAAGCAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS GCA 90 bp | TGTAACCATTTGAAATTGACTGTCCGCAATGGTTATTGTCTCTGGTaGAGTGAGCTCGACTTCAAATTTGGGCAAAACGTCTCGGTTAAC | + |
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Preference number: 5 (lower is better) Translates to: CNHLKLTVRNGYCLW*SELDFKFGQNVSVN Trigger: GTTAACCGAGACGTTTTGCCCAAATTTGAAGTCGAGCTCACTGCACCAGAGACAATAACCATTGCGGACAGTCAATTTCAAATGGTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS GCA 90 bp | TTTTATCTGGGCTTTTCCCTGCACAGGCTGGCCATAGGTGTACTTTaGACATGTAACCATTTGAAATTGACTGTCCGCAATGGTTATTGT | + |
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Preference number: 5 (lower is better) Translates to: FYLGFSLHRLAIGVL*TCNHLKLTVRNGYC Trigger: ACAATAACCATTGCGGACAGTCAATTTCAAATGGTTACATGTGCAAAGTACACCTATGGCCAGCCTGTGCAGGGAAAAGCCCAGATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS GCA 90 bp | GTGCCAAGCACGGAAGTGATAAAAACCGAGTGTGTTTTACTCATCTaGACACCTGTTCCAGATTCTGTAACCACTTCGTTAACATTCAAG | + |
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Preference number: 5 (lower is better) Translates to: VPSTEVIKTECVLLI*TPVPDSVTTSLTFK Trigger: CTTGAATGTTAACGAAGTGGTTACAGAATCTGGAACAGGTGTGCAGATGAGTAAAACACACTCGGTTTTTATCACTTCCGTGCTTGGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CCA 90 bp | ACATGTAACCATTTGAAATTGACTGTCCGCAATGGTTATTGTCTCTaGTGCAGTGAGCTCGACTTCAAATTTGGGCAAAACGTCTCGGTT | + |
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Preference number: 5 (lower is better) Translates to: TCNHLKLTVRNGYCL*CSELDFKFGQNVSV Trigger: AACCGAGACGTTTTGCCCAAATTTGAAGTCGAGCTCACTGCACCAGAGACAATAACCATTGCGGACAGTCAATTTCAAATGGTTACATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CCA 90 bp | AGAATCAAAAGCATATTCACCTTTTTCATAGCTGTAGACCGTGACTaGGGCTGGCTGGATATTGGCCACATGGTTAGTTTGTTCAATGGA | + |
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Preference number: 5 (lower is better) Translates to: RIKSIFTFFIAVDRD*GWLDIGHMVSLFNG Trigger: TCCATTGAACAAACTAACCATGTGGCCAATATCCAGCCAGCCCCAGTCACGGTCTACAGCTATGAAAAAGGTGAATATGCTTTTGATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 90 bp | AGCTCGACTTCAAATTTGGGCAAAACGTCTCGGTTAACAGTGAAATaGTCCATCACTGTCGTTCCCGATTGTGTTTTTATGACGATTGTG | + |
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Preference number: 5 (lower is better) Translates to: SSTSNLGKTSRLTVK*SITVVPDCVFMTIV Trigger: CACAATCGTCATAAAAACACAATCGGGAACGACAGTGATGGATCATTTCACTGTTAACCGAGACGTTTTGCCCAAATTTGAAGTCGAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS GCA 72 bp | ACTGTGTCTCCAGGTTTATGGACCGGTGTGTCTGTCTaGACAAAAGTGGCGTTCTCCTCAGCAGCGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: TVSPGLWTGVSV*TKVAFSSAAMA Trigger: GGCCATCGCTGCTGAGGAGAACGCCACTTTTGTGCAGACAGACACACCGGTCCATAAACCTGGAGACACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CCA 72 bp | GCATTGCCATTGACACAGAAGGCGCTGGCCTCCCACTaGGTGATGGTATCAGGGACCAGGAACGAGACATTT | + |
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Preference number: 6 (lower is better) Translates to: ALPLTQKALASH*VMVSGTRNETF Trigger: AAATGTCTCGTTCCTGGTCCCTGATACCATCACCCAGTGGGAGGCCAGCGCCTTCTGTGTCAATGGCAATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 72 bp | GCGCCACCACCGTACATCATTATCCGTTCATTTGGGTaGTCGAACGTCCTCAGCAAGGGCTGGTTTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: APPPYIIIRSFG*SNVLSKGWFSW Trigger: CCAGGAAAACCAGCCCTTGCTGAGGACGTTCGATCACCCAAATGAACGGATAATGATGTACGGTGGTGGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CCA 