RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for A26C3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027157

Ensembl transcript IDs: ENSMUST00000028577.3, ENSMUST00000142636.8

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp ATCATTCTCTGTAGTCTCTCTGTATCACCGTCGCTTGCAGCCTGGTaGATCTTTCTGAGAGGTTTGTATCTCGGTTCATTTGGGACAGAA +
Preference number: 5 (lower is better)
Translates to: IILCSLSVSPSLAAW*IFLRGLYLGSFGTE
Trigger: TTCTGTCCCAAATGAACCGAGATACAAACCTCTCAGAAAGATCCACCAGGCTGCAAGCGACGGTGATACAGAGAGACTACAGAGAATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS CCA 90 bp CTTATCATTCTCTGTAGTCTCTCTGTATCACCGTCGCTTGCAGCCTaGTGGATCTTTCTGAGAGGTTTGTATCTCGGTTCATTTGGGACA +
Preference number: 5 (lower is better)
Translates to: LIILCSLSVSPSLAA*WIFLRGLYLGSFGT
Trigger: TGTCCCAAATGAACCGAGATACAAACCTCTCAGAAAGATCCACCAGGCTGCAAGCGACGGTGATACAGAGAGACTACAGAGAATGATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS GCA 90 bp GCACAGGCAAAATGCAGGGCAGTCCTTTCCTTAAAGTCTCTGTCATaGACACTGTGTTTCCCAAGACTTATCATTCTCTGTAGTCTCTCT +
Preference number: 5 (lower is better)
Translates to: AQAKCRAVLSLKSLS*TLCFPRLIILCSLS
Trigger: AGAGAGACTACAGAGAATGATAAGTCTTGGGAAACACAGTGTGCATGACAGAGACTTTAAGGAAAGGACTGCCCTGCATTTTGCCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS TCA 90 bp GCACCATGCTTCAATAATATGCACACACATTCATATGTCCAGTTTTaGACAGCCTTCATCAGAGGCGTGATGAAGTTCATGTCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: APCFNNMHTHSYVQF*TAFIRGVMKFMSAA
Trigger: CGCTGCTGACATGAACTTCATCACGCCTCTGATGAAGGCTGTTCAAAACTGGACATATGAATGTGTGTGCATATTATTGAAGCATGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS TCA 90 bp TGCACTGTACTTAAGCAAGCATTTGGCGAGTGTCTGGTTATCTTCTaGCACAGCGTAGTGAAGAGAAGTATTGCCATTTTTGTCCTTTCG +
Preference number: 5 (lower is better)
Translates to: CTVLKQAFGECLVIF*HSVVKRSIAIFVLS
Trigger: CGAAAGGACAAAAATGGCAATACTTCTCTTCACTACGCTGTGTCAGAAGATAACCAGACACTCGCCAAATGCTTGCTTAAGTACAGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS CCA 90 bp CATGCGATGAGTCCTCCTGATTTGTGTCTGATTCTTCTTGTGCAATaGAATATGTCTTTTCAGTGCTACACTGATGTTCATGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: HAMSPPDLCLILLVQ*NMSFQCYTDVHVFP
Trigger: AGGAAAAACATGAACATCAGTGTAGCACTGAAAAGACATATTCCATTGCACAAGAAGAATCAGACACAAATCAGGAGGACTCATCGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000142636.8
CDS TCA 90 bp CTTAGAAATATCCAGCTCATCATCAAACTTGCATGCATTCTCATTTaGTTTAGGAAAGGTAGATCCAGAAGTAGGGTTATTGGGATGCTT +
Preference number: 5 (lower is better)
Translates to: LRNIQLIIKLACILI*FRKGRSRSRVIGML
Trigger: AAGCATCCCAATAACCCTACTTCTGGATCTACCTTTCCTAAATCAAATGAGAATGCATGCAAGTTTGATGATGAGCTGGATATTTCTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS TCA 90 bp GTTTCCACCAGTGACTCAATTTCTAAGTCTGATTCTTTTATGAAATaGTGTGATTCTGTCATTGTTCCTACTTCATTCAGATTGGGCACT +
Preference number: 5 (lower is better)
Translates to: VSTSDSISKSDSFMK*CDSVIVPTSFRLGT
Trigger: AGTGCCCAATCTGAATGAAGTAGGAACAATGACAGAATCACATCATTTCATAAAAGAATCAGACTTAGAAATTGAGTCACTGGTGGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS CCA 72 bp CTCTGTAGTCTCTCTGTATCACCGTCGCTTGCAGCCTaGTGGATCTTTCTGAGAGGTTTGTATCTCGGTTCA +
