Pregenerated sensors for COX6C (Homo sapiens)
Ensembl gene IDs: ENSG00000164919Ensembl transcript IDs: ENST00000518171.5, ENST00000520271.5, ENST00000520468.7, ENST00000522934.5, ENST00000522940.5, ENST00000523016.1, ENST00000606245.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAGGTGGACGGATCGCCTGAGCCCAGGAATTCAAGCACAGCCCAGGTAATATGGGGCAGGAAGATCCCTTaGGCCTGGGAGGTTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: KVDGSPEPRNSSTAQVIWGRKIP*AWEVEA Trigger: AGCCTCAACCTCCCAGGCTCAAGGGATCTTCCTGCC...CCATATTACCTGGGCTGTGCTTGAATTCCTGGGCTCAGGCGATCCGTCCACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518171.5 |
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| 3UTR-3UTR TCA 90 bp | AAGGTGGACGGATCGCCTGAGCCCAGGAATTCAAGCACAGCCCAGGTAATATGGGCACTACGGCCTGGGTaGCAGAGGGAGACCCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: KVDGSPEPRNSSTAQVIWALRPG*QRETLY Trigger: ATAAAGGGTCTCCCTCTGTCACCCAGGCCGTAGTGC...CCATATTACCTGGGCTGTGCTTGAATTCCTGGGCTCAGGCGATCCGTCCACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518171.5 |
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| 3UTR-3UTR TCA 90 bp | AAGGTGGACGGATCGCCTGAGCCCAGGAATTCAAGCACAGCCCAGGTAATATGGAGGTTGAGGCTGCAGTaGGCCATGATCGCACTACAG | + |
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Preference number: 2 (lower is better) Translates to: KVDGSPEPRNSSTAQVIWRLRLQ*AMIALQ Trigger: CTGTAGTGCGATCATGGCTCACTGCAGCCTCAACCT...CCATATTACCTGGGCTGTGCTTGAATTCCTGGGCTCAGGCGATCCGTCCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518171.5 |
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| 3UTR-3UTR GCA 90 bp | TTTATTAGGATTCTATCTCTTCTTAGAGCCCACAGTACAGTAGTCTTACAGGCTTCTTATGCTAGTAAGTaGCCTGCATTATCATTAAGA | + |
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Preference number: 2 (lower is better) Translates to: FIRILSLLRAHSTVVLQASYASK*PALSLR Trigger: TCTTAATGATAATGCAGGGCACTTACTAGCATAAGA...AGCCTGTAAGACTACTGTACTGTGGGCTCTAAGAAGAGATAGAATCCTAATAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520468.7 |
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| 3UTR CCA 72 bp | GCATCAGCTGTTTACCCTTGTGATTATGTTTCTGACTaGGGGATGTGGTCATTGGTGCTCCCCCACATCACA | + |
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Preference number: 3 (lower is better) Translates to: ASAVYPCDYVSD*GMWSLVLPHIT Trigger: TGTGATGTGGGGGAGCACCAATGACCACATCCCCCAGTCAGAAACATAATCACAAGGGTAAACAGCTGATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523016.1 |
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| 3UTR-3UTR CAA 90 bp | AGTACAGCATCAGCTGTTTACCCTTGTGATTATGTTTCTGACTGGGGGATGTGGCACATCACAAAAGTATaGTGCCACTTATTGCTCATG | + |
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Preference number: 3 (lower is better) Translates to: STASAVYPCDYVSDWGMWHITKV*CHLLLM Trigger: CATGAGCAATAAGTGGCACAATACTTTTGTGATGTG...CCACATCCCCCAGTCAGAAACATAATCACAAGGGTAAACAGCTGATGCTGTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523016.1 |
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| 3UTR-3UTR CAA 90 bp | CCCACATCACAAAAGTATTGTGCCACTTATTGCTCATGTGGACAAAGATCAAAAGACAGTCACCTGTATTaGCATTTTACCACAATTAGA | + |
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Preference number: 3 (lower is better) Translates to: PTSQKYCATYCSCGQRSKDSHLY*HFTTIR Trigger: TCTAATTGTGGTAAAATGCAAATACAGGTGACTGTC...TTTTGATCTTTGTCCACATGAGCAATAAGTGGCACAATACTTTTGTGATGTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000523016.1 |
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| 3UTR CCA 72 bp | ATCCTTCTCTTGTATTTTTGTTTGAGGCAGGTACTGTaGAGAATCATCATAGTGTCCAAAGTATTTGTTAAT | + |
