Pregenerated sensors for COX8A (Homo sapiens)
Ensembl gene IDs: ENSG00000176340Ensembl transcript IDs: ENST00000314133.4
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGACATCAAGAGGTCATGATTGCAGAAGAGGTGACTGGAATTGAATaGCATGATCCAGGGGAGGCCGGCCACAAATGCAGTAACATGACC | + |
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Preference number: 1 (lower is better) Translates to: RHQEVMIAEEVTGIE*HDPGEAGHKCSNMT Trigger: GGTCATGTTACTGCATTTGTGGCCGGCCTCCCCTGGATCATGTCATTCAATTCCAGTCACCTCTTCTGCAATCATGACCTCTTGATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| 3UTR-3UTR TCA 90 bp | CATGATCCAGGGGAGGCCGGCCACAAATGCAGTAACATGACCAGGATGGGCCGGGGTCAGGTCACAGTGTaGGGGACAGAACGGACCCCT | + |
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Preference number: 2 (lower is better) Translates to: HDPGEAGHKCSNMTRMGRGQVTV*GTERTP Trigger: AGGGGTCCGTTCTGTCCCTCACACTGTGACCTGACC...CCGGCCCATCCTGGTCATGTTACTGCATTTGTGGCCGGCCTCCCCTGGATCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| 3UTR-3UTR CCA 90 bp | CCCAAGGAGGTCACCATGGAGACATCAAGAGGTCATGATTGCAGAAGAGGTGACACCAGGATGGGCCGGTaGGGCTGGTCAGGTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: PKEVTMETSRGHDCRRGDTRMGR*GWSGHS Trigger: ACTGTGACCTGACCAGCCCCACCGGCCCATCCTGGT...GTCACCTCTTCTGCAATCATGACCTCTTGATGTCTCCATGGTGACCTCCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| 3UTR CCA 72 bp | AAATGCAGTAACATGACCAGGATGGGCCGGTGGGGCTaGTCAGGTCACAGTGTGAGGGACAGAACGGACCCC | + |
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Preference number: 3 (lower is better) Translates to: KCSNMTRMGRWG*SGHSVRDRTDP Trigger: GGGGTCCGTTCTGTCCCTCACACTGTGACCTGACCAGCCCCACCGGCCCATCCTGGTCATGTTACTGCATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| 3UTR CCA 72 bp | GGCCACAAATGCAGTAACATGACCAGGATGGGCCGGTaGGGCTGGTCAGGTCACAGTGTGAGGGACAGAACG | + |
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Preference number: 3 (lower is better) Translates to: GHKCSNMTRMGR*GWSGHSVRDRT Trigger: CGTTCTGTCCCTCACACTGTGACCTGACCAGCCCCACCGGCCCATCCTGGTCATGTTACTGCATTTGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| 3UTR TCA 72 bp | GAGGTCATGATTGCAGAAGAGGTGACTGGAATTGAATaGCATGATCCAGGGGAGGCCGGCCACAAATGCAGT | + |
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Preference number: 3 (lower is better) Translates to: EVMIAEEVTGIE*HDPGEAGHKCS Trigger: ACTGCATTTGTGGCCGGCCTCCCCTGGATCATGTCATTCAATTCCAGTCACCTCTTCTGCAATCATGACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS-3UTR TCA 90 bp | GGGGAGGCCGGCCACAAATGCAGTAACATGACCAGGATGGGCCGGTGGGGCTGGGTAGGTCTCCAGGTGTaGCAGGATCCAGCCCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GEAGHKCSNMTRMGRWGWVGLQV*QDPARW Trigger: CCAGCGGGCTGGATCCTGTCACACCTGGAGACCTAC...CCAGCCCCACCGGCCCATCCTGGTCATGTTACTGCATTTGTGGCCGGCCTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS-3UTR CCA 90 bp | ATGACCAGGATGGGCCGGTGGGGCTGGTCAGGTCACAGTGTGAGGGACAGAACGGCAACGAATGGATCTTaGCGCGCGGCACTGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: MTRMGRWGWSGHSVRDRTATNGS*RAALGA Trigger: GGCTCCCAGTGCCGCGCGCCAAGATCCATTCGTTGC...CGTTCTGTCCCTCACACTGTGACCTGACCAGCCCCACCGGCCCATCCTGGTCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS-3UTR CCA 90 bp | CATGACCAGGATGGGCCGGTGGGGCTGGTCAGGTCACAGTGTGAGGGACAGAACTCCGGCGGCAACGAATaGATCTTGGCGCGCGGCACT | + |
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Preference number: 4 (lower is better) Translates to: HDQDGPVGLVRSQCEGQNSGGNE*ILARGT Trigger: AGTGCCGCGCGCCAAGATCCATTCGTTGCCGCCGGA...GTTCTGTCCCTCACACTGTGACCTGACCAGCCCCACCGGCCCATCCTGGTCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS-3UTR CCA 90 bp | CATGACCAGGATGGGCCGGTGGGGCTGGTCAGGTCACAGTGTGAGGGACAGAACCAGGATCCAGCCCGCTaGCAGGAGGAAGGTCACGAA | + |
