RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COX6B2 (Homo sapiens)

Ensembl gene IDs: ENSG00000160471

Ensembl transcript IDs: ENST00000326529.9, ENST00000586191.1, ENST00000587357.1, ENST00000587854.1, ENST00000588572.6, ENST00000589467.1, ENST00000589879.1, ENST00000590900.5, ENST00000593184.5

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACAGGTGATGGTCCACCAGGCTGGAGGCCAGGCCGGGCAGGTCTaGCCCTGCCCCTGGCTCAGGCATCAGTGGGGCAGTGGCGGCTGG +
Preference number: 1 (lower is better)
Translates to: AQVMVHQAGGQAGQV*PCPWLRHQWGSGGW
Trigger: CCAGCCGCCACTGCCCCACTGATGCCTGAGCCAGGGGCAGGGGCAGACCTGCCCGGCCTGGCCTCCAGCCTGGTGGACCATCACCTGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR CCA 90 bp CTGGAGGAGGTGTTCGGAGTTTGCACAGGTGATGGTCCACCAGGCTaGAGGCCAGGCCGGGCAGGTCTGCCCCTGCCCCTGGCTCAGGCA +
Preference number: 1 (lower is better)
Translates to: LEEVFGVCTGDGPPG*RPGRAGLPLPLAQA
Trigger: TGCCTGAGCCAGGGGCAGGGGCAGACCTGCCCGGCCTGGCCTCCAGCCTGGTGGACCATCACCTGTGCAAACTCCGAACACCTCCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR GCA 90 bp GAGCTGGCTGGGGAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTaGAGGGGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTGG +
Preference number: 1 (lower is better)
Translates to: ELAGEGRCVCLASLS*RGPWLPRSWRRSCW
Trigger: CCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCCAGCCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR GCA 90 bp CTCAGCTGCAGGGGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATaGTGGCACTTCCCAGCTGGCAGGACCTGGGGGACATCCTGGTGG +
Preference number: 1 (lower is better)
Translates to: LSCRGPWLPRSWRRS*WHFPAGRTWGTSWW
Trigger: CCACCAGGATGTCCCCCAGGTCCTGCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCCCCTGCAGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR GCA 90 bp ACCAGGGAAAGCCAGCCAGAGCACCTGGAGGAGGTGTTCGGAGTTTaGACAGGTGATGGTCCACCAGGCTGGAGGCCAGGCCGGGCAGGT +
Preference number: 1 (lower is better)
Translates to: TRESQPEHLEEVFGV*TGDGPPGWRPGRAG
Trigger: ACCTGCCCGGCCTGGCCTCCAGCCTGGTGGACCATCACCTGTGCAAACTCCGAACACCTCCTCCAGGTGCTCTGGCTGGCTTTCCCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR CCA 90 bp AGCTGCAGGGGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTaGCACTTCCCAGCTGGCAGGACCTGGGGGACATCCTGGTGGAGC +
Preference number: 1 (lower is better)
Translates to: SCRGPWLPRSWRRSC*HFPAGRTWGTSWWS
Trigger: GCTCCACCAGGATGTCCCCCAGGTCCTGCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCCCCTGCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR CCA 90 bp AGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTaGCTGGGGAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCA +
Preference number: 1 (lower is better)
Translates to: RDVGALSHLAHTDRS*LGRAGVSAWRPSAA
Trigger: TGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR TCA 90 bp CAAGCGGCACTCCTTGGCCTTGGAGCCATCTGGGTGGGACAGTGTTaGGAACTGGGGACCCTGGGCTGGCTCGTAGCTGTCAACGCGAGG +
Preference number: 1 (lower is better)
Translates to: QAALLGLGAIWVGQC*ELGTLGWLVAVNAR
Trigger: CCTCGCGTTGACAGCTACGAGCCAGCCCAGGGTCCCCAGTTCTCAACACTGTCCCACCCAGATGGCTCCAAGGCCAAGGAGTGCCGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593184.5
3UTR CCA 90 bp GAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTaGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCACTTCCCAGCT +
Preference number: 1 (lower is better)
Translates to: EGRCVCLASLSCRGP*LPRSWRRSCWHFPA
Trigger: AGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR CCA 90 bp CCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTaGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGG +
Preference number: 1 (lower is better)
Translates to: PVLVAAWRVRTALGT*ALSVISPIQTGAGW
Trigger: CCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR TCA 90 bp AGCTTGTCTAGGGTCACCCTTGGAGCCATCTGGGTGGGACAGTGTTaGGAACTGGGGACCCTGGGCTGGCTCGTAGCTGTCAACGCGAGG +
Preference number: 1 (lower is better)
Translates to: SLSRVTLGAIWVGQC*ELGTLGWLVAVNAR
Trigger: CCTCGCGTTGACAGCTACGAGCCAGCCCAGGGTCCCCAGTTCTCAACACTGTCCCACCCAGATGGCTCCAAGGGTGACCCTAGACAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR CCA 90 bp CACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATaGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATC +
Preference number: 1 (lower is better)
Translates to: HQAHSDRPFPVLVAA*RVRTALGTWALSVI
Trigger: GATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR CCA 90 bp TCAGGAGGCGGCTACTGGACACCAGGGAAAGCCAGCCAGAGCACCTaGAGGAGGTGTTCGGAGTTTGCACAGGTGATGGTCCACCAGGCT +
Preference number: 1 (lower is better)
Translates to: SGGGYWTPGKASQST*RRCSEFAQVMVHQA
Trigger: AGCCTGGTGGACCATCACCTGTGCAAACTCCGAACACCTCCTCCAGGTGCTCTGGCTGGCTTTCCCTGGTGTCCAGTAGCCGCCTCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR TCA 90 bp GAAACTGGCGATCAGGGTTTCCTGGCCTCCGCACTGCTGCCATGCTaGGCTGGTGTTTCTAGGCAGGGCCTGTCCCATGCATTGCAGGAT +
Preference number: 1 (lower is better)
Translates to: ETGDQGFLASALLPC*AGVSRQGLSHALQD
Trigger: ATCCTGCAATGCATGGGACAGGCCCTGCCTAGAAACACCAGCTCAGCATGGCAGCAGTGCGGAGGCCAGGAAACCCTGATCGCCAGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR CCA 90 bp GGGTCCTCTGGTCGAAGCCTGGGCCTGAGAACCCCATCATACACGTaGAGACCAGAGCAAGGGAAACAAGGAACTCGAAGGCTGGTGGCA +
Preference number: 1 (lower is better)
Translates to: GSSGRSLGLRTPSYT*RPEQGKQGTRRLVA
Trigger: TGCCACCAGCCTTCGAGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGACCAGAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326529.9
3UTR CCA 90 bp GGGTCCTCTGGTCGAAGCCTGGGCCTGAGAACCCCATCATACACGTaGAGACCAGAGCAAGGGAAACAAGGAACTCGAAGGCTGGTGGCT +
Preference number: 1 (lower is better)
Translates to: GSSGRSLGLRTPSYT*RPEQGKQGTRRLVA
Trigger: AGCCACCAGCCTTCGAGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGACCAGAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR CCA 90 bp AAGGAACTCGAAGGCTGGTGGCTGCATTATTCGTGGCTTAGACACTaGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCGAGACA +
Preference number: 1 (lower is better)
Translates to: KELEGWWLHYSWLRH*EVGVDNRDPGLRET
Trigger: TGTCTCGCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATGCAGCCACCAGCCTTCGAGTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588572.6
3UTR TCA 90 bp GAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAAGCCTGGGCCTaGGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAG +
Preference number: 1 (lower is better)
Translates to: EETVVAEGPLVEAWA*EPHHTRGDQSKGNK
Trigger: CTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR TCA 90 bp TCAAGGCTCTGGGGACGTTGCATGAACAGGAAGCCCTCCTGTAGTTaGGTCCACACCCTGTGCCCTCACCCCATTCTTGGGTTGTGGTCA +
Preference number: 1 (lower is better)
Translates to: SRLWGRCMNRKPSCS*VHTLCPHPILGLWS
Trigger: TGACCACAACCCAAGAATGGGGTGAGGGCACAGGGTGTGGACTCAACTACAGGAGGGCTTCCTGTTCATGCAACGTCCCCAGAGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR CCA 90 bp GTGTCCTCCTCTGATAATGGGGCCCTGAGCCATCTTGGTTTGCCTTaGGGAACCTCGGGCTCACACAGGTCAAGAAGCTTGTCTAGGGTC +
Preference number: 1 (lower is better)
Translates to: VSSSDNGALSHLGLP*GTSGSHRSRSLSRV
Trigger: GACCCTAGACAAGCTTCTTGACCTGTGTGAGCCCGAGGTTCCCCAAGGCAAACCAAGATGGCTCAGGGCCCCATTATCAGAGGAGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR TCA 90 bp CCACAGCTCTTAGACAAAGAGGGCAGCGGAGCAGGGAGTCTCAGCTaGGGACTCATGGGTGGACATTGGAATTTCCAGGAACCTTCTGAA +
Preference number: 1 (lower is better)
Translates to: PQLLDKEGSGAGSLS*GLMGGHWNFQEPSE
Trigger: TTCAGAAGGTTCCTGGAAATTCCAATGTCCACCCATGAGTCCTCAGCTGAGACTCCCTGCTCCGCTGCCCTCTTTGTCTAAGAGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588572.6
3UTR-3UTR CCA 90 bp GCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGAAGGCAGCACCGGGTGGTaGGGGAGGGGAGACACCAGG +
Preference number: 2 (lower is better)
Translates to: AGVSAWRPSAAGDPGFHEGSTGW*GRGDTR
Trigger: CCTGGTGTCTCCCCTCCCCCACCACCCGGTGCTGCC...TTCGTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CCA 90 bp GACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAAGCCTGGGCCTGAGCTGGGCAGCACCGGGTaGTGGGGGAGGGGAGACACC +
Preference number: 2 (lower is better)
Translates to: DRKKRWWQRVLWSKPGPELGSTG*WGRGDT
Trigger: GGTGTCTCCCCTCCCCCACCACCCGGTGCTGCCCAG...CTCAGGCCCAGGCTTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CCA 90 bp CGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGAGGGCCTGGGGACCCTGGGCTaGCTCGTAGCTGTCAACGCG +
Preference number: 2 (lower is better)
Translates to: RGRSQSSRPYRQELAGEGLGTLG*LVAVNA
Trigger: CGCGTTGACAGCTACGAGCCAGCCCAGGGTCCCCAG...GCCCTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR CAA 90 bp CGCCCATACAGACAGGAGCTGGCTGGGGAGGGCAGGTGTGTCTGCTaGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGAAGTTGG +
Preference number: 2 (lower is better)
Translates to: RPYRQELAGEGRCVC*ASLSCRGPWLPRSW
Trigger: CCAACTTCGTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCCAGCCAGCTCCTGTCTGTATGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp CCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTGCATCAGTGGGGCAGTaGCGGCTGGGTGACCTCACC +
Preference number: 2 (lower is better)
Translates to: PCRSMEGQDSLRDVGALSASVGQ*RLGDLT
Trigger: GGTGAGGTCACCCAGCCGCCACTGCCCCACTGATGC...ACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR CAA 90 bp GGTCTCACGGCTCCCTCAGCAGGACCAGGCTGGAACCCTAGGGCTTaGTCAAGCGGCACTCCTTGGCCTTGGAGCCATCTGGGTGGGACA +
Preference number: 2 (lower is better)
Translates to: GLTAPSAGPGWNPRA*SSGTPWPWSHLGGT
Trigger: TGTCCCACCCAGATGGCTCCAAGGCCAAGGAGTGCCGCTTGACAAAGCCCTAGGGTTCCAGCCTGGTCCTGCTGAGGGAGCCGTGAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593184.5
3UTR-3UTR TCA 90 bp CGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGAGGGCGTCGAAGCCTGGGCCTaGGAACCCCATCATACACGT +
Preference number: 2 (lower is better)
Translates to: RGRSQSSRPYRQELAGEGVEAWA*EPHHTR
Trigger: ACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGAC...GCCCTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR GCA 90 bp CATTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTCTGTGAGGGCAGGTGTGTCTaGTTGGCGTCCCTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: HSVTQRGVLPPWFCQRLCEGRCV*LASLSC
Trigger: GCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTC...ACAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp GACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAAGCCTGGGCCTGAGTGGCAGAGGGTCCTCTaGTCGAAGCCTGGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: DRKKRWWQRVLWSKPGPEWQRVL*SKPGPE
