Pregenerated sensors for COX7C (Homo sapiens)
Ensembl gene IDs: ENSG00000127184Ensembl transcript IDs: ENST00000509578.1, ENST00000510447.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGCTTCTCAACCTCAGCACCACTGGTAATTTTGCCCCCAAGTTGGAACGATCAAGTTTCCCAACATGGCTaGGTTGGTGAGGCACAGATT | + |
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Preference number: 2 (lower is better) Translates to: GFSTSAPLVILPPSWNDQVSQHG*VGEAQI Trigger: AATCTGTGCCTCACCAACTCAGCCATGTTGGGAAAC...TTGATCGTTCCAACTTGGGGGCAAAATTACCAGTGGTGCTGAGGTTGAGAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| 3UTR-3UTR GCA 90 bp | GACTCCTTTGAGCATATATTAACATATCCCCTTGACACAAGGCTTCTCAACCTCTCTGCAACAAGAAACTaGCTGGGCAAGAGTCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: DSFEHILTYPLDTRLLNLSATRN*LGKSPG Trigger: ACCAGGACTCTTGCCCAGGCAGTTTCTTGTTGCAGA...GAGGTTGAGAAGCCTTGTGTCAAGGGGATATGTTAATATATGCTCAAAGGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| 3UTR CAA 90 bp | CATCTCTGTGTCTCAGATGGGGTTACTATCATCCGCCTCACAAGCTaGCTAGAGAACATGAGATATCGATGTAAAGTGTACCTGATAAGC | + |
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Preference number: 2 (lower is better) Translates to: HLCVSDGVTIIRLTS*LENMRYRCKVYLIS Trigger: GCTTATCAGGTACACTTTACATCGATATCTCATGTTCTCTAGCAAGCTTGTGAGGCGGATGATAGTAACCCCATCTGAGACACAGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| 3UTR CAA 90 bp | GCCTGGGCAAGAGTCCTGGTCCACCATTATACTAGTTATGAGATGTaGAACAACTTAACATCTCTGTGTCTCAGATGGGGTTACTATCAT | + |
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Preference number: 2 (lower is better) Translates to: AWARVLVHHYTSYEM*NNLTSLCLRWGYYH Trigger: ATGATAGTAACCCCATCTGAGACACAGAGATGTTAAGTTGTTCAACATCTCATAACTAGTATAATGGTGGACCAGGACTCTTGCCCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| 3UTR-3UTR GCA 90 bp | TCATCACATGCACCGCAACCTTTCCGCATTAGTAGCTTGGATAAGTTATTCCCCAAAAATGTCTCACATTaGCAAATGCCCCATTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: SSHAPQPFRISSLDKLFPKNVSH*QMPHCV Trigger: AACACAATGGGGCATTTGGCAATGTGAGACATTTTT...GGGGAATAACTTATCCAAGCTACTAATGCGGAAAGGTTGCGGTGCATGTGATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| 3UTR TCA 72 bp | ATTAATCAGTTTATCAGTTTTACCTGGTTAAAAGTGTaGGTTCTGCAACAAGAAACTGCCTGGGCAAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: INQFISFTWLKV*VLQQETAWARV Trigger: GACTCTTGCCCAGGCAGTTTCTTGTTGCAGAACTCACACTTTTAACCAGGTAAAACTGATAAACTGATTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR TCA 90 bp | GGCTTCTCAACCTCAGCACCACTGGTAATTTTGCCCCCAAGTTGGAACGATCAAGAAAGGCGCAGAGAATaGGGACAGATGAAATGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GFSTSAPLVILPPSWNDQERRRE*GQMKWR Trigger: CCGCCATTTCATCTGTCCTCATTCTCTGCGCCTTTC...TTGATCGTTCCAACTTGGGGGCAAAATTACCAGTGGTGCTGAGGTTGAGAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR GCA 90 bp | GGCTTCTCAACCTCAGCACCACTGGTAATTTTGCCCCCAAGTTGGAACGATCAATCTGCAACAAGAAACTaGCTGGGCAAGAGTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: GFSTSAPLVILPPSWNDQSATRN*LGKSPG Trigger: ACCAGGACTCTTGCCCAGGCAGTTTCTTGTTGCAGA...TTGATCGTTCCAACTTGGGGGCAAAATTACCAGTGGTGCTGAGGTTGAGAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR TCA 90 bp | TCATCACATGCACCGCAACCTTTCCGCATTAGTAGCTTGGATAAGTTATTCCCCACATGGCTGAGTTGGTaGGGCACAGATTTACAATTG | + |
