Pregenerated sensors for A1CF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052595Ensembl transcript IDs: ENSMUST00000075838.8, ENSMUST00000224304.2, ENSMUST00000224400.2, ENSMUST00000224564.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GGTTGCAGGGACAGGAGGATGCTGACCTATGACAGGCGAACAGTGTaGAATGTCCAGACCAAAAGTGAGAAGGAATCTATAATGTTTCAG | + |
Preference number: 1 (lower is better) Translates to: GCRDRRMLTYDRRTV*NVQTKSEKESIMFQ Trigger: CTGAAACATTATAGATTCCTTCTCACTTTTGGTCTGGACATTCCACACTGTTCGCCTGTCATAGGTCAGCATCCTCCTGTCCCTGCAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR TCA 90 bp | TCTCAGGAAAGGCATTGCTTTGGGGGAAGGTATGACTTGTGGTCATaGGGGATCTGGCTAGAGGTTCGTATCTTCTACAGATCCTTCTAT | + |
Preference number: 1 (lower is better) Translates to: SQERHCFGGRYDLWS*GIWLEVRIFYRSFY Trigger: ATAGAAGGATCTGTAGAAGATACGAACCTCTAGCCAGATCCCTCATGACCACAAGTCATACCTTCCCCCAAAGCAATGCCTTTCCTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR TCA 90 bp | TCTTACAGAGCTTCCTGCTTTCCTCTGGTGTCTAAGTTCTGTGAATaGAGAAGCAGCTGCCAGCCAGTGACTAAGATGGGCATTTTACTG | + |
Preference number: 1 (lower is better) Translates to: SYRASCFPLVSKFCE*RSSCQPVTKMGILL Trigger: CAGTAAAATGCCCATCTTAGTCACTGGCTGGCAGCTGCTTCTTCATTCACAGAACTTAGACACCAGAGGAAAGCAGGAAGCTCTGTAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR CCA 90 bp | TCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTaGGAATCCTTGAGCAGGGAAAGGATTCTGAAGGAAAACAGTGGC | + |
Preference number: 1 (lower is better) Translates to: SSFTLELGTGMVSVI*ESLSRERILKENSG Trigger: GCCACTGTTTTCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR TCA 90 bp | TTGAGCAGGGAAAGGATTCTGAAGGAAAACAGTGGCTTAAAGAGTTaGATAAATACAGGGCTTGGATTTGTCTCAAGCATATCTGAAATA | + |
Preference number: 1 (lower is better) Translates to: LSRERILKENSGLKS*INTGLGFVSSISEI Trigger: TATTTCAGATATGCTTGAGACAAATCCAAGCCCTGTATTTATTCAACTCTTTAAGCCACTGTTTTCCTTCAGAATCCTTTCCCTGCTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR TCA 90 bp | TCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAATCCGGGACAGGAGGATGCTaGCCTATGACAGGCGAACAG | + |
Preference number: 2 (lower is better) Translates to: SSFTLELGTGMVSVIWESGTGGC*PMTGEQ Trigger: CTGTTCGCCTGTCATAGGTCAGCATCCTCCTGTCCC...GGATTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR GCA 90 bp | TCCACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGTCTCAGGAAAGGCATTaGTTTGGGGGAAGGTATGAC | + |
Preference number: 2 (lower is better) Translates to: STLYAMLKASYRASCFPLSQERH*FGGRYD Trigger: GTCATACCTTCCCCCAAAGCAATGCCTTTCCTGAGA...CAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR TCA 90 bp | TCTGTGATTTGGGAATCCTTGAGCAGGGAAAGGATTCTGAAGGAAAACAGTGGCCTTTGGGGGAAGGTATaGCTTGTGGTCATGAGGGAT | + |
Preference number: 2 (lower is better) Translates to: SVIWESLSRERILKENSGLWGKV*LVVMRD Trigger: ATCCCTCATGACCACAAGTCATACCTTCCCCCAAAG...GCCACTGTTTTCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATCACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR TCA 90 bp | ATACTCCACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTAAGTTCTGTGAATaGAGAAGCAGCTGCCAGCCA | + |
Preference number: 2 (lower is better) Translates to: ILHTVCNAEGLLQSFLLSSKFCE*RSSCQP Trigger: TGGCTGGCAGCTGCTTCTTCATTCACAGAACTTAGA...GGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR CCA 90 bp | GCTCAGCCTGGGATCATACTCCACACTGTATGCAATGCTGAAGGCCTCTTACAGGACACTCAGGATCCTTaGAAGAACAACTTTTGCTGT | + |
Preference number: 2 (lower is better) Translates to: AQPGIILHTVCNAEGLLQDTQDP*KNNFCC Trigger: ACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTGTC...CTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGAGTATGATCCCAGGCTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR CCA 90 bp | TATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGGTGTCTAAGAGATGGGCATTTTACTaGCTGTGCCTTACTACGGAC | + |
Preference number: 2 (lower is better) Translates to: YAMLKASYRASCFPLVSKRWAFY*LCLTTD Trigger: GTCCGTAGTAAGGCACAGCCAGTAAAATGCCCATCT...CTTAGACACCAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR CAA 90 bp | TTACTACGGACTGCCCAGCTCTCTGTACTAAGAGCATATGCTAATTaGTCAGGGTGTTATCCTCTTCCTGAGACACTCAGGATCCTTGGA | + |
Preference number: 2 (lower is better) Translates to: LLRTAQLSVLRAYAN*SGCYPLPETLRILG Trigger: TCCAAGGATCCTGAGTGTCTCAGGAAGAGGATAACACCCTGACAAATTAGCATATGCTCTTAGTACAGAGAGCTGGGCAGTCCGTAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR TCA 90 bp | AAGTCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAAGAGGATGCTGACCTATaGCAGGCGAACAGTGTGGAA | + |
Preference number: 2 (lower is better) Translates to: KSSFTLELGTGMVSVIWEEDADL*QANSVE Trigger: TTCCACACTGTTCGCCTGTCATAGGTCAGCATCCTC...TTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR CAA 90 bp | GTCCAGACCAAAAGTGAGAAGGAATCTATAATGTTTCAGACAGTTTaGCTGAGCTCAGCCTGGGATCATACTCCACACTGTATGCAATGC | + |
Preference number: 2 (lower is better) Translates to: VQTKSEKESIMFQTV*LSSAWDHTPHCMQC Trigger: GCATTGCATACAGTGTGGAGTATGATCCCAGGCTGAGCTCAGCAAAACTGTCTGAAACATTATAGATTCCTTCTCACTTTTGGTCTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR CAA 90 bp | GTCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTaGGGAATCCTTGAGCAGGGAAAGGATTCTGAAGGAAAACAGTGG | + |
Preference number: 2 (lower is better) Translates to: VIFHSRTWYWHGFCD*GILEQGKDSEGKQW Trigger: CCACTGTTTTCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR CCA 90 bp | AAGTCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAATTGCTGAGCTCAGCCTaGGATCATACTCCACACTGT | + |
Preference number: 2 (lower is better) Translates to: KSSFTLELGTGMVSVIWELLSSA*DHTPHC Trigger: ACAGTGTGGAGTATGATCCCAGGCTGAGCTCAGCAA...TTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR CCA 90 bp | TCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAATCCGACAGGCGAACAGTGTaGAATGTCCAGACCAAAAGT | + |
Preference number: 2 (lower is better) Translates to: SSFTLELGTGMVSVIWESDRRTV*NVQTKS Trigger: ACTTTTGGTCTGGACATTCCACACTGTTCGCCTGTC...GGATTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR CAA 90 bp | ACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAATCCTaGAGCAGGGAAAGGATTCTGAAGGAAAACAGTGGCTTAAAGAGT | + |
Preference number: 2 (lower is better) Translates to: TLELGTGMVSVIWES*SRERILKENSGLKS Trigger: ACTCTTTAAGCCACTGTTTTCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR TCA 90 bp | ATAGTTTCACTATCAAGGGACTCAGTCATAGTAAAGCCAGCTGCACATATTGAAGTGTTATCCTCTTCCTaGGACACTCAGGATCCTTGG | + |
Preference number: 2 (lower is better) Translates to: IVSLSRDSVIVKPAAHIEVLSSS*DTQDPW Trigger: CCAAGGATCCTGAGTGTCTCAGGAAGAGGATAACAC...TTCAATATGTGCAGCTGGCTTTACTATGACTGAGTCCCTTGATAGTGAAACTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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3UTR-3UTR TCA 90 bp | CAGTGGCTTAAAGAGTTGAATAAATACAGGGCTTGGATTTGTCTCAAGCATATCGTGTTATCCTCTTCCTaGGACACTCAGGATCCTTGG | + |
Preference number: 2 (lower is better) Translates to: QWLKELNKYRAWICLKHIVLSSS*DTQDPW Trigger: CCAAGGATCCTGAGTGTCTCAGGAAGAGGATAACAC...GATATGCTTGAGACAAATCCAAGCCCTGTATTTATTCAACTCTTTAAGCCACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR GCA 90 bp | TCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAATCCTGGAAGAACAACTTTTaGTGTCCGTGGATCTTCAGG | + |
Preference number: 2 (lower is better) Translates to: SSFTLELGTGMVSVIWESWKNNF*CPWIFR Trigger: CCTGAAGATCCACGGACAGCAAAAGTTGTTCTTCCA...GGATTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR TCA 90 bp | CAGTGGCTTAAAGAGTTGAATAAATACAGGGCTTGGATTTGTCTCAAGCATATCTCTAAGTTCTGTGAATaGAGAAGCAGCTGCCAGCCA | + |
Preference number: 2 (lower is better) Translates to: QWLKELNKYRAWICLKHISKFCE*RSSCQP Trigger: TGGCTGGCAGCTGCTTCTTCATTCACAGAACTTAGA...GATATGCTTGAGACAAATCCAAGCCCTGTATTTATTCAACTCTTTAAGCCACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR GCA 90 bp | ATAGTTTCACTATCAAGGGACTCAGTCATAGTAAAGCCAGCTGCACATATTGAATCTCAGGAAAGGCATTaGTTTGGGGGAAGGTATGAC | + |
Preference number: 2 (lower is better) Translates to: IVSLSRDSVIVKPAAHIESQERH*FGGRYD Trigger: GTCATACCTTCCCCCAAAGCAATGCCTTTCCTGAGA...TTCAATATGTGCAGCTGGCTTTACTATGACTGAGTCCCTTGATAGTGAAACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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3UTR-3UTR GCA 90 bp | AAGTCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAATCTTACAGAGCTTCCTaGTTTCCTCTGGTGTCTAAG | + |
Preference number: 2 (lower is better) Translates to: KSSFTLELGTGMVSVIWESYRAS*FPLVSK Trigger: CTTAGACACCAGAGGAAAGCAGGAAGCTCTGTAAGA...TTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR CCA 90 bp | TCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAATCCAACTTTTGCTGTCCGTaGATCTTCAGGTTTCTGCTT | + |