Preference number: 6 (lower is better)
Translates to: LCSLSVSPSLAA*WIFLRGLYLGS
Trigger: TGAACCGAGATACAAACCTCTCAGAAAGATCCACCAGGCTGCAAGCGACGGTGATACAGAGAGACTACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS CCA 72 bp TGTAGTCTCTCTGTATCACCGTCGCTTGCAGCCTGGTaGATCTTTCTGAGAGGTTTGTATCTCGGTTCATTT +
Preference number: 6 (lower is better)
Translates to: CSLSVSPSLAAW*IFLRGLYLGSF
Trigger: AAATGAACCGAGATACAAACCTCTCAGAAAGATCCACCAGGCTGCAAGCGACGGTGATACAGAGAGACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS CAA 72 bp CCGTCGCTTGCAGCCTGGTGGATCTTTCTGAGAGGTTaGTATCTCGGTTCATTTGGGACAGAAATACTTTTC +
Preference number: 6 (lower is better)
Translates to: PSLAAWWIFLRG*YLGSFGTEILF
Trigger: GAAAAGTATTTCTGTCCCAAATGAACCGAGATACAAACCTCTCAGAAAGATCCACCAGGCTGCAAGCGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS CAA 90 bp TCTGTATCACCGTCGCTTGCAGCCTGGTGGATCTTTCTGAGAGGTTaGTATCTCGGTTCATTTGGGACAGAAATACTTTTCATATCACGT +
Preference number: 6 (lower is better)
Translates to: SVSPSLAAWWIFLRG*YLGSFGTEILFISR
Trigger: ACGTGATATGAAAAGTATTTCTGTCCCAAATGAACCGAGATACAAACCTCTCAGAAAGATCCACCAGGCTGCAAGCGACGGTGATACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS GCA 72 bp TGGTGTAAAGCCATCCTTGTTCTTTTGTTCCATGTTTaGACTGTACTTAAGCAAGCATTTGGCGAGTGTCTG +
Preference number: 6 (lower is better)
Translates to: WCKAILVLLFHV*TVLKQAFGECL
Trigger: CAGACACTCGCCAAATGCTTGCTTAAGTACAGTGCAAACATGGAACAAAAGAACAAGGATGGCTTTACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS TCA 72 bp CTTAAGCAAGCATTTGGCGAGTGTCTGGTTATCTTCTaGCACAGCGTAGTGAAGAGAAGTATTGCCATTTTT +
Preference number: 6 (lower is better)
Translates to: LKQAFGECLVIF*HSVVKRSIAIF
Trigger: AAAAATGGCAATACTTCTCTTCACTACGCTGTGTCAGAAGATAACCAGACACTCGCCAAATGCTTGCTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS CAA 72 bp TCCTTGAGAGCCAGTAAAAGTGGTGTAAAGCCATCCTaGTTCTTTTGTTCCATGTTTGCACTGTACTTAAGC +
Preference number: 6 (lower is better)
Translates to: SLRASKSGVKPS*FFCSMFALYLS
Trigger: GCTTAAGTACAGTGCAAACATGGAACAAAAGAACAAGGATGGCTTTACACCACTTTTACTGGCTCTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS GCA 72 bp TTGCCATTTTTGTCCTTTCGGTTTGGATCAGCACCATaGTTCAATAATATGCACACACATTCATATGTCCAG +
Preference number: 6 (lower is better)
Translates to: LPFLSFRFGSAP*FNNMHTHSYVQ
Trigger: CTGGACATATGAATGTGTGTGCATATTATTGAAGCATGGTGCTGATCCAAACCGAAAGGACAAAAATGGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS TCA 72 bp TTCAATAATATGCACACACATTCATATGTCCAGTTTTaGACAGCCTTCATCAGAGGCGTGATGAAGTTCATG +
Preference number: 6 (lower is better)
Translates to: FNNMHTHSYVQF*TAFIRGVMKFM
Trigger: CATGAACTTCATCACGCCTCTGATGAAGGCTGTTCAAAACTGGACATATGAATGTGTGTGCATATTATTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS TCA 72 bp TCTTGTGCAATGGAATATGTCTTTTCAGTGCTACACTaGTGTTCATGTTTTTCCTCAGGAGAGTCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: SCAMEYVFSVLH*CSCFSSGESFS
Trigger: AGAGAAAGACTCTCCTGAGGAAAAACATGAACATCAGTGTAGCACTGAAAAGACATATTCCATTGCACAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000142636.8
CDS TCA 72 bp AGTTCAAAAACTTGTTCTGCATGCGATGAGTCCTCCTaGTTTGTGTCTGATTCTTCTTGTGCAATGGAATAT +
Preference number: 6 (lower is better)