Trigger: CTCAGGCCCAGGCTTCGACCAGAGGACCCTCTGCCA...CTCAGGCCCAGGCTTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp GCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGAAGGTGGAGCAGGGGCCTaGGGTCATGAGTTCACCAAG +
Preference number: 2 (lower is better)
Translates to: AGVSAWRPSAAGDPGFHEGGAGA*GHEFTK
Trigger: CTTGGTGAACTCATGACCCCAGGCCCCTGCTCCACC...TTCGTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp GCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGAAAGCTGCAGGGGACCCTaGCTTCCACGAAGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: AGVSAWRPSAAGDPGFHESCRGP*LPRSWR
Trigger: CCTCCAACTTCGTGGAAGCCAGGGTCCCCTGCAGCT...TTCGTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp CCATTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTCTGCATACAGACAGGAGCTaGCTGGGGAGGGCAGGTGTG +
Preference number: 2 (lower is better)
Translates to: PFCDSERGPAPVVLPAPLHTDRS*LGRAGV
Trigger: CACACCTGCCCTCCCCAGCCAGCTCCTGTCTGTATG...CAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp AATGGTGAGGGCGTTAGAAACTGGCGATCAGGGTTTCCTGGCCTCCGCACTGCTCTGGGCAGCACCGGGTaGTGGGGGAGGGGAGACACC +
Preference number: 2 (lower is better)
Translates to: NGEGVRNWRSGFPGLRTALGSTG*WGRGDT
Trigger: GGTGTCTCCCCTCCCCCACCACCCGGTGCTGCCCAG...AGCAGTGCGGAGGCCAGGAAACCCTGATCGCCAGTTTCTAACGCCCTCACCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CCA 90 bp AGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGCTGGGGACCCTGGGCTaGCTCGTAGCTGTCAACGCG +
Preference number: 2 (lower is better)
Translates to: RVRTALGTWALSVISPIQLGTLG*LVAVNA
Trigger: CGCGTTGACAGCTACGAGCCAGCCCAGGGTCCCCAG...CTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR CAA 90 bp TCAAGCGGCACTCCTTGGCCTTGGAGCCATCTGGGTGGGACAGTGTaGAGAACTGGGGACCCTGGGCTGGCTCGTAGCTGTCAACGCGAG +
Preference number: 2 (lower is better)
Translates to: SSGTPWPWSHLGGTV*RTGDPGLARSCQRE
Trigger: CTCGCGTTGACAGCTACGAGCCAGCCCAGGGTCCCCAGTTCTCAACACTGTCCCACCCAGATGGCTCCAAGGCCAAGGAGTGCCGCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593184.5
3UTR-3UTR TCA 90 bp CCATTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTCTGAAGCCCTCCTGTAGTTaGGTCCACACCCTGTGCCCT +
Preference number: 2 (lower is better)
Translates to: PFCDSERGPAPVVLPAPLKPSCS*VHTLCP
Trigger: AGGGCACAGGGTGTGGACTCAACTACAGGAGGGCTT...CAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR TCA 90 bp GCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGAAAAGCCCTCCTGTAGTTaGGTCCACACCCTGTGCCCT +
Preference number: 2 (lower is better)
Translates to: AGVSAWRPSAAGDPGFHEKPSCS*VHTLCP
Trigger: AGGGCACAGGGTGTGGACTCAACTACAGGAGGGCTT...TTCGTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR GCA 90 bp AGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGTTGGCGTCCCTCAGCTaGAGGGGACCCTGGCTTCCA +
Preference number: 2 (lower is better)
Translates to: RVRTALGTWALSVISPIQLASLS*RGPWLP
Trigger: TGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAA...CTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp GCTCCATTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTAGGAAGAAACGGTGGTaGCAGAGGGTCCTCTGGTCG +
Preference number: 2 (lower is better)
Translates to: APFCDSERGPAPVVLPAPRKKRW*QRVLWS
Trigger: CGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCT...AGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAATGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp TGGGGGAGGGGAGACACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGGGTGGAGCAGGGGCCTaGGGTCATGAGTTCACCAAG +
Preference number: 2 (lower is better)
Translates to: WGRGDTRPIVTDHSLSLSGGAGA*GHEFTK
Trigger: CTTGGTGAACTCATGACCCCAGGCCCCTGCTCCACC...CGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGTGTCTCCCCTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CCA 90 bp AGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGCTGGCACTTCCCAGCTaGCAGGACCTGGGGGACATC +
Preference number: 2 (lower is better)
Translates to: RVRTALGTWALSVISPIQLALPS*QDLGDI
Trigger: GATGTCCCCCAGGTCCTGCCAGCTGGGAAGTGCCAG...CTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp GACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAAGCCTGGGCCTGAGTGGAGGCGTTCATGCTaGCACTTCCCAGCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: DRKKRWWQRVLWSKPGPEWRRSC*HFPAGR
Trigger: CCTGCCAGCTGGGAAGTGCCAGCATGAACGCCTCCA...CTCAGGCCCAGGCTTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp TGGTGGGGGAGGGGAGACACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGGAGGTGGCGTCATCCTaGGGGATGGCTCATCTAGGG +
Preference number: 2 (lower is better)
Translates to: WWGRGDTRPIVTDHSLSLEVASS*GMAHLG
Trigger: CCCTAGATGAGCCATCCCCCAGGATGACGCCACCTC...CAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGTGTCTCCCCTCCCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593184.5
3UTR-3UTR CCA 90 bp GCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGAACCAAGATCTCAGAGGTaGCGTCATCCTGGGGGATGG +
Preference number: 2 (lower is better)
Translates to: AGVSAWRPSAAGDPGFHEPRSQR*RHPGGW
Trigger: CCATCCCCCAGGATGACGCCACCTCTGAGATCTTGG...TTCGTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR TCA 90 bp TGGTGGGGGAGGGGAGACACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGAGGGGCCTGGGGTCATaGGTTCACCAAGGTAGCTCA +
Preference number: 2 (lower is better)
Translates to: WWGRGDTRPIVTDHSLSLRGLGS*VHQGSS
Trigger: TGAGCTACCTTGGTGAACTCATGACCCCAGGCCCCT...CAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGTGTCTCCCCTCCCCCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR TCA 90 bp GGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCACTTCCCAGCTGGCAGGGGCCTGGGGTCATaGGTTCACCAAGGTAGCTCA +
Preference number: 2 (lower is better)
Translates to: GPWLPRSWRRSCWHFPAGRGLGS*VHQGSS
Trigger: TGAGCTACCTTGGTGAACTCATGACCCCAGGCCCCT...GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR TCA 90 bp GAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACTGATAATGGGGCCCTaGGCCATCTTGGTTTGCCTT +
Preference number: 2 (lower is better)
Translates to: EGRCVCLASLSCRGPWLPLIMGP*AILVCL
Trigger: AAGGCAAACCAAGATGGCTCAGGGCCCCATTATCAG...TGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR-3UTR GCA 90 bp GTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCAGTTGGAGGCGTTCATaGTGGCACTTCCCAGCTGGC +
Preference number: 2 (lower is better)
Translates to: VAAWRVRTALGTWALSVISWRRS*WHFPAG
Trigger: GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACT...GATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR GCA 90 bp GTAGCTCAAGGACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAAGCCTTGGCGTCCCTCAGCTaGAGGGGACCCTGGCTTCCA +
Preference number: 2 (lower is better)
Translates to: VAQGQEETVVAEGPLVEALASLS*RGPWLP
Trigger: TGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAA...GGCTTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTCCTTGAGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR GCA 90 bp AGACACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGAGGGCAGGTGTGTCTaGTTGGCGTCCCTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: RHQAHSDRPFPVLVAAWREGRCV*LASLSC
Trigger: GCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTC...CCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CCA 90 bp GAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCATCGTGGCTTAGACACTaGGAGGTAGGGGTGGATAAC +
Preference number: 2 (lower is better)
Translates to: EGRCVCLASLSCRGPWLPSWLRH*EVGVDN
Trigger: GTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGA...TGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp AGCTGGCTGGGGAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACACCCCATCATACACGTaGAGACCAGAGCAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: SWLGRAGVSAWRPSAAGDTPSYT*RPEQGK
Trigger: TTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGT...GTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCCAGCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp GTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCGACAGGAAGAAACGGTaGTGGCAGAGGGTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: VAAWRVRTALGTWALSVIDRKKR*WQRVLW
Trigger: CCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTC...GATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp TGGGGGAGGGGAGACACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGACAGCCTTAGGGACGTaGGCGCTCTCAGTCATCTCG +
Preference number: 2 (lower is better)
Translates to: WGRGDTRPIVTDHSLSLSTALGT*ALSVIS
Trigger: CGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGT...CGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGTGTCTCCCCTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CCA 90 bp AATGGTGAGGGCGTTAGAAACTGGCGATCAGGGTTTCCTGGCCTCCGCACTGCTGCTTCTGGCTTGAGCTaGGCAGCACCGGGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: NGEGVRNWRSGFPGLRTAASGLS*AAPGGG
Trigger: CCCACCACCCGGTGCTGCCCAGCTCAAGCCAGAAGC...AGCAGTGCGGAGGCCAGGAAACCCTGATCGCCAGTTTCTAACGCCCTCACCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CCA 90 bp GAGGCTGGCATTAGGGGTCTCAGGAGGCGGCTACTGGACACCAGGGAAAGCCAGGGCCCTGAGCCATCTTaGTTTGCCTTGGGGAACCTC +
Preference number: 2 (lower is better)
Translates to: EAGIRGLRRRLLDTRESQGPEPS*FALGNL
Trigger: GAGGTTCCCCAAGGCAAACCAAGATGGCTCAGGGCC...CTGGCTTTCCCTGGTGTCCAGTAGCCGCCTCCTGAGACCCCTAATGCCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR-3UTR TCA 90 bp CTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGAGGGGCCTGGGGTCATaGGTTCACCAAGGTAGCTCA +
Preference number: 2 (lower is better)
Translates to: LRDVGALSHLAHTDRSWLRGLGS*VHQGSS
Trigger: TGAGCTACCTTGGTGAACTCATGACCCCAGGCCCCT...CAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR GCA 90 bp CTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGAGTTGGAGGCGTTCATaGTGGCACTTCCCAGCTGGC +
Preference number: 2 (lower is better)
Translates to: LRDVGALSHLAHTDRSWLSWRRS*WHFPAG
Trigger: GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACT...CAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp AGGGGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCACTTCCCAGCTGACAGGAAGAAACGGTaGTGGCAGAGGGTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: RGPWLPRSWRRSCWHFPADRKKR*WQRVLW
Trigger: CCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTC...AGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp GACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAAGCCTGGGCCTGAGGTCCTTGTCGCAGCATaGAGGGTCAGGACAGCCTTA +
Preference number: 2 (lower is better)