Preference number: 2 (lower is better) Translates to: SSFTLELGTGMVSVIWESNFCCP*IFRFLL Trigger: AAGCAGAAACCTGAAGATCCACGGACAGCAAAAGTT...GGATTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR CCA 90 bp | GATTTGGGAATCCTTGAGCAGGGAAAGGATTCTGAAGGAAAACAGTGGCTTAAAGACACTCAGGATCCTTaGAAGAACAACTTTTGCTGT | + |
Preference number: 2 (lower is better) Translates to: DLGILEQGKDSEGKQWLKDTQDP*KNNFCC Trigger: ACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTGTC...TTTAAGCCACTGTTTTCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR TCA 90 bp | TCCTTTTTACATGTATATAGCCTCCCTCCCCCAGTCACTATCAGATGGTCTAAAAAGCAACACTTTTACTaGATGCTAAAAGGGATGGTC | + |
Preference number: 2 (lower is better) Translates to: SFLHVYSLPPPVTIRWSKKQHFY*MLKGMV Trigger: GACCATCCCTTTTAGCATTCAGTAAAAGTGTTGCTT...TTTAGACCATCTGATAGTGACTGGGGGAGGGAGGCTATATACATGTAAAAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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3UTR-3UTR CCA 90 bp | TTGTCTCAAGCATATCTGAAATACATTGTACTGATTTCTAGAAAGTCCCCAGAGAGATGGGCATTTTACTaGCTGTGCCTTACTACGGAC | + |
Preference number: 2 (lower is better) Translates to: LSQAYLKYIVLISRKSPERWAFY*LCLTTD Trigger: GTCCGTAGTAAGGCACAGCCAGTAAAATGCCCATCT...CTCTGGGGACTTTCTAGAAATCAGTACAATGTATTTCAGATATGCTTGAGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR CCA 90 bp | ACATTACATCCTTTTTACATGTATATAGCCTCCCTCCCCCAGTCACTATCAGATCTTCCTGCTTTCCTCTaGTGTCTAAGTTCTGTGAAT | + |
Preference number: 2 (lower is better) Translates to: TLHPFYMYIASLPQSLSDLPAFL*CLSSVN Trigger: ATTCACAGAACTTAGACACCAGAGGAAAGCAGGAAG...ATCTGATAGTGACTGGGGGAGGGAGGCTATATACATGTAAAAAGGATGTAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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3UTR TCA 72 bp | CCCCAGAGGTTGCAGGGACAGGAGGATGCTGACCTATaGCAGGCGAACAGTGTGGAATGTCCAGACCAAAAG | + |
Preference number: 3 (lower is better) Translates to: PQRLQGQEDADL*QANSVECPDQK Trigger: CTTTTGGTCTGGACATTCCACACTGTTCGCCTGTCATAGGTCAGCATCCTCCTGTCCCTGCAACCTCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR TCA 72 bp | AGAAAGTCCCCAGAGGTTGCAGGGACAGGAGGATGCTaGCCTATGACAGGCGAACAGTGTGGAATGTCCAGA | + |
Preference number: 3 (lower is better) Translates to: RKSPEVAGTGGC*PMTGEQCGMSR Trigger: TCTGGACATTCCACACTGTTCGCCTGTCATAGGTCAGCATCCTCCTGTCCCTGCAACCTCTGGGGACTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR TCA 72 bp | GTGGTCTCAGGAAAGGCATTGCTTTGGGGGAAGGTATaGCTTGTGGTCATGAGGGATCTGGCTAGAGGTTCG | + |
Preference number: 3 (lower is better) Translates to: VVSGKALLWGKV*LVVMRDLARGS Trigger: CGAACCTCTAGCCAGATCCCTCATGACCACAAGTCATACCTTCCCCCAAAGCAATGCCTTTCCTGAGACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR TCA 72 bp | GCTTCCTGCTTTCCTCTGGTGTCTAAGTTCTGTGAATaGAGAAGCAGCTGCCAGCCAGTGACTAAGATGGGC | + |
Preference number: 3 (lower is better) Translates to: ASCFPLVSKFCE*RSSCQPVTKMG Trigger: GCCCATCTTAGTCACTGGCTGGCAGCTGCTTCTTCATTCACAGAACTTAGACACCAGAGGAAAGCAGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR TCA 72 bp | TCAGCCTGGGATCATACTCCACACTGTATGCAATGCTaGAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGG | + |
Preference number: 3 (lower is better) Translates to: SAWDHTPHCMQC*RPLTELPAFLW Trigger: CCAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGAGTATGATCCCAGGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR CAA 90 bp | GCTCAGCCTGGGATCATACTCCACACTGTATGCAATGCTGAAGGCCTCTTACAGAGACACTCAGGATCCTaGGAAGAACAACTTTTGCTG | + |
Preference number: 3 (lower is better) Translates to: AQPGIILHTVCNAEGLLQRHSGS*EEQLLL Trigger: CAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTGTCT...CTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGAGTATGATCCCAGGCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR-3UTR CAA 90 bp | GTTTCACTATCAAGGGACTCAGTCATAGTAAAGCCAGCTGCACATATTGAAAGAGAAAGTCCCCAGAGGTaGCAGGGACAGGAGGATGCT | + |
Preference number: 3 (lower is better) Translates to: VSLSRDSVIVKPAAHIERESPQR*QGQEDA Trigger: AGCATCCTCCTGTCCCTGCAACCTCTGGGGACTTTC...TCTTTCAATATGTGCAGCTGGCTTTACTATGACTGAGTCCCTTGATAGTGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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3UTR CCA 72 bp | GACAGGAGGATGCTGACCTATGACAGGCGAACAGTGTaGAATGTCCAGACCAAAAGTGAGAAGGAATCTATA | + |
Preference number: 3 (lower is better) Translates to: DRRMLTYDRRTV*NVQTKSEKESI Trigger: TATAGATTCCTTCTCACTTTTGGTCTGGACATTCCACACTGTTCGCCTGTCATAGGTCAGCATCCTCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR CCA 72 bp | ACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTaGGAATCCTTGAGCAGGGAAAGGATTCTGAAGGAA | + |
Preference number: 3 (lower is better) Translates to: TLELGTGMVSVI*ESLSRERILKE Trigger: TTCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR CCA 72 bp | CATGTATATAGCCTCCCTCCCCCAGTCACTATCAGATaGTCTAAATTGGGACATTTTGGAAAGCAACACTTT | + |
Preference number: 3 (lower is better) Translates to: HVYSLPPPVTIR*SKLGHFGKQHF Trigger: AAAGTGTTGCTTTCCAAAATGTCCCAATTTAGACCATCTGATAGTGACTGGGGGAGGGAGGCTATATACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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3UTR-3UTR CAA 90 bp | GAACTGGGTAGAGAACTCAAAGGTAACCTCAATTTTAATGCAACTTCTTGGAGACAGTGGCTTAAAGAGTaGAATAAATACAGGGCTTGG | + |
Preference number: 3 (lower is better) Translates to: ELGRELKGNLNFNATSWRQWLKE*NKYRAW Trigger: CCAAGCCCTGTATTTATTCAACTCTTTAAGCCACTG...TCTCCAAGAAGTTGCATTAAAATTGAGGTTACCTTTGAGTTCTCTACCCAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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3UTR TCA 72 bp | GAAAGGATTCTGAAGGAAAACAGTGGCTTAAAGAGTTaGATAAATACAGGGCTTGGATTTGTCTCAAGCATA | + |
Preference number: 3 (lower is better) Translates to: ERILKENSGLKS*INTGLGFVSSI Trigger: TATGCTTGAGACAAATCCAAGCCCTGTATTTATTCAACTCTTTAAGCCACTGTTTTCCTTCAGAATCCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR TCA 72 bp | TTTGTAGTTTTTGGGATCAGCAAAATGAGTCTGAGATaGAAGCAAATGAGTATGGACAAGCCAGAATTTCCT | + |
Preference number: 3 (lower is better) Translates to: FVVFGISKMSLR*KQMSMDKPEFP Trigger: AGGAAATTCTGGCTTGTCCATACTCATTTGCTTTCATCTCAGACTCATTTTGCTGATCCCAAAAACTACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | CTCTTCCTGAGACACTCAGGATCCTTGGAAGAACAACTTTTGCTGTCCGTGGATGACCAGTGCGCGGAGTaGCGCTTCCTTCTGGGTGCC | + |
Preference number: 4 (lower is better) Translates to: LFLRHSGSLEEQLLLSVDDQCAE*RFLLGA Trigger: GGCACCCAGAAGGAAGCGGCACTCCGCGCACTGGTC...ATCCACGGACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTGTCTCAGGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | CACTCAGGATCCTTGGAAGAACAACTTTTGCTGTCCGTGGATCTTCAGGTTTCTGCAGCATGGTGTTCCTaGCACCGGTGCCCCGGGTGT | + |
Preference number: 4 (lower is better) Translates to: HSGSLEEQLLLSVDLQVSAAWCS*HRCPGC Trigger: ACACCCGGGGCACCGGTGGCAGGAACACCATGCTGC...AGAAACCTGAAGATCCACGGACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | CACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGGTCTATATCCTGTGCGCTaGACCAGTGCGCGGAGTGCC | + |
Preference number: 4 (lower is better) Translates to: HTVCNAEGLLQSFLLSSGLYPVR*TSARSA Trigger: GGCACTCCGCGCACTGGTCCAGCGCACAGGATATAG...ACCAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR TCA 90 bp | GCTCAGCCTGGGATCATACTCCACACTGTATGCAATGCTGAAGGCCTCTTACAGCAGTATTCATCGGGGTaGGCTCCATCCCAGGCAGAA | + |
Preference number: 4 (lower is better) Translates to: AQPGIILHTVCNAEGLLQQYSSG*APSQAE Trigger: TTCTGCCTGGGATGGAGCTCACCCCGATGAATACTG...CTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGAGTATGATCCCAGGCTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | ATACGACGAATAAATCTTGTGGTCTCAGGAAAGGCATTGCTTTGGGGGAAGGTAGACCAGTGCGCGGAGTaGCGCTTCCTTCTGGGTGCC | + |
Preference number: 4 (lower is better) Translates to: IRRINLVVSGKALLWGKVDQCAE*RFLLGA Trigger: GGCACCCAGAAGGAAGCGGCACTCCGCGCACTGGTC...TACCTTCCCCCAAAGCAATGCCTTTCCTGAGACCACAAGATTTATTCGTCGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
||
CDS-3UTR CCA 90 bp | GCTCAGCCTGGGATCATACTCCACACTGTATGCAATGCTGAAGGCCTCTTACAGATTCTCCTTGCAGCATaGTGTTCCTGCCACCGGTGC | + |
Preference number: 4 (lower is better) Translates to: AQPGIILHTVCNAEGLLQILLAA*CSCHRC Trigger: GCACCGGTGGCAGGAACACCATGCTGCAAGGAGAAT...CTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGAGTATGATCCCAGGCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
||
CDS-3UTR TCA 90 bp | CACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGGTCAGTATTCATCGGGGTaGGCTCCATCCCAGGCAGAA | + |
Preference number: 4 (lower is better) Translates to: HTVCNAEGLLQSFLLSSGQYSSG*APSQAE Trigger: TTCTGCCTGGGATGGAGCTCACCCCGATGAATACTG...ACCAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
||
CDS-3UTR CCA 90 bp | CTCAGGAAAGGCATTGCTTTGGGGGAAGGTATGACTTGTGGTCATGAGGGATCTAGAATCCCAGCCTGGTaGAGGGCCACCATACTTCCT | + |