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Preference number: 3 (lower is better) Translates to: ILLLYFCLRQVL*RIIIVSKVFVN Trigger: ATTAACAAATACTTTGGACACTATGATGATTCTCCACAGTACCTGCCTCAAACAAAAATACAAGAGAAGGAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522934.5 |
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| CDS-3UTR TCA 90 bp | GCCAAGGTGGACGGATCGCCTGAGCCCAGGAATTCAAGCACAGCCCAGGTAATAGGCAGGAAGATCCCTTaGGCCTGGGAGGTTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: AKVDGSPEPRNSSTAQVIGRKIP*AWEVEA Trigger: AGCCTCAACCTCCCAGGCTCAAGGGATCTTCCTGCC...TATTACCTGGGCTGTGCTTGAATTCCTGGGCTCAGGCGATCCGTCCACCTTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518171.5 |
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| CDS-3UTR TCA 90 bp | GCCAAGGTGGACGGATCGCCTGAGCCCAGGAATTCAAGCACAGCCCAGGTAATAGGTGGACGGATCGCCTaGGCCCAGGAATTCAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: AKVDGSPEPRNSSTAQVIGGRIA*AQEFKH Trigger: GTGCTTGAATTCCTGGGCTCAGGCGATCCGTCCACC...TATTACCTGGGCTGTGCTTGAATTCCTGGGCTCAGGCGATCCGTCCACCTTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518171.5 |
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| CDS-3UTR TCA 90 bp | GCCAAGGTGGACGGATCGCCTGAGCCCAGGAATTCAAGCACAGCCCAGGTAATAAATGCTACAGCCATATaGTTTCGCAGACGCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: AKVDGSPEPRNSSTAQVINATAI*FRRRLA Trigger: GGCCAGGCGTCTGCGAAATCATATGGCTGTAGCATT...TATTACCTGGGCTGTGCTTGAATTCCTGGGCTCAGGCGATCCGTCCACCTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518171.5 |
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| CDS-3UTR CCA 90 bp | CTTGTGATTATGTTTCTGACTGGGGGATGTGGTCATTGGTGCTCCCCCACATCATCTGACTGGGGGATGTaGTCATTGGTGCTCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LVIMFLTGGCGHWCSPTSSDWGM*SLVLPH Trigger: GTGGGGGAGCACCAATGACCACATCCCCCAGTCAGA...TGATGTGGGGGAGCACCAATGACCACATCCCCCAGTCAGAAACATAATCACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000523016.1 |
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| CDS-3UTR TCA 90 bp | AAGGTGGACGGATCGCCTGAGCCCAGGAATTCAAGCACAGCCCAGGTAATATGGGCCCAGGTAATATGGTaGAACCCTGTCTCTACTAAA | + |
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Preference number: 4 (lower is better) Translates to: KVDGSPEPRNSSTAQVIWAQVIW*NPVSTK Trigger: TTTAGTAGAGACAGGGTTTCACCATATTACCTGGGC...CCATATTACCTGGGCTGTGCTTGAATTCCTGGGCTCAGGCGATCCGTCCACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518171.5 |
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| CDS-3UTR GCA 90 bp | GCCAAGGTGGACGGATCGCCTGAGCCCAGGAATTCAAGCACAGCCCAGGTAATAAAAATACCAAAATTATaGCAGGCACAGTGGCTCACG | + |
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Preference number: 4 (lower is better) Translates to: AKVDGSPEPRNSSTAQVIKIPKL*QAQWLT Trigger: CGTGAGCCACTGTGCCTGGCATAATTTTGGTATTTT...TATTACCTGGGCTGTGCTTGAATTCCTGGGCTCAGGCGATCCGTCCACCTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518171.5 |
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| CDS-3UTR TCA 90 bp | GGATGTGGTCATTGGTGCTCCCCCACATCACAAAAGTATTGTGCCACTTATTGCAATGCTACAGCCATATaGTTTCGCAGACGCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GCGHWCSPTSQKYCATYCNATAI*FRRRLA Trigger: GGCCAGGCGTCTGCGAAATCATATGGCTGTAGCATT...GCAATAAGTGGCACAATACTTTTGTGATGTGGGGGAGCACCAATGACCACATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523016.1 |
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| CDS-3UTR CCA 90 bp | AGTACAGCATCAGCTGTTTACCCTTGTGATTATGTTTCTGACTGGGGGATGTGGGGGGGATGTGGTCATTaGTGCTCCCCCACATCACAA | + |
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Preference number: 4 (lower is better) Translates to: STASAVYPCDYVSDWGMWGGCGH*CSPTSQ Trigger: TTGTGATGTGGGGGAGCACCAATGACCACATCCCCC...CCACATCCCCCAGTCAGAAACATAATCACAAGGGTAAACAGCTGATGCTGTACT 50% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000523016.1 |