Translates to: DRKKRWWQRVLWSKPGPEVLVAA*RVRTAL
Trigger: TAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGAC...CTCAGGCCCAGGCTTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp AGGGCGTTAGAAACTGGCGATCAGGGTTTCCTGGCCTCCGCACTGCTGCCATGCGTTGAGCGGCTTCTCTaGTCTCCACCCACTCGATGC +
Preference number: 2 (lower is better)
Translates to: RALETGDQGFLASALLPCVERLL*SPPTRC
Trigger: GCATCGAGTGGGTGGAGACCAGAGAAGCCGCTCAAC...GCATGGCAGCAGTGCGGAGGCCAGGAAACCCTGATCGCCAGTTTCTAACGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CCA 90 bp GTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCGAGGGCGTTAGAAACTaGCGATCAGGGTTTCCTGGC +
Preference number: 2 (lower is better)
Translates to: VAAWRVRTALGTWALSVIEGVRN*RSGFPG
Trigger: GCCAGGAAACCCTGATCGCCAGTTTCTAACGCCCTC...GATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CCA 90 bp ATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCCAGCCAGAGCACCTaGAGGAGGTGTTCGGAGTTT +
Preference number: 2 (lower is better)
Translates to: IPCPCRSMEGQDSLRDVGASQST*RRCSEF
Trigger: AAACTCCGAACACCTCCTCCAGGTGCTCTGGCTGGC...GCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR-3UTR CCA 90 bp AGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACAAGGAACTCGAAGGCTaGTGGCTGCATTATTCGTGG +
Preference number: 2 (lower is better)
Translates to: RAGVSAWRPSAAGDPGFHKELEG*WLHYSW
Trigger: CCACGAATAATGCAGCCACCAGCCTTCGAGTTCCTT...GTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588572.6
3UTR CAA 90 bp GAACCTCGGGCTCACACAGGTCAAGAAGCTTGTCTAGGGTCACCCTaGGAGCCATCTGGGTGGGACAGTGTTGAGAACTGGGGACCCTGG +
Preference number: 2 (lower is better)
Translates to: EPRAHTGQEACLGSP*EPSGWDSVENWGPW
Trigger: CCAGGGTCCCCAGTTCTCAACACTGTCCCACCCAGATGGCTCCAAGGGTGACCCTAGACAAGCTTCTTGACCTGTGTGAGCCCGAGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR-3UTR TCA 90 bp GTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCAGGCAGAGGTTGCAGTaGGCTGAGATCGCATCATTG +
Preference number: 2 (lower is better)
Translates to: VAAWRVRTALGTWALSVIRQRLQ*AEIASL
Trigger: CAATGATGCGATCTCAGCTCACTGCAACCTCTGCCT...GATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CCA 90 bp AATGGTGAGGGCGTTAGAAACTGGCGATCAGGGTTTCCTGGCCTCCGCACTGCTAGCTGCAGGGGACCCTaGCTTCCACGAAGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: NGEGVRNWRSGFPGLRTASCRGP*LPRSWR
Trigger: CCTCCAACTTCGTGGAAGCCAGGGTCCCCTGCAGCT...AGCAGTGCGGAGGCCAGGAAACCCTGATCGCCAGTTTCTAACGCCCTCACCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CCA 90 bp GGAGACCAAGATCTCAGAGGTGGCGTCATCCTGGGGGATGGCTCATCTAGGGTGGCTTCAGTCAGAGGATaGGGCTTCCCCCTCCTAGGA +
Preference number: 2 (lower is better)
Translates to: GDQDLRGGVILGDGSSRVASVRG*GFPLLG
Trigger: TCCTAGGAGGGGGAAGCCCCATCCTCTGACTGAAGC...CACCCTAGATGAGCCATCCCCCAGGATGACGCCACCTCTGAGATCTTGGTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593184.5
3UTR CAA 90 bp AGCCCTCCTGTAGTTGAGTCCACACCCTGTGCCCTCACCCCATTCTaGGGTTGTGGTCAGAGACGGAGCCAGGAGACCAAGATCTCAGAG +
Preference number: 2 (lower is better)
Translates to: SPPVVESTPCALTPF*GCGQRRSQETKISE
Trigger: CTCTGAGATCTTGGTCTCCTGGCTCCGTCTCTGACCACAACCCAAGAATGGGGTGAGGGCACAGGGTGTGGACTCAACTACAGGAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR GCA 90 bp TGGTGGGGGAGGGGAGACACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGAAGATGCAGGATCACTaGATCTTCAGAGGAAGCCGC +
Preference number: 2 (lower is better)
Translates to: WWGRGDTRPIVTDHSLSLKMQDH*IFRGSR
Trigger: GCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTT...CAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGTGTCTCCCCTCCCCCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CCA 90 bp AATGGTGAGGGCGTTAGAAACTGGCGATCAGGGTTTCCTGGCCTCCGCACTGCTAGGAAGAAACGGTGGTaGCAGAGGGTCCTCTGGTCG +
Preference number: 2 (lower is better)
Translates to: NGEGVRNWRSGFPGLRTARKKRW*QRVLWS
Trigger: CGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCT...AGCAGTGCGGAGGCCAGGAAACCCTGATCGCCAGTTTCTAACGCCCTCACCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CCA 90 bp CCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTCGAAGGCTGGGACAGTGTTGAGAACTaGGGACCCTGGGCTGGCTCG +
Preference number: 2 (lower is better)
Translates to: PHHTRGDQSKGNKELEGWDSVEN*GPWAGS
Trigger: CGAGCCAGCCCAGGGTCCCCAGTTCTCAACACTGTC...CCAGCCTTCGAGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp CATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTCGAAGGCTGGTGGCTGGGCACTCCTTGGCCTTaGAGCCATCTGGGTGGGACA +
Preference number: 2 (lower is better)
Translates to: HTRGDQSKGNKELEGWWLGTPWP*SHLGGT
Trigger: TGTCCCACCCAGATGGCTCCAAGGCCAAGGAGTGCC...CAGCCACCAGCCTTCGAGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593184.5
3UTR-3UTR GCA 90 bp CCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGAAGATGCAGGATCACTaGATCTTCAGAGGAAGCCGC +
Preference number: 2 (lower is better)
Translates to: PFPVLVAAWRVRTALGTWKMQDH*IFRGSR
Trigger: GCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTT...CCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR GCA 90 bp TTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTCTGTGCCGCGAGACAAAAAGATaGAGGATCACTGCATCTTCA +
Preference number: 2 (lower is better)
Translates to: FCDSERGPAPVVLPAPLCRETKR*RITASS
Trigger: TGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCG...GCACAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp GAGCAAGGGAAACAAGGAACTCGAAGGCTGGTGGCTGGGAGGTTGCTGAGACTGTGGCTTCCACGAAGTTaGAGGCGTTCATGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: EQGKQGTRRLVAGRLLRLWLPRS*RRSCWH
Trigger: GTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCA...CAGTCTCAGCAACCTCCCAGCCACCAGCCTTCGAGTTCCTTGTTTCCCTTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR-3UTR CCA 90 bp TTCAGAGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTCTCCTCTGCCCGCTTCTGGCTTGAGCTaGGCAGCACCGGGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: FRAFITFSQVSVSASPLPASGLS*AAPGGG
Trigger: CCCACCACCCGGTGCTGCCCAGCTCAAGCCAGAAGC...GGGCAGAGGAGAGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCTCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR GCA 90 bp TATTCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCAAGATGCAGGATCACTaGATCTTCAGAGGAAGCCGC +
Preference number: 2 (lower is better)
Translates to: YSWLRHWEVGVDNRDPGLKMQDH*IFRGSR
Trigger: GCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTT...GAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR GCA 90 bp GGAGACCAAGATCTCAGAGGTGGCGTCATCCTGGGGGATGGCTCATCTAGGGTGAAGATGCAGGATCACTaGATCTTCAGAGGAAGCCGC +
Preference number: 2 (lower is better)
Translates to: GDQDLRGGVILGDGSSRVKMQDH*IFRGSR
Trigger: GCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTT...CACCCTAGATGAGCCATCCCCCAGGATGACGCCACCTCTGAGATCTTGGTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp ACCAAGGTAGCTCAAGGACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCTCGTGGCTTAGACACTaGGAGGTAGGGGTGGATAAC +
Preference number: 2 (lower is better)
Translates to: TKVAQGQEETVVAEGPLVSWLRH*EVGVDN
Trigger: GTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGA...GACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTCCTTGAGCTACCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp AGGGGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCACTTCCCAGCTTGGTGGCATTATTCGTaGCTTAGACACTGGGAGGTA +
Preference number: 2 (lower is better)
Translates to: RGPWLPRSWRRSCWHFPAWWHYS*LRHWEV
Trigger: TACCTCCCAGTGTCTAAGCCACGAATAATGCCACCA...AGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326529.9
3UTR-3UTR CCA 90 bp AGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTCTCCTCTGCCCCCACCGAACTCGAAGGCTGGTaGCTGGGTGACCTCACCAAC +
Preference number: 2 (lower is better)
Translates to: SVHHILTSFCIRLSSAPTELEGW*LGDLTN
Trigger: GTTGGTGAGGTCACCCAGCCACCAGCCTTCGAGTTC...GGTGGGGGCAGAGGAGAGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593184.5
3UTR-3UTR TCA 90 bp TTCAGAGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTCTCCTCTGCCCTCTCCAGACCTTGCCTaGTGTCCCCATGGCGGCCAA +
Preference number: 2 (lower is better)
Translates to: FRAFITFSQVSVSASPLPSPDLA*CPHGGQ
Trigger: TTGGCCGCCATGGGGACATCAGGCAAGGTCTGGAGA...GGGCAGAGGAGAGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR GCA 90 bp TGGTTCTGCCAGCGCCTCTGTGCATTCGTCAAGGCTCTGGGGACGTTGCATGAAAAGATGCAGGATCACTaGATCTTCAGAGGAAGCCGC +
Preference number: 2 (lower is better)
Translates to: WFCQRLCAFVKALGTLHEKMQDH*IFRGSR
Trigger: GCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTT...TTCATGCAACGTCCCCAGAGCCTTGACGAATGCACAGAGGCGCTGGCAGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR GCA 90 bp ACCAAGGTAGCTCAAGGACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCTCGAAGGCTGGTGGCTaGATTATTCGTGGCTTAGAC +
Preference number: 2 (lower is better)
Translates to: TKVAQGQEETVVAEGPLVSKAGG*IIRGLD
Trigger: GTCTAAGCCACGAATAATGCAGCCACCAGCCTTCGA...GACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTCCTTGAGCTACCTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588572.6
3UTR-3UTR CCA 90 bp GTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAAAGGAACTCGAAGGCTaGTGGCATTATTCGTGGCTT +
Preference number: 2 (lower is better)
Translates to: VRTALGTWALSVISPIQTKELEG*WHYSWL
Trigger: AAGCCACGAATAATGCCACCAGCCTTCGAGTTCCTT...TGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326529.9
3UTR-3UTR CCA 90 bp GGTCGAAGCCTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGTACCTGCATTATTCGTaGCTTAGACACTGGGAGGTA +
Preference number: 2 (lower is better)
Translates to: GRSLGLRTPSYTWRPEQGYLHYS*LRHWEV
Trigger: TACCTCCCAGTGTCTAAGCCACGAATAATGCAGGTA...CCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR-3UTR CCA 90 bp GTAGCTCAAGGACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAAGCCTGGCTGCATTATTCGTaGCTTAGACACTGGGAGGTA +
Preference number: 2 (lower is better)
Translates to: VAQGQEETVVAEGPLVEAWLHYS*LRHWEV
Trigger: TACCTCCCAGTGTCTAAGCCACGAATAATGCAGCCA...GGCTTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTCCTTGAGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588572.6
3UTR-3UTR GCA 90 bp ACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCACGCGAGACAAAAAGATaGAGGATCACTGCATCTTCA +
Preference number: 2 (lower is better)
Translates to: TRPIVTDHSLSLSQHGGSRETKR*RITASS
Trigger: TGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCG...TGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CCA 90 bp GGAGACCAAGATCTCAGAGGTGGCGTCATCCTGGGGGATGGCTCATCTAGGGTGATCTACCATTATTCGTaGCTTAGACACTGGGAGGTA +