Preference number: 4 (lower is better) Translates to: LRKGIALGEGMTCGHEGSRIPAW*RATILP Trigger: AGGAAGTATGGTGGCCCTCCACCAGGCTGGGATTCT...AGATCCCTCATGACCACAAGTCATACCTTCCCCCAAAGCAATGCCTTTCCTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
||
CDS-3UTR CCA 90 bp | TCCACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGTGGATTGCAGGATTCTaGCTGGCCAGCGCTGGGATA | + |
Preference number: 4 (lower is better) Translates to: STLYAMLKASYRASCFPLWIAGF*LASAGI Trigger: TATCCCAGCGCTGGCCAGCCAGAATCCTGCAATCCA...CAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | CTCTTCCTGAGACACTCAGGATCCTTGGAAGAACAACTTTTGCTGTCCGTGGATATCCTGGGAACACAGTaGCAGAAGTGGCCGTGGGTG | + |
Preference number: 4 (lower is better) Translates to: LFLRHSGSLEEQLLLSVDILGTQ*QKWPWV Trigger: CACCCACGGCCACTTCTGCCACTGTGTTCCCAGGAT...ATCCACGGACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTGTCTCAGGAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
||
CDS-3UTR CCA 90 bp | CACTCAGGATCCTTGGAAGAACAACTTTTGCTGTCCGTGGATCTTCAGGTTTCTCAGGAGCGGTGGCACTaGGGACAGCATATCCTGGGA | + |
Preference number: 4 (lower is better) Translates to: HSGSLEEQLLLSVDLQVSQERWH*GQHILG Trigger: TCCCAGGATATGCTGTCCCCAGTGCCACCGCTCCTG...AGAAACCTGAAGATCCACGGACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
||
CDS-3UTR TCA 90 bp | TCCACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGCTCTCTTGTCTCCTTTaGCGTGGTATCCTCGACCCA | + |
Preference number: 4 (lower is better) Translates to: STLYAMLKASYRASCFPLLSCLL*RGILDP Trigger: TGGGTCGAGGATACCACGTCAAAGGAGACAAGAGAG...CAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | CACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGGTACTGTCCTTGTCCACTaGCTTGGCCAAGGTCACTTC | + |
Preference number: 4 (lower is better) Translates to: HTVCNAEGLLQSFLLSSGTVLVH*LGQGHF Trigger: GAAGTGACCTTGGCCAAGCCAGTGGACAAGGACAGT...ACCAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
||
CDS-3UTR CCA 90 bp | CACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGGTCTGGCTGGCCAGCGCTaGGATAGTTACTTTGTAGAG | + |
Preference number: 4 (lower is better) Translates to: HTVCNAEGLLQSFLLSSGLAGQR*DSYFVE Trigger: CTCTACAAAGTAACTATCCCAGCGCTGGCCAGCCAG...ACCAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | ATACTCCACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCACTGCTTGCTTGAGCTaGGCTGTAGACACAGGAGCG | + |
Preference number: 4 (lower is better) Translates to: ILHTVCNAEGLLQSFLLSTACLS*AVDTGA Trigger: CGCTCCTGTGTCTACAGCCCAGCTCAAGCAAGCAGT...GGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGAGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | ACATTACATCCTTTTTACATGTATATAGCCTCCCTCCCCCAGTCACTATCAGATCCGCTTCCTTCTGGGTaGCGCTCAATCCATCCCCGG | + |
Preference number: 4 (lower is better) Translates to: TLHPFYMYIASLPQSLSDPLPSG*RSIHPR Trigger: CCGGGGATGGATTGAGCGGCACCCAGAAGGAAGCGG...ATCTGATAGTGACTGGGGGAGGGAGGCTATATACATGTAAAAAGGATGTAATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR GCA 90 bp | ACCATGATGGGTGTAAGGCTTTCCTGGAATAGTTTCACTATCAAGGGACTCAGTCCAAGCTATATCCTGTaGGCTGGACCAGTGCGCGGA | + |
Preference number: 4 (lower is better) Translates to: TMMGVRLSWNSFTIKGLSPSYIL*AGPVRG Trigger: TCCGCGCACTGGTCCAGCGCACAGGATATAGCTTGG...ACTGAGTCCCTTGATAGTGAAACTATTCCAGGAAAGCCTTACACCCATCATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR GCA 90 bp | CACTCAGGATCCTTGGAAGAACAACTTTTGCTGTCCGTGGATCTTCAGGTTTCTCCTAGCCATGGCGGCTaGTCGGTGACTCTCATATTC | + |
Preference number: 4 (lower is better) Translates to: HSGSLEEQLLLSVDLQVSPSHGG*SVTLIF Trigger: GAATATGAGAGTCACCGAGCAGCCGCCATGGCTAGG...AGAAACCTGAAGATCCACGGACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | ATAGTTTCACTATCAAGGGACTCAGTCATAGTAAAGCCAGCTGCACATATTGAAGCAGCATGGTGTTCCTaGCACCGGTGCCCCGGGTGT | + |
Preference number: 4 (lower is better) Translates to: IVSLSRDSVIVKPAAHIEAAWCS*HRCPGC Trigger: ACACCCGGGGCACCGGTGGCAGGAACACCATGCTGC...TTCAATATGTGCAGCTGGCTTTACTATGACTGAGTCCCTTGATAGTGAAACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR GCA 90 bp | CTCAGGAAAGGCATTGCTTTGGGGGAAGGTATGACTTGTGGTCATGAGGGATCTTATGAAAGGGTGGATTaGAGGATTCTGGCTGGCCAG | + |
Preference number: 4 (lower is better) Translates to: LRKGIALGEGMTCGHEGSYERVD*RILAGQ Trigger: CTGGCCAGCCAGAATCCTGCAATCCACCCTTTCATA...AGATCCCTCATGACCACAAGTCATACCTTCCCCCAAAGCAATGCCTTTCCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGGTGTCTAAGTGTAGAATCCCAGCCTaGTGGAGGGCCACCATACTT | + |
Preference number: 4 (lower is better) Translates to: YAMLKASYRASCFPLVSKCRIPA*WRATIL Trigger: AAGTATGGTGGCCCTCCACCAGGCTGGGATTCTACA...CTTAGACACCAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGGTGTCTAAGGGCAATTGTCCACACTaGCACAGACTCCCAAGAGAC | + |
Preference number: 4 (lower is better) Translates to: YAMLKASYRASCFPLVSKGNCPH*HRLPRD Trigger: GTCTCTTGGGAGTCTGTGCCAGTGTGGACAATTGCC...CTTAGACACCAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TATCCTCTTCCTGAGACACTCAGGATCCTTGGAAGAACAACTTTTGCTGTCCGTCAACTGAATTCTTCCTaGCAGCAGCCTCCGCCTAGC | + |
Preference number: 4 (lower is better) Translates to: YPLPETLRILGRTTFAVRQLNSS*QQPPPS Trigger: GCTAGGCGGAGGCTGCTGCCAGGAAGAATTCAGTTG...ACGGACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTGTCTCAGGAAGAGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | CTCTTCCTGAGACACTCAGGATCCTTGGAAGAACAACTTTTGCTGTCCGTGGATGGGGACAGCATATCCTaGGAACACAGTGGCAGAAGT | + |
Preference number: 4 (lower is better) Translates to: LFLRHSGSLEEQLLLSVDGDSIS*EHSGRS Trigger: ACTTCTGCCACTGTGTTCCCAGGATATGCTGTCCCC...ATCCACGGACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTGTCTCAGGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | TCCACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGAACCATCCAGCACCTTaGCATTCAAAGCCTTCATGG | + |
Preference number: 4 (lower is better) Translates to: STLYAMLKASYRASCFPLNHPAP*HSKPSW Trigger: CCATGAAGGCTTTGAATGGCAAGGTGCTGGATGGTT...CAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | GAACTGGGTAGAGAACTCAAAGGTAACCTCAATTTTAATGCAACTTCTTGGAGAAGAAGTGGCCGTGGGTaGTGTAGTCCCAGCGTCCCC | + |
Preference number: 4 (lower is better) Translates to: ELGRELKGNLNFNATSWRRSGRG*CSPSVP Trigger: GGGGACGCTGGGACTACAGCACCCACGGCCACTTCT...TCTCCAAGAAGTTGCATTAAAATTGAGGTTACCTTTGAGTTCTCTACCCAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR GCA 90 bp | CAGTGGCTTAAAGAGTTGAATAAATACAGGGCTTGGATTTGTCTCAAGCATATCAGAAGTGGCCGTGGGTaGTGTAGTCCCAGCGTCCCC | + |
Preference number: 4 (lower is better) Translates to: QWLKELNKYRAWICLKHIRSGRG*CSPSVP Trigger: GGGGACGCTGGGACTACAGCACCCACGGCCACTTCT...GATATGCTTGAGACAAATCCAAGCCCTGTATTTATTCAACTCTTTAAGCCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | TATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGGTGTCTAAGTTGTCCAAGTGTCACTaGTTGCTTGAGCTGGGCTGT | + |
Preference number: 4 (lower is better) Translates to: YAMLKASYRASCFPLVSKLSKCH*LLELGC Trigger: ACAGCCCAGCTCAAGCAAGCAGTGACACTTGGACAA...CTTAGACACCAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | CACTCAGGATCCTTGGAAGAACAACTTTTGCTGTCCGTGGATCTTCAGGTTTCTTTGTCTCCTTTGACGTaGTATCCTCGACCCAGGCCT | + |
Preference number: 4 (lower is better) Translates to: HSGSLEEQLLLSVDLQVSLSPLT*YPRPRP Trigger: AGGCCTGGGTCGAGGATACCACGTCAAAGGAGACAA...AGAAACCTGAAGATCCACGGACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TCTGTGATTTGGGAATCCTTGAGCAGGGAAAGGATTCTGAAGGAAAACAGTGGCATGGCAGAATGCAGTTaGTACACTGGCTGTCCCCAG | + |
Preference number: 4 (lower is better) Translates to: SVIWESLSRERILKENSGMAECS*YTGCPQ Trigger: CTGGGGACAGCCAGTGTACCAACTGCATTCTGCCAT...GCCACTGTTTTCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAATCCATCCTGGGAACACAGTaGCAGAAGTGGCCGTGGGTG | + |
Preference number: 4 (lower is better) Translates to: SSFTLELGTGMVSVIWESILGTQ*QKWPWV Trigger: CACCCACGGCCACTTCTGCCACTGTGTTCCCAGGAT...GGATTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | AAGTCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAACCAAGCTATATCCTGTaGGCTGGACCAGTGCGCGGA | + |
Preference number: 4 (lower is better) Translates to: KSSFTLELGTGMVSVIWEPSYIL*AGPVRG Trigger: TCCGCGCACTGGTCCAGCGCACAGGATATAGCTTGG...TTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAAGCAGCATGGTGTTCCTaGCACCGGTGCCCCGGGTGT | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKAAWCS*HRCPGC Trigger: ACACCCGGGGCACCGGTGGCAGGAACACCATGCTGC...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR GCA 90 bp | TCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAATCCGCCTCGGGTGGTCAGTaGAAAAGTAGGGTAGACCTC | + |
Preference number: 4 (lower is better) Translates to: SSFTLELGTGMVSVIWESASGGQ*KSRVDL Trigger: GAGGTCTACCCTACTTTTGCACTGACCACCCGAGGC...GGATTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | CAGTGGCTTAAAGAGTTGAATAAATACAGGGCTTGGATTTGTCTCAAGCATATCCTATATCCTGTGCGCTaGACCAGTGCGCGGAGTGCC | + |
