Pregenerated sensors for COX7A1 (Homo sapiens)
Ensembl gene IDs: ENSG00000161281Ensembl transcript IDs: ENST00000292907.8, ENST00000437291.6, ENST00000481297.1, ENST00000589154.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCAGCTGGGTTGGGAGGGGACTCGCCCTGGAGTCTGGCCTGGGGGTaGCCGGGCTGCCTAGAGGGTCCTGGAAGGGAGAGGACCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PAGLGGDSPWSLAWG*PGCLEGPGRERTQK Trigger: CTTCTGGGTCCTCTCCCTTCCAGGACCCTCTAGGCAGCCCGGTCACCCCCAGGCCAGACTCCAGGGCGAGTCCCCTCCCAACCCAGCTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000437291.6 |
||
| CDS TCA 90 bp | GTTTCTCGCGCACTCGGTTCTGAAAGCGGTTCCGGGCGGTGGAGCTaGAGGAGCGGATCAGCGCCTGGGACACCCGCGAACTGCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSRALGSESGSGRWS*RSGSAPGTPANCQL Trigger: CAGCTGGCAGTTCGCGGGTGTCCCAGGCGCTGATCCGCTCCTTCAGCTCCACCGCCCGGAACCGCTTTCAGAACCGAGTGCGCGAGAAAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437291.6 |
||
| CDS TCA 90 bp | GTTTCTCGCGCACTCGGTTCTGAAAGCGGTTCCGGGCGGTGGAGCTaGAGGAGCGGATCAGCGCCTGGGACACCCGAAGGGCCTGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VSRALGSESGSGRWS*RSGSAPGTPEGPAF Trigger: GAATGCAGGCCCTTCGGGTGTCCCAGGCGCTGATCCGCTCCTTCAGCTCCACCGCCCGGAACCGCTTTCAGAACCGAGTGCGCGAGAAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000292907.8 ENST00000481297.1 |
||
| CDS TCA 90 bp | TGTCATTGTCCTCTCGGTTCTGAAAGCGGTTCCGGGCGGTGGAGCTaGAGGAGCGGATCAGCGCCTGGGACACCCGAAGGGCCTGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: CHCPLGSESGSGRWS*RSGSAPGTPEGPAF Trigger: GAATGCAGGCCCTTCGGGTGTCCCAGGCGCTGATCCGCTCCTTCAGCTCCACCGCCCGGAACCGCTTTCAGAACCGAGAGGACAATGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589154.1 |
||
| CDS TCA 90 bp | TCATTGTCCTCCTGGAAGAGCTTCTGTTTCTCGCGCACTCGGTTCTaGAAGCGGTTCCGGGCGGTGGAGCTGAAGGAGCGGATCAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSSWKSFCFSRTRF*KRFRAVELKERISA Trigger: GGCGCTGATCCGCTCCTTCAGCTCCACCGCCCGGAACCGCTTTCAGAACCGAGTGCGCGAGAAACAGAAGCTCTTCCAGGAGGACAATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000292907.8 ENST00000437291.6 |
||
| CDS GCA 90 bp | CCAGACACAGCGTCATTGTCACTCGGTACAGGATGTTGTCAACGATaGCGCCCTTCAGGTACAACGGGATGTCATTGTCCTCCTGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PDTASLSLGTGCCQR*RPSGTTGCHCPPGR Trigger: TCTTCCAGGAGGACAATGACATCCCGTTGTACCTGAAGGGCGGCATCGTTGACAACATCCTGTACCGAGTGACAATGACGCTGTGTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000292907.8 ENST00000437291.6 |
||
| CDS GCA 90 bp | CCAGACACAGCGTCATTGTCACTCGGTACAGGATGTTGTCAACGATaGCGCCCTTCAGGTACAACGGGATGTCATTGTCCTCCTGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: PDTASLSLGTGCCQR*RPSGTTGCHCPPGC Trigger: ACATCCAGGAGGACAATGACATCCCGTTGTACCTGAAGGGCGGCATCGTTGACAACATCCTGTACCGAGTGACAATGACGCTGTGTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481297.1 |