72 bp | TGGGGCGCCACCACCGTACATCATTATCCGTTCATTTaGGTGATCGAACGTCCTCAGCAAGGGCTGGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: WGATTVHHYPFI*VIERPQQGLVF Trigger: GAAAACCAGCCCTTGCTGAGGACGTTCGATCACCCAAATGAACGGATAATGATGTACGGTGGTGGCGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CAA 72 bp | GTCATTTCTTGTCCGTGGTTCAGTAGAAGGGCACTTTaGTCCACTGCTCGCAGGGCACAGAAGGAGTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: VISCPWFSRRAL*STARRAQKESG Trigger: CCCTGACTCCTTCTGTGCCCTGCGAGCAGTGGACAAAAGTGCCCTTCTACTGAACCACGGACAAGAAATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 72 bp | ATGTATCGCGGTTCTGCAGCCACAACATCAGTGAAATaGAGCAGGAGGGCACTGAGCAAGATGGTAGGCACC | + |
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Preference number: 6 (lower is better) Translates to: MYRGSAATTSVK*SRRALSKMVGT Trigger: GGTGCCTACCATCTTGCTCAGTGCCCTCCTGCTTCATTTCACTGATGTTGTGGCTGCAGAACCGCGATACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 72 bp | GCCAGAGAGCATCTTCACATCCACAAGGACTGTAACTaGGCTTTCACGAGCTCCAGTGTAGGTGAGGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: AREHLHIHKDCN*AFTSSSVGEGH Trigger: GTGACCCTCACCTACACTGGAGCTCGTGAAAGCTCAGTTACAGTCCTTGTGGATGTGAAGATGCTCTCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS GCA 72 bp | TACCACGGAAGAAACCCACAGGATGTATCGCGGTTCTaGAGCCACAACATCAGTGAAATGAAGCAGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: YHGRNPQDVSRF*SHNISEMKQEG Trigger: GCCCTCCTGCTTCATTTCACTGATGTTGTGGCTGCAGAACCGCGATACATCCTGTGGGTTTCTTCCGTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS GCA 72 bp | AGCTTGCGTGTAGCCATTGGTGACACCATTCGAAAATaGCTCTTCCAGGCAATAGAGACCATTGCGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: SLRVAIGDTIRK*LFQAIETIAEG Trigger: GCCCTCCGCAATGGTCTCTATTGCCTGGAAGAGGCATTTTCGAATGGTGTCACCAATGGCTACACGCAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CCA 72 bp | ACTTCATGTATTGGGTTAGAGCGAGAAGGCACACTGTaGTGTCCTGCATGGCAGAGAAGCCTCCATGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: TSCIGLEREGTL*CPAWQRSLHGS Trigger: ACTCCCATGGAGGCTTCTCTGCCATGCAGGACACCACAGTGTGCCTTCTCGCTCTAACCCAATACATGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CAA 72 bp | AGGGAAAATCCTGAGGCCTCCTTAGGAAGTGGCACGTaGTACCTGAGGGTGGCCTGGATAAATGAGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: RENPEASLGSGT*YLRVAWINEHP Trigger: TGGATGCTCATTTATCCAGGCCACCCTCAGGTACAACGTGCCACTTCCTAAGGAGGCCTCAGGATTTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CAA 90 bp | GAGGTAACTTCCACGAAGAAGGGCTGGGAGATCTGTAGGGACACTTaGGGTGAAATGCCAAACCCAGCATTGCCATTGACACAGAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: EVTSTKKGWEICRDT*GEMPNPALPLTQKA Trigger: CGCCTTCTGTGTCAATGGCAATGCTGGGTTTGGCATTTCACCCAAAGTGTCCCTACAGATCTCCCAGCCCTTCTTCGTGGAAGTTACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 72 bp | GGCTTCAGCCAGATGTTCAGTGTCACAACGCGAAAGTaGACTGTGTCTCCAGGTTTATGGACCGGTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: GFSQMFSVTTRK*TVSPGLWTGVS Trigger: AGACACACCGGTCCATAAACCTGGAGACACAGTTCACTTTCGCGTTGTGACACTGAACATCTGGCTGAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CCA 72 bp | GATGCTGTCCACAGAGTCATGAAAGGCAGAAGAAGGTaGGGCGCCACCACCGTACATCATTATCCGTTCATT | + |
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Preference number: 6 (lower is better) Translates to: DAVHRVMKGRRR*GATTVHHYPFI Trigger: AATGAACGGATAATGATGTACGGTGGTGGCGCCCCACCTTCTTCTGCCTTTCATGACTCTGTGGACAGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CCA 72 bp | ACGGAAAAGGGTGAGGTAACTTCCACGAAGAAGGGCTaGGAGATCTGTAGGGACACTTTGGGTGAAATGCCA | + |