Preference number: 4 (lower is better) Translates to: QWLKELNKYRAWICLKHILYPVR*TSARSA Trigger: GGCACTCCGCGCACTGGTCCAGCGCACAGGATATAG...GATATGCTTGAGACAAATCCAAGCCCTGTATTTATTCAACTCTTTAAGCCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TCCTTTTTACATGTATATAGCCTCCCTCCCCCAGTCACTATCAGATGGTCTAAAAGAATCCCAGCCTGGTaGAGGGCCACCATACTTCCT | + |
Preference number: 4 (lower is better) Translates to: SFLHVYSLPPPVTIRWSKRIPAW*RATILP Trigger: AGGAAGTATGGTGGCCCTCCACCAGGCTGGGATTCT...TTTAGACCATCTGATAGTGACTGGGGGAGGGAGGCTATATACATGTAAAAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR CCA 90 bp | TGGGTAGAGAACTCAAAGGTAACCTCAATTTTAATGCAACTTCTTGGAGATGAGCTCGCAGCCCCTTTCTaGGGGTGTAGAATCCCAGCC | + |
Preference number: 4 (lower is better) Translates to: WVENSKVTSILMQLLGDELAAPF*GCRIPA Trigger: GGCTGGGATTCTACACCCCCAGAAAGGGGCTGCGAG...CTCATCTCCAAGAAGTTGCATTAAAATTGAGGTTACCTTTGAGTTCTCTACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR CCA 90 bp | TCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAATCCCAACTGAATTCTTCCTaGCAGCAGCCTCCGCCTAGC | + |
Preference number: 4 (lower is better) Translates to: SSFTLELGTGMVSVIWESQLNSS*QQPPPS Trigger: GCTAGGCGGAGGCTGCTGCCAGGAAGAATTCAGTTG...GGATTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGGTGTCTAAGCAAGGTCACTTCTATTaGGGAACCATCCAGCACCTT | + |
Preference number: 4 (lower is better) Translates to: YAMLKASYRASCFPLVSKQGHFY*GTIQHL Trigger: AAGGTGCTGGATGGTTCCCCAATAGAAGTGACCTTG...CTTAGACACCAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | GATTTGGGAATCCTTGAGCAGGGAAAGGATTCTGAAGGAAAACAGTGGCTTAAATGGATTGCAGGATTCTaGCTGGCCAGCGCTGGGATA | + |
Preference number: 4 (lower is better) Translates to: DLGILEQGKDSEGKQWLKWIAGF*LASAGI Trigger: TATCCCAGCGCTGGCCAGCCAGAATCCTGCAATCCA...TTTAAGCCACTGTTTTCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | GATTTGTCTCAAGCATATCTGAAATACATTGTACTGATTTCTAGAAAGTCCCCACCGCTTCCTTCTGGGTaGCGCTCAATCCATCCCCGG | + |
Preference number: 4 (lower is better) Translates to: DLSQAYLKYIVLISRKSPPLPSG*RSIHPR Trigger: CCGGGGATGGATTGAGCGGCACCCAGAAGGAAGCGG...TGGGGACTTTCTAGAAATCAGTACAATGTATTTCAGATATGCTTGAGACAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAACCGCTTCCTTCTGGGTaGCGCTCAATCCATCCCCGG | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKPLPSG*RSIHPR Trigger: CCGGGGATGGATTGAGCGGCACCCAGAAGGAAGCGG...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR GCA 90 bp | TATCCTCTTCCTGAGACACTCAGGATCCTTGGAAGAACAACTTTTGCTGTCCGTAACCATCCAGCACCTTaGCATTCAAAGCCTTCATGG | + |
Preference number: 4 (lower is better) Translates to: YPLPETLRILGRTTFAVRNHPAP*HSKPSW Trigger: CCATGAAGGCTTTGAATGGCAAGGTGCTGGATGGTT...ACGGACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTGTCTCAGGAAGAGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | GTTTCACTATCAAGGGACTCAGTCATAGTAAAGCCAGCTGCACATATTGAAAGAGCCTCGGGTGGTCAGTaGAAAAGTAGGGTAGACCTC | + |
Preference number: 4 (lower is better) Translates to: VSLSRDSVIVKPAAHIERASGGQ*KSRVDL Trigger: GAGGTCTACCCTACTTTTGCACTGACCACCCGAGGC...TCTTTCAATATGTGCAGCTGGCTTTACTATGACTGAGTCCCTTGATAGTGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR CCA 90 bp | TTGTCTCAAGCATATCTGAAATACATTGTACTGATTTCTAGAAAGTCCCCAGAGCTCGCAGCCCCTTTCTaGGGGTGTAGAATCCCAGCC | + |
Preference number: 4 (lower is better) Translates to: LSQAYLKYIVLISRKSPELAAPF*GCRIPA Trigger: GGCTGGGATTCTACACCCCCAGAAAGGGGCTGCGAG...CTCTGGGGACTTTCTAGAAATCAGTACAATGTATTTCAGATATGCTTGAGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGGTGTCTAAGCCCTCTTTTTGGTTTTaGGGATTCCTCCCACAAACA | + |
Preference number: 4 (lower is better) Translates to: YAMLKASYRASCFPLVSKPSFWF*GFLPQT Trigger: TGTTTGTGGGAGGAATCCCCAAAACCAAAAAGAGGG...CTTAGACACCAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | ACATTACATCCTTTTTACATGTATATAGCCTCCCTCCCCCAGTCACTATCAGATATTCTCCTTGCAGCATaGTGTTCCTGCCACCGGTGC | + |
Preference number: 4 (lower is better) Translates to: TLHPFYMYIASLPQSLSDILLAA*CSCHRC Trigger: GCACCGGTGGCAGGAACACCATGCTGCAAGGAGAAT...ATCTGATAGTGACTGGGGGAGGGAGGCTATATACATGTAAAAAGGATGTAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR CCA 90 bp | TATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGGTGTCTAAGTGGGAAATGAAGACTTaGAATGGCTGCATAGGCTTG | + |
Preference number: 4 (lower is better) Translates to: YAMLKASYRASCFPLVSKWEMKT*NGCIGL Trigger: CAAGCCTATGCAGCCATTCCAAGTCTTCATTTCCCA...CTTAGACACCAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
||
CDS-3UTR CCA 90 bp | TCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAATCCATGGCAGAATGCAGTTaGTACACTGGCTGTCCCCAG | + |
Preference number: 4 (lower is better) Translates to: SSFTLELGTGMVSVIWESMAECS*YTGCPQ Trigger: CTGGGGACAGCCAGTGTACCAACTGCATTCTGCCAT...GGATTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TTGTCTCAAGCATATCTGAAATACATTGTACTGATTTCTAGAAAGTCCCCAGAGCAGGAGCGGTGGCACTaGGGACAGCATATCCTGGGA | + |
Preference number: 4 (lower is better) Translates to: LSQAYLKYIVLISRKSPEQERWH*GQHILG Trigger: TCCCAGGATATGCTGTCCCCAGTGCCACCGCTCCTG...CTCTGGGGACTTTCTAGAAATCAGTACAATGTATTTCAGATATGCTTGAGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR CAA 72 bp | ACTGCCCAGCTCTCTGTACTAAGAGCATATGCTAATTaGTCAGGGTGTTATCCTCTTCCTGAGACACTCAGG | + |
Preference number: 4 (lower is better) Translates to: TAQLSVLRAYAN*SGCYPLPETLR Trigger: CCTGAGTGTCTCAGGAAGAGGATAACACCCTGACAAATTAGCATATGCTCTTAGTACAGAGAGCTGGGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR CAA 72 bp | CTTGGTACTGGCATGGTTTCTGTGATTTGGGAATCCTaGAGCAGGGAAAGGATTCTGAAGGAAAACAGTGGC | + |
Preference number: 4 (lower is better) Translates to: LGTGMVSVIWES*SRERILKENSG Trigger: GCCACTGTTTTCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATCACAGAAACCATGCCAGTACCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR TCA 90 bp | CTCAGGAAAGGCATTGCTTTGGGGGAAGGTATGACTTGTGGTCATGAGGGATCTTTTCACACAATGGTATaGGTTCATCCTCAAAGAGGT | + |
Preference number: 4 (lower is better) Translates to: LRKGIALGEGMTCGHEGSFHTMV*VHPQRG Trigger: ACCTCTTTGAGGATGAACTCATACCATTGTGTGAAA...AGATCCCTCATGACCACAAGTCATACCTTCCCCCAAAGCAATGCCTTTCCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | TCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAATCCTTGTCCAAGTGTCACTaGTTGCTTGAGCTGGGCTGT | + |
Preference number: 4 (lower is better) Translates to: SSFTLELGTGMVSVIWESLSKCH*LLELGC Trigger: ACAGCCCAGCTCAAGCAAGCAGTGACACTTGGACAA...GGATTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAACTATATCCTGTGCGCTaGACCAGTGCGCGGAGTGCC | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKLYPVR*TSARSA Trigger: GGCACTCCGCGCACTGGTCCAGCGCACAGGATATAG...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CCA 90 bp | AAGTCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAATGTAGAATCCCAGCCTaGTGGAGGGCCACCATACTT | + |
Preference number: 4 (lower is better) Translates to: KSSFTLELGTGMVSVIWECRIPA*WRATIL Trigger: AAGTATGGTGGCCCTCCACCAGGCTGGGATTCTACA...TTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAACTCGCAGCCCCTTTCTaGGGGTGTAGAATCCCAGCC | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKLAAPF*GCRIPA Trigger: GGCTGGGATTCTACACCCCCAGAAAGGGGCTGCGAG...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CCA 90 bp | TCCACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGTTTATCAGCAGCACTTaGGTAGACAATGACATCAAC | + |
Preference number: 4 (lower is better) Translates to: STLYAMLKASYRASCFPLFISST*VDNDIN Trigger: GTTGATGTCATTGTCTACCCAAGTGCTGCTGATAAA...CAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | GAACTGGGTAGAGAACTCAAAGGTAACCTCAATTTTAATGCAACTTCTTGGAGAACTGCTTGCTTGAGCTaGGCTGTAGACACAGGAGCG | + |
Preference number: 4 (lower is better) Translates to: ELGRELKGNLNFNATSWRTACLS*AVDTGA Trigger: CGCTCCTGTGTCTACAGCCCAGCTCAAGCAAGCAGT...TCTCCAAGAAGTTGCATTAAAATTGAGGTTACCTTTGAGTTCTCTACCCAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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3UTR CAA 72 bp | ACGAATAAATCTTGTGGTCTCAGGAAAGGCATTGCTTaGGGGGAAGGTATGACTTGTGGTCATGAGGGATCT | + |
Preference number: 4 (lower is better) Translates to: TNKSCGLRKGIA*GEGMTCGHEGS Trigger: AGATCCCTCATGACCACAAGTCATACCTTCCCCCAAAGCAATGCCTTTCCTGAGACCACAAGATTTATTCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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3UTR CAA 72 bp | CACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTaGGGAATCCTTGAGCAGGGAAAGGATTCTGAAGGA | + |