Preference number: 2 (lower is better)
Translates to: GDQDLRGGVILGDGSSRVIYHYS*LRHWEV
Trigger: TACCTCCCAGTGTCTAAGCCACGAATAATGGTAGAT...CACCCTAGATGAGCCATCCCCCAGGATGACGCCACCTCTGAGATCTTGGTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593184.5
3UTR-3UTR GCA 90 bp CATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTCGAAGGCTGGTGGCTGCGCGAGACAAAAAGATaGAGGATCACTGCATCTTCA +
Preference number: 2 (lower is better)
Translates to: HTRGDQSKGNKELEGWWLRETKR*RITASS
Trigger: TGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCG...CAGCCACCAGCCTTCGAGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR GCA 72 bp GGGGAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTaGAGGGGACCCTGGCTTCCACGAAGTTGGAGGCGT +
Preference number: 3 (lower is better)
Translates to: GEGRCVCLASLS*RGPWLPRSWRR
Trigger: ACGCCTCCAACTTCGTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CAA 90 bp CGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGAGGGCCTGGGTGGGACAGTGTaGAGAACTGGGGACCCTGGG +
Preference number: 3 (lower is better)
Translates to: RGRSQSSRPYRQELAGEGLGGTV*RTGDPG
Trigger: CCCAGGGTCCCCAGTTCTCAACACTGTCCCACCCAG...GCCCTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR CCA 72 bp GGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTaGCTGGGGAGGGCAGGTGTGTCTGCTTGGCGTCCC +
Preference number: 3 (lower is better)
Translates to: GALSHLAHTDRS*LGRAGVSAWRP
Trigger: GGGACGCCAAGCAGACACACCTGCCCTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CAA 90 bp GAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACTCAGGGAGTACCCGTaGGGAAAACCAGCACCCCAG +
Preference number: 3 (lower is better)
Translates to: EGRCVCLASLSCRGPWLPLREYP*GKPAPQ
Trigger: CTGGGGTGCTGGTTTTCCCAACGGGTACTCCCTGAG...TGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593184.5
3UTR GCA 72 bp AGGGGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATaGTGGCACTTCCCAGCTGGCAGGACCTGGGGGACA +
Preference number: 3 (lower is better)
Translates to: RGPWLPRSWRRS*WHFPAGRTWGT
Trigger: TGTCCCCCAGGTCCTGCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR GCA 72 bp TCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTaGCAGCGCCTCTGTGCATTCGTCAAGGCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: SVTQRGVLPPWF*QRLCAFVKALG
Trigger: CCCCAGAGCCTTGACGAATGCACAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR GCA 72 bp AGCCAGCCAGAGCACCTGGAGGAGGTGTTCGGAGTTTaGACAGGTGATGGTCCACCAGGCTGGAGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: SQPEHLEEVFGV*TGDGPPGWRPG
Trigger: GCCTGGCCTCCAGCCTGGTGGACCATCACCTGTGCAAACTCCGAACACCTCCTCCAGGTGCTCTGGCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR CCA 72 bp GGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTaGCACTTCCCAGCTGGCAGGACCTGGGGGACATCC +
Preference number: 3 (lower is better)
Translates to: GPWLPRSWRRSC*HFPAGRTWGTS
Trigger: GGATGTCCCCCAGGTCCTGCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CAA 90 bp CAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGGGCAGGTGTGTCTGCTaGGCGTCCCTCAGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: QAHSDRPFPVLVAAWRVRGRCVC*ASLSCR
Trigger: CCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCC...CCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CAA 90 bp CCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTGCCCTCACCCCATTCTaGGGTTGTGGTCAGAGACGG +
Preference number: 3 (lower is better)
Translates to: PCRSMEGQDSLRDVGALSALTPF*GCGQRR
Trigger: CCGTCTCTGACCACAACCCAAGAATGGGGTGAGGGC...ACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR CCA 72 bp TGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTaGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCAC +
Preference number: 3 (lower is better)
Translates to: CVCLASLSCRGP*LPRSWRRSCWH
Trigger: GTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CAA 90 bp GGAGCATGCCTCTGCCCCAACCAAAAATGTCTCCAGACCTTGCCTGATGTCCCCGGCAGGTGTGTCTGCTaGGCGTCCCTCAGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: GACLCPNQKCLQTLPDVPGRCVC*ASLSCR
Trigger: CCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCC...GGGGACATCAGGCAAGGTCTGGAGACATTTTTGGTTGGGGCAGAGGCATGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CAA 90 bp CATTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTCTGTCACCCCATTCTTGGGTaGTGGTCAGAGACGGAGCCA +
Preference number: 3 (lower is better)
Translates to: HSVTQRGVLPPWFCQRLCHPILG*WSETEP
Trigger: TGGCTCCGTCTCTGACCACAACCCAAGAATGGGGTG...ACAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR TCA 72 bp GTGGTGGCAGAGGGTCCTCTGGTCGAAGCCTGGGCCTaGGAACCCCATCATACACGTGGAGACCAGAGCAAG +
Preference number: 3 (lower is better)
Translates to: VVAEGPLVEAWA*EPHHTRGDQSK
Trigger: CTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGACCAGAGGACCCTCTGCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR TCA 72 bp GATCAGGGTTTCCTGGCCTCCGCACTGCTGCCATGCTaGGCTGGTGTTTCTAGGCAGGGCCTGTCCCATGCA +
Preference number: 3 (lower is better)
Translates to: DQGFLASALLPC*AGVSRQGLSHA
Trigger: TGCATGGGACAGGCCCTGCCTAGAAACACCAGCTCAGCATGGCAGCAGTGCGGAGGCCAGGAAACCCTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR CCA 72 bp GTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTaGGCGCTCTCAGTCATCTCGCCCATACAGACAGGA +
Preference number: 3 (lower is better)
Translates to: VAAWRVRTALGT*ALSVISPIQTG
Trigger: TCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR CCA 72 bp CATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATaGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTC +
Preference number: 3 (lower is better)
Translates to: HSDRPFPVLVAA*RVRTALGTWAL
Trigger: GAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR CCA 72 bp CTCCATTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTaGTTCTGCCAGCGCCTCTGTGCATTCGTCAAGGCT +
Preference number: 3 (lower is better)
Translates to: LHSVTQRGVLPP*FCQRLCAFVKA
Trigger: AGCCTTGACGAATGCACAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAATGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CAA 90 bp CAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGAAGGCTCTGGGGACGTaGCATGAACAGGAAGCCCTC +
Preference number: 3 (lower is better)
Translates to: QAHSDRPFPVLVAAWRVRKALGT*HEQEAL
Trigger: GAGGGCTTCCTGTTCATGCAACGTCCCCAGAGCCTT...CCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR GCA 72 bp AAACTGGCGATCAGGGTTTCCTGGCCTCCGCACTGCTaGCATGCTGAGCTGGTGTTTCTAGGCAGGGCCTGT +
Preference number: 3 (lower is better)
Translates to: KLAIRVSWPPHC*HAELVFLGRAC
Trigger: ACAGGCCCTGCCTAGAAACACCAGCTCAGCATGGCAGCAGTGCGGAGGCCAGGAAACCCTGATCGCCAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR CCA 72 bp CTCGAAGGCTGGTGGCATTATTCGTGGCTTAGACACTaGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTC +
Preference number: 3 (lower is better)
Translates to: LEGWWHYSWLRH*EVGVDNRDPGL
Trigger: GAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATGCCACCAGCCTTCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326529.9
3UTR CCA 72 bp GGCTACTGGACACCAGGGAAAGCCAGCCAGAGCACCTaGAGGAGGTGTTCGGAGTTTGCACAGGTGATGGTC +
Preference number: 3 (lower is better)
Translates to: GYWTPGKASQST*RRCSEFAQVMV
Trigger: GACCATCACCTGTGCAAACTCCGAACACCTCCTCCAGGTGCTCTGGCTGGCTTTCCCTGGTGTCCAGTAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR CCA 72 bp GAAGGCTGGTGGCTGCATTATTCGTGGCTTAGACACTaGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTC +
Preference number: 3 (lower is better)
Translates to: EGWWLHYSWLRH*EVGVDNRDPGL
Trigger: GAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATGCAGCCACCAGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588572.6
3UTR-3UTR CAA 90 bp CCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTATGCATTGCAGGATGTaGAGCGGCTTCTCTGGTCTC +
Preference number: 3 (lower is better)
Translates to: PCRSMEGQDSLRDVGALSMHCRM*SGFSGL
Trigger: GAGACCAGAGAAGCCGCTCAACATCCTGCAATGCAT...ACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CAA 90 bp ATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTGAGATCGCATCATaGTACTCCAGCCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: IPCPCRSMEGQDSLRDVGAEIAS*YSSLGD
Trigger: GTCACCCAGGCTGGAGTACAATGATGCGATCTCAGC...GCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CAA 90 bp GTAGCTCAAGGACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAAGCCCACCCCATTCTTGGGTaGTGGTCAGAGACGGAGCCA +
Preference number: 3 (lower is better)
Translates to: VAQGQEETVVAEGPLVEAHPILG*WSETEP
Trigger: TGGCTCCGTCTCTGACCACAACCCAAGAATGGGGTG...GGCTTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTCCTTGAGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR-3UTR CAA 90 bp GGTCGAAGCCTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGATGCATTGCAGGATGTaGAGCGGCTTCTCTGGTCTC +
Preference number: 3 (lower is better)
Translates to: GRSLGLRTPSYTWRPEQGMHCRM*SGFSGL
Trigger: GAGACCAGAGAAGCCGCTCAACATCCTGCAATGCAT...CCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR GCA 72 bp GATAACCGAGACCCGGGGCTCCGCGAGACAAAAAGATaGAGGATCACTGCATCTTCAGAGGAAGCCGCGCTG +
Preference number: 3 (lower is better)
Translates to: DNRDPGLRETKR*RITASSEEAAL
Trigger: CAGCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
3UTR CCA 72 bp AAGGACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTaGTCGAAGCCTGGGCCTGAGAACCCCATCATACAC +
Preference number: 3 (lower is better)
Translates to: KDRKKRWWQRVL*SKPGPENPIIH
Trigger: GTGTATGATGGGGTTCTCAGGCCCAGGCTTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR CCA 72 bp ACGCGAGGCATCTACCATTATTCGTGGCTTAGACACTaGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTC +
Preference number: 3 (lower is better)
Translates to: TRGIYHYSWLRH*EVGVDNRDPGL
Trigger: GAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATGGTAGATGCCTCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593184.5
3UTR CCA 72 bp GGTTCTGCCAGCGCCTCTGTGCATTCGTCAAGGCTCTaGGGACGTTGCATGAACAGGAAGCCCTCCTGTAGT +
Preference number: 3 (lower is better)
Translates to: GSASASVHSSRL*GRCMNRKPSCS
Trigger: ACTACAGGAGGGCTTCCTGTTCATGCAACGTCCCCAGAGCCTTGACGAATGCACAGAGGCGCTGGCAGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR CCA 72 bp CGAGGCATCTACCTGCATTATTCGTGGCTTAGACACTaGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTC +
Preference number: 3 (lower is better)
Translates to: RGIYLHYSWLRH*EVGVDNRDPGL