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Preference number: 6 (lower is better) Translates to: TEKGEVTSTKKG*EICRDTLGEMP Trigger: TGGCATTTCACCCAAAGTGTCCCTACAGATCTCCCAGCCCTTCTTCGTGGAAGTTACCTCACCCTTTTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CCA 72 bp | TTTCCAGTGGACATCTTGCTCCTTACTGGCGTCATTTaGGCAAGCCCTGCTCTGTTTGGATGTAGCCACTAC | + |
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Preference number: 6 (lower is better) Translates to: FPVDILLLTGVI*ASPALFGCSHY Trigger: GTAGTGGCTACATCCAAACAGAGCAGGGCTTGCCCAAATGACGCCAGTAAGGAGCAAGATGTCCACTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CAA 72 bp | GACTGGGGCTGGCTGGATATTGGCCACATGGTTAGTTaGTTCAATGGAGAAGGTGAGGCTGGTTGCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: DWGWLDIGHMVS*FNGEGEAGCFL Trigger: AAGGAAGCAACCAGCCTCACCTTCTCCATTGAACAAACTAACCATGTGGCCAATATCCAGCCAGCCCCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CAA 72 bp | ATCCATGTCCTGGGGAAGTTTGTCCTCACTGTCTCTTaGATGGCCACTTTTGCATGGCTGATGCTGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: IHVLGKFVLTVS*MATFAWLMLST Trigger: TGTGGACAGCATCAGCCATGCAAAAGTGGCCATCAAAGAGACAGTGAGGACAAACTTCCCCAGGACATGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 72 bp | TCCTCAGACTCCTCTGAGCTCAGCGTGATGGTGTTTTaGGGGTTAGAGCCGGTTAACTTCATGTATTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: SSDSSELSVMVF*GLEPVNFMYWV Trigger: AACCCAATACATGAAGTTAACCGGCTCTAACCCTCAAAACACCATCACGCTGAGCTCAGAGGAGTCTGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS GCA 72 bp | GAAGTTTGTCCTCACTGTCTCTTTGATGGCCACTTTTaGATGGCTGATGCTGTCCACAGAGTCATGAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: EVCPHCLFDGHF*MADAVHRVMKG Trigger: GCCTTTCATGACTCTGTGGACAGCATCAGCCATGCAAAAGTGGCCATCAAAGAGACAGTGAGGACAAACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CCA 72 bp | CCCAATATTGGTTCCGGCGTCAGTTGGAAGGAGAGCTaGGTAATGTTTCTGAAAGTGGTCACATTGATCCAC | + |
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Preference number: 6 (lower is better) Translates to: PNIGSGVSWKES*VMFLKVVTLIH Trigger: GTGGATCAATGTGACCACTTTCAGAAACATTACCCAGCTCTCCTTCCAACTGACGCCGGAACCAATATTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 72 bp | ATTGACTGTCCGCAATGGTTATTGTCTCTGGTGCAGTaGGCTCGACTTCAAATTTGGGCAAAACGTCTCGGT | + |
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Preference number: 6 (lower is better) Translates to: IDCPQWLLSLVQ*ARLQIWAKRLG Trigger: ACCGAGACGTTTTGCCCAAATTTGAAGTCGAGCTCACTGCACCAGAGACAATAACCATTGCGGACAGTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 72 bp | CCTGGAGGACTTCACTGTCGGTGTTACGCTGGGTGTTaGTGCTTGCTTCATAATTCTCAGATGCTTCTAACT | + |
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Preference number: 6 (lower is better) Translates to: PGGLHCRCYAGC*CLLHNSQMLLT Trigger: AGTTAGAAGCATCTGAGAATTATGAAGCAAGCATCAACACCCAGCGTAACACCGACAGTGAAGTCCTCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 72 bp | CTTCTCTGTCTCACCAGAAAGTGCCGAAGGAATGAATaGTGGAGAGTTGTCTGTCTCGGGTTTCTCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: LLCLTRKCRRNE*WRVVCLGFLIS Trigger: AGAGATGAGAAACCCGAGACAGACAACTCTCCATCATTCATTCCTTCGGCACTTTCTGGTGAGACAGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS GCA 72 bp | GGCTTTTCCCTGCACAGGCTGGCCATAGGTGTACTTTaGACATGTAACCATTTGAAATTGACTGTCCGCAAT | + |
