Pregenerated sensors for A1BG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022347Ensembl transcript IDs: ENSMUST00000096418.5, ENSMUST00000228632.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TGTGTCTGCAGCCACATTAGCGGCCTAGACAAAGAAATGGCTTCATaGACTCAGCAAGTTGCCACAGGGCCTTTCCACACTGACCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: CVCSHISGLDKEMAS*TQQVATGPFHTDLG Trigger: ACCAAGGTCAGTGTGGAAAGGCCCTGTGGCAACTTGCTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCTAATGTGGCTGCAGACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CCA 90 bp | TCATTGACTCAGCAAGTTGCCACAGGGCCTTTCCACACTGACCTTGGTGAAGCACTTCCAGCCTTGGCTTaGGTGGTGGCCCATTCACCC | + |
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Preference number: 4 (lower is better) Translates to: SLTQQVATGPFHTDLGEALPALA*VVAHSP Trigger: GGGTGAATGGGCCACCACCCAAGCCAAGGCTGGAAG...TGCTTCACCAAGGTCAGTGTGGAAAGGCCCTGTGGCAACTTGCTGAGTCAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR TCA 90 bp | TCATTGACTCAGCAAGTTGCCACAGGGCCTTTCCACACTGACCTTGGTGAAGCATCCGGTAGCGGCAGGTaGAAGGACCTGGGTTATCCA | + |
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Preference number: 4 (lower is better) Translates to: SLTQQVATGPFHTDLGEASGSGR*KDLGYP Trigger: TGGATAACCCAGGTCCTTTCACCTGCCGCTACCGGA...TGCTTCACCAAGGTCAGTGTGGAAAGGCCCTGTGGCAACTTGCTGAGTCAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR TCA 90 bp | ATTAGCGGCCTAGACAAAGAAATGGCTTCATTGACTCAGCAAGTTGCCACAGGGTTCCTGGGCCCAGAGTaGACCCCCAGAGCAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: ISGLDKEMASLTQQVATGFLGPE*TPRAAV Trigger: TACTGCTGCTCTGGGGGTTCACTCTGGGCCCAGGAA...CCCTGTGGCAACTTGCTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CCA 90 bp | TCATTGACTCAGCAAGTTGCCACAGGGCCTTTCCACACTGACCTTGGTGAAGCACTGACCCTAGGCACATaGCCGTGGCATCGAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: SLTQQVATGPFHTDLGEALTLGT*PWHRKM Trigger: CATCTTTCGATGCCACGGCCATGTGCCTAGGGTCAG...TGCTTCACCAAGGTCAGTGTGGAAAGGCCCTGTGGCAACTTGCTGAGTCAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR GCA 90 bp | TCATTGACTCAGCAAGTTGCCACAGGGCCTTTCCACACTGACCTTGGTGAAGCACATGGGTTAGGTAGCTaGAGCTGTAGTTGCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SLTQQVATGPFHTDLGEAHGLGS*SCSCQA Trigger: AGCCTGGCAACTACAGCTGCAGCTACCTAACCCATG...TGCTTCACCAAGGTCAGTGTGGAAAGGCCCTGTGGCAACTTGCTGAGTCAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CCA 90 bp | AGCGGCCTAGACAAAGAAATGGCTTCATTGACTCAGCAAGTTGCCACAGGGCCTGCTGTTCCCTTGTGCTaGACATCAGGTTTCTGGACG | + |
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Preference number: 4 (lower is better) Translates to: SGLDKEMASLTQQVATGPAVPLC*TSGFWT Trigger: CGTCCAGAAACCTGATGTCCAGCACAAGGGAACAGC...AGGCCCTGTGGCAACTTGCTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR TCA 90 bp | TGTGTCTGCAGCCACATTAGCGGCCTAGACAAAGAAATGGCTTCATTGACTCAGGGTTCCAGCAGGGACTaGGGCTCTGCCCATAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: CVCSHISGLDKEMASLTQGSSRD*GSAHSL Trigger: TAAACTATGGGCAGAGCCTCAGTCCCTGCTGGAACC...CTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCTAATGTGGCTGCAGACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR GCA 90 bp | TCATTGACTCAGCAAGTTGCCACAGGGCCTTTCCACACTGACCTTGGTGAAGCACATTCCGAGGAGCTTTaGAGGCAAGGGTCTCATATG | + |