Trigger: GAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATGCAGGTAGATGCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR TCA 72 bp TCATCTAGGGTGTGTCCTCCTCTGATAATGGGGCCCTaGGCCATCTTGGTTTGCCTTGGGGAACCTCGGGCT +
Preference number: 3 (lower is better)
Translates to: SSRVCPPLIMGP*AILVCLGEPRA
Trigger: AGCCCGAGGTTCCCCAAGGCAAACCAAGATGGCTCAGGGCCCCATTATCAGAGGAGGACACACCCTAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR CCA 72 bp GGTCGAAGCCTGGGCCTGAGAACCCCATCATACACGTaGAGACCAGAGCAAGGGAAACAAGGAACTCGAAGG +
Preference number: 3 (lower is better)
Translates to: GRSLGLRTPSYT*RPEQGKQGTRR
Trigger: CCTTCGAGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
3UTR CCA 72 bp ACCAAAAATGTCTCCAGACCTTGCCTGATGTCCCCATaGCGGCCAAAGTCAGCTTCTGGCTTGAGCTGGGCA +
Preference number: 3 (lower is better)
Translates to: TKNVSRPCLMSP*RPKSASGLSWA
Trigger: TGCCCAGCTCAAGCCAGAAGCTGACTTTGGCCGCCATGGGGACATCAGGCAAGGTCTGGAGACATTTTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR CCA 72 bp TCTGATAATGGGGCCCTGAGCCATCTTGGTTTGCCTTaGGGAACCTCGGGCTCACACAGGTCAAGAAGCTTG +
Preference number: 3 (lower is better)
Translates to: SDNGALSHLGLP*GTSGSHRSRSL
Trigger: CAAGCTTCTTGACCTGTGTGAGCCCGAGGTTCCCCAAGGCAAACCAAGATGGCTCAGGGCCCCATTATCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR-3UTR CAA 90 bp AGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTCTCCTCTGCCCCCACCAAATGTCTCCAGACCTaGCCTGATGTCCCCATGGCG +
Preference number: 3 (lower is better)
Translates to: SVHHILTSFCIRLSSAPTKCLQT*PDVPMA
Trigger: CGCCATGGGGACATCAGGCAAGGTCTGGAGACATTT...GGTGGGGGCAGAGGAGAGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CAA 90 bp TTCAGAGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTCTCCTCTGCCCCTGGCTTCCACGAAGTaGGAGGCGTTCATGCTGGCA +
Preference number: 3 (lower is better)
Translates to: FRAFITFSQVSVSASPLPLASTK*EAFMLA
Trigger: TGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAG...GGGCAGAGGAGAGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR-3UTR CAA 90 bp TTTATAGGGGGTTCAGAGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTAAATGTCTCCAGACCTaGCCTGATGTCCCCATGGCG +
Preference number: 3 (lower is better)
Translates to: FIGGSERSSHSHKFLYPPKCLQT*PDVPMA
Trigger: CGCCATGGGGACATCAGGCAAGGTCTGGAGACATTT...AGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCTCTGAACCCCCTATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp GCTGGGGAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGGGATCTGCTGTGGGATaGTCCCGGGGTGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: AGEGRCVCLASLSCRGPWGSAVG*SRGAAR
Trigger: GCGAGCGGCACCCCGGGACCATCCCACAGCAGATCC...CCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000326529.9
ENST00000593184.5
CDS-3UTR CCA 90 bp GAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACTGGGCAGCACCGGGTaGTGGGGGAGGGGAGACACC +
Preference number: 4 (lower is better)
Translates to: EGRCVCLASLSCRGPWLPLGSTG*WGRGDT
Trigger: GGTGTCTCCCCTCCCCCACCACCCGGTGCTGCCCAG...TGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp AGCTGGCTGGGGAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACGATGGTCCACCAGGCTaGAGGCCAGGCCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SWLGRAGVSAWRPSAAGDDGPPG*RPGRAG
Trigger: ACCTGCCCGGCCTGGCCTCCAGCCTGGTGGACCATC...GTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCCAGCCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR GCA 90 bp CTGGCTGGGGAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTTGGCGTCCCTCAGCTaGAGGGGACCCTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LAGEGRCVCLASLSCRGPLASLS*RGPWLP
Trigger: TGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAA...GGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCCAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp TCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCCTGGGCAGCACCGGGTaGTGGGGGAGGGGAGACACC +
Preference number: 4 (lower is better)
Translates to: SWLRHWEVGVDNRDPGLRLGSTG*WGRGDT
Trigger: GGTGTCTCCCCTCCCCCACCACCCGGTGCTGCCCAG...GCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp AGCTGGCTGGGGAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACGCTTCTGGCTTGAGCTaGGCAGCACCGGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SWLGRAGVSAWRPSAAGDASGLS*AAPGGG
Trigger: CCCACCACCCGGTGCTGCCCAGCTCAAGCCAGAAGC...GTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCCAGCCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR TCA 90 bp AGCTGGCTGGGGAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACAGCTCTCCACCCAGCTaGTGGGGCACAGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: SWLGRAGVSAWRPSAAGDSSPPS*WGTASG
Trigger: ACCACTCGCTGTGCCCCATCAGCTGGGTGGAGAGCT...GTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCCAGCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp AGCTGGCTGGGGAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACGAGGGCAGGTGTGTCTaGTTGGCGTCCCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SWLGRAGVSAWRPSAAGDEGRCV*LASLSC
Trigger: GCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTC...GTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCCAGCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp AGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACCCACTGGATCTGCTGTaGGATGGTCCCGGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: RAGVSAWRPSAAGDPGFHPLDLL*DGPGVP
Trigger: CGGCACCCCGGGACCATCCCACAGCAGATCCAGTGG...GTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326529.9
ENST00000593184.5
CDS-3UTR TCA 90 bp AGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGAGGCAACTCCAGCCTaGCGTTGGCGGCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: RAGVSAWRPSAAGDPGFHEATPA*RWRPLD
Trigger: ATCCAGTGGCCGCCAACGTCAGGCTGGAGTTGCCTC...GTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp AGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGGATCTGGTTCTGGCTaGGGAAGCGCGGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: RAGVSAWRPSAAGDPGFHGSGSG*GSAGRR
Trigger: CCTTCGACCCGCGCTTCCCCAGCCAGAACCAGATCC...GTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CTGGCTGGGGAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCGACAGGAAGAAACGGTaGTGGCAGAGGGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LAGEGRCVCLASLSCRGPDRKKR*WQRVLW
Trigger: CCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTC...GGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCCAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGAGGGCGCAGGTGTGTCTGCTTaGCGTCCCTCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RGRSQSSRPYRQELAGEGAGVSA*RPSAAG
Trigger: CCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGC...GCCCTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp AGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGCAGGTGTGTCTGCTTaGCGTCCCTCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RAGVSAWRPSAAGDPGFHAGVSA*RPSAAG
Trigger: CCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGC...GTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CTGGCTGGGGAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCACAGCCTTAGGGACGTaGGCGCTCTCAGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: LAGEGRCVCLASLSCRGPTALGT*ALSVIS
Trigger: CGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGT...GGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCCAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp AGGGGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCACTTCCCAGCTGGCAGCACCGGGTGGTaGGGGAGGGGAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: RGPWLPRSWRRSCWHFPAGSTGW*GRGDTR
Trigger: CCTGGTGTCTCCCCTCCCCCACCACCCGGTGCTGCC...AGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp TGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCGAGGCTTCTGGCTTGAGCTaGGCAGCACCGGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: WLRHWEVGVDNRDPGLREASGLS*AAPGGG
Trigger: CCCACCACCCGGTGCTGCCCAGCTCAAGCCAGAAGC...CTCGCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp AGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGCTGGGGACCCTGGGCTaGCTCGTAGCTGTCAACGCG +
Preference number: 4 (lower is better)
Translates to: RDVGALSHLAHTDRSWLGLGTLG*LVAVNA
Trigger: CGCGTTGACAGCTACGAGCCAGCCCAGGGTCCCCAG...CCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GCTGGGGAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGTCAAGCGGCACTCCTTaGCCTTGGAGCCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: AGEGRCVCLASLSCRGPWSSGTP*PWSHLG
Trigger: ACCCAGATGGCTCCAAGGCCAAGGAGTGCCGCTTGA...CCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR GCA 90 bp GGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGAGTTGGCGTCCCTCAGCTaGAGGGGACCCTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GRGRSQSSRPYRQELAGELASLS*RGPWLP
Trigger: TGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAA...CTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp GTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGAGGGCATCCTGGCCTCCGCACTaGTGCCATGCTGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VGALSHLAHTDRSWLGRASWPPH*CHAELV
Trigger: CACCAGCTCAGCATGGCAGCAGTGCGGAGGCCAGGA...TGCCCTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp ATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGGATCTGCTGTGGGATaGTCCCGGGGTGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: IPCPCRSMEGQDSLRDVGGSAVG*SRGAAR
Trigger: GCGAGCGGCACCCCGGGACCATCCCACAGCAGATCC...GCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326529.9
ENST00000593184.5
CDS-3UTR CCA 90 bp TGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCGAGTGGCAGAGGGTCCTCTaGTCGAAGCCTGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: WLRHWEVGVDNRDPGLREWQRVL*SKPGPE
Trigger: CTCAGGCCCAGGCTTCGACCAGAGGACCCTCTGCCA...CTCGCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGAACTGGCACTTCCCAGCTaGCAGGACCTGGGGGACATC +
Preference number: 4 (lower is better)
Translates to: AGVSAWRPSAAGDPGFHELALPS*QDLGDI
Trigger: GATGTCCCCCAGGTCCTGCCAGCTGGGAAGTGCCAG...TTCGTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp AGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACCATACAGACAGGAGCTaGCTGGGGAGGGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RAGVSAWRPSAAGDPGFHHTDRS*LGRAGV
Trigger: CACACCTGCCCTCCCCAGCCAGCTCCTGTCTGTATG...GTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GCTGGGGAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGTTTGGGAGGCTGAGGTaGGCAGATTGCCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: AGEGRCVCLASLSCRGPWFGRLR*ADCLRS