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Preference number: 4 (lower is better) Translates to: SSHAPQPFRISSLDKLFPTWLSW*GTDLQL Trigger: CAATTGTAAATCTGTGCCTCACCAACTCAGCCATGT...GGGGAATAACTTATCCAAGCTACTAATGCGGAAAGGTTGCGGTGCATGTGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| 3UTR CAA 72 bp | ACACAAGGCTTCTCAACCTCAGCACCACTGGTAATTTaGCCCCCAAGTTGGAACGATCAAAAATGTCTCACA | + |
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Preference number: 4 (lower is better) Translates to: TQGFSTSAPLVI*PPSWNDQKCLT Trigger: TGTGAGACATTTTTGATCGTTCCAACTTGGGGGCAAAATTACCAGTGGTGCTGAGGTTGAGAAGCCTTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR TCA 90 bp | TTGAACAACTTAACATCTCTGTGTCTCAGATGGGGTTACTATCATCCGCCTCACTCCCCCTCTAAACTATaGCACTCTTTCCAATCATCC | + |
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Preference number: 4 (lower is better) Translates to: LNNLTSLCLRWGYYHPPHSPSKL*HSFQSS Trigger: GGATGATTGGAAAGAGTGTCATAGTTTAGAGGGGGA...GTGAGGCGGATGATAGTAACCCCATCTGAGACACAGAGATGTTAAGTTGTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR TCA 90 bp | TTGAACAACTTAACATCTCTGTGTCTCAGATGGGGTTACTATCATCCGCCTCACGCTAACCTTCCAATATaGACGACTCCTTTGAGCATA | + |
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Preference number: 4 (lower is better) Translates to: LNNLTSLCLRWGYYHPPHANLPI*TTPLSI Trigger: TATGCTCAAAGGAGTCGTTCATATTGGAAGGTTAGC...GTGAGGCGGATGATAGTAACCCCATCTGAGACACAGAGATGTTAAGTTGTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR CCA 90 bp | GTATCAAGGAGCACTAGAAGGGTTTTATCTTCAGGGATTTTTCACAACTTAAACCAACAAGAAACTGCCTaGGCAAGAGTCCTGGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: VSRSTRRVLSSGIFHNLNQQETA*ARVLVH Trigger: GTGGACCAGGACTCTTGCCCAGGCAGTTTCTTGTTG...GTTTAAGTTGTGAAAAATCCCTGAAGATAAAACCCTTCTAGTGCTCCTTGATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR TCA 90 bp | AGTTATGAGATGTTGAACAACTTAACATCTCTGTGTCTCAGATGGGGTTACTATGTTTCCCAACATGGCTaGGTTGGTGAGGCACAGATT | + |
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Preference number: 4 (lower is better) Translates to: SYEMLNNLTSLCLRWGYYVSQHG*VGEAQI Trigger: AATCTGTGCCTCACCAACTCAGCCATGTTGGGAAAC...ATAGTAACCCCATCTGAGACACAGAGATGTTAAGTTGTTCAACATCTCATAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR GCA 90 bp | TTGAACAACTTAACATCTCTGTGTCTCAGATGGGGTTACTATCATCCGCCTCACTCATTCATACTGATTTaGTTCATCACATGCACCGCA | + |
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Preference number: 4 (lower is better) Translates to: LNNLTSLCLRWGYYHPPHSFILI*FITCTA Trigger: TGCGGTGCATGTGATGAAGCAAATCAGTATGAATGA...GTGAGGCGGATGATAGTAACCCCATCTGAGACACAGAGATGTTAAGTTGTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR TCA 90 bp | ATAGGTTTACAACTAGTCTCCACCAATGCCACATCTACACATAACCTCAGGAATATTAACATATCCCCTTaGCACAAGGCTTCTCAACCT | + |