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Preference number: 4 (lower is better) Translates to: HDQDGPVGLVRSQCEGQNQDPAR*QEEGHE Trigger: TTCGTGACCTTCCTCCTGCCAGCGGGCTGGATCCTG...GTTCTGTCCCTCACACTGTGACCTGACCAGCCCCACCGGCCCATCCTGGTCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS-3UTR CCA 90 bp | CATGATCCAGGGGAGGCCGGCCACAAATGCAGTAACATGACCAGGATGGGCCGGACCAGGATGGGCCGGTaGGGCTGGTCAGGTCACAGT | + |
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Preference number: 4 (lower is better) Translates to: HDPGEAGHKCSNMTRMGRTRMGR*GWSGHS Trigger: ACTGTGACCTGACCAGCCCCACCGGCCCATCCTGGT...CCGGCCCATCCTGGTCATGTTACTGCATTTGTGGCCGGCCTCCCCTGGATCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS-3UTR TCA 90 bp | AGGATGGGCCGGTGGGGCTGGTCAGGTCACAGTGTGAGGGACAGAACGGACCCCGTGACTGGAATTGAATaGCATGATCCAGGGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RMGRWGWSGHSVRDRTDPVTGIE*HDPGEA Trigger: GGCCTCCCCTGGATCATGTCATTCAATTCCAGTCAC...GGGGTCCGTTCTGTCCCTCACACTGTGACCTGACCAGCCCCACCGGCCCATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS-3UTR GCA 90 bp | CCAGGGGAGGCCGGCCACAAATGCAGTAACATGACCAGGATGGGCCGGTGGGGCGAGGCCGGCCACAAATaGAGTAACATGACCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: PGEAGHKCSNMTRMGRWGEAGHK*SNMTRM Trigger: CATCCTGGTCATGTTACTGCATTTGTGGCCGGCCTC...GCCCCACCGGCCCATCCTGGTCATGTTACTGCATTTGTGGCCGGCCTCCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS-3UTR CCA 90 bp | CCCCACCAAGCAGGGTCAGTGACCCCCAAGGAGGTCACCATGGAGACATCAAGAATGGGCCGGTGGGGCTaGTCAGGTCACAGTGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: PHQAGSVTPKEVTMETSRMGRWG*SGHSVR Trigger: CCTCACACTGTGACCTGACCAGCCCCACCGGCCCAT...TCTTGATGTCTCCATGGTGACCTCCTTGGGGGTCACTGACCCTGCTTGGTGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS-3UTR GCA 90 bp | CCAGGGGAGGCCGGCCACAAATGCAGTAACATGACCAGGATGGGCCGGTGGGGCTCAAGAGGTCATGATTaGAGAAGAGGTGACTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: PGEAGHKCSNMTRMGRWGSRGHD*RRGDWN Trigger: ATTCCAGTCACCTCTTCTGCAATCATGACCTCTTGA...GCCCCACCGGCCCATCCTGGTCATGTTACTGCATTTGTGGCCGGCCTCCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS-3UTR TCA 90 bp | CCCAAGGAGGTCACCATGGAGACATCAAGAGGTCATGATTGCAGAAGAGGTGACGCGTCAGGACGGACATaGTGGCACGGAGTACACCAC | + |
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Preference number: 4 (lower is better) Translates to: PKEVTMETSRGHDCRRGDASGRT*WHGVHH Trigger: GTGGTGTACTCCGTGCCATCATGTCCGTCCTGACGC...GTCACCTCTTCTGCAATCATGACCTCTTGATGTCTCCATGGTGACCTCCTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS-3UTR TCA 90 bp | AGGTCACCATGGAGACATCAAGAGGTCATGATTGCAGAAGAGGTGACTGGAATTGGTCAGGTCACAGTGTaGGGGACAGAACGGACCCCT | + |
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Preference number: 4 (lower is better) Translates to: RSPWRHQEVMIAEEVTGIGQVTV*GTERTP Trigger: AGGGGTCCGTTCTGTCCCTCACACTGTGACCTGACC...AATTCCAGTCACCTCTTCTGCAATCATGACCTCTTGATGTCTCCATGGTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS-3UTR TCA 90 bp | AGGTCACCATGGAGACATCAAGAGGTCATGATTGCAGAAGAGGTGACTGGAATTACCAAGCAGGGTCAGTaGCCCCCAAGGAGGTCACCA | + |
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Preference number: 4 (lower is better) Translates to: RSPWRHQEVMIAEEVTGITKQGQ*PPRRSP Trigger: TGGTGACCTCCTTGGGGGTCACTGACCCTGCTTGGT...AATTCCAGTCACCTCTTCTGCAATCATGACCTCTTGATGTCTCCATGGTGACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS-3UTR TCA 90 bp | AGGTCACCATGGAGACATCAAGAGGTCATGATTGCAGAAGAGGTGACTGGAATTCAACGGCCAATTCCATaGTCCCAAGCTTCCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: RSPWRHQEVMIAEEVTGIQRPIP*SQASPP Trigger: CGGAGGGGAAGCTTGGGATCATGGAATTGGCCGTTG...AATTCCAGTCACCTCTTCTGCAATCATGACCTCTTGATGTCTCCATGGTGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS-3UTR CCA 90 bp | AGGTCACCATGGAGACATCAAGAGGTCATGATTGCAGAAGAGGTGACTGGAATTCCAAGGAGGTCACCATaGAGACATCAAGAGGTCATG | + |