Preference number: 4 (lower is better) Translates to: HSRTWYWHGFCD*GILEQGKDSEG Trigger: TCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAACCAAGCTATATCCTGTaGGCTGGACCAGTGCGCGGA | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKPSYIL*AGPVRG Trigger: TCCGCGCACTGGTCCAGCGCACAGGATATAGCTTGG...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR GCA 90 bp | AGTAATACGACGAATAAATCTTGTGGTCTCAGGAAAGGCATTGCTTTGGGGGAATTCTGCCCAGTCTACTaGAATAGGATGTCCCCACAA | + |
Preference number: 4 (lower is better) Translates to: SNTTNKSCGLRKGIALGEFCPVY*NRMSPQ Trigger: TTGTGGGGACATCCTATTGCAGTAGACTGGGCAGAA...TTCCCCCAAAGCAATGCCTTTCCTGAGACCACAAGATTTATTCGTCGTATTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | GATTTGGGAATCCTTGAGCAGGGAAAGGATTCTGAAGGAAAACAGTGGCTTAAATTCTGCCCAGTCTACTaGAATAGGATGTCCCCACAA | + |
Preference number: 4 (lower is better) Translates to: DLGILEQGKDSEGKQWLKFCPVY*NRMSPQ Trigger: TTGTGGGGACATCCTATTGCAGTAGACTGGGCAGAA...TTTAAGCCACTGTTTTCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TCTGTGATTTGGGAATCCTTGAGCAGGGAAAGGATTCTGAAGGAAAACAGTGGCCTTTGTCCATTTTCCTaGACCAAGCTATATCCTGTG | + |
Preference number: 4 (lower is better) Translates to: SVIWESLSRERILKENSGLCPFS*TKLYPV Trigger: CACAGGATATAGCTTGGTCCAGGAAAATGGACAAAG...GCCACTGTTTTCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATCACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | CTCTTCCTGAGACACTCAGGATCCTTGGAAGAACAACTTTTGCTGTCCGTGGATTTTATCAGCAGCACTTaGGTAGACAATGACATCAAC | + |
Preference number: 4 (lower is better) Translates to: LFLRHSGSLEEQLLLSVDFISST*VDNDIN Trigger: GTTGATGTCATTGTCTACCCAAGTGCTGCTGATAAA...ATCCACGGACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTGTCTCAGGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TCCACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGTCTTTCCACAGCACCTaGTTTAATACTGTTGAATTC | + |
Preference number: 4 (lower is better) Translates to: STLYAMLKASYRASCFPLSFHST*FNTVEF Trigger: GAATTCAACAGTATTAAACCAGGTGCTGTGGAAAGA...CAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | GATTTGGGAATCCTTGAGCAGGGAAAGGATTCTGAAGGAAAACAGTGGCTTAAACAAGGTCACTTCTATTaGGGAACCATCCAGCACCTT | + |
Preference number: 4 (lower is better) Translates to: DLGILEQGKDSEGKQWLKQGHFY*GTIQHL Trigger: AAGGTGCTGGATGGTTCCCCAATAGAAGTGACCTTG...TTTAAGCCACTGTTTTCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | CAGTGGCTTAAAGAGTTGAATAAATACAGGGCTTGGATTTGTCTCAAGCATATCACTGTCCTTGTCCACTaGCTTGGCCAAGGTCACTTC | + |
Preference number: 4 (lower is better) Translates to: QWLKELNKYRAWICLKHITVLVH*LGQGHF Trigger: GAAGTGACCTTGGCCAAGCCAGTGGACAAGGACAGT...GATATGCTTGAGACAAATCCAAGCCCTGTATTTATTCAACTCTTTAAGCCACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | GAACTGGGTAGAGAACTCAAAGGTAACCTCAATTTTAATGCAACTTCTTGGAGACTGGCTGGCCAGCGCTaGGATAGTTACTTTGTAGAG | + |
Preference number: 4 (lower is better) Translates to: ELGRELKGNLNFNATSWRLAGQR*DSYFVE Trigger: CTCTACAAAGTAACTATCCCAGCGCTGGCCAGCCAG...TCTCCAAGAAGTTGCATTAAAATTGAGGTTACCTTTGAGTTCTCTACCCAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR GCA 90 bp | CTCTTCCTGAGACACTCAGGATCCTTGGAAGAACAACTTTTGCTGTCCGTGGATATTAAGTTGCTTGATTaGATTCTTGGCTTCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: LFLRHSGSLEEQLLLSVDIKLLD*ILGFLL Trigger: AAGCAGGAAGCCAAGAATGCAATCAAGCAACTTAAT...ATCCACGGACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTGTCTCAGGAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAACCTAGCCATGGCGGCTaGTCGGTGACTCTCATATTC | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKPSHGG*SVTLIF Trigger: GAATATGAGAGTCACCGAGCAGCCGCCATGGCTAGG...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR GCA 90 bp | ACATTACATCCTTTTTACATGTATATAGCCTCCCTCCCCCAGTCACTATCAGATTGTCCAATGGCAGAATaGAGTTGGTACACTGGCTGT | + |
Preference number: 4 (lower is better) Translates to: TLHPFYMYIASLPQSLSDCPMAE*SWYTGC Trigger: ACAGCCAGTGTACCAACTGCATTCTGCCATTGGACA...ATCTGATAGTGACTGGGGGAGGGAGGCTATATACATGTAAAAAGGATGTAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR GCA 90 bp | CAGTGGCTTAAAGAGTTGAATAAATACAGGGCTTGGATTTGTCTCAAGCATATCTATGAAAGGGTGGATTaGAGGATTCTGGCTGGCCAG | + |
Preference number: 4 (lower is better) Translates to: QWLKELNKYRAWICLKHIYERVD*RILAGQ Trigger: CTGGCCAGCCAGAATCCTGCAATCCACCCTTTCATA...GATATGCTTGAGACAAATCCAAGCCCTGTATTTATTCAACTCTTTAAGCCACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAAAGAATCCCAGCCTGGTaGAGGGCCACCATACTTCCT | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKRIPAW*RATILP Trigger: AGGAAGTATGGTGGCCCTCCACCAGGCTGGGATTCT...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CCA 90 bp | TCTGAAGGAAAACAGTGGCTTAAAGAGTTGAATAAATACAGGGCTTGGATTTGTGGCAATTGTCCACACTaGCACAGACTCCCAAGAGAC | + |
Preference number: 4 (lower is better) Translates to: SEGKQWLKELNKYRAWICGNCPH*HRLPRD Trigger: GTCTCTTGGGAGTCTGTGCCAGTGTGGACAATTGCC...ACAAATCCAAGCCCTGTATTTATTCAACTCTTTAAGCCACTGTTTTCCTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAACAACTGAATTCTTCCTaGCAGCAGCCTCCGCCTAGC | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKQLNSS*QQPPPS Trigger: GCTAGGCGGAGGCTGCTGCCAGGAAGAATTCAGTTG...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CCA 90 bp | CAGTGGCTTAAAGAGTTGAATAAATACAGGGCTTGGATTTGTCTCAAGCATATCCCTTGTCCACTGGCTTaGCCAAGGTCACTTCTATTG | + |
Preference number: 4 (lower is better) Translates to: QWLKELNKYRAWICLKHIPCPLA*PRSLLL Trigger: CAATAGAAGTGACCTTGGCCAAGCCAGTGGACAAGG...GATATGCTTGAGACAAATCCAAGCCCTGTATTTATTCAACTCTTTAAGCCACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAAATTCTCCTTGCAGCATaGTGTTCCTGCCACCGGTGC | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKILLAA*CSCHRC Trigger: GCACCGGTGGCAGGAACACCATGCTGCAAGGAGAAT...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CCA 90 bp | AGTAATACGACGAATAAATCTTGTGGTCTCAGGAAAGGCATTGCTTTGGGGGAATGGGAAATGAAGACTTaGAATGGCTGCATAGGCTTG | + |
Preference number: 4 (lower is better) Translates to: SNTTNKSCGLRKGIALGEWEMKT*NGCIGL Trigger: CAAGCCTATGCAGCCATTCCAAGTCTTCATTTCCCA...TTCCCCCAAAGCAATGCCTTTCCTGAGACCACAAGATTTATTCGTCGTATTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | CTCTTCCTGAGACACTCAGGATCCTTGGAAGAACAACTTTTGCTGTCCGTGGATATGTCCTTTAGTAGCTaGGAAATGAAGACTTGGAAT | + |
Preference number: 4 (lower is better) Translates to: LFLRHSGSLEEQLLLSVDMSFSS*EMKTWN Trigger: ATTCCAAGTCTTCATTTCCCAGCTACTAAAGGACAT...ATCCACGGACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTGTCTCAGGAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TTGTCTCAAGCATATCTGAAATACATTGTACTGATTTCTAGAAAGTCCCCAGAGGGGGACAGCATATCCTaGGAACACAGTGGCAGAAGT | + |
Preference number: 4 (lower is better) Translates to: LSQAYLKYIVLISRKSPEGDSIS*EHSGRS Trigger: ACTTCTGCCACTGTGTTCCCAGGATATGCTGTCCCC...CTCTGGGGACTTTCTAGAAATCAGTACAATGTATTTCAGATATGCTTGAGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR TCA 90 bp | ACCATGATGGGTGTAAGGCTTTCCTGGAATAGTTTCACTATCAAGGGACTCAGTTTTCACACAATGGTATaGGTTCATCCTCAAAGAGGT | + |
Preference number: 4 (lower is better) Translates to: TMMGVRLSWNSFTIKGLSFHTMV*VHPQRG Trigger: ACCTCTTTGAGGATGAACTCATACCATTGTGTGAAA...ACTGAGTCCCTTGATAGTGAAACTATTCCAGGAAAGCCTTACACCCATCATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR GCA 90 bp | TATCCTCTTCCTGAGACACTCAGGATCCTTGGAAGAACAACTTTTGCTGTCCGTATTAAGTTGCTTGATTaGATTCTTGGCTTCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: YPLPETLRILGRTTFAVRIKLLD*ILGFLL Trigger: AAGCAGGAAGCCAAGAATGCAATCAAGCAACTTAAT...ACGGACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTGTCTCAGGAAGAGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | AGTAATACGACGAATAAATCTTGTGGTCTCAGGAAAGGCATTGCTTTGGGGGAACTTTGTCCATTTTCCTaGACCAAGCTATATCCTGTG | + |
Preference number: 4 (lower is better) Translates to: SNTTNKSCGLRKGIALGELCPFS*TKLYPV Trigger: CACAGGATATAGCTTGGTCCAGGAAAATGGACAAAG...TTCCCCCAAAGCAATGCCTTTCCTGAGACCACAAGATTTATTCGTCGTATTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAATGTAGAATCCCAGCCTaGTGGAGGGCCACCATACTT | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKCRIPA*WRATIL Trigger: AAGTATGGTGGCCCTCCACCAGGCTGGGATTCTACA...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAAGGCAATTGTCCACACTaGCACAGACTCCCAAGAGAC | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKGNCPH*HRLPRD Trigger: GTCTCTTGGGAGTCTGTGCCAGTGTGGACAATTGCC...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CCA 90 bp | GTTTCACTATCAAGGGACTCAGTCATAGTAAAGCCAGCTGCACATATTGAAAGACCCTCTTTTTGGTTTTaGGGATTCCTCCCACAAACA | + |
Preference number: 4 (lower is better) Translates to: VSLSRDSVIVKPAAHIERPSFWF*GFLPQT Trigger: TGTTTGTGGGAGGAATCCCCAAAACCAAAAAGAGGG...TCTTTCAATATGTGCAGCTGGCTTTACTATGACTGAGTCCCTTGATAGTGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAAACTGTCCTTGTCCACTaGCTTGGCCAAGGTCACTTC | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKTVLVH*LGQGHF Trigger: GAAGTGACCTTGGCCAAGCCAGTGGACAAGGACAGT...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CCA 90 bp | GATTTGTCTCAAGCATATCTGAAATACATTGTACTGATTTCTAGAAAGTCCCCATTGTCTCCTTTGACGTaGTATCCTCGACCCAGGCCT | + |