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Preference number: 4 (lower is better) Translates to: IGLQLVSTNATSTHNLRNINISP*HKASQP Trigger: AGGTTGAGAAGCCTTGTGTCAAGGGGATATGTTAAT...ATTCCTGAGGTTATGTGTAGATGTGGCATTGGTGGAGACTAGTTGTAAACCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR GCA 90 bp | TATGTATCAAGGAGCACTAGAAGGGTTTTATCTTCAGGGATTTTTCACAACTTAATTTGCTTCATCACATaGACCGCAACCTTTCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: YVSRSTRRVLSSGIFHNLICFIT*TATFPH Trigger: ATGCGGAAAGGTTGCGGTGCATGTGATGAAGCAAAT...TAAGTTGTGAAAAATCCCTGAAGATAAAACCCTTCTAGTGCTCCTTGATACATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR GCA 90 bp | GTATCAAGGAGCACTAGAAGGGTTTTATCTTCAGGGATTTTTCACAACTTAAACAAAAATGTCTCACATTaGCAAATGCCCCATTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: VSRSTRRVLSSGIFHNLNKNVSH*QMPHCV Trigger: AACACAATGGGGCATTTGGCAATGTGAGACATTTTT...GTTTAAGTTGTGAAAAATCCCTGAAGATAAAACCCTTCTAGTGCTCCTTGATAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS CCA 90 bp | TCACTGGTCCTTGGGCTAAGTGGAATGCTAGTCTGCGTCTCAGCCTaGTTTCTGGCTATCATCTCCCACGCCACAGCCCGGAGGCGGCCT | + |
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Preference number: 5 (lower is better) Translates to: SLVLGLSGMLVCVSA*FLAIISHATARRRP Trigger: AGGCCGCCTCCGGGCTGTGGCGTGGGAGATGATAGCCAGAAACCAGGCTGAGACGCAGACTAGCATTCCACTTAGCCCAAGGACCAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510447.1 |
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| CDS GCA 90 bp | TGCCCAGCTTCCTCACTGGTCCTTGGGCTAAGTGGAATGCTAGTCTaGGTCTCAGCCTGGTTTCTGGCTATCATCTCCCACGCCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: CPASSLVLGLSGMLV*VSAWFLAIISHATA Trigger: GGCTGTGGCGTGGGAGATGATAGCCAGAAACCAGGCTGAGACGCAGACTAGCATTCCACTTAGCCCAAGGACCAGTGAGGAAGCTGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510447.1 |
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| CDS GCA 90 bp | AAAATGGCAAATTCTGCCCATTCCTTTAGCGGCTACGCGCTAGGATaGCCAGCTTCCTCACTGGTCCTTGGGCTAAGTGGAATGCTAGTC | + |
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Preference number: 5 (lower is better) Translates to: KMANSAHSFSGYALG*PASSLVLGLSGMLV Trigger: GACTAGCATTCCACTTAGCCCAAGGACCAGTGAGGAAGCTGGGCATCCTAGCGCGTAGCCGCTAAAGGAATGGGCAGAATTTGCCATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510447.1 |
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| CDS-3UTR CAA 90 bp | GGCTTCTCAACCTCAGCACCACTGGTAATTTTGCCCCCAAGTTGGAACGATCAATTCATTCATACTGATTaGCTTCATCACATGCACCGC | + |
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Preference number: 5 (lower is better) Translates to: GFSTSAPLVILPPSWNDQFIHTD*LHHMHR Trigger: GCGGTGCATGTGATGAAGCAAATCAGTATGAATGAA...TTGATCGTTCCAACTTGGGGGCAAAATTACCAGTGGTGCTGAGGTTGAGAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR CAA 90 bp | ATAGGTTTACAACTAGTCTCCACCAATGCCACATCTACACATAACCTCAGGAATGCACCACTGGTAATTTaGCCCCCAAGTTGGAACGAT | + |