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Preference number: 4 (lower is better) Translates to: RSPWRHQEVMIAEEVTGIPRRSP*RHQEVM Trigger: CATGACCTCTTGATGTCTCCATGGTGACCTCCTTGG...AATTCCAGTCACCTCTTCTGCAATCATGACCTCTTGATGTCTCCATGGTGACCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS CCA 90 bp | AAGCTTCCCCTCCGGCGGCAACGAATGGATCTTGGCGCGCGGCACTaGGAGCCGCCGGGCCGAGCCTGTCAAGCCCCGCAGCAGCAGCGG | + |
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Preference number: 5 (lower is better) Translates to: KLPLRRQRMDLGARH*EPPGRACQAPQQQR Trigger: CCGCTGCTGCTGCGGGGCTTGACAGGCTCGGCCCGGCGGCTCCCAGTGCCGCGCGCCAAGATCCATTCGTTGCCGCCGGAGGGGAAGCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS CCA 90 bp | ACGGCCAATTCCATGATCCCAAGCTTCCCCTCCGGCGGCAACGAATaGATCTTGGCGCGCGGCACTGGGAGCCGCCGGGCCGAGCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: TANSMIPSFPSGGNE*ILARGTGSRRAEPV Trigger: GACAGGCTCGGCCCGGCGGCTCCCAGTGCCGCGCGCCAAGATCCATTCGTTGCCGCCGGAGGGGAAGCTTGGGATCATGGAATTGGCCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS-3UTR CAA 90 bp | ATGACCAGGATGGGCCGGTGGGGCTGGTCAGGTCACAGTGTGAGGGACAGAACGGGCAACGAATGGATCTaGGCGCGCGGCACTGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: MTRMGRWGWSGHSVRDRTGNEWI*ARGTGS Trigger: GCTCCCAGTGCCGCGCGCCAAGATCCATTCGTTGCC...CGTTCTGTCCCTCACACTGTGACCTGACCAGCCCCACCGGCCCATCCTGGTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS CCA 90 bp | GGGGAGGCCGGCCACAAATGCAGTAACATGACCAGGATGGGCCGGTaGGGCTGGTCAGGTCACAGTGTGAGGGACAGAACGGACCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: GEAGHKCSNMTRMGR*GWSGHSVRDRTDPF Trigger: GAAGGGGTCCGTTCTGTCCCTCACACTGTGACCTGACCAGCCCCACCGGCCCATCCTGGTCATGTTACTGCATTTGTGGCCGGCCTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS TCA 90 bp | ACAGAACGGACCCCTTCACTCTGGCCTCCTGTAGGTCTCCAGGTGTaGCAGGATCCAGCCCGCTGGCAGGAGGAAGGTCACGAAGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: TERTPSLWPPVGLQV*QDPARWQEEGHEAG Trigger: TCCTGCTTCGTGACCTTCCTCCTGCCAGCGGGCTGGATCCTGTCACACCTGGAGACCTACAGGAGGCCAGAGTGAAGGGGTCCGTTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS CCA 90 bp | GCCGGCCACAAATGCAGTAACATGACCAGGATGGGCCGGTGGGGCTaGTCAGGTCACAGTGTGAGGGACAGAACGGACCCCTTCACTCTG | + |
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Preference number: 5 (lower is better) Translates to: AGHKCSNMTRMGRWG*SGHSVRDRTDPFTL Trigger: CAGAGTGAAGGGGTCCGTTCTGTCCCTCACACTGTGACCTGACCAGCCCCACCGGCCCATCCTGGTCATGTTACTGCATTTGTGGCCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS CCA 72 bp | CTCCGGCGGCAACGAATGGATCTTGGCGCGCGGCACTaGGAGCCGCCGGGCCGAGCCTGTCAAGCCCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: LRRQRMDLGARH*EPPGRACQAPQ Trigger: CTGCGGGGCTTGACAGGCTCGGCCCGGCGGCTCCCAGTGCCGCGCGCCAAGATCCATTCGTTGCCGCCGGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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| CDS CAA 90 bp | AATTCCATGATCCCAAGCTTCCCCTCCGGCGGCAACGAATGGATCTaGGCGCGCGGCACTGGGAGCCGCCGGGCCGAGCCTGTCAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: NSMIPSFPSGGNEWI*ARGTGSRRAEPVKP Trigger: GGGCTTGACAGGCTCGGCCCGGCGGCTCCCAGTGCCGCGCGCCAAGATCCATTCGTTGCCGCCGGAGGGGAAGCTTGGGATCATGGAATT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314133.4 |
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