Preference number: 4 (lower is better) Translates to: DLSQAYLKYIVLISRKSPLSPLT*YPRPRP Trigger: AGGCCTGGGTCGAGGATACCACGTCAAAGGAGACAA...TGGGGACTTTCTAGAAATCAGTACAATGTATTTCAGATATGCTTGAGACAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | GATTTGGGAATCCTTGAGCAGGGAAAGGATTCTGAAGGAAAACAGTGGCTTAAAATGCAGTTGGTACACTaGCTGTCCCCAGTTATTTTT | + |
Preference number: 4 (lower is better) Translates to: DLGILEQGKDSEGKQWLKMQLVH*LSPVIF Trigger: AAAAATAACTGGGGACAGCCAGTGTACCAACTGCAT...TTTAAGCCACTGTTTTCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | ATACGACGAATAAATCTTGTGGTCTCAGGAAAGGCATTGCTTTGGGGGAAGGTATCTTTCCACAGCACCTaGTTTAATACTGTTGAATTC | + |
Preference number: 4 (lower is better) Translates to: IRRINLVVSGKALLWGKVSFHST*FNTVEF Trigger: GAATTCAACAGTATTAAACCAGGTGCTGTGGAAAGA...TACCTTCCCCCAAAGCAATGCCTTTCCTGAGACCACAAGATTTATTCGTCGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | ACATTACATCCTTTTTACATGTATATAGCCTCCCTCCCCCAGTCACTATCAGATCATTCAAAGCCTTCATaGCTTCAACTGCATCTTCTC | + |
Preference number: 4 (lower is better) Translates to: TLHPFYMYIASLPQSLSDHSKPS*LQLHLL Trigger: GAGAAGATGCAGTTGAAGCCATGAAGGCTTTGAATG...ATCTGATAGTGACTGGGGGAGGGAGGCTATATACATGTAAAAAGGATGTAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR CCA 90 bp | AAGTCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAACATTCAAAGCCTTCATaGCTTCAACTGCATCTTCTC | + |
Preference number: 4 (lower is better) Translates to: KSSFTLELGTGMVSVIWEHSKPS*LQLHLL Trigger: GAGAAGATGCAGTTGAAGCCATGAAGGCTTTGAATG...TTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
||
CDS-3UTR CCA 90 bp | GATTTGTCTCAAGCATATCTGAAATACATTGTACTGATTTCTAGAAAGTCCCCACCTTGTCCACTGGCTTaGCCAAGGTCACTTCTATTG | + |
Preference number: 4 (lower is better) Translates to: DLSQAYLKYIVLISRKSPPCPLA*PRSLLL Trigger: CAATAGAAGTGACCTTGGCCAAGCCAGTGGACAAGG...TGGGGACTTTCTAGAAATCAGTACAATGTATTTCAGATATGCTTGAGACAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
||
CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAACCTTGTCCACTGGCTTaGCCAAGGTCACTTCTATTG | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKPCPLA*PRSLLL Trigger: CAATAGAAGTGACCTTGGCCAAGCCAGTGGACAAGG...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
||
CDS-3UTR GCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAATTCTGCCCAGTCTACTaGAATAGGATGTCCCCACAA | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKFCPVY*NRMSPQ Trigger: TTGTGGGGACATCCTATTGCAGTAGACTGGGCAGAA...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
||
CDS-3UTR GCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAAAACCATCCAGCACCTTaGCATTCAAAGCCTTCATGG | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKNHPAP*HSKPSW Trigger: CCATGAAGGCTTTGAATGGCAAGGTGCTGGATGGTT...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
||
CDS-3UTR GCA 90 bp | GATTTGTCTCAAGCATATCTGAAATACATTGTACTGATTTCTAGAAAGTCCCCATGTCCAATGGCAGAATaGAGTTGGTACACTGGCTGT | + |
Preference number: 4 (lower is better) Translates to: DLSQAYLKYIVLISRKSPCPMAE*SWYTGC Trigger: ACAGCCAGTGTACCAACTGCATTCTGCCATTGGACA...TGGGGACTTTCTAGAAATCAGTACAATGTATTTCAGATATGCTTGAGACAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAACAAGGTCACTTCTATTaGGGAACCATCCAGCACCTT | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKQGHFY*GTIQHL Trigger: AAGGTGCTGGATGGTTCCCCAATAGAAGTGACCTTG...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR TCA 90 bp | AAGTCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAAGGCTTCCTGCTTATTTaGGAATGTTACAAATGCATA | + |
Preference number: 4 (lower is better) Translates to: KSSFTLELGTGMVSVIWEGFLLI*ECYKCI Trigger: TATGCATTTGTAACATTCTCAAATAAGCAGGAAGCC...TTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAACCCTCTTTTTGGTTTTaGGGATTCCTCCCACAAACA | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKPSFWF*GFLPQT Trigger: TGTTTGTGGGAGGAATCCCCAAAACCAAAAAGAGGG...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAATGGGAAATGAAGACTTaGAATGGCTGCATAGGCTTG | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKWEMKT*NGCIGL Trigger: CAAGCCTATGCAGCCATTCCAAGTCTTCATTTCCCA...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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3UTR CAA 72 bp | GGAAAGGATTCTGAAGGAAAACAGTGGCTTAAAGAGTaGAATAAATACAGGGCTTGGATTTGTCTCAAGCAT | + |
Preference number: 4 (lower is better) Translates to: GKDSEGKQWLKE*NKYRAWICLKH Trigger: ATGCTTGAGACAAATCCAAGCCCTGTATTTATTCAACTCTTTAAGCCACTGTTTTCCTTCAGAATCCTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAACATTCAAAGCCTTCATaGCTTCAACTGCATCTTCTC | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKHSKPS*LQLHLL Trigger: GAGAAGATGCAGTTGAAGCCATGAAGGCTTTGAATG...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR TCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAATTTCACACAATGGTATaGGTTCATCCTCAAAGAGGT | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKFHTMV*VHPQRG Trigger: ACCTCTTTGAGGATGAACTCATACCATTGTGTGAAA...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR TCA 90 bp | TTGTCTCAAGCATATCTGAAATACATTGTACTGATTTCTAGAAAGTCCCCAGAGGGCTTCCTGCTTATTTaGGAATGTTACAAATGCATA | + |
Preference number: 4 (lower is better) Translates to: LSQAYLKYIVLISRKSPEGFLLI*ECYKCI Trigger: TATGCATTTGTAACATTCTCAAATAAGCAGGAAGCC...CTCTGGGGACTTTCTAGAAATCAGTACAATGTATTTCAGATATGCTTGAGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAATTTATCAGCAGCACTTaGGTAGACAATGACATCAAC | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKFISST*VDNDIN Trigger: GTTGATGTCATTGTCTACCCAAGTGCTGCTGATAAA...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CCA 90 bp | TTGTCTCAAGCATATCTGAAATACATTGTACTGATTTCTAGAAAGTCCCCAGAGATGTCCTTTAGTAGCTaGGAAATGAAGACTTGGAAT | + |
Preference number: 4 (lower is better) Translates to: LSQAYLKYIVLISRKSPEMSFSS*EMKTWN Trigger: ATTCCAAGTCTTCATTTCCCAGCTACTAAAGGACAT...CTCTGGGGACTTTCTAGAAATCAGTACAATGTATTTCAGATATGCTTGAGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CCA 90 bp | GATTTGTCTCAAGCATATCTGAAATACATTGTACTGATTTCTAGAAAGTCCCCATTTGATCTTGTCCAATaGCAGAATGCAGTTGGTACA | + |
Preference number: 4 (lower is better) Translates to: DLSQAYLKYIVLISRKSPFDLVQ*QNAVGT Trigger: TGTACCAACTGCATTCTGCCATTGGACAAGATCAAA...TGGGGACTTTCTAGAAATCAGTACAATGTATTTCAGATATGCTTGAGACAAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR GCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAAATTAAGTTGCTTGATTaGATTCTTGGCTTCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKIKLLD*ILGFLL Trigger: AAGCAGGAAGCCAAGAATGCAATCAAGCAACTTAAT...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAATCTTTCCACAGCACCTaGTTTAATACTGTTGAATTC | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKSFHST*FNTVEF Trigger: GAATTCAACAGTATTAAACCAGGTGCTGTGGAAAGA...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CCA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAAATGTCCTTTAGTAGCTaGGAAATGAAGACTTGGAAT | + |
Preference number: 4 (lower is better) Translates to: FHPISLRLLDYIVCSSSKMSFSS*EMKTWN Trigger: ATTCCAAGTCTTCATTTCCCAGCTACTAAAGGACAT...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS GCA 90 bp | TTCCTGGACCAAGCTATATCCTGTGCGCTGGACCAGTGCGCGGAGTaGCGCTTCCTTCTGGGTGCCGCTCAATCCATCCCCGGATTTGTG | + |
Preference number: 5 (lower is better) Translates to: FLDQAISCALDQCAE*RFLLGAAQSIPGFV Trigger: CACAAATCCGGGGATGGATTGAGCGGCACCCAGAAGGAAGCGGCACTCCGCGCACTGGTCCAGCGCACAGGATATAGCTTGGTCCAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 ENSMUST00000224564.2 |
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CDS GCA 90 bp | TTGTCCATTTTCCTGGACCAAGCTATATCCTGTGCGCTGGACCAGTaGGCGGAGTGCCGCTTCCTTCTGGGTGCCGCTCAATCCATCCCC | + |
Preference number: 5 (lower is better) Translates to: LSIFLDQAISCALDQ*AECRFLLGAAQSIP Trigger: GGGGATGGATTGAGCGGCACCCAGAAGGAAGCGGCACTCCGCGCACTGGTCCAGCGCACAGGATATAGCTTGGTCCAGGAAAATGGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 ENSMUST00000224564.2 |
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CDS TCA 90 bp | ACTTCTGGTTCTGCCCAGTCTACTGCAATAGGATGTCCCCACAACTaGATTCTTCCTGGCAGCAGCCTCCGCCTAGCCATGGCGGCTGCT | + |
Preference number: 5 (lower is better) Translates to: TSGSAQSTAIGCPHN*ILPGSSLRLAMAAA Trigger: AGCAGCCGCCATGGCTAGGCGGAGGCTGCTGCCAGGAAGAATTCAGTTGTGGGGACATCCTATTGCAGTAGACTGGGCAGAACCAGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 ENSMUST00000224400.2 ENSMUST00000224564.2 |
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CDS CCA 90 bp | GCCACCGGTGCCCCGGGTGTACCTAACATAACTGTCCTTGTCCACTaGCTTGGCCAAGGTCACTTCTATTGGGGAACCATCCAGCACCTT | + |