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Preference number: 4 (lower is better) Translates to: SLTQQVATGPFHTDLGEAHSEEL*RQGSHM Trigger: CATATGAGACCCTTGCCTGCAAAGCTCCTCGGAATG...TGCTTCACCAAGGTCAGTGTGGAAAGGCCCTGTGGCAACTTGCTGAGTCAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR GCA 90 bp | AGCGGCCTAGACAAAGAAATGGCTTCATTGACTCAGCAAGTTGCCACAGGGCCTAGCACCTTCCCTCCTTaGCTGAGTTGGAATTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SGLDKEMASLTQQVATGPSTFPP*LSWNSA Trigger: AGCTGAATTCCAACTCAGGCAAGGAGGGAAGGTGCT...AGGCCCTGTGGCAACTTGCTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CCA 90 bp | TCATTGACTCAGCAAGTTGCCACAGGGCCTTTCCACACTGACCTTGGTGAAGCACCTCCTTGCCTGAGTTaGAATTCAGCTGCATTCCGA | + |
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Preference number: 4 (lower is better) Translates to: SLTQQVATGPFHTDLGEAPPCLS*NSAAFR Trigger: TCGGAATGCAGCTGAATTCCAACTCAGGCAAGGAGG...TGCTTCACCAAGGTCAGTGTGGAAAGGCCCTGTGGCAACTTGCTGAGTCAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CCA 90 bp | CAGTGTACAGCTCTGGAAATATTAAGAACCCAAAACCTCAAACACAGCTCAGGACAGCCTTGGCTTGGGTaGTGGCCCATTCACCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: QCTALEILRTQNLKHSSGQPWLG*WPIHPQ Trigger: CTGCGGGTGAATGGGCCACCACCCAAGCCAAGGCTG...TCCTGAGCTGTGTTTGAGGTTTTGGGTTCTTAATATTTCCAGAGCTGTACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR TCA 90 bp | TGTGTCTGCAGCCACATTAGCGGCCTAGACAAAGAAATGGCTTCATTGACTCAGCAGGGAAAAGCGGTATaGCAGCACCTGTGTCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: CVCSHISGLDKEMASLTQQGKAV*QHLCLK Trigger: CTTGAGACACAGGTGCTGTCATACCGCTTTTCCCTG...CTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCTAATGTGGCTGCAGACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR TCA 90 bp | TGTGTCTGCAGCCACATTAGCGGCCTAGACAAAGAAATGGCTTCATTGACTCAGAGTGGGTGGAGCCTGTaGGGCATACATCTTGATGGT | + |
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Preference number: 4 (lower is better) Translates to: CVCSHISGLDKEMASLTQSGWSL*GIHLDG Trigger: ACCATCAAGATGTATGCCTCACAGGCTCCACCCACT...CTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCTAATGTGGCTGCAGACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR GCA 90 bp | ATTAGCGGCCTAGACAAAGAAATGGCTTCATTGACTCAGCAAGTTGCCACAGGGCCAGCTGTTCCCTTGTaGTGGACATCAGGTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: ISGLDKEMASLTQQVATGPAVPL*WTSGFW Trigger: CCAGAAACCTGATGTCCAGCACAAGGGAACAGCTGG...CCCTGTGGCAACTTGCTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CCA 90 bp | ATTAGCGGCCTAGACAAAGAAATGGCTTCATTGACTCAGCAAGTTGCCACAGGGCCATCAAACACAGAGTaGGTGGAGCCTGTGAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: ISGLDKEMASLTQQVATGPSNTE*VEPVRH Trigger: ATGCCTCACAGGCTCCACCCACTCTGTGTTTGATGG...CCCTGTGGCAACTTGCTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| 3UTR CAA 72 bp | AGCCACATTAGCGGCCTAGACAAAGAAATGGCTTCATaGACTCAGCAAGTTGCCACAGGGCCTTTCCACACT | + |
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Preference number: 4 (lower is better) Translates to: SHISGLDKEMAS*TQQVATGPFHT Trigger: AGTGTGGAAAGGCCCTGTGGCAACTTGCTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCTAATGTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR TCA 90 bp | TCATTGACTCAGCAAGTTGCCACAGGGCCTTTCCACACTGACCTTGGTGAAGCAGTGAGGCATACATCTTaGTGGTCACAATATCACTGG | + |
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Preference number: 4 (lower is better) Translates to: SLTQQVATGPFHTDLGEAVRHTS*WSQYHW Trigger: CCAGTGATATTGTGACCATCAAGATGTATGCCTCAC...TGCTTCACCAAGGTCAGTGTGGAAAGGCCCTGTGGCAACTTGCTGAGTCAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR TCA 90 bp | ATTAGCGGCCTAGACAAAGAAATGGCTTCATTGACTCAGCAAGTTGCCACAGGGGTGGGGCTAAACCCATaGATTTTCAGCACCTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: ISGLDKEMASLTQQVATGVGLNP*IFSTFP Trigger: AGGGAAGGTGCTGAAAATTCATGGGTTTAGCCCCAC...CCCTGTGGCAACTTGCTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CCA 90 bp | TGCAGCCACATTAGCGGCCTAGACAAAGAAATGGCTTCATTGACTCAGCAAGTTTGGACATCAGGTTTCTaGACGCCATCCACTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CSHISGLDKEMASLTQQVWTSGF*TPSTPS Trigger: GGAAGGAGTGGATGGCGTCCAGAAACCTGATGTCCA...AACTTGCTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCTAATGTGGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CCA 90 bp | ATTAGCGGCCTAGACAAAGAAATGGCTTCATTGACTCAGCAAGTTGCCACAGGGTGGTCACAATATCACTaGGCTCAGAGGGTTCACCTG | + |
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Preference number: 4 (lower is better) Translates to: ISGLDKEMASLTQQVATGWSQYH*AQRVHL Trigger: CAGGTGAACCCTCTGAGCCCAGTGATATTGTGACCA...CCCTGTGGCAACTTGCTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR GCA 90 bp | TGTGTCTGCAGCCACATTAGCGGCCTAGACAAAGAAATGGCTTCATTGACTCAGTCACCTCCACAGCATTaGTTAGCATGGTCCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: CVCSHISGLDKEMASLTQSPPQH*LAWSTC Trigger: ACAAGTGGACCATGCTAAGCAATGCTGTGGAGGTGA...CTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCTAATGTGGCTGCAGACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR GCA 90 bp | TGTGTCTGCAGCCACATTAGCGGCCTAGACAAAGAAATGGCTTCATTGACTCAGGAGTTGGAATTCAGCTaGATTCCGAGGAGCTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: CVCSHISGLDKEMASLTQELEFS*IPRSFA Trigger: TGCAAAGCTCCTCGGAATGCAGCTGAATTCCAACTC...CTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCTAATGTGGCTGCAGACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR TCA 90 bp | CTTACATTGAGAAGAATGGGTATTATACCTGTCTTGAACCCTTCCCAAGAACACTTCAGTGCTGGCAGGTaGATGTCAACAGGGGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LTLRRMGIIPVLNPSQEHFSAGR*MSTGGS Trigger: GGAACCCCCTGTTGACATTCACCTGCCAGCACTGAA...GTGTTCTTGGGAAGGGTTCAAGACAGGTATAATACCCATTCTTCTCAATGTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR GCA 90 bp | TGCAGCCACATTAGCGGCCTAGACAAAGAAATGGCTTCATTGACTCAGCAAGTTGACCCAGATGTACTGTaGTTTTCCACAGAGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: CSHISGLDKEMASLTQQVDPDVL*FSTELP Trigger: TGGAAGCTCTGTGGAAAAGCACAGTACATCTGGGTC...AACTTGCTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCTAATGTGGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CCA 90 bp | CAGTGTACAGCTCTGGAAATATTAAGAACCCAAAACCTCAAACACAGCTCAGGAGCTCCACGGGCTCACTaGAAGAAGATCCTGAGAATG | + |
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Preference number: 4 (lower is better) Translates to: QCTALEILRTQNLKHSSGAPRAH*KKILRM Trigger: CATTCTCAGGATCTTCTTCCAGTGAGCCCGTGGAGC...TCCTGAGCTGTGTTTGAGGTTTTGGGTTCTTAATATTTCCAGAGCTGTACACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CCA 90 bp | CTTACATTGAGAAGAATGGGTATTATACCTGTCTTGAACCCTTCCCAAGAACACCTAGGCACATGGCCGTaGCATCGAAAGATGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LTLRRMGIIPVLNPSQEHLGTWP*HRKMAS Trigger: GGAAGCCATCTTTCGATGCCACGGCCATGTGCCTAG...GTGTTCTTGGGAAGGGTTCAAGACAGGTATAATACCCATTCTTCTCAATGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR GCA 90 bp | GCAATTAGCCAGTGTACAGCTCTGGAAATATTAAGAACCCAAAACCTCAAACACAGCTGCAGCTGTAGTTaGCAGGCTTGTAGATTAAAA | + |
