Pregenerated sensors for COX7A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000112695

Ensembl transcript IDs: ENST00000370081.6, ENST00000370089.6, ENST00000481061.2

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GAAAATGGCCACGCCGGAACCGGAACTACCTCCGAGTCTTGCGTATaGATTCACGAACTTAAATCTTTCCGGGCCGAAGAGAGGCTTGCG	+
Preference number: 5 (lower is better) Translates to: ENGHAGTGTTSESCV*IHELKSFRAEERLA Trigger: CGCAAGCCTCTCTTCGGCCCGGAAAGATTTAAGTTCGTGAATGCATACGCAAGACTCGGAGGTAGTTCCGGTTCCGGCGTGGCCATTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370081.6 ENST00000370089.6
CDS GCA 90 bp	ACCAACGAAAATGGCCACGCCGGAACCGGAACTACCTCCGAGTCTTaGGTATGCATTCACGAACTTAAATCTTTCCGGGCCGAAGAGAGG	+
Preference number: 5 (lower is better) Translates to: TNENGHAGTGTTSES*VCIHELKSFRAEER Trigger: CCTCTCTTCGGCCCGGAAAGATTTAAGTTCGTGAATGCATACGCAAGACTCGGAGGTAGTTCCGGTTCCGGCGTGGCCATTTTCGTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370081.6 ENST00000370089.6
CDS CCA 72 bp	CCAGCAACCGCCACAACTGAACACCACCAACGAAAATaGCCACGCCGGAACCGGAACTACCTCCGAGTCTTG	+
Preference number: 6 (lower is better) Translates to: PATATTEHHQRK*PRRNRNYLRVL Trigger: CAAGACTCGGAGGTAGTTCCGGTTCCGGCGTGGCCATTTTCGTTGGTGGTGTTCAGTTGTGGCGGTTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370081.6 ENST00000370089.6
CDS GCA 72 bp	CACGCCGGAACCGGAACTACCTCCGAGTCTTGCGTATaGATTCACGAACTTAAATCTTTCCGGGCCGAAGAG	+
Preference number: 6 (lower is better) Translates to: HAGTGTTSESCV*IHELKSFRAEE Trigger: CTCTTCGGCCCGGAAAGATTTAAGTTCGTGAATGCATACGCAAGACTCGGAGGTAGTTCCGGTTCCGGCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370081.6 ENST00000370089.6
CDS GCA 72 bp	AATGGCCACGCCGGAACCGGAACTACCTCCGAGTCTTaGGTATGCATTCACGAACTTAAATCTTTCCGGGCC	+
Preference number: 6 (lower is better) Translates to: NGHAGTGTTSES*VCIHELKSFRA Trigger: GGCCCGGAAAGATTTAAGTTCGTGAATGCATACGCAAGACTCGGAGGTAGTTCCGGTTCCGGCGTGGCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370081.6 ENST00000370089.6
CDS CCA 72 bp	TATTCCTGTTTTGACCTTATTAAACCCAGGCTTGTGTaGAATGATTGCTGCTTGGGCCTTACTAACTTAGGT	+
Preference number: 6 (lower is better) Translates to: YSCFDLIKPRLV*NDCCLGLTNLG Trigger: ACCTAAGTTAGTAAGGCCCAAGCAGCAATCATTCCACACAAGCCTGGGTTTAATAAGGTCAAAACAGGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370081.6
CDS CAA 72 bp	GAGATTATTCCTGTTTTGACCTTATTAAACCCAGGCTaGTGTGGAATGATTGCTGCTTGGGCCTTACTAACT	+
Preference number: 6 (lower is better) Translates to: EIIPVLTLLNPG*CGMIAAWALLT Trigger: AGTTAGTAAGGCCCAAGCAGCAATCATTCCACACAAGCCTGGGTTTAATAAGGTCAAAACAGGAATAATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370081.6
CDS GCA 72 bp	AAATCACTCATAATCAAACTACTTATAAAGGTAAATTaGTCTGCTCCACCAGGTCTTTCCCCAAGAGACAAC	+
Preference number: 6 (lower is better) Translates to: KSLIIKLLIKVN*SAPPGLSPRDN Trigger: GTTGTCTCTTGGGGAAAGACCTGGTGGAGCAGAGCAATTTACCTTTATAAGTAGTTTGATTATGAGTGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481061.2
CDS CAA 72 bp	AAAATCACTCATAATCAAACTACTTATAAAGGTAAATaGCTCTGCTCCACCAGGTCTTTCCCCAAGAGACAA	+
Preference number: 6 (lower is better) Translates to: KITHNQTTYKGK*LCSTRSFPKRQ Trigger: TTGTCTCTTGGGGAAAGACCTGGTGGAGCAGAGCAATTTACCTTTATAAGTAGTTTGATTATGAGTGATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481061.2