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| CDS-3UTR GCA 90 bp | TTTATTAGGATTCTATCTCTTCTTAGAGCCCACAGTACAGTAGTCTTACAGGCTAGGAAAAACGAACCGTaGTGTAGCCGCGCGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: FIRILSLLRAHSTVVLQARKNEP*CSRAQA Trigger: CGCCTGCGCGCGGCTACAGCACGGTTCGTTTTTCCT...AGCCTGTAAGACTACTGTACTGTGGGCTCTAAGAAGAGATAGAATCCTAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520468.7 |
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| CDS-3UTR GCA 90 bp | TTGTATTTTTGTTTGAGGCAGGTACTGTGGAGAATCATCATAGTGTCCAAAGTAAGGAAAAACGAACCGTaGTGTAGCCGCGCGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: LYFCLRQVLWRIIIVSKVRKNEP*CSRAQA Trigger: CGCCTGCGCGCGGCTACAGCACGGTTCGTTTTTCCT...TACTTTGGACACTATGATGATTCTCCACAGTACCTGCCTCAAACAAAAATACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000522934.5 |
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| CDS-3UTR CCA 90 bp | GTACAGCATCAGCTGTTTACCCTTGTGATTATGTTTCTGACTGGGGGATGTGGTGATTATGTTTCTGACTaGGGGATGTGGTCATTGGTG | + |
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Preference number: 4 (lower is better) Translates to: VQHQLFTLVIMFLTGGCGDYVSD*GMWSLV Trigger: CACCAATGACCACATCCCCCAGTCAGAAACATAATC...ACCACATCCCCCAGTCAGAAACATAATCACAAGGGTAAACAGCTGATGCTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523016.1 |
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| CDS-3UTR TCA 90 bp | AGGCCAAGGATAGATTTTATTAGGATTCTATCTCTTCTTAGAGCCCACAGTACAAATGCTACAGCCATATaGTTTCGCAGACGCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RPRIDFIRILSLLRAHSTNATAI*FRRRLA Trigger: GGCCAGGCGTCTGCGAAATCATATGGCTGTAGCATT...TGTACTGTGGGCTCTAAGAAGAGATAGAATCCTAATAAAATCTATCCTTGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520468.7 |
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| CDS-3UTR TCA 90 bp | TTGTATTTTTGTTTGAGGCAGGTACTGTGGAGAATCATCATAGTGTCCAAAGTAAATGCTACAGCCATATaGTTTCGCAGACGCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LYFCLRQVLWRIIIVSKVNATAI*FRRRLA Trigger: GGCCAGGCGTCTGCGAAATCATATGGCTGTAGCATT...TACTTTGGACACTATGATGATTCTCCACAGTACCTGCCTCAAACAAAAATACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522934.5 |
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| 3UTR CAA 72 bp | ATGTGGTCATTGGTGCTCCCCCACATCACAAAAGTATaGTGCCACTTATTGCTCATGTGGACAAAGATCAAA | + |
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Preference number: 4 (lower is better) Translates to: MWSLVLPHITKV*CHLLLMWTKIK Trigger: TTTGATCTTTGTCCACATGAGCAATAAGTGGCACAATACTTTTGTGATGTGGGGGAGCACCAATGACCACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523016.1 |
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| CDS-3UTR CCA 90 bp | TGTTTGAGGCAGGTACTGTGGAGAATCATCATAGTGTCCAAAGTATTTGTTAATTTGAGGCAGGTACTGTaGAGAATCATCATAGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: CLRQVLWRIIIVSKVFVNLRQVL*RIIIVS Trigger: GGACACTATGATGATTCTCCACAGTACCTGCCTCAA...ATTAACAAATACTTTGGACACTATGATGATTCTCCACAGTACCTGCCTCAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522934.5 |
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| CDS-3UTR TCA 90 bp | CTTGTATTTTTGTTTGAGGCAGGTACTGTGGAGAATCATCATAGTGTCCAAAGTTCTTGTATTTTTGTTTaGGGCAGGTACTGTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LVFLFEAGTVENHHSVQSSCIFV*GRYCGE Trigger: TTCTCCACAGTACCTGCCTCAAACAAAAATACAAGA...ACTTTGGACACTATGATGATTCTCCACAGTACCTGCCTCAAACAAAAATACAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000522934.5 |
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| CDS-3UTR TCA 90 bp | AGGCCAAGGATAGATTTTATTAGGATTCTATCTCTTCTTAGAGCCCACAGTACAAGTCTTACAGGCTCATaGAGAACACTTTTTAATCCA | + |