Trigger: TGACCTCAGGCAATCTGCCCACCTCAGCCTCCCAAA...CCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
3UTR CAA 72 bp GTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGAAGTaGGAGGCGTTCATGCTGGCACTTCCCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VPQLQGTLASTK*EAFMLALPSWQ
Trigger: CTGCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCCCCTGCAGCTGAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp CTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCGAGACAAGCTCTCCACCCAGCTaGTGGGGCACAGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: LRHWEVGVDNRDPGLRETSSPPS*WGTASG
Trigger: ACCACTCGCTGTGCCCCATCAGCTGGGTGGAGAGCT...TGTCTCGCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp GAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCAAGGGGCCTGGGGTCATaGGTTCACCAAGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: EGRCVCLASLSCRGPWLPRGLGS*VHQGSS
Trigger: TGAGCTACCTTGGTGAACTCATGACCCCAGGCCCCT...TGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp CGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGAGGGCAGGGGCCTGGGGTCATaGGTTCACCAAGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: RGRSQSSRPYRQELAGEGRGLGS*VHQGSS
Trigger: TGAGCTACCTTGGTGAACTCATGACCCCAGGCCCCT...GCCCTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp CATTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTCTGTGCAGTGGCGGCTGGGTaGCCTCACCAACTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: HSVTQRGVLPPWFCQRLCAVAAG*PHQLSS
Trigger: GGAGCTAAGTTGGTGAGGTCACCCAGCCGCCACTGC...ACAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR TCA 90 bp GCTCCATTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTAGGCTGGTGGCTGGGTaGCCTCACCAACTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: APFCDSERGPAPVVLPAPRLVAG*PHQLSS
Trigger: GGAGCTAAGTTGGTGAGGTCACCCAGCCACCAGCCT...AGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAATGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR GCA 90 bp CCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTGAGGGCAGGTGTGTCTaGTTGGCGTCCCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PCRSMEGQDSLRDVGALSEGRCV*LASLSC
Trigger: GCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTC...ACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp GCTGGGGAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGGAGGTGTTCGGAGTTTaGACAGGTGATGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: AGEGRCVCLASLSCRGPWEVFGV*TGDGPP
Trigger: TGGTGGACCATCACCTGTGCAAACTCCGAACACCTC...CCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTCCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR CCA 90 bp GAGGCTGGCATTAGGGGTCTCAGGAGGCGGCTACTGGACACCAGGGAAAGCCAGGGATCTGGTTCTGGCTaGGGAAGCGCGGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: EAGIRGLRRRLLDTRESQGSGSG*GSAGRR
Trigger: CCTTCGACCCGCGCTTCCCCAGCCAGAACCAGATCC...CTGGCTTTCCCTGGTGTCCAGTAGCCGCCTCCTGAGACCCCTAATGCCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR CCA 90 bp TTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTCTGTGCTTACGGATCTGGTTCTaGCTGGGGAAGCGCGGGTCG +
Preference number: 4 (lower is better)
Translates to: FCDSERGPAPVVLPAPLCLRIWF*LGKRGS
Trigger: CGACCCGCGCTTCCCCAGCCAGAACCAGATCCGTAA...GCACAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCAAGGAAGAAACGGTGGTaGCAGAGGGTCCTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: EGRCVCLASLSCRGPWLPRKKRW*QRVLWS
Trigger: CGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCT...TGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGAGGGCATGGAGGCGTTCATGCTaGCACTTCCCAGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VGALSHLAHTDRSWLGRAWRRSC*HFPAGR
Trigger: CCTGCCAGCTGGGAAGTGCCAGCATGAACGCCTCCA...TGCCCTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCACTTCCCAGCTGGCGCAGGTGTGTCTGCTTaGCGTCCCTCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GPWLPRSWRRSCWHFPAGAGVSA*RPSAAG
Trigger: CCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGC...GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGAGCATACAGACAGGAGCTaGCTGGGGAGGGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: GRGRSQSSRPYRQELAGEHTDRS*LGRAGV
Trigger: CACACCTGCCCTCCCCAGCCAGCTCCTGTCTGTATG...CTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp TGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCGAGCATACAGACAGGAGCTaGCTGGGGAGGGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: WLRHWEVGVDNRDPGLREHTDRS*LGRAGV
Trigger: CACACCTGCCCTCCCCAGCCAGCTCCTGTCTGTATG...CTCGCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp TGGTTCTGCCAGCGCCTCTGTGCATTCGTCAAGGCTCTGGGGACGTTGCATGAAGGCAGCACCGGGTGGTaGGGGAGGGGAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: WFCQRLCAFVKALGTLHEGSTGW*GRGDTR
Trigger: CCTGGTGTCTCCCCTCCCCCACCACCCGGTGCTGCC...TTCATGCAACGTCCCCAGAGCCTTGACGAATGCACAGAGGCGCTGGCAGAACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR CCA 90 bp GATGTCCCCATGGCGGCCAAAGTCAGCTTCTGGCTTGAGCTGGGCAGCACCGGGGACAGTGTTGAGAACTaGGGACCCTGGGCTGGCTCG +
Preference number: 4 (lower is better)
Translates to: DVPMAAKVSFWLELGSTGDSVEN*GPWAGS
Trigger: CGAGCCAGCCCAGGGTCCCCAGTTCTCAACACTGTC...CCCGGTGCTGCCCAGCTCAAGCCAGAAGCTGACTTTGGCCGCCATGGGGACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR CCA 90 bp GCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGGGGTCCTGCCCCCGTaGTTCTGCCAGCGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: AHSDRPFPVLVAAWRVRTGVLPP*FCQRLC
Trigger: ACAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCC...TGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGGGTCCTGCCCCCGTaGTTCTGCCAGCGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: VRTALGTWALSVISPIQTGVLPP*FCQRLC
Trigger: ACAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCC...TGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GCTCCATTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTGGCACTCCTTGGCCTTaGAGCCATCTGGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: APFCDSERGPAPVVLPAPGTPWP*SHLGGT
Trigger: TGTCCCACCCAGATGGCTCCAAGGCCAAGGAGTGCC...AGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAATGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR CCA 90 bp AGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGCTTCAGTCAGAGGATaGGGCTTCCCCCTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: RAGVSAWRPSAAGDPGFHASVRG*GFPLLG
Trigger: TCCTAGGAGGGGGAAGCCCCATCCTCTGACTGAAGC...GTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR TCA 90 bp GTAGCTCAAGGACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAAGCCGGCGGGTCCTGGTCTTaGGGCAGCGGTGGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: VAQGQEETVVAEGPLVEAGGSWS*GSGGSP
Trigger: TGGACTACCACCGCTGCCTCAAGACCAGGACCCGCC...GGCTTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTCCTTGAGCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp AGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGAGCTCTCCACCCAGCTaGTGGGGCACAGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: RVRTALGTWALSVISPIQSSPPS*WGTASG
Trigger: ACCACTCGCTGTGCCCCATCAGCTGGGTGGAGAGCT...CTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp GCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGAAGGTGGGCAGATTGCCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: AGVSAWRPSAAGDPGFHEGGQIA*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGCAATCTGCCCACC...TTCGTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR TCA 90 bp CGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGAGGGCTCTGGGGACGTTGCATaGACAGGAAGCCCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: RGRSQSSRPYRQELAGEGSGDVA*TGSPPV
Trigger: TACAGGAGGGCTTCCTGTTCATGCAACGTCCCCAGA...GCCCTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp CGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCGCGCTGGGGGGGATGGTCCCGGGGTaGCGCTCGCTTCTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: RETKRCRITASSEEAALGGMVPG*RSLLSP
Trigger: CGGACTCAGAAGCGAGCGGCACCCCGGGACCATCCC...CCCCAGCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000326529.9
ENST00000589467.1
CDS-3UTR GCA 90 bp GGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCGCGCGGCGGCCACTGGATCTaGTGTGGGATGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GSARQKDAGSLHLQRKPRGGHWI*CGMVPG
Trigger: CCCCGGGACCATCCCACAGCAGATCCAGTGGCCGCC...GCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000589467.1
ENST00000593184.5
CDS-3UTR GCA 90 bp AATGGTGAGGGCGTTAGAAACTGGCGATCAGGGTTTCCTGGCCTCCGCACTGCTGGCGGCCACTGGATCTaGTGTGGGATGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: NGEGVRNWRSGFPGLRTAGGHWI*CGMVPG
Trigger: CCCCGGGACCATCCCACAGCAGATCCAGTGGCCGCC...AGCAGTGCGGAGGCCAGGAAACCCTGATCGCCAGTTTCTAACGCCCTCACCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326529.9
ENST00000593184.5
CDS-3UTR GCA 90 bp GGTCGAAGCCTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGGAGGGCAGGTGTGTCTaGTTGGCGTCCCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GRSLGLRTPSYTWRPEQGEGRCV*LASLSC
Trigger: GCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTC...CCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp AGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGTCCTGGCCTCCGCACTaGTGCCATGCTGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RVRTALGTWALSVISPIQSWPPH*CHAELV
Trigger: CACCAGCTCAGCATGGCAGCAGTGCGGAGGCCAGGA...CTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp CATTATTCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGGGATCTGCTGTGGGATaGTCCCGGGGTGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: HYSWLRHWEVGVDNRDPGGSAVG*SRGAAR
Trigger: GCGAGCGGCACCCCGGGACCATCCCACAGCAGATCC...CCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000589467.1
ENST00000593184.5
CDS-3UTR CCA 90 bp CTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCGAGACAGACGTTGGCGGCCACTaGATCTGCTGTGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: LRHWEVGVDNRDPGLRETDVGGH*ICCGMV
Trigger: GACCATCCCACAGCAGATCCAGTGGCCGCCAACGTC...TGTCTCGCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000593184.5
CDS-3UTR CCA 90 bp CATTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTCTGTTCGACCATTTCCCCTTaGGGGGCTCCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: HSVTQRGVLPPWFCQRLCSTISP*GAPGLP
Trigger: TGGAAGCCCAGGAGCCCCCCAAGGGGAAATGGTCGA...ACAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCACTTCCCAGCTGGCGGTGGAGCAGGGGCCTaGGGTCATGAGTTCACCAAG +