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Preference number: 4 (lower is better) Translates to: AISQCTALEILRTQNLKHSCSCS*QACRLK Trigger: TTTTAATCTACAAGCCTGGCAACTACAGCTGCAGCT...GTGTTTGAGGTTTTGGGTTCTTAATATTTCCAGAGCTGTACACTGGCTAATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR TCA 90 bp | ATTGAGAAGAATGGGTATTATACCTGTCTTGAACCCTTCCCAAGAACACTTTTTTCCAGAGTCTATTGTTaGGATATTGTGCAGCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: IEKNGYYTCLEPFPRTLFSRVYC*DIVQLK Trigger: TTTGAGCTGCACAATATCTCAACAATAGACTCTGGA...AAAAAGTGTTCTTGGGAAGGGTTCAAGACAGGTATAATACCCATTCTTCTCAAT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CCA 90 bp | GACCCAGATGTACTGTGCTTTTCCACAGAGCTTCCAGCCTTGGCTTaGGTGGTGGCCCATTCACCCGCAGCTCCACGGGCTCACTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: DPDVLCFSTELPALA*VVAHSPAAPRAHWK Trigger: CTTCCAGTGAGCCCGTGGAGCTGCGGGTGAATGGGCCACCACCCAAGCCAAGGCTGGAAGCTCTGTGGAAAAGCACAGTACATCTGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS TCA 90 bp | TATACAGGCAGGCCACCAGGTGTGATCCAGTCGACTGGATCAGCATaGGCCAAGGGCCGAGGCAAGGGCTCTTTCCCTGTCACCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: YTGRPPGVIQSTGSA*AKGRGKGSFPVTST Trigger: TGTGGAGGTGACAGGGAAAGAGCCCTTGCCTCGGCCCTTGGCTCATGCTGATCCAGTCGACTGGATCACACCTGGTGGCCTGCCTGTATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS GCA 90 bp | GCCATCCACTCCTTCCTGCCTCAGCAGGTAGGTCACACCCCGCATTaGAACCTGGCACATCACGTATACAGGCAGGCCACCAGGTGTGAT | + |
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Preference number: 5 (lower is better) Translates to: AIHSFLPQQVGHTPH*NLAHHVYRQATRCD Trigger: ATCACACCTGGTGGCCTGCCTGTATACGTGATGTGCCAGGTTGCAATGCGGGGTGTGACCTACCTGCTGAGGCAGGAAGGAGTGGATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CCA 90 bp | GCACATCACGTATACAGGCAGGCCACCAGGTGTGATCCAGTCGACTaGATCAGCATGAGCCAAGGGCCGAGGCAAGGGCTCTTTCCCTGT | + |
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Preference number: 5 (lower is better) Translates to: AHHVYRQATRCDPVD*ISMSQGPRQGLFPC Trigger: ACAGGGAAAGAGCCCTTGCCTCGGCCCTTGGCTCATGCTGATCCAGTCGACTGGATCACACCTGGTGGCCTGCCTGTATACGTGATGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CCA 90 bp | TTCCTGACCCAGATGTACTGTGCTTTTCCACAGAGCTTCCAGCCTTaGCTTGGGTGGTGGCCCATTCACCCGCAGCTCCACGGGCTCACT | + |
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Preference number: 5 (lower is better) Translates to: FLTQMYCAFPQSFQP*LGWWPIHPQLHGLT Trigger: AGTGAGCCCGTGGAGCTGCGGGTGAATGGGCCACCACCCAAGCCAAGGCTGGAAGCTCTGTGGAAAAGCACAGTACATCTGGGTCAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CCA 90 bp | TTGGCTTGGGTGGTGGCCCATTCACCCGCAGCTCCACGGGCTCACTaGAAGAAGATCCTGAGAATGGCGGTGCCTGTTCCATGTAGATAC | + |
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Preference number: 5 (lower is better) Translates to: LAWVVAHSPAAPRAH*KKILRMAVPVPCRY Trigger: GTATCTACATGGAACAGGCACCGCCATTCTCAGGATCTTCTTCCAGTGAGCCCGTGGAGCTGCGGGTGAATGGGCCACCACCCAAGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CCA 90 bp | ATGTACTGTGCTTTTCCACAGAGCTTCCAGCCTTGGCTTGGGTGGTaGCCCATTCACCCGCAGCTCCACGGGCTCACTGGAAGAAGATCC | + |
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Preference number: 5 (lower is better) Translates to: MYCAFPQSFQPWLGW*PIHPQLHGLTGRRS Trigger: GGATCTTCTTCCAGTGAGCCCGTGGAGCTGCGGGTGAATGGGCCACCACCCAAGCCAAGGCTGGAAGCTCTGTGGAAAAGCACAGTACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CCA 90 bp | CAGATGTACTGTGCTTTTCCACAGAGCTTCCAGCCTTGGCTTGGGTaGTGGCCCATTCACCCGCAGCTCCACGGGCTCACTGGAAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: QMYCAFPQSFQPWLG*WPIHPQLHGLTGRR Trigger: TCTTCTTCCAGTGAGCCCGTGGAGCTGCGGGTGAATGGGCCACCACCCAAGCCAAGGCTGGAAGCTCTGTGGAAAAGCACAGTACATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS GCA 90 bp | CATGGCCGTGGCATCGAAAGATGGCTTCCTGACCCAGATGTACTGTaGTTTTCCACAGAGCTTCCAGCCTTGGCTTGGGTGGTGGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: HGRGIERWLPDPDVL*FSTELPALAWVVAH Trigger: ATGGGCCACCACCCAAGCCAAGGCTGGAAGCTCTGTGGAAAAGCACAGTACATCTGGGTCAGGAAGCCATCTTTCGATGCCACGGCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS TCA 90 bp | ATGCTGACCCTAGGCACATGGCCGTGGCATCGAAAGATGGCTTCCTaGCCCAGATGTACTGTGCTTTTCCACAGAGCTTCCAGCCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: MLTLGTWPWHRKMAS*PRCTVLFHRASSLG Trigger: GCCAAGGCTGGAAGCTCTGTGGAAAAGCACAGTACATCTGGGTCAGGAAGCCATCTTTCGATGCCACGGCCATGTGCCTAGGGTCAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CCA 90 bp | GAGGCAAGGGCTCTTTCCCTGTCACCTCCACAGCATTGCTTAGCATaGTCCACTTGTTCAGTGCTGGCAGGTGAATGTCAACAGGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: EARALSLSPPQHCLA*STCSVLAGECQQGV Trigger: AACCCCCTGTTGACATTCACCTGCCAGCACTGAACAAGTGGACCATGCTAAGCAATGCTGTGGAGGTGACAGGGAAAGAGCCCTTGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CAA 90 bp | TCATTGACTCAGCAAGTTGCCACAGGGCCTTTCCACACTGACCTTGGTGAAGCACCCTCCTTGCCTGAGTaGGAATTCAGCTGCATTCCG | + |
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Preference number: 5 (lower is better) Translates to: SLTQQVATGPFHTDLGEAPSLPE*EFSCIP Trigger: CGGAATGCAGCTGAATTCCAACTCAGGCAAGGAGGG...TGCTTCACCAAGGTCAGTGTGGAAAGGCCCTGTGGCAACTTGCTGAGTCAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CAA 90 bp | TGCAGCCACATTAGCGGCCTAGACAAAGAAATGGCTTCATTGACTCAGCAAGTTGCTTCCAGCCTTGGCTaGGGTGGTGGCCCATTCACC | + |
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Preference number: 5 (lower is better) Translates to: CSHISGLDKEMASLTQQVASSLG*GGGPFT Trigger: GGTGAATGGGCCACCACCCAAGCCAAGGCTGGAAGC...AACTTGCTGAGTCAATGAAGCCATTTCTTTGTCTAGGCCGCTAATGTGGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS GCA 90 bp | CAGAGGGTTCACCTGCTGCATGGGTTAGGTAGCTGCAGCTGTAGTTaGCAGGCTTGTAGATTAAAAAGCCAGCTGTTCCCTTGTGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: QRVHLLHGLGSCSCS*QACRLKSQLFPCAG Trigger: TCCAGCACAAGGGAACAGCTGGCTTTTTAATCTACAAGCCTGGCAACTACAGCTGCAGCTACCTAACCCATGCAGCAGGTGAACCCTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS GCA 90 bp | TTGTGCAGCTCAAAGACTGCTTCGGTCCCAGACGAATTCAGCATTTaGACCACAACTAATTCCGGTTTGCCCTGGCGTTGCAGGCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: LCSSKTASVPDEFSI*TTTNSGLPWRCRPK Trigger: CTTTGGCCTGCAACGCCAGGGCAAACCGGAATTAGTTGTGGTGCAAATGCTGAATTCGTCTGGGACCGAAGCAGTCTTTGAGCTGCACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS TCA 90 bp | TTCCCATCAAACACAGAGTGGGTGGAGCCTGTGAGGCATACATCTTaGTGGTCACAATATCACTGGGCTCAGAGGGTTCACCTGCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: FPSNTEWVEPVRHTS*WSQYHWAQRVHLLH Trigger: ATGCAGCAGGTGAACCCTCTGAGCCCAGTGATATTGTGACCATCAAGATGTATGCCTCACAGGCTCCACCCACTCTGTGTTTGATGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CAA 90 bp | TTGACTCAGCAAGTTGCCACAGGGCCTTTCCACACTGACCTTGGTGAAGCAATTAAGCCAGCTGTTCCCTaGTGCTGGACATCAGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: LTQQVATGPFHTDLGEAIKPAVP*CWTSGF Trigger: GAAACCTGATGTCCAGCACAAGGGAACAGCTGGCTT...AATTGCTTCACCAAGGTCAGTGTGGAAAGGCCCTGTGGCAACTTGCTGAGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CAA 90 bp | CTTACATTGAGAAGAATGGGTATTATACCTGTCTTGAACCCTTCCCAAGAACACACACCAGGGTCAGGTTaGCCCAGGGTTCCAGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LTLRRMGIIPVLNPSQEHTPGSG*PRVPAG Trigger: CCCTGCTGGAACCCTGGGCAAACCTGACCCTGGTGT...GTGTTCTTGGGAAGGGTTCAAGACAGGTATAATACCCATTCTTCTCAATGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS TCA 90 bp | CCTCTGACCAAACGTGCATGTATTTGTGCATCCGGTAGCGGCAGGTaGAAGGACCTGGGTTATCCAGTTCCTTCAAGTTCACATAGTACA | + |