Preference number: 5 (lower is better) Translates to: ATGAPGVPNITVLVH*LGQGHFYWGTIQHL Trigger: AAGGTGCTGGATGGTTCCCCAATAGAAGTGACCTTGGCCAAGCCAGTGGACAAGGACAGTTATGTTAGGTACACCCGGGGCACCGGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 ENSMUST00000224400.2 ENSMUST00000224564.2 |
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CDS CCA 90 bp | GTATATGCTGCTAAGTCTTGTCCAAGTGTCACTGCTTGCTTGAGCTaGGCTGTAGACACAGGAGCGGTGGCACTGGGGACAGCATATCCT | + |
Preference number: 5 (lower is better) Translates to: VYAAKSCPSVTACLS*AVDTGAVALGTAYP Trigger: AGGATATGCTGTCCCCAGTGCCACCGCTCCTGTGTCTACAGCCCAGCTCAAGCAAGCAGTGACACTTGGACAAGACTTAGCAGCATATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | GCTCAGCCTGGGATCATACTCCACACTGTATGCAATGCTGAAGGCCTCTTACAGTCCAAGTGTCACTGCTaGCTTGAGCTGGGCTGTAGA | + |
Preference number: 5 (lower is better) Translates to: AQPGIILHTVCNAEGLLQSKCHC*LELGCR Trigger: TCTACAGCCCAGCTCAAGCAAGCAGTGACACTTGGA...CTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGAGTATGATCCCAGGCTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | CTCAGGAAAGGCATTGCTTTGGGGGAAGGTATGACTTGTGGTCATGAGGGATCTGTAGGTGTATTCTCCTaGCAGCATGGTGTTCCTGCC | + |
Preference number: 5 (lower is better) Translates to: LRKGIALGEGMTCGHEGSVGVFS*QHGVPA Trigger: GGCAGGAACACCATGCTGCAAGGAGAATACACCTAC...AGATCCCTCATGACCACAAGTCATACCTTCCCCCAAAGCAATGCCTTTCCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | CTCAGGAAAGGCATTGCTTTGGGGGAAGGTATGACTTGTGGTCATGAGGGATCTTCTCTCTTGTCTCCTTaGACGTGGTATCCTCGACCC | + |
Preference number: 5 (lower is better) Translates to: LRKGIALGEGMTCGHEGSSLLSP*TWYPRP Trigger: GGGTCGAGGATACCACGTCAAAGGAGACAAGAGAGA...AGATCCCTCATGACCACAAGTCATACCTTCCCCCAAAGCAATGCCTTTCCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | TATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGGTGTCTAAGGTAGGTGTATTCTCCTaGCAGCATGGTGTTCCTGCC | + |
Preference number: 5 (lower is better) Translates to: YAMLKASYRASCFPLVSKVGVFS*QHGVPA Trigger: GGCAGGAACACCATGCTGCAAGGAGAATACACCTAC...CTTAGACACCAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | CACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGGTACAAACAATCGGCAATaGTCCACACTGGCACAGACT | + |
Preference number: 5 (lower is better) Translates to: HTVCNAEGLLQSFLLSSGTNNRQ*STLAQT Trigger: AGTCTGTGCCAGTGTGGACAATTGCCGATTGTTTGT...ACCAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | CTCAGGAAAGGCATTGCTTTGGGGGAAGGTATGACTTGTGGTCATGAGGGATCTCTGATGAGAGCCCTGTaGCTGAGATGTCCTTTAGTA | + |
Preference number: 5 (lower is better) Translates to: LRKGIALGEGMTCGHEGSLMRAL*LRCPLV Trigger: TACTAAAGGACATCTCAGCAACAGGGCTCTCATCAG...AGATCCCTCATGACCACAAGTCATACCTTCCCCCAAAGCAATGCCTTTCCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | TCTGTGATTTGGGAATCCTTGAGCAGGGAAAGGATTCTGAAGGAAAACAGTGGCAATGGCAGAATGCAGTaGGTACACTGGCTGTCCCCA | + |
Preference number: 5 (lower is better) Translates to: SVIWESLSRERILKENSGNGRMQ*VHWLSP Trigger: TGGGGACAGCCAGTGTACCAACTGCATTCTGCCATT...GCCACTGTTTTCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | ATACTCCACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCCCTCTTTTTGGTTTaGGGGATTCCTCCCACAAAC | + |
Preference number: 5 (lower is better) Translates to: ILHTVCNAEGLLQSFLLSSLFLV*GIPPTN Trigger: GTTTGTGGGAGGAATCCCCAAAACCAAAAAGAGGGA...GGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGAGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | ATACGACGAATAAATCTTGTGGTCTCAGGAAAGGCATTGCTTTGGGGGAAGGTACCAAGGTCACTTCTATaGGGGAACCATCCAGCACCT | + |
Preference number: 5 (lower is better) Translates to: IRRINLVVSGKALLWGKVPRSLL*GNHPAP Trigger: AGGTGCTGGATGGTTCCCCAATAGAAGTGACCTTGG...TACCTTCCCCCAAAGCAATGCCTTTCCTGAGACCACAAGATTTATTCGTCGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | CACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGGTGGTAGACCTCATAGGTaGTATATGCTGCTAAGTCTT | + |
Preference number: 5 (lower is better) Translates to: HTVCNAEGLLQSFLLSSGGRPHR*YMLLSL Trigger: AAGACTTAGCAGCATATACAACCTATGAGGTCTACC...ACCAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | AAGTCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAATCTCTCTTGTCTCCTTaGACGTGGTATCCTCGACCC | + |
Preference number: 5 (lower is better) Translates to: KSSFTLELGTGMVSVIWESLLSP*TWYPRP Trigger: GGGTCGAGGATACCACGTCAAAGGAGACAAGAGAGA...TTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | TCCACACTGTATGCAATGCTGAAGGCCTCTTACAGAGCTTCCTGCTTTCCTCTGTGGCTTCCTGCTTATTaGAGAATGTTACAAATGCAT | + |
Preference number: 5 (lower is better) Translates to: STLYAMLKASYRASCFPLWLPAY*RMLQMH Trigger: ATGCATTTGTAACATTCTCAAATAAGCAGGAAGCCA...CAGAGGAAAGCAGGAAGCTCTGTAAGAGGCCTTCAGCATTGCATACAGTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | TATCCTCTTCCTGAGACACTCAGGATCCTTGGAAGAACAACTTTTGCTGTCCGTTGCTTGATTGCATTCTaGGCTTCCTGCTTATTTGAG | + |
Preference number: 5 (lower is better) Translates to: YPLPETLRILGRTTFAVRCLIAF*ASCLFE Trigger: CTCAAATAAGCAGGAAGCCAAGAATGCAATCAAGCA...ACGGACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTGTCTCAGGAAGAGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | GAACTGGGTAGAGAACTCAAAGGTAACCTCAATTTTAATGCAACTTCTTGGAGACCAAGGTCACTTCTATaGGGGAACCATCCAGCACCT | + |
Preference number: 5 (lower is better) Translates to: ELGRELKGNLNFNATSWRPRSLL*GNHPAP Trigger: AGGTGCTGGATGGTTCCCCAATAGAAGTGACCTTGG...TCTCCAAGAAGTTGCATTAAAATTGAGGTTACCTTTGAGTTCTCTACCCAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR CAA 90 bp | CAGTGGCTTAAAGAGTTGAATAAATACAGGGCTTGGATTTGTCTCAAGCATATCAATGGCAGAATGCAGTaGGTACACTGGCTGTCCCCA | + |
Preference number: 5 (lower is better) Translates to: QWLKELNKYRAWICLKHINGRMQ*VHWLSP Trigger: TGGGGACAGCCAGTGTACCAACTGCATTCTGCCATT...GATATGCTTGAGACAAATCCAAGCCCTGTATTTATTCAACTCTTTAAGCCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | CAGTGGCTTAAAGAGTTGAATAAATACAGGGCTTGGATTTGTCTCAAGCATATCTCCAAGTGTCACTGCTaGCTTGAGCTGGGCTGTAGA | + |
Preference number: 5 (lower is better) Translates to: QWLKELNKYRAWICLKHISKCHC*LELGCR Trigger: TCTACAGCCCAGCTCAAGCAAGCAGTGACACTTGGA...GATATGCTTGAGACAAATCCAAGCCCTGTATTTATTCAACTCTTTAAGCCACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | CTCTTCCTGAGACACTCAGGATCCTTGGAAGAACAACTTTTGCTGTCCGTGGATTGGCTTCCTGCTTATTaGAGAATGTTACAAATGCAT | + |
Preference number: 5 (lower is better) Translates to: LFLRHSGSLEEQLLLSVDWLPAY*RMLQMH Trigger: ATGCATTTGTAACATTCTCAAATAAGCAGGAAGCCA...ATCCACGGACAGCAAAAGTTGTTCTTCCAAGGATCCTGAGTGTCTCAGGAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | GTTTCACTATCAAGGGACTCAGTCATAGTAAAGCCAGCTGCACATATTGAAAGAACAAACAATCGGCAATaGTCCACACTGGCACAGACT | + |
Preference number: 5 (lower is better) Translates to: VSLSRDSVIVKPAAHIERTNNRQ*STLAQT Trigger: AGTCTGTGCCAGTGTGGACAATTGCCGATTGTTTGT...TCTTTCAATATGTGCAGCTGGCTTTACTATGACTGAGTCCCTTGATAGTGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR CAA 90 bp | ACCATGATGGGTGTAAGGCTTTCCTGGAATAGTTTCACTATCAAGGGACTCAGTAGTTTGTCTTCTCTCTaGTCTCCTTTGACGTGGTAT | + |
Preference number: 5 (lower is better) Translates to: TMMGVRLSWNSFTIKGLSSLSSL*SPLTWY Trigger: ATACCACGTCAAAGGAGACAAGAGAGAAGACAAACT...ACTGAGTCCCTTGATAGTGAAACTATTCCAGGAAAGCCTTACACCCATCATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR CAA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAACCAAGGTCACTTCTATaGGGGAACCATCCAGCACCT | + |
Preference number: 5 (lower is better) Translates to: FHPISLRLLDYIVCSSSKPRSLL*GNHPAP Trigger: AGGTGCTGGATGGTTCCCCAATAGAAGTGACCTTGG...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CAA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAAGTAGGTGTATTCTCCTaGCAGCATGGTGTTCCTGCC | + |
Preference number: 5 (lower is better) Translates to: FHPISLRLLDYIVCSSSKVGVFS*QHGVPA Trigger: GGCAGGAACACCATGCTGCAAGGAGAATACACCTAC...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CAA 90 bp | GATTTGGGAATCCTTGAGCAGGGAAAGGATTCTGAAGGAAAACAGTGGCTTAAAAGTTTGTCTTCTCTCTaGTCTCCTTTGACGTGGTAT | + |
Preference number: 5 (lower is better) Translates to: DLGILEQGKDSEGKQWLKSLSSL*SPLTWY Trigger: ATACCACGTCAAAGGAGACAAGAGAGAAGACAAACT...TTTAAGCCACTGTTTTCCTTCAGAATCCTTTCCCTGCTCAAGGATTCCCAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | AGTAATACGACGAATAAATCTTGTGGTCTCAGGAAAGGCATTGCTTTGGGGGAAGGTAGACCTCATAGGTaGTATATGCTGCTAAGTCTT | + |
Preference number: 5 (lower is better) Translates to: SNTTNKSCGLRKGIALGEGRPHR*YMLLSL Trigger: AAGACTTAGCAGCATATACAACCTATGAGGTCTACC...TTCCCCCAAAGCAATGCCTTTCCTGAGACCACAAGATTTATTCGTCGTATTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | AAGTCATCTTTCACTCTAGAACTTGGTACTGGCATGGTTTCTGTGATTTGGGAATGCTTGATTGCATTCTaGGCTTCCTGCTTATTTGAG | + |