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Preference number: 4 (lower is better) Translates to: RPRIDFIRILSLLRAHSTSLTGS*RTLFNP Trigger: TGGATTAAAAAGTGTTCTTCATGAGCCTGTAAGACT...TGTACTGTGGGCTCTAAGAAGAGATAGAATCCTAATAAAATCTATCCTTGGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520468.7 |
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| CDS-3UTR GCA 90 bp | TATAATAAAACACTGAGTATCTCACACAACACTACAGAGTACAGCATCAGCTGTATCACAAAAGTATTGTaGCACTTATTGCTCATGTGG | + |
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Preference number: 4 (lower is better) Translates to: YNKTLSISHNTTEYSISCITKVL*HLLLMW Trigger: CCACATGAGCAATAAGTGGCACAATACTTTTGTGAT...ACAGCTGATGCTGTACTCTGTAGTGTTGTGTGAGATACTCAGTGTTTTATTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523016.1 |
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| CDS-3UTR GCA 90 bp | AGGCCAAGGATAGATTTTATTAGGATTCTATCTCTTCTTAGAGCCCACAGTACATCTTATGCTAGTAAGTaGCCTGCATTATCATTAAGA | + |
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Preference number: 4 (lower is better) Translates to: RPRIDFIRILSLLRAHSTSYASK*PALSLR Trigger: TCTTAATGATAATGCAGGGCACTTACTAGCATAAGA...TGTACTGTGGGCTCTAAGAAGAGATAGAATCCTAATAAAATCTATCCTTGGCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520468.7 |
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| CDS-3UTR TCA 90 bp | TTAAGTCTAAACATTGTGAGGGACAGTCACCTGTATTTGCATTTTACCACAATTATGTTAGCCTACAGCTaGAGAAAATCATCTAACACA | + |
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Preference number: 4 (lower is better) Translates to: LSLNIVRDSHLYLHFTTIMLAYS*RKSSNT Trigger: TGTGTTAGATGATTTTCTTCAGCTGTAGGCTAACAT...AATTGTGGTAAAATGCAAATACAGGTGACTGTCCCTCACAATGTTTAGACTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523016.1 |
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| CDS-3UTR GCA 90 bp | TTAAGTCTAAACATTGTGAGGGACAGTCACCTGTATTTGCATTTTACCACAATTTATTGTGCCACTTATTaGTCATGTGGACAAAGATCA | + |
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Preference number: 4 (lower is better) Translates to: LSLNIVRDSHLYLHFTTIYCATY*SCGQRS Trigger: TGATCTTTGTCCACATGAGCAATAAGTGGCACAATA...AATTGTGGTAAAATGCAAATACAGGTGACTGTCCCTCACAATGTTTAGACTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523016.1 |
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| CDS CCA 90 bp | AAGCCAGCTGGGTTCTCGAGGGTCCCGCAGCCCACCCGGCTTCGGTaGGGCCGTCGCAACCCACCCCGGTCCGTGGTCCGCCCGCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: KPAGFSRVPQPTRLR*GRRNPPRSVVRPPP Trigger: GGGCGGCGGGCGGACCACGGACCGGGGTGGGTTGCGACGGCCCCACCGAAGCCGGGTGGGCTGCGGGACCCTCGAGAACCCAGCTGGCTT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522940.5 |
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| CDS-3UTR CAA 90 bp | GTACAGCATCAGCTGTTTACCCTTGTGATTATGTTTCTGACTGGGGGATGTGGTGACAGTCACCTGTATTaGCATTTTACCACAATTAGA | + |
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Preference number: 5 (lower is better) Translates to: VQHQLFTLVIMFLTGGCGDSHLY*HFTTIR Trigger: TCTAATTGTGGTAAAATGCAAATACAGGTGACTGTC...ACCACATCCCCCAGTCAGAAACATAATCACAAGGGTAAACAGCTGATGCTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523016.1 |
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| CDS-3UTR CAA 90 bp | CTTGTATTTTTGTTTGAGGCAGGTACTGTGGAGAATCATCATAGTGTCCAAAGTCCTTCTCTTGTATTTTaGTTTGAGGCAGGTACTGTG | + |
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Preference number: 5 (lower is better) Translates to: LVFLFEAGTVENHHSVQSPSLVF*FEAGTV Trigger: CACAGTACCTGCCTCAAACAAAAATACAAGAGAAGG...ACTTTGGACACTATGATGATTCTCCACAGTACCTGCCTCAAACAAAAATACAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522934.5 |