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Preference number: 5 (lower is better) Translates to: PLTKRACICASGSGR*KDLGYPVPSSSHST Trigger: TGTACTATGTGAACTTGAAGGAACTGGATAACCCAGGTCCTTTCACCTGCCGCTACCGGATGCACAAATACATGCACGTTTGGTCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CAA 90 bp | CTTACATTGAGAAGAATGGGTATTATACCTGTCTTGAACCCTTCCCAAGAACACACAGAGCTTCCAGCCTaGGCTTGGGTGGTGGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: LTLRRMGIIPVLNPSQEHTELPA*AWVVAH Trigger: ATGGGCCACCACCCAAGCCAAGGCTGGAAGCTCTGT...GTGTTCTTGGGAAGGGTTCAAGACAGGTATAATACCCATTCTTCTCAATGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CAA 90 bp | CTTACATTGAGAAGAATGGGTATTATACCTGTCTTGAACCCTTCCCAAGAACACAGGTCACACCCCGCATaGCAACCTGGCACATCACGT | + |
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Preference number: 5 (lower is better) Translates to: LTLRRMGIIPVLNPSQEHRSHPA*QPGTSR Trigger: ACGTGATGTGCCAGGTTGCAATGCGGGGTGTGACCT...GTGTTCTTGGGAAGGGTTCAAGACAGGTATAATACCCATTCTTCTCAATGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CAA 90 bp | GCAATTAGCCAGTGTACAGCTCTGGAAATATTAAGAACCCAAAACCTCAAACACGCATTCCGAGGAGCTTaGCAGGCAAGGGTCTCATAT | + |
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Preference number: 5 (lower is better) Translates to: AISQCTALEILRTQNLKHAFRGA*QARVSY Trigger: ATATGAGACCCTTGCCTGCAAAGCTCCTCGGAATGC...GTGTTTGAGGTTTTGGGTTCTTAATATTTCCAGAGCTGTACACTGGCTAATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS-3UTR CAA 90 bp | ATTGAGAAGAATGGGTATTATACCTGTCTTGAACCCTTCCCAAGAACACTTTTTCAGCACCTTCCCTCCTaGCCTGAGTTGGAATTCAGC | + |
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Preference number: 5 (lower is better) Translates to: IEKNGYYTCLEPFPRTLFQHLPS*PELEFS Trigger: GCTGAATTCCAACTCAGGCAAGGAGGGAAGGTGCTG...AAAAAGTGTTCTTGGGAAGGGTTCAAGACAGGTATAATACCCATTCTTCTCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS GCA 72 bp | GGGCGGCAGGGCCGTATAGCGGCAGCTGTAGTTGCCTaGATGTTGGGGACCGACGAAGAGCAGCTTCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: GRQGRIAAAVVA*MLGTDEEQLQV Trigger: TACCTGAAGCTGCTCTTCGTCGGTCCCCAACATGCAGGCAACTACAGCTGCCGCTATACGGCCCTGCCGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CCA 72 bp | GCTTTTCCACAGAGCTTCCAGCCTTGGCTTGGGTGGTaGCCCATTCACCCGCAGCTCCACGGGCTCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: AFPQSFQPWLGW*PIHPQLHGLTG Trigger: TCCAGTGAGCCCGTGGAGCTGCGGGTGAATGGGCCACCACCCAAGCCAAGGCTGGAAGCTCTGTGGAAAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS TCA 72 bp | AGGCCACCAGGTGTGATCCAGTCGACTGGATCAGCATaGGCCAAGGGCCGAGGCAAGGGCTCTTTCCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RPPGVIQSTGSA*AKGRGKGSFPV Trigger: GACAGGGAAAGAGCCCTTGCCTCGGCCCTTGGCTCATGCTGATCCAGTCGACTGGATCACACCTGGTGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CCA 72 bp | TGTGCTTTTCCACAGAGCTTCCAGCCTTGGCTTGGGTaGTGGCCCATTCACCCGCAGCTCCACGGGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: CAFPQSFQPWLG*WPIHPQLHGLT Trigger: AGTGAGCCCGTGGAGCTGCGGGTGAATGGGCCACCACCCAAGCCAAGGCTGGAAGCTCTGTGGAAAAGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CCA 72 bp | GTACTGTGCTTTTCCACAGAGCTTCCAGCCTTGGCTTaGGTGGTGGCCCATTCACCCGCAGCTCCACGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VLCFSTELPALA*VVAHSPAAPRA Trigger: AGCCCGTGGAGCTGCGGGTGAATGGGCCACCACCCAAGCCAAGGCTGGAAGCTCTGTGGAAAAGCACAGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CAA 72 bp | TGTACTGTGCTTTTCCACAGAGCTTCCAGCCTTGGCTaGGGTGGTGGCCCATTCACCCGCAGCTCCACGGGC | + |