Preference number: 5 (lower is better) Translates to: KSSFTLELGTGMVSVIWECLIAF*ASCLFE Trigger: CTCAAATAAGCAGGAAGCCAAGAATGCAATCAAGCA...TTCCCAAATCACAGAAACCATGCCAGTACCAAGTTCTAGAGTGAAAGATGACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | TTGTCTCAAGCATATCTGAAATACATTGTACTGATTTCTAGAAAGTCCCCAGAGCTGATGAGAGCCCTGTaGCTGAGATGTCCTTTAGTA | + |
Preference number: 5 (lower is better) Translates to: LSQAYLKYIVLISRKSPELMRAL*LRCPLV Trigger: TACTAAAGGACATCTCAGCAACAGGGCTCTCATCAG...CTCTGGGGACTTTCTAGAAATCAGTACAATGTATTTCAGATATGCTTGAGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAAACAAACAATCGGCAATaGTCCACACTGGCACAGACT | + |
Preference number: 5 (lower is better) Translates to: FHPISLRLLDYIVCSSSKTNNRQ*STLAQT Trigger: AGTCTGTGCCAGTGTGGACAATTGCCGATTGTTTGT...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CAA 90 bp | GATTTGTCTCAAGCATATCTGAAATACATTGTACTGATTTCTAGAAAGTCCCCATCCCTCTTTTTGGTTTaGGGGATTCCTCCCACAAAC | + |
Preference number: 5 (lower is better) Translates to: DLSQAYLKYIVLISRKSPSLFLV*GIPPTN Trigger: GTTTGTGGGAGGAATCCCCAAAACCAAAAAGAGGGA...TGGGGACTTTCTAGAAATCAGTACAATGTATTTCAGATATGCTTGAGACAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAATCCCTCTTTTTGGTTTaGGGGATTCCTCCCACAAAC | + |
Preference number: 5 (lower is better) Translates to: FHPISLRLLDYIVCSSSKSLFLV*GIPPTN Trigger: GTTTGTGGGAGGAATCCCCAAAACCAAAAAGAGGGA...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CAA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAACTGATGAGAGCCCTGTaGCTGAGATGTCCTTTAGTA | + |
Preference number: 5 (lower is better) Translates to: FHPISLRLLDYIVCSSSKLMRAL*LRCPLV Trigger: TACTAAAGGACATCTCAGCAACAGGGCTCTCATCAG...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CAA 90 bp | GAACTGGGTAGAGAACTCAAAGGTAACCTCAATTTTAATGCAACTTCTTGGAGATTTTCACGGAAGACATaGTGTCCTCATCAACTTCAA | + |
Preference number: 5 (lower is better) Translates to: ELGRELKGNLNFNATSWRFSRKT*CPHQLQ Trigger: TTGAAGTTGATGAGGACACAATGTCTTCCGTGAAAA...TCTCCAAGAAGTTGCATTAAAATTGAGGTTACCTTTGAGTTCTCTACCCAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075838.8 |
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CDS-3UTR CAA 90 bp | TTGTCTCAAGCATATCTGAAATACATTGTACTGATTTCTAGAAAGTCCCCAGAGTTTTCACGGAAGACATaGTGTCCTCATCAACTTCAA | + |
Preference number: 5 (lower is better) Translates to: LSQAYLKYIVLISRKSPEFSRKT*CPHQLQ Trigger: TTGAAGTTGATGAGGACACAATGTCTTCCGTGAAAA...CTCTGGGGACTTTCTAGAAATCAGTACAATGTATTTCAGATATGCTTGAGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS-3UTR CAA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAATTTTCACGGAAGACATaGTGTCCTCATCAACTTCAA | + |
Preference number: 5 (lower is better) Translates to: FHPISLRLLDYIVCSSSKFSRKT*CPHQLQ Trigger: TTGAAGTTGATGAGGACACAATGTCTTCCGTGAAAA...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS-3UTR CAA 90 bp | TTCCACCCAATCTCTTTAAGGCTACTGGACTATATAGTTTGTAGTTCATCTAAATGGCTTCCTGCTTATTaGAGAATGTTACAAATGCAT | + |
Preference number: 5 (lower is better) Translates to: FHPISLRLLDYIVCSSSKWLPAY*RMLQMH Trigger: ATGCATTTGTAACATTCTCAAATAAGCAGGAAGCCA...TTTAGATGAACTACAAACTATATAGTCCAGTAGCCTTAAAGAGATTGGGTGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224564.2 |
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CDS GCA 72 bp | CAAGCTATATCCTGTGCGCTGGACCAGTGCGCGGAGTaGCGCTTCCTTCTGGGTGCCGCTCAATCCATCCCC | + |
Preference number: 6 (lower is better) Translates to: QAISCALDQCAE*RFLLGAAQSIP Trigger: GGGGATGGATTGAGCGGCACCCAGAAGGAAGCGGCACTCCGCGCACTGGTCCAGCGCACAGGATATAGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 ENSMUST00000224564.2 |
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CDS GCA 72 bp | ATATCCTGGGAACACAGTGGCAGAAGTGGCCGTGGGTaGTGTAGTCCCAGCGTCCCCTCCTTCTGTGGGGAT | + |
Preference number: 6 (lower is better) Translates to: ISWEHSGRSGRG*CSPSVPSFCGD Trigger: ATCCCCACAGAAGGAGGGGACGCTGGGACTACAGCACCCACGGCCACTTCTGCCACTGTGTTCCCAGGATAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS GCA 72 bp | GCTGGACCAGTGCGCGGAGTGCCGCTTCCTTCTGGGTaGCGCTCAATCCATCCCCGGATTTGTGATTTGATT | + |
Preference number: 6 (lower is better) Translates to: AGPVRGVPLPSG*RSIHPRICDLI Trigger: AATCAAATCACAAATCCGGGGATGGATTGAGCGGCACCCAGAAGGAAGCGGCACTCCGCGCACTGGTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 ENSMUST00000224564.2 |
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CDS CCA 72 bp | TGTCCATTTTCCTGGACCAAGCTATATCCTGTGCGCTaGACCAGTGCGCGGAGTGCCGCTTCCTTCTGGGTG | + |
Preference number: 6 (lower is better) Translates to: CPFSWTKLYPVR*TSARSAASFWV Trigger: CACCCAGAAGGAAGCGGCACTCCGCGCACTGGTCCAGCGCACAGGATATAGCTTGGTCCAGGAAAATGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 ENSMUST00000224564.2 |
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CDS CCA 72 bp | GCTAAGTCTTGTCCAAGTGTCACTGCTTGCTTGAGCTaGGCTGTAGACACAGGAGCGGTGGCACTGGGGACA | + |
Preference number: 6 (lower is better) Translates to: AKSCPSVTACLS*AVDTGAVALGT Trigger: TGTCCCCAGTGCCACCGCTCCTGTGTCTACAGCCCAGCTCAAGCAAGCAGTGACACTTGGACAAGACTTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS TCA 72 bp | TCTGCCCAGTCTACTGCAATAGGATGTCCCCACAACTaGATTCTTCCTGGCAGCAGCCTCCGCCTAGCCATG | + |
Preference number: 6 (lower is better) Translates to: SAQSTAIGCPHN*ILPGSSLRLAM Trigger: CATGGCTAGGCGGAGGCTGCTGCCAGGAAGAATTCAGTTGTGGGGACATCCTATTGCAGTAGACTGGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 ENSMUST00000224400.2 ENSMUST00000224564.2 |
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CDS TCA 72 bp | TCGCTTCATCCACATAGGCGCTTAGCTTTGGTGGTATaGAAGGGTGGATTGCAGGATTCTGGCTGGCCAGCG | + |
Preference number: 6 (lower is better) Translates to: SLHPHRRLALVV*KGGLQDSGWPA Trigger: CGCTGGCCAGCCAGAATCCTGCAATCCACCCTTTCATACCACCAAAGCTAAGCGCCTATGTGGATGAAGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS CCA 72 bp | GCCCCGGGTGTACCTAACATAACTGTCCTTGTCCACTaGCTTGGCCAAGGTCACTTCTATTGGGGAACCATC | + |
Preference number: 6 (lower is better) Translates to: APGVPNITVLVH*LGQGHFYWGTI Trigger: GATGGTTCCCCAATAGAAGTGACCTTGGCCAAGCCAGTGGACAAGGACAGTTATGTTAGGTACACCCGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 ENSMUST00000224400.2 ENSMUST00000224564.2 |
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CDS CCA 72 bp | GGATTCCTCCCACAAACAATCGGCAATTGTCCACACTaGCACAGACTCCCAAGAGACGGCCAGTCCGAATTT | + |
Preference number: 6 (lower is better) Translates to: GFLPQTIGNCPH*HRLPRDGQSEF Trigger: AAATTCGGACTGGCCGTCTCTTGGGAGTCTGTGCCAGTGTGGACAATTGCCGATTGTTTGTGGGAGGAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 ENSMUST00000224400.2 ENSMUST00000224564.2 |
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CDS CAA 72 bp | TTGGTTTTGGGGATTCCTCCCACAAACAATCGGCAATaGTCCACACTGGCACAGACTCCCAAGAGACGGCCA | + |
Preference number: 6 (lower is better) Translates to: LVLGIPPTNNRQ*STLAQTPKRRP Trigger: TGGCCGTCTCTTGGGAGTCTGTGCCAGTGTGGACAATTGCCGATTGTTTGTGGGAGGAATCCCCAAAACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 ENSMUST00000224400.2 ENSMUST00000224564.2 |
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CDS GCA 72 bp | AGACATTGTGTCCTCATCAACTTCAACTTCTGGTTCTaGCCAGTCTACTGCAATAGGATGTCCCCACAACTG | + |
Preference number: 6 (lower is better) Translates to: RHCVLINFNFWF*PVYCNRMSPQL Trigger: CAGTTGTGGGGACATCCTATTGCAGTAGACTGGGCAGAACCAGAAGTTGAAGTTGATGAGGACACAATGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 ENSMUST00000224400.2 ENSMUST00000224564.2 |
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CDS GCA 72 bp | TTAGAAGGTTCCATATGCATCGCCTCGGGTGGTCAGTaGAAAAGTAGGGTAGACCTCATAGGTTGTATATGC | + |
Preference number: 6 (lower is better) Translates to: LEGSICIASGGQ*KSRVDLIGCIC Trigger: GCATATACAACCTATGAGGTCTACCCTACTTTTGCACTGACCACCCGAGGCGATGCATATGGAACCTTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 |
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CDS CAA 72 bp | TTCATCTCTGATAAGATTTCTTCCCTCTTTTTGGTTTaGGGGATTCCTCCCACAAACAATCGGCAATTGTCC | + |
Preference number: 6 (lower is better) Translates to: FISDKISSLFLV*GIPPTNNRQLS Trigger: GGACAATTGCCGATTGTTTGTGGGAGGAATCCCCAAAACCAAAAAGAGGGAAGAAATCTTATCAGAGATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 ENSMUST00000224400.2 ENSMUST00000224564.2 |
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CDS TCA 72 bp | AAGTTGCTTGATTGCATTCTTGGCTTCCTGCTTATTTaGGAATGTTACAAATGCATAGCCTCTGTTGTTACC | + |
Preference number: 6 (lower is better) Translates to: KLLDCILGFLLI*ECYKCIASVVT Trigger: GGTAACAACAGAGGCTATGCATTTGTAACATTCTCAAATAAGCAGGAAGCCAAGAATGCAATCAAGCAACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075838.8 ENSMUST00000224304.2 ENSMUST00000224400.2 ENSMUST00000224564.2 |