Translates to: SSKTCSACDESS*FVSDSSCAMEY
Trigger: ATATTCCATTGCACAAGAAGAATCAGACACAAATCAGGAGGACTCATCGCATGCAGAACAAGTTTTTGAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000142636.8
CDS GCA 72 bp CTGATTCTTCTTGTGCAATGGAATATGTCTTTTCAGTaGTACACTGATGTTCATGTTTTTCCTCAGGAGAGT +
Preference number: 6 (lower is better)
Translates to: LILLVQWNMSFQ*YTDVHVFPQES
Trigger: ACTCTCCTGAGGAAAAACATGAACATCAGTGTAGCACTGAAAAGACATATTCCATTGCACAAGAAGAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000142636.8
CDS TCA 72 bp ATCCAGCTCATCATCAAACTTGCATGCATTCTCATTTaGTTTAGGAAAGGTAGATCCAGAAGTAGGGTTATT +
Preference number: 6 (lower is better)
Translates to: IQLIIKLACILI*FRKGRSRSRVI
Trigger: AATAACCCTACTTCTGGATCTACCTTTCCTAAATCAAATGAGAATGCATGCAAGTTTGATGATGAGCTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS TCA 72 bp TTTCTTCATCCTTGCTTTCCGAATATGTATTTGGACTaGGGTCATTCATTTCATTGGCTATCTTCAGGTATG +
Preference number: 6 (lower is better)
Translates to: FLHPCFPNMYLD*GHSFHWLSSGM
Trigger: CATACCTGAAGATAGCCAATGAAATGAATGACCTCAGTCCAAATACATATTCGGAAAGCAAGGATGAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142636.8
CDS CAA 90 bp CACGTACCAAGAACATACTTAGAAATATCCAGCTCATCATCAAACTaGCATGCATTCTCATTTGATTTAGGAAAGGTAGATCCAGAAGTA +
Preference number: 6 (lower is better)
Translates to: HVPRTYLEISSSSSN*HAFSFDLGKVDPEV
Trigger: TACTTCTGGATCTACCTTTCCTAAATCAAATGAGAATGCATGCAAGTTTGATGATGAGCTGGATATTTCTAAGTATGTTCTTGGTACGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3
CDS TCA 72 bp CTTCCAGAGATTCAATTTCCAAATCTGATTCTATTATaGAATGAGCTGATTCCGCCATTTTTCCTGCTTTAC +
Preference number: 6 (lower is better)
Translates to: LPEIQFPNLILL*NELIPPFFLLY
Trigger: GTAAAGCAGGAAAAATGGCGGAATCAGCTCATTTCATAATAGAATCAGATTTGGAAATTGAATCTCTGGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028577.3
ENSMUST00000142636.8
CDS CAA 72 bp CTCAGTGGGAGACTTCAAGTTAGGATACATGCAGTCTaGAACTGTAGTTTTTCTATTTGTATCATTTTGACA +
Preference number: 6 (lower is better)
Translates to: LSGRLQVRIHAV*NCSFSICIILT
Trigger: TGTCAAAATGATACAAATAGAAAAACTACAGTTCAAGACTGCATGTATCCTAACTTGAAGTCTCCCACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028577.3
ENSMUST00000142636.8
CDS CAA 72 bp TCCGAATATGTATTTGGACTGAGGTCATTCATTTCATaGGCTATCTTCAGGTATGGATATTTCTTTGCAGAT +
Preference number: 6 (lower is better)
Translates to: SEYVFGLRSFIS*AIFRYGYFFAD
Trigger: ATCTGCAAAGAAATATCCATACCTGAAGATAGCCAATGAAATGAATGACCTCAGTCCAAATACATATTCGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142636.8
CDS CAA 72 bp GATATAGTTAGTTCTGAGGTTAATGTTTCTTCATCCTaGCTTTCCGAATATGTATTTGGACTGAGGTCATTC +
Preference number: 6 (lower is better)
Translates to: DIVSSEVNVSSS*LSEYVFGLRSF
Trigger: GAATGACCTCAGTCCAAATACATATTCGGAAAGCAAGGATGAAGAAACATTAACCTCAGAACTAACTATATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142636.8
CDS CAA 72 bp GTGTGTTTCTTCTCATGTCATCAAATACATGTATATTaGCCCCCATCTTTACTAAAAACTTTGCCATCTCTA +
Preference number: 6 (lower is better)
Translates to: VCFFSCHQIHVY*PPSLLKTLPSL
Trigger: TAGAGATGGCAAAGTTTTTAGTAAAGATGGGGGCAAATATACATGTATTTGATGACATGAGAAGAAACACAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000028577.3