Pregenerated sensors for COX7B (Homo sapiens)
Ensembl gene IDs: ENSG00000131174Ensembl transcript IDs: ENST00000475465.1, ENST00000650309.2
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCACTGACTTTGGTCCATTTGATGAGAAACTAGGACATATGCCATaGCAGCATACTTCTAGCACTCTATGTAATAAGCAAAAGATAATT | + |
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Preference number: 1 (lower is better) Translates to: ITDFGPFDEKLGHMP*QHTSSTLCNKQKII Trigger: AATTATCTTTTGCTTATTACATAGAGTGCTAGAAGTATGCTGTCATGGCATATGTCCTAGTTTCTCATCAAATGGACCAAAGTCAGTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650309.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTGTGATCCAGTAAGCAATTTATTACTGGGAATGTTAAGAACAGAAGATGGAATCCCCTGCACTGTGTaGGTAATTAGATTACACAAT | + |
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Preference number: 2 (lower is better) Translates to: PCDPVSNLLLGMLRTEDGIPCTV*VIRLHN Trigger: ATTGTGTAATCTAATTACCCACACAGTGCAGGGGAT...TCCATCTTCTGTTCTTAACATTCCCAGTAATAAATTGCTTACTGGATCACAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475465.1 |
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| 3UTR CAA 72 bp | TTCCAGTTACTAGGGAGGCTGAGACAGGAGAATCACTaGAATCCGGGAGGCAAAGGTTGCAGTGTGTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: FQLLGRLRQENH*NPGGKGCSVSR Trigger: TCTTGACACACTGCAACCTTTGCCTCCCGGATTCAAGTGATTCTCCTGTCTCAGCCTCCCTAGTAACTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650309.2 |
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| CDS-3UTR CCA 90 bp | ATTACACAATCTCTCAAGTCCCTCCTAACTAGATATGTACACTACTATGTTAAGGTGGTCCCAGCTACTTaGGAGCCTGAGGCAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: ITQSLKSLLTRYVHYYVKVVPAT*EPEAEE Trigger: TTCTTCTGCCTCAGGCTCCCAAGTAGCTGGGACCAC...CTTAACATAGTAGTGTACATATCTAGTTAGGAGGGACTTGAGAGATTGTGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475465.1 |
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| CDS-3UTR GCA 90 bp | CCTTGTGATCCAGTAAGCAATTTATTACTGGGAATGTTAAGAACAGAAGATGGACGGCAATACAGCTGCTaGTTTGGTGCCAATTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PCDPVSNLLLGMLRTEDGRQYSC*FGANSL Trigger: AAGCGAATTGGCACCAAAGCAGCAGCTGTATTGCCG...TCCATCTTCTGTTCTTAACATTCCCAGTAATAAATTGCTTACTGGATCACAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475465.1 |
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| CDS-3UTR CCA 90 bp | ATTACACAATCTCTCAAGTCCCTCCTAACTAGATATGTACACTACTATGTTAAGATCCCCTGCACTGTGTaGGTAATTAGATTACACAAT | + |
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Preference number: 4 (lower is better) Translates to: ITQSLKSLLTRYVHYYVKIPCTV*VIRLHN Trigger: ATTGTGTAATCTAATTACCCACACAGTGCAGGGGAT...CTTAACATAGTAGTGTACATATCTAGTTAGGAGGGACTTGAGAGATTGTGTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475465.1 |
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