||
| CDS GCA 90 bp | CCAGACACAGCGTCATTGTCACTCGGTACAGGATGTTGTCAACGATaGCGCCCTTCAGGTACAACGGGATGTCATTGTCCTCTCGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PDTASLSLGTGCCQR*RPSGTTGCHCPLGS Trigger: AGAACCGAGAGGACAATGACATCCCGTTGTACCTGAAGGGCGGCATCGTTGACAACATCCTGTACCGAGTGACAATGACGCTGTGTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589154.1 |
||
| CDS TCA 72 bp | TTGGGAGGGGACTCGCCCTGGAGTCTGGCCTGGGGGTaGCCGGGCTGCCTAGAGGGTCCTGGAAGGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGGDSPWSLAWG*PGCLEGPGRER Trigger: CCTCTCCCTTCCAGGACCCTCTAGGCAGCCCGGTCACCCCCAGGCCAGACTCCAGGGCGAGTCCCCTCCCAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000437291.6 |
||
| CDS GCA 72 bp | GGATCAGCGCCTGGGACACCCGAAGGGCCTGCATTCTaGCTTGTCCTCTTCCGCCGGAGTCACCTCCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSAPGTPEGPAF*LVLFRRSHLPS Trigger: AGAAGGGAGGTGACTCCGGCGGAAGAGGACAAGGCAGAATGCAGGCCCTTCGGGTGTCCCAGGCGCTGATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000292907.8 ENST00000481297.1 |
||
| CDS TCA 72 bp | TCCTGGAAGAGCTTCTGTTTCTCGCGCACTCGGTTCTaGAAGCGGTTCCGGGCGGTGGAGCTGAAGGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SWKSFCFSRTRF*KRFRAVELKER Trigger: CCGCTCCTTCAGCTCCACCGCCCGGAACCGCTTTCAGAACCGAGTGCGCGAGAAACAGAAGCTCTTCCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000292907.8 ENST00000437291.6 |
||
| CDS TCA 72 bp | ACCTGGAAGAGCTTCTGTTTCTCGCGCACTCGGTTCTaGAAGCGGTTCCGGGCGGTGGAGCTGAAGGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: TWKSFCFSRTRF*KRFRAVELKER Trigger: CCGCTCCTTCAGCTCCACCGCCCGGAACCGCTTTCAGAACCGAGTGCGCGAGAAACAGAAGCTCTTCCAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481297.1 |
||
| CDS CAA 72 bp | CCCAGACACAGCGTCATTGTCACTCGGTACAGGATGTaGTCAACGATGCCGCCCTTCAGGTACAACGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: PRHSVIVTRYRM*STMPPFRYNGM Trigger: CATCCCGTTGTACCTGAAGGGCGGCATCGTTGACAACATCCTGTACCGAGTGACAATGACGCTGTGTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000292907.8 ENST00000437291.6 ENST00000481297.1 ENST00000589154.1 |
||
| CDS CAA 72 bp | TCAACGATGCCGCCCTTCAGGTACAACGGGATGTCATaGTCCTCCTGGATGTGGGGGTGTCTGATGAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: STMPPFRYNGMS*SSWMWGCLMRK Trigger: CTTTCTCATCAGACACCCCCACATCCAGGAGGACAATGACATCCCGTTGTACCTGAAGGGCGGCATCGTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481297.1 |
||
| CDS GCA 72 bp | GCGTCATTGTCACTCGGTACAGGATGTTGTCAACGATaGCGCCCTTCAGGTACAACGGGATGTCATTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ASLSLGTGCCQR*RPSGTTGCHCP Trigger: AGGACAATGACATCCCGTTGTACCTGAAGGGCGGCATCGTTGACAACATCCTGTACCGAGTGACAATGACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000292907.8 ENST00000437291.6 ENST00000481297.1 ENST00000589154.1 |
||