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| CDS-3UTR CAA 90 bp | TTCAACTGTGATCCTTCTCTTGTATTTTTGTTTGAGGCAGGTACTGTGGAGAATACTGTGATCCTTCTCTaGTATTTTTGTTTGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: FNCDPSLVFLFEAGTVENTVILL*YFCLRQ Trigger: CTGCCTCAAACAAAAATACAAGAGAAGGATCACAGT...ATTCTCCACAGTACCTGCCTCAAACAAAAATACAAGAGAAGGATCACAGTTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000522934.5 |
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| CDS-3UTR CAA 90 bp | TGTTTGAGGCAGGTACTGTGGAGAATCATCATAGTGTCCAAAGTATTTGTTAATGACTGCAGATTTCTTTaGCTGTTGAACTGTCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: CLRQVLWRIIIVSKVFVNDCRFL*LLNCLQ Trigger: TTGAAGACAGTTCAACAGCAAAAGAAATCTGCAGTC...ATTAACAAATACTTTGGACACTATGATGATTCTCCACAGTACCTGCCTCAAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522934.5 |
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| CDS-3UTR CAA 90 bp | CTAAACATTGTGAGGGACAGTCACCTGTATTTGCATTTTACCACAATTAGAAATCACATCACAAAAGTATaGTGCCACTTATTGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: LNIVRDSHLYLHFTTIRNHITKV*CHLLLM Trigger: CATGAGCAATAAGTGGCACAATACTTTTGTGATGTG...ATTTCTAATTGTGGTAAAATGCAAATACAGGTGACTGTCCCTCACAATGTTTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523016.1 |
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| CDS CCA 72 bp | GGGTTCTCGAGGGTCCCGCAGCCCACCCGGCTTCGGTaGGGCCGTCGCAACCCACCCCGGTCCGTGGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: GFSRVPQPTRLR*GRRNPPRSVVR Trigger: GCGGACCACGGACCGGGGTGGGTTGCGACGGCCCCACCGAAGCCGGGTGGGCTGCGGGACCCTCGAGAACCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522940.5 |
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| CDS TCA 72 bp | CAGCGGAAGCGTGAGAGAGTAGATGCGGGAGAGGCCTaGAGCTGCACCACGGCGGAGACACACAGTCACGAC | + |
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Preference number: 6 (lower is better) Translates to: QRKRERVDAGEA*SCTTAETHSHD Trigger: GTCGTGACTGTGTGTCTCCGCCGTGGTGCAGCTTCAGGCCTCTCCCGCATCTACTCTCTCACGCTTCCGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520271.5 ENST00000522940.5 |
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| CDS TCA 72 bp | GTGAGCCATGATCGCACTACAGCACTACGGCCTGGGTaGCAGAGGGAGACCCTTTATATTCCAAGATTACTT | + |
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Preference number: 6 (lower is better) Translates to: VSHDRTTALRPG*QRETLYIPRLL Trigger: AAGTAATCTTGGAATATAAAGGGTCTCCCTCTGTCACCCAGGCCGTAGTGCTGTAGTGCGATCATGGCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518171.5 |
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| CDS CAA 72 bp | AGCTCCCTGACCACTCTGAATAGCCTCTTTTCCATTTaGGGCATACCACACCTTACTCTCATTGCTTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSLTTLNSLFSI*GIPHLTLIACV Trigger: CACACAAGCAATGAGAGTAAGGTGTGGTATGCCCAAAATGGAAAAGAGGCTATTCAGAGTGGTCAGGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606245.1 |
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| CDS CAA 90 bp | TTTGAGGATCAACTGAGGTCTATTCCTACTAGTAGACTTCACACCTaGATCACTCACCCTCAGCCACAGAAAAAGCACAGTTCAGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: FEDQLRSIPTSRLHT*ITHPQPQKKHSSGY Trigger: GTAGCCTGAACTGTGCTTTTTCTGTGGCTGAGGGTGAGTGATCAAGGTGTGAAGTCTACTAGTAGGAATAGACCTCAGTTGATCCTCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606245.1 |
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| CDS CAA 72 bp | CAACTGAGGTCTATTCCTACTAGTAGACTTCACACCTaGATCACTCACCCTCAGCCACAGAAAAAGCACAGT | + |
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Preference number: 6 (lower is better) Translates to: QLRSIPTSRLHT*ITHPQPQKKHS Trigger: ACTGTGCTTTTTCTGTGGCTGAGGGTGAGTGATCAAGGTGTGAAGTCTACTAGTAGGAATAGACCTCAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606245.1 |
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