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Preference number: 6 (lower is better) Translates to: GFSLHRLAIGVL*TCNHLKLTVRN Trigger: ATTGCGGACAGTCAATTTCAAATGGTTACATGTGCAAAGTACACCTATGGCCAGCCTGTGCAGGGAAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS GCA 72 bp | CTGCTCACAGATTTCATTCTCATTGCTCTCACAATGTaGCGGGGAGAAGAGCTCTCTGCACACTTTTATCTG | + |
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Preference number: 6 (lower is better) Translates to: LLTDFILIALTM*RGEELSAHFYL Trigger: CAGATAAAAGTGTGCAGAGAGCTCTTCTCCCCGGCACATTGTGAGAGCAATGAGAATGAAATCTGTGAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CCA 72 bp | AGCATATTCACCTTTTTCATAGCTGTAGACCGTGACTaGGGCTGGCTGGATATTGGCCACATGGTTAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SIFTFFIAVDRD*GWLDIGHMVSL Trigger: CAAACTAACCATGTGGCCAATATCCAGCCAGCCCCAGTCACGGTCTACAGCTATGAAAAAGGTGAATATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CAA 72 bp | GATTGTGTAATCCCCCAATATTGGTTCCGGCGTCAGTaGGAAGGAGAGCTGGGTAATGTTTCTGAAAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: DCVIPQYWFRRQ*EGELGNVSESG Trigger: ACCACTTTCAGAAACATTACCCAGCTCTCCTTCCAACTGACGCCGGAACCAATATTGGGGGATTACACAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CAA 72 bp | GGTGTAATTTCCTACAGGTTTGCCGTCGAGTTCCAGTaGCAAAAGTTTGTCCACCAGTGGTGTGTTATTGGG | + |
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Preference number: 6 (lower is better) Translates to: GVISYRFAVEFQ*QKFVHQWCVIG Trigger: CCCAATAACACACCACTGGTGGACAAACTTTTGCAACTGGAACTCGACGGCAAACCTGTAGGAAATTACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CAA 72 bp | TCACCAGAAAGTGCCGAAGGAATGAATGATGGAGAGTaGTCTGTCTCGGGTTTCTCATCTCTCTCCCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: SPESAEGMNDGE*SVSGFSSLSQY Trigger: ATACTGGGAGAGAGATGAGAAACCCGAGACAGACAACTCTCCATCATTCATTCCTTCGGCACTTTCTGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CAA 90 bp | CTCATCTGTGGTGTAATTTCCTACAGGTTTGCCGTCGAGTTCCAGTaGCAAAAGTTTGTCCACCAGTGGTGTGTTATTGGGACCAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: LICGVISYRFAVEFQ*QKFVHQWCVIGTRK Trigger: TTTTCTGGTCCCAATAACACACCACTGGTGGACAAACTTTTGCAACTGGAACTCGACGGCAAACCTGTAGGAAATTACACCACAGATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 72 bp | ATTTCTGTTAACATAGAAAACCTCCTCAGACTCCTCTaGGCTCAGCGTGATGGTGTTTTGAGGGTTAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: ISVNIENLLRLL*AQRDGVLRVRA Trigger: GGCTCTAACCCTCAAAACACCATCACGCTGAGCTCAGAGGAGTCTGAGGAGGTTTTCTATGTTAACAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 72 bp | CGTTACTTGACTATTGAATTTAAGCTCCTCGGTGGATaGGACGACAGGAGTAAAGCCAGAGAGCATCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: RYLTIEFKLLGG*DDRSKAREHLH Trigger: GTGAAGATGCTCTCTGGCTTTACTCCTGTCGTCTCATCCACCGAGGAGCTTAAATTCAATAGTCAAGTAACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 72 bp | AATGATCCATCACTGTCGTTCCCGATTGTGTTTTTATaGCGATTGTGTAATCCCCCAATATTGGTTCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: NDPSLSFPIVFL*RLCNPPILVPA Trigger: CGCCGGAACCAATATTGGGGGATTACACAATCGTCATAAAAACACAATCGGGAACGACAGTGATGGATCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS GCA 72 bp | TTGAAATTGACTGTCCGCAATGGTTATTGTCTCTGGTaGAGTGAGCTCGACTTCAAATTTGGGCAAAACGTC | + |
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Preference number: 6 (lower is better) Translates to: LKLTVRNGYCLW*SELDFKFGQNV Trigger: GACGTTTTGCCCAAATTTGAAGTCGAGCTCACTGCACCAGAGACAATAACCATTGCGGACAGTCAATTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CAA 72 bp | AGTGGTCACATTGATCCACTGAAAAATCACATTGCTTaGGGGATCCTGAACGGTGATCAAGGGATACAAGTC | + |