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Preference number: 6 (lower is better) Translates to: CTVLFHRASSLG*GGGPFTRSSTG Trigger: GCCCGTGGAGCTGCGGGTGAATGGGCCACCACCCAAGCCAAGGCTGGAAGCTCTGTGGAAAAGCACAGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CAA 90 bp | CTTCCTGACCCAGATGTACTGTGCTTTTCCACAGAGCTTCCAGCCTaGGCTTGGGTGGTGGCCCATTCACCCGCAGCTCCACGGGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: LPDPDVLCFSTELPA*AWVVAHSPAAPRAH Trigger: GTGAGCCCGTGGAGCTGCGGGTGAATGGGCCACCACCCAAGCCAAGGCTGGAAGCTCTGTGGAAAAGCACAGTACATCTGGGTCAGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS GCA 72 bp | TCCTTCCTGCCTCAGCAGGTAGGTCACACCCCGCATTaGAACCTGGCACATCACGTATACAGGCAGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: SFLPQQVGHTPH*NLAHHVYRQAT Trigger: GGTGGCCTGCCTGTATACGTGATGTGCCAGGTTGCAATGCGGGGTGTGACCTACCTGCTGAGGCAGGAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CAA 72 bp | CTCCTTCCTGCCTCAGCAGGTAGGTCACACCCCGCATaGCAACCTGGCACATCACGTATACAGGCAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LLPASAGRSHPA*QPGTSRIQAGH Trigger: GTGGCCTGCCTGTATACGTGATGTGCCAGGTTGCAATGCGGGGTGTGACCTACCTGCTGAGGCAGGAAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CCA 72 bp | CAGATGTACTGTGCTTTTCCACAGAGCTTCCAGCCTTaGCTTGGGTGGTGGCCCATTCACCCGCAGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: QMYCAFPQSFQP*LGWWPIHPQLH Trigger: GTGGAGCTGCGGGTGAATGGGCCACCACCCAAGCCAAGGCTGGAAGCTCTGTGGAAAAGCACAGTACATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CAA 72 bp | CCAGATGTACTGTGCTTTTCCACAGAGCTTCCAGCCTaGGCTTGGGTGGTGGCCCATTCACCCGCAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PDVLCFSTELPA*AWVVAHSPAAP Trigger: TGGAGCTGCGGGTGAATGGGCCACCACCCAAGCCAAGGCTGGAAGCTCTGTGGAAAAGCACAGTACATCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS TCA 72 bp | CACCCGCAGCTCCACGGGCTCACTGGAAGAAGATCCTaGGAATGGCGGTGCCTGTTCCATGTAGATACAGCT | + |
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Preference number: 6 (lower is better) Translates to: HPQLHGLTGRRS*EWRCLFHVDTA Trigger: AGCTGTATCTACATGGAACAGGCACCGCCATTCTCAGGATCTTCTTCCAGTGAGCCCGTGGAGCTGCGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS GCA 72 bp | ATTTGCACCACAACTAATTCCGGTTTGCCCTGGCGTTaGAGGCCAAAGCGCAGGCCGGATACGGGTGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: ICTTTNSGLPWR*RPKRRPDTGAV Trigger: TACTGCACCCGTATCCGGCCTGCGCTTTGGCCTGCAACGCCAGGGCAAACCGGAATTAGTTGTGGTGCAAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CAA 72 bp | CGAGGCAAGGGCTCTTTCCCTGTCACCTCCACAGCATaGCTTAGCATGGTCCACTTGTTCAGTGCTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RGKGSFPVTSTA*LSMVHLFSAGR Trigger: CCTGCCAGCACTGAACAAGTGGACCATGCTAAGCAATGCTGTGGAGGTGACAGGGAAAGAGCCCTTGCCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS GCA 72 bp | GAGGCAAGGGCTCTTTCCCTGTCACCTCCACAGCATTaGTTAGCATGGTCCACTTGTTCAGTGCTGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: EARALSLSPPQH*LAWSTCSVLAG Trigger: ACCTGCCAGCACTGAACAAGTGGACCATGCTAAGCAATGCTGTGGAGGTGACAGGGAAAGAGCCCTTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS TCA 72 bp | TTGCTTAGCATGGTCCACTTGTTCAGTGCTGGCAGGTaGATGTCAACAGGGGGTTCCACGCCACATCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLSMVHLFSAGR*MSTGGSTPHLQ Trigger: CTGCAGATGTGGCGTGGAACCCCCTGTTGACATTCACCTGCCAGCACTGAACAAGTGGACCATGCTAAGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS GCA 72 bp | CAGCACCTTCCCTCCTTGCCTGAGTTGGAATTCAGCTaGATTCCGAGGAGCTTTGCAGGCAAGGGTCTCATA | + |