Preference number: 4 (lower is better)
Translates to: GPWLPRSWRRSCWHFPAGGGAGA*GHEFTK
Trigger: CTTGGTGAACTCATGACCCCAGGCCCCTGCTCCACC...GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GGTCGAAGCCTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGCTGGCACTTCCCAGCTaGCAGGACCTGGGGGACATC +
Preference number: 4 (lower is better)
Translates to: GRSLGLRTPSYTWRPEQGLALPS*QDLGDI
Trigger: GATGTCCCCCAGGTCCTGCCAGCTGGGAAGTGCCAG...CCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTTGGAGGCGTTCATGCTaGCACTTCCCAGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PCRSMEGQDSLRDVGALSWRRSC*HFPAGR
Trigger: CCTGCCAGCTGGGAAGTGCCAGCATGAACGCCTCCA...ACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCACTTCCCAGCTGGCGAGGTGGCGTCATCCTaGGGGATGGCTCATCTAGGG +
Preference number: 4 (lower is better)
Translates to: GPWLPRSWRRSCWHFPAGEVASS*GMAHLG
Trigger: CCCTAGATGAGCCATCCCCCAGGATGACGCCACCTC...GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTGACAGTGTTGAGAACTaGGGACCCTGGGCTGGCTCG +
Preference number: 4 (lower is better)
Translates to: PCRSMEGQDSLRDVGALSDSVEN*GPWAGS
Trigger: CGAGCCAGCCCAGGGTCCCCAGTTCTCAACACTGTC...ACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GTAGCTCAAGGACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAAGCCGCATCAGTGGGGCAGTaGCGGCTGGGTGACCTCACC +
Preference number: 4 (lower is better)
Translates to: VAQGQEETVVAEGPLVEAASVGQ*RLGDLT
Trigger: GGTGAGGTCACCCAGCCGCCACTGCCCCACTGATGC...GGCTTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTCCTTGAGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR CCA 90 bp GTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACATGGCTCAGGCATCAGTaGGGCAGTGGCGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VRTALGTWALSVISPIQTWLRHQ*GSGGWV
Trigger: CACCCAGCCGCCACTGCCCCACTGATGCCTGAGCCA...TGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR CCA 90 bp TTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTCTGTGCAAGGAACTCGAAGGCTaGTGGCTGGGTGACCTCACC +
Preference number: 4 (lower is better)
Translates to: FCDSERGPAPVVLPAPLCKELEG*WLGDLT
Trigger: GGTGAGGTCACCCAGCCACCAGCCTTCGAGTTCCTT...GCACAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593184.5
3UTR CAA 72 bp GCTCCCTCAGCAGGACCAGGCTGGAACCCTAGGGCTTaGTCAAGCGGCACTCCTTGGCCTTGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: APSAGPGWNPRA*SSGTPWPWSHL
Trigger: CAGATGGCTCCAAGGCCAAGGAGTGCCGCTTGACAAAGCCCTAGGGTTCCAGCCTGGTCCTGCTGAGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR TCA 90 bp GTAGCTCAAGGACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAAGCCGAGGCAACTCCAGCCTaGCGTTGGCGGCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: VAQGQEETVVAEGPLVEAEATPA*RWRPLD
Trigger: ATCCAGTGGCCGCCAACGTCAGGCTGGAGTTGCCTC...GGCTTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTCCTTGAGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR TCA 90 bp GTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCAGGGGCCTGGGGTCATaGGTTCACCAAGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: VAAWRVRTALGTWALSVIRGLGS*VHQGSS
Trigger: TGAGCTACCTTGGTGAACTCATGACCCCAGGCCCCT...GATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp CTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCGAGACAAGGGGCCTGGGGTCATaGGTTCACCAAGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: LRHWEVGVDNRDPGLRETRGLGS*VHQGSS
Trigger: TGAGCTACCTTGGTGAACTCATGACCCCAGGCCCCT...TGTCTCGCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp AGGGCGTTAGAAACTGGCGATCAGGGTTTCCTGGCCTCCGCACTGCTGCCATGCTCTCCAGACCTTGCCTaGTGTCCCCATGGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: RALETGDQGFLASALLPCSPDLA*CPHGGQ
Trigger: TTGGCCGCCATGGGGACATCAGGCAAGGTCTGGAGA...GCATGGCAGCAGTGCGGAGGCCAGGAAACCCTGATCGCCAGTTTCTAACGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR TCA 90 bp CATTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTCTGTGGTGGGCAGATTGCCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: HSVTQRGVLPPWFCQRLCGGQIA*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGCAATCTGCCCACC...ACAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR TCA 90 bp GGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCACTTCCCAGCTGGCGCAGGGAGTCTCAGCTaGGGACTCATGGGTGGACAT +
Preference number: 4 (lower is better)
Translates to: GPWLPRSWRRSCWHFPAGAGSLS*GLMGGH
Trigger: ATGTCCACCCATGAGTCCTCAGCTGAGACTCCCTGC...GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588572.6
CDS-3UTR GCA 90 bp AAGGTAGCTCAAGGACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAAGGGATGGTCCCGGGGTaGCGCTCGCTTCTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: KVAQGQEETVVAEGPLVEGMVPG*RSLLSP
Trigger: CGGACTCAGAAGCGAGCGGCACCCCGGGACCATCCC...TTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTCCTTGAGCTACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326529.9
CDS-3UTR GCA 90 bp ACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGGGCGGCCACTGGATCTaGTGTGGGATGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: TRGSARQKDAGSLHLQRKGGHWI*CGMVPG
Trigger: CCCCGGGACCATCCCACAGCAGATCCAGTGGCCGCC...CTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000589467.1
ENST00000593184.5
CDS-3UTR GCA 90 bp GTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACATTGGCGTCCCTCAGCTaGAGGGGACCCTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VRTALGTWALSVISPIQTLASLS*RGPWLP
Trigger: TGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAA...TGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp GGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGAGGCCTGTCCCATGCATTaGAGGATGTTGAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: GRGRSQSSRPYRQELAGEACPMH*RMLSGF
Trigger: GAAGCCGCTCAACATCCTGCAATGCATGGGACAGGC...CTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR GCA 90 bp GGGTGGATAACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGTCCTGGCCTCCGCACTaGTGCCATGCTGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GWITETRGSARQKDAGSLSWPPH*CHAELV
Trigger: CACCAGCTCAGCATGGCAGCAGTGCGGAGGCCAGGA...CAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTTATCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR GCA 90 bp CCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTGCCATCTCGGCTCACTaGAACCTCCACCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: PCRSMEGQDSLRDVGALSAISAH*NLHLLD
Trigger: ATCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATGGC...ACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588572.6
CDS-3UTR GCA 90 bp AGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCAGGCTCTGGGGACGTTaGATGAACAGGAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SMEGQDSLRDVGALSHLARLWGR*MNRKPS
Trigger: GGAGGGCTTCCTGTTCATGCAACGTCCCCAGAGCCT...GGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCGCGCTGGGGCCACTGGATCTGCTGTaGGATGGTCCCGGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: RETKRCRITASSEEAALGPLDLL*DGPGVP
Trigger: CGGCACCCCGGGACCATCCCACAGCAGATCCAGTGG...CCCCAGCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000589467.1
ENST00000593184.5
CDS-3UTR CCA 90 bp AGACACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGGATCTGGTTCTGGCTaGGGAAGCGCGGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: RHQAHSDRPFPVLVAAWRGSGSG*GSAGRR
Trigger: CCTTCGACCCGCGCTTCCCCAGCCAGAACCAGATCC...CCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp GGTCGAAGCCTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGTTACGGATCTGGTTCTaGCTGGGGAAGCGCGGGTCG +
Preference number: 4 (lower is better)
Translates to: GRSLGLRTPSYTWRPEQGLRIWF*LGKRGS
Trigger: CGACCCGCGCTTCCCCAGCCAGAACCAGATCCGTAA...CCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp ATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCCAGAGGAAGCCGCGCTaGGGCAGTCAGATTTTGCCG +
Preference number: 4 (lower is better)
Translates to: IPCPCRSMEGQDSLRDVGQRKPR*GSQILP
Trigger: CGGCAAAATCTGACTGCCCCAGCGCGGCTTCCTCTG...GCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGCAGAGGAAGCCGCGCTaGGGCAGTCAGATTTTGCCG +
Preference number: 4 (lower is better)
Translates to: QAHSDRPFPVLVAAWRVRQRKPR*GSQILP
Trigger: CGGCAAAATCTGACTGCCCCAGCGCGGCTTCCTCTG...CCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GGTCGAAGCCTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGCAGAGGAAGCCGCGCTaGGGCAGTCAGATTTTGCCG +
Preference number: 4 (lower is better)
Translates to: GRSLGLRTPSYTWRPEQGQRKPR*GSQILP
Trigger: CGGCAAAATCTGACTGCCCCAGCGCGGCTTCCTCTG...CCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp ATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGGTGGAGCAGGGGCCTaGGGTCATGAGTTCACCAAG +
Preference number: 4 (lower is better)
Translates to: IPCPCRSMEGQDSLRDVGGGAGA*GHEFTK
Trigger: CTTGGTGAACTCATGACCCCAGGCCCCTGCTCCACC...GCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp AGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGTGGAGGCGTTCATGCTaGCACTTCCCAGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RVRTALGTWALSVISPIQWRRSC*HFPAGR
Trigger: CCTGCCAGCTGGGAAGTGCCAGCATGAACGCCTCCA...CTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp AGGGGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCACTTCCCAGCTCATACAGACAGGAGCTaGCTGGGGAGGGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RGPWLPRSWRRSCWHFPAHTDRS*LGRAGV
Trigger: CACACCTGCCCTCCCCAGCCAGCTCCTGTCTGTATG...AGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp ACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTCGAAGGCTGGGCAGCACCGGGTGGTaGGGGAGGGGAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: TPSYTWRPEQGKQGTRRLGSTGW*GRGDTR
Trigger: CCTGGTGTCTCCCCTCCCCCACCACCCGGTGCTGCC...CAGCCTTCGAGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp ATAACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCTGGGCAGCACCGGGTaGTGGGGGAGGGGAGACACC +
Preference number: 4 (lower is better)
Translates to: ITETRGSARQKDAGSLHLLGSTG*WGRGDT
Trigger: GGTGTCTCCCCTCCCCCACCACCCGGTGCTGCCCAG...AAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp GGAGCATGCCTCTGCCCCAACCAAAAATGTCTCCAGACCTTGCCTGATGTCCCCGCTTCTGGCTTGAGCTaGGCAGCACCGGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GACLCPNQKCLQTLPDVPASGLS*AAPGGG
Trigger: CCCACCACCCGGTGCTGCCCAGCTCAAGCCAGAAGC...GGGGACATCAGGCAAGGTCTGGAGACATTTTTGGTTGGGGCAGAGGCATGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp CTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGAGGTGGCGTCATCCTaGGGGATGGCTCATCTAGGG +