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Preference number: 5 (lower is better) Translates to: IGLQLVSTNATSTHNLRNAPLVI*PPSWND Trigger: ATCGTTCCAACTTGGGGGCAAAATTACCAGTGGTGC...ATTCCTGAGGTTATGTGTAGATGTGGCATTGGTGGAGACTAGTTGTAAACCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR CAA 90 bp | TTGAACAACTTAACATCTCTGTGTCTCAGATGGGGTTACTATCATCCGCCTCACTTCCGCATTAGTAGCTaGGATAAGTTATTCCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: LNNLTSLCLRWGYYHPPHFRISS*DKLFPL Trigger: GAGGGGGAATAACTTATCCAAGCTACTAATGCGGAA...GTGAGGCGGATGATAGTAACCCCATCTGAGACACAGAGATGTTAAGTTGTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR CAA 90 bp | GTATCAAGGAGCACTAGAAGGGTTTTATCTTCAGGGATTTTTCACAACTTAAACCCCAACATGGCTGAGTaGGTGAGGCACAGATTTACA | + |
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Preference number: 5 (lower is better) Translates to: VSRSTRRVLSSGIFHNLNPNMAE*VRHRFT Trigger: TGTAAATCTGTGCCTCACCAACTCAGCCATGTTGGG...GTTTAAGTTGTGAAAAATCCCTGAAGATAAAACCCTTCTAGTGCTCCTTGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR CAA 90 bp | GACTCCTTTGAGCATATATTAACATATCCCCTTGACACAAGGCTTCTCAACCTCCAAAAATGTCTCACATaGCCAAATGCCCCATTGTGT | + |
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Preference number: 5 (lower is better) Translates to: DSFEHILTYPLDTRLLNLQKCLT*PNAPLC Trigger: ACACAATGGGGCATTTGGCAATGTGAGACATTTTTG...GAGGTTGAGAAGCCTTGTGTCAAGGGGATATGTTAATATATGCTCAAAGGAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS-3UTR CAA 90 bp | GTATCAAGGAGCACTAGAAGGGTTTTATCTTCAGGGATTTTTCACAACTTAAACTTGCCAAATGCCCCATaGTGTTGTAAAATCATCCTC | + |
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Preference number: 5 (lower is better) Translates to: VSRSTRRVLSSGIFHNLNLPNAP*CCKIIL Trigger: GAGGATGATTTTACAACACAATGGGGCATTTGGCAA...GTTTAAGTTGTGAAAAATCCCTGAAGATAAAACCCTTCTAGTGCTCCTTGATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000509578.1 |
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| CDS CCA 72 bp | CTTGGGCTAAGTGGAATGCTAGTCTGCGTCTCAGCCTaGTTTCTGGCTATCATCTCCCACGCCACAGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: LGLSGMLVCVSA*FLAIISHATAR Trigger: CCGGGCTGTGGCGTGGGAGATGATAGCCAGAAACCAGGCTGAGACGCAGACTAGCATTCCACTTAGCCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510447.1 |
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| CDS CCA 72 bp | CTACGCGCTAGGATGCCCAGCTTCCTCACTGGTCCTTaGGCTAAGTGGAATGCTAGTCTGCGTCTCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LRARMPSFLTGP*AKWNASLRLSL Trigger: CAGGCTGAGACGCAGACTAGCATTCCACTTAGCCCAAGGACCAGTGAGGAAGCTGGGCATCCTAGCGCGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510447.1 |
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| CDS GCA 72 bp | AATTCTGCCCATTCCTTTAGCGGCTACGCGCTAGGATaGCCAGCTTCCTCACTGGTCCTTGGGCTAAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: NSAHSFSGYALG*PASSLVLGLSG Trigger: TCCACTTAGCCCAAGGACCAGTGAGGAAGCTGGGCATCCTAGCGCGTAGCCGCTAAAGGAATGGGCAGAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510447.1 |
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| CDS GCA 72 bp | TCCTCACTGGTCCTTGGGCTAAGTGGAATGCTAGTCTaGGTCTCAGCCTGGTTTCTGGCTATCATCTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SSLVLGLSGMLV*VSAWFLAIISH Trigger: GTGGGAGATGATAGCCAGAAACCAGGCTGAGACGCAGACTAGCATTCCACTTAGCCCAAGGACCAGTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510447.1 |
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