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Preference number: 6 (lower is better) Translates to: QHLPSLPELEFS*IPRSFAGKGLI Trigger: TATGAGACCCTTGCCTGCAAAGCTCCTCGGAATGCAGCTGAATTCCAACTCAGGCAAGGAGGGAAGGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS GCA 72 bp | GGCATCGAAAGATGGCTTCCTGACCCAGATGTACTGTaGTTTTCCACAGAGCTTCCAGCCTTGGCTTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: GIERWLPDPDVL*FSTELPALAWV Trigger: CACCCAAGCCAAGGCTGGAAGCTCTGTGGAAAAGCACAGTACATCTGGGTCAGGAAGCCATCTTTCGATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CAA 90 bp | GGGGCTAAACCCATGAATTTTCAGCACCTTCCCTCCTTGCCTGAGTaGGAATTCAGCTGCATTCCGAGGAGCTTTGCAGGCAAGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GAKPMNFQHLPSLPE*EFSCIPRSFAGKGL Trigger: GAGACCCTTGCCTGCAAAGCTCCTCGGAATGCAGCTGAATTCCAACTCAGGCAAGGAGGGAAGGTGCTGAAAATTCATGGGTTTAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CAA 72 bp | CCCATGAATTTTCAGCACCTTCCCTCCTTGCCTGAGTaGGAATTCAGCTGCATTCCGAGGAGCTTTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PMNFQHLPSLPE*EFSCIPRSFAG Trigger: GCCTGCAAAGCTCCTCGGAATGCAGCTGAATTCCAACTCAGGCAAGGAGGGAAGGTGCTGAAAATTCATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CAA 90 bp | ATCTCTGGTGGGGCTAAACCCATGAATTTTCAGCACCTTCCCTCCTaGCCTGAGTTGGAATTCAGCTGCATTCCGAGGAGCTTTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: ISGGAKPMNFQHLPS*PELEFSCIPRSFAG Trigger: GCCTGCAAAGCTCCTCGGAATGCAGCTGAATTCCAACTCAGGCAAGGAGGGAAGGTGCTGAAAATTCATGGGTTTAGCCCCACCAGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS TCA 72 bp | AACACAGAGTGGGTGGAGCCTGTGAGGCATACATCTTaGTGGTCACAATATCACTGGGCTCAGAGGGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: NTEWVEPVRHTS*WSQYHWAQRVH Trigger: GTGAACCCTCTGAGCCCAGTGATATTGTGACCATCAAGATGTATGCCTCACAGGCTCCACCCACTCTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CCA 72 bp | GCTCTTTCCCTGTCACCTCCACAGCATTGCTTAGCATaGTCCACTTGTTCAGTGCTGGCAGGTGAATGTCAA | + |
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Preference number: 6 (lower is better) Translates to: ALSLSPPQHCLA*STCSVLAGECQ Trigger: TTGACATTCACCTGCCAGCACTGAACAAGTGGACCATGCTAAGCAATGCTGTGGAGGTGACAGGGAAAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS CAA 72 bp | AAACACAGAGTGGGTGGAGCCTGTGAGGCATACATCTaGATGGTCACAATATCACTGGGCTCAGAGGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: KHRVGGACEAYI*MVTISLGSEGS Trigger: TGAACCCTCTGAGCCCAGTGATATTGTGACCATCAAGATGTATGCCTCACAGGCTCCACCCACTCTGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS TCA 72 bp | GTAGTTTCCCATCAAACACAGAGTGGGTGGAGCCTGTaGGGCATACATCTTGATGGTCACAATATCACTGGG | + |
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Preference number: 6 (lower is better) Translates to: VVSHQTQSGWSL*GIHLDGHNITG Trigger: CCCAGTGATATTGTGACCATCAAGATGTATGCCTCACAGGCTCCACCCACTCTGTGTTTGATGGGAAACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096418.5 |
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| CDS TCA 72 bp | AAACGTGCATGTATTTGTGCATCCGGTAGCGGCAGGTaGAAGGACCTGGGTTATCCAGTTCCTTCAAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: KRACICASGSGR*KDLGYPVPSSS Trigger: TGAACTTGAAGGAACTGGATAACCCAGGTCCTTTCACCTGCCGCTACCGGATGCACAAATACATGCACGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096418.5 ENSMUST00000228632.2 |
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| CDS CCA 72 bp | GTATTTGTGCATCCGGTAGCGGCAGGTGAAAGGACCTaGGTTATCCAGTTCCTTCAAGTTCACATAGTACAG | + |
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Preference number: 6 (lower is better) Translates to: VFVHPVAAGERT*VIQFLQVHIVQ Trigger: CTGTACTATGTGAACTTGAAGGAACTGGATAACCCAGGTCCTTTCACCTGCCGCTACCGGATGCACAAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096418.5 ENSMUST00000228632.2 |
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