Preference number: 4 (lower is better)
Translates to: LRDVGALSHLAHTDRSWLEVASS*GMAHLG
Trigger: CCCTAGATGAGCCATCCCCCAGGATGACGCCACCTC...CAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGAGGGCACCCTCACCCCATTCTTaGGTTGTGGTCAGAGACGGA +
Preference number: 4 (lower is better)
Translates to: VGALSHLAHTDRSWLGRAPSPHS*VVVRDG
Trigger: TCCGTCTCTGACCACAACCCAAGAATGGGGTGAGGG...TGCCCTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp TTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTCTGTGCCCCTCACCCCATTCTTaGGTTGTGGTCAGAGACGGA +
Preference number: 4 (lower is better)
Translates to: FCDSERGPAPVVLPAPLCPSPHS*VVVRDG
Trigger: TCCGTCTCTGACCACAACCCAAGAATGGGGTGAGGG...GCACAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp AATGGTGAGGGCGTTAGAAACTGGCGATCAGGGTTTCCTGGCCTCCGCACTGCTCTGGGGACCCTGGGCTaGCTCGTAGCTGTCAACGCG +
Preference number: 4 (lower is better)
Translates to: NGEGVRNWRSGFPGLRTALGTLG*LVAVNA
Trigger: CGCGTTGACAGCTACGAGCCAGCCCAGGGTCCCCAG...AGCAGTGCGGAGGCCAGGAAACCCTGATCGCCAGTTTCTAACGCCCTCACCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR CCA 90 bp GAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACATTCGTCAAGGCTCTaGGGACGTTGCATGAACAGG +
Preference number: 4 (lower is better)
Translates to: EGRCVCLASLSCRGPWLPHSSRL*GRCMNR
Trigger: CCTGTTCATGCAACGTCCCCAGAGCCTTGACGAATG...TGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
3UTR CAA 72 bp ACTCCTTGGCCTTGGAGCCATCTGGGTGGGACAGTGTaGAGAACTGGGGACCCTGGGCTGGCTCGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: TPWPWSHLGGTV*RTGDPGLARSC
Trigger: ACAGCTACGAGCCAGCCCAGGGTCCCCAGTTCTCAACACTGTCCCACCCAGATGGCTCCAAGGCCAAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR TCA 90 bp CATTATTCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGAGCTCTCCACCCAGCTaGTGGGGCACAGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: HYSWLRHWEVGVDNRDPGSSPPS*WGTASG
Trigger: ACCACTCGCTGTGCCCCATCAGCTGGGTGGAGAGCT...CCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp TGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCGAGAGGCAGAGGTTGCAGTaGGCTGAGATCGCATCATTG +
Preference number: 4 (lower is better)
Translates to: WLRHWEVGVDNRDPGLRERQRLQ*AEIASL
Trigger: CAATGATGCGATCTCAGCTCACTGCAACCTCTGCCT...CTCGCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR TCA 90 bp CTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGAAGCCCTCCTGTAGTTaGGTCCACACCCTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LRDVGALSHLAHTDRSWLKPSCS*VHTLCP
Trigger: AGGGCACAGGGTGTGGACTCAACTACAGGAGGGCTT...CAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp TCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCGCGCTGGACCAGCACCCCAGGCTaGCTGGTCTCACGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SARQKDAGSLHLQRKPRWTSTPG*LVSRLP
Trigger: AGGGAGCCGTGAGACCAGTCAGCCTGGGGTGCTGGT...CCAGCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR GCA 90 bp ACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCACTGCCAGCGCCTCTGTaGATTCGTCAAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TRPIVTDHSLSLSQHGGSLPAPL*IRQGSG
Trigger: CCCAGAGCCTTGACGAATGCACAGAGGCGCTGGCAG...TGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp GCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACACTGCCAGCGCCTCTGTaGATTCGTCAAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AHSDRPFPVLVAAWRVRTLPAPL*IRQGSG
Trigger: CCCAGAGCCTTGACGAATGCACAGAGGCGCTGGCAG...TGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp ACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGCTGCCCCCGTGGTTCTaGCAGCGCCTCTGTGCATTC +
Preference number: 4 (lower is better)
Translates to: TETRGSARQKDAGSLHLQLPPWF*QRLCAF
Trigger: GAATGCACAGAGGCGCTGGCAGAACCACGGGGGCAG...CTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp CCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCTGCCCCCGTGGTTCTaGCAGCGCCTCTGTGCATTC +
Preference number: 4 (lower is better)
Translates to: PGAPRDKKMQDHCIFRGSLPPWF*QRLCAF
Trigger: GAATGCACAGAGGCGCTGGCAGAACCACGGGGGCAG...GCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp TATTCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCTCGACCATTTCCCCTTaGGGGGCTCCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: YSWLRHWEVGVDNRDPGLSTISP*GAPGLP
Trigger: TGGAAGCCCAGGAGCCCCCCAAGGGGAAATGGTCGA...GAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACATTACGGATCTGGTTCTaGCTGGGGAAGCGCGGGTCG +
Preference number: 4 (lower is better)
Translates to: AHSDRPFPVLVAAWRVRTLRIWF*LGKRGS
Trigger: CGACCCGCGCTTCCCCAGCCAGAACCAGATCCGTAA...TGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp AGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGTCGTGGCTTAGACACTaGGAGGTAGGGGTGGATAAC +
Preference number: 4 (lower is better)
Translates to: RDVGALSHLAHTDRSWLGSWLRH*EVGVDN
Trigger: GTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGA...CCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp ACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGTGGCAGAGGGTCCTCTaGTCGAAGCCTGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TETRGSARQKDAGSLHLQWQRVL*SKPGPE
Trigger: CTCAGGCCCAGGCTTCGACCAGAGGACCCTCTGCCA...CTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGACAGGAAGAAACGGTaGTGGCAGAGGGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LRDVGALSHLAHTDRSWLDRKKR*WQRVLW
Trigger: CCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTC...CAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GGTCGAAGCCTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGGACAGGAAGAAACGGTaGTGGCAGAGGGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GRSLGLRTPSYTWRPEQGDRKKR*WQRVLW
Trigger: CCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTC...CCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GGAGCATGCCTCTGCCCCAACCAAAAATGTCTCCAGACCTTGCCTGATGTCCCCCTGGCACTTCCCAGCTaGCAGGACCTGGGGGACATC +
Preference number: 4 (lower is better)
Translates to: GACLCPNQKCLQTLPDVPLALPS*QDLGDI
Trigger: GATGTCCCCCAGGTCCTGCCAGCTGGGAAGTGCCAG...GGGGACATCAGGCAAGGTCTGGAGACATTTTTGGTTGGGGCAGAGGCATGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp GTAGCTCAAGGACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAAGCCTGGAGGCGTTCATGCTaGCACTTCCCAGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VAQGQEETVVAEGPLVEAWRRSC*HFPAGR
Trigger: CCTGCCAGCTGGGAAGTGCCAGCATGAACGCCTCCA...GGCTTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTCCTTGAGCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp TGGGGGAGGGGAGACACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGTGGCTTCCACGAAGTTaGAGGCGTTCATGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: WGRGDTRPIVTDHSLSLSWLPRS*RRSCWH
Trigger: GTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCA...CGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGTGTCTCCCCTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp GTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAAGCTGCAGGGGACCCTaGCTTCCACGAAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VRTALGTWALSVISPIQTSCRGP*LPRSWR
Trigger: CCTCCAACTTCGTGGAAGCCAGGGTCCCCTGCAGCT...TGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CATTATTCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGGCAGGTGTGTCTGCTTaGCGTCCCTCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HYSWLRHWEVGVDNRDPGAGVSA*RPSAAG
Trigger: CCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGC...CCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTaGGCGCTCTCAGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: QAHSDRPFPVLVAAWRVRTALGT*ALSVIS
Trigger: CGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGT...CCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp ATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCACAGCCTTAGGGACGTaGGCGCTCTCAGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: IPCPCRSMEGQDSLRDVGTALGT*ALSVIS
Trigger: CGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGT...GCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp AGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCGTCCTTGTCGCAGCATaGAGGGTCAGGACAGCCTTA +
Preference number: 4 (lower is better)
Translates to: SMEGQDSLRDVGALSHLAVLVAA*RVRTAL
Trigger: TAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGAC...GGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp TGGGGGAGGGGAGACACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCCCATTCTTGGGTTGTaGTCAGAGACGGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: WGRGDTRPIVTDHSLSLSPILGL*SETEPG
Trigger: TCCTGGCTCCGTCTCTGACCACAACCCAAGAATGGG...CGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGTGTCTCCCCTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR CCA 90 bp CAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGTCAGGGAGTACCCGTTaGGAAAACCAGCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: QAHSDRPFPVLVAAWRVRSGSTR*ENQHPR
Trigger: CCTGGGGTGCTGGTTTTCCCAACGGGTACTCCCTGA...CCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593184.5
3UTR CAA 72 bp CCTTGGGGAACCTCGGGCTCACACAGGTCAAGAAGCTaGTCTAGGGTCACCCTTGGAGCCATCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PWGTSGSHRSRS*SRVTLGAIWVG
Trigger: TCCCACCCAGATGGCTCCAAGGGTGACCCTAGACAAGCTTCTTGACCTGTGTGAGCCCGAGGTTCCCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR TCA 90 bp ACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGGAGGCAACTCCAGCCTaGCGTTGGCGGCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: TRGSARQKDAGSLHLQRKEATPA*RWRPLD
Trigger: ATCCAGTGGCCGCCAACGTCAGGCTGGAGTTGCCTC...CTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000593184.5
CDS-3UTR TCA 90 bp TGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCGAGCCGGCCTTTTGTTTCTaGAATTCAGGTGCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: WLRHWEVGVDNRDPGLREPAFCF*NSGAVA
Trigger: GGCAACAGCACCTGAATTTCAGAAACAAAAGGCCGG...CTCGCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588572.6
CDS-3UTR TCA 90 bp CTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCGAGACACTGATAATGGGGCCCTaGGCCATCTTGGTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LRHWEVGVDNRDPGLRETLIMGP*AILVCL
Trigger: AAGGCAAACCAAGATGGCTCAGGGCCCCATTATCAG...TGTCTCGCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR TCA 90 bp CTCAGAGGTGGCGTCATCCTGGGGGATGGCTCATCTAGGGTGTGTCCTCCTCTGTCTGGGGACGTTGCATaGACAGGAAGCCCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: LRGGVILGDGSSRVCPPLSGDVA*TGSPPV