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Preference number: 6 (lower is better) Translates to: SGHIDPLKNHIA*GILNGDQGIQV Trigger: GACTTGTATCCCTTGATCACCGTTCAGGATCCCCAAAGCAATGTGATTTTTCAGTGGATCAATGTGACCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CAA 72 bp | AGGCTGGCCATAGGTGTACTTTGCACATGTAACCATTaGAAATTGACTGTCCGCAATGGTTATTGTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RLAIGVLCTCNH*KLTVRNGYCLW Trigger: CCAGAGACAATAACCATTGCGGACAGTCAATTTCAAATGGTTACATGTGCAAAGTACACCTATGGCCAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CAA 90 bp | TTTTATGACGATTGTGTAATCCCCCAATATTGGTTCCGGCGTCAGTaGGAAGGAGAGCTGGGTAATGTTTCTGAAAGTGGTCACATTGAT | + |
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Preference number: 6 (lower is better) Translates to: FYDDCVIPQYWFRRQ*EGELGNVSESGHID Trigger: ATCAATGTGACCACTTTCAGAAACATTACCCAGCTCTCCTTCCAACTGACGCCGGAACCAATATTGGGGGATTACACAATCGTCATAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CAA 90 bp | TTCTCTGTCTCACCAGAAAGTGCCGAAGGAATGAATGATGGAGAGTaGTCTGTCTCGGGTTTCTCATCTCTCTCCCAGTATATCATATTA | + |
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Preference number: 6 (lower is better) Translates to: FSVSPESAEGMNDGE*SVSGFSSLSQYIIL Trigger: TAATATGATATACTGGGAGAGAGATGAGAAACCCGAGACAGACAACTCTCCATCATTCATTCCTTCGGCACTTTCTGGTGAGACAGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 72 bp | ACAGATCTTCTCTCAGAGATTTTAAGAGTGTTTCCCTaGACAAGTAATGCCACAAAGGCCAACTGCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: TDLLSEILRVFP*TSNATKANCSE Trigger: CTCAGAGCAGTTGGCCTTTGTGGCATTACTTGTTCAGGGAAACACTCTTAAAATCTCTGAGAGAAGATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS GCA 72 bp | ATGGTTAGTTTGTTCAATGGAGAAGGTGAGGCTGGTTaGTTCCTTGGGAACATTTTCCAAGTAGAACAGAAC | + |
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Preference number: 6 (lower is better) Translates to: MVSLFNGEGEAG*FLGNIFQVEQN Trigger: GTTCTGTTCTACTTGGAAAATGTTCCCAAGGAAGCAACCAGCCTCACCTTCTCCATTGAACAAACTAACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CAA 72 bp | GCCATAGGTGTACTTTGCACATGTAACCATTTGAAATaGACTGTCCGCAATGGTTATTGTCTCTGGTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: AIGVLCTCNHLK*TVRNGYCLWCS Trigger: ACTGCACCAGAGACAATAACCATTGCGGACAGTCAATTTCAAATGGTTACATGTGCAAAGTACACCTATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 72 bp | TCAAATTTGGGCAAAACGTCTCGGTTAACAGTGAAATaGTCCATCACTGTCGTTCCCGATTGTGTTTTTATG | + |
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Preference number: 6 (lower is better) Translates to: SNLGKTSRLTVK*SITVVPDCVFM Trigger: CATAAAAACACAATCGGGAACGACAGTGATGGATCATTTCACTGTTAACCGAGACGTTTTGCCCAAATTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS TCA 72 bp | TACTACATTGCTTGGCAATTCCAGAAGTGTTTGTTTTaGGGCTTTGGTACCTTTTGGACAGATGAGGAAACT | + |
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Preference number: 6 (lower is better) Translates to: YYIAWQFQKCLF*GFGTFWTDEET Trigger: AGTTTCCTCATCTGTCCAAAAGGTACCAAAGCCTCAAAACAAACACTTCTGGAATTGCCAAGCAATGTAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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| CDS CAA 72 bp | TCCCAGTATATCATATTATTTGTTTTTGTAGCAGATTaGTCCAGGATTGAGAGTAAGGATTTCGCTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SQYIILFVFVAD*SRIESKDFACC Trigger: ACAGCAAGCGAAATCCTTACTCTCAATCCTGGACAAATCTGCTACAAAAACAAATAATATGATATACTGGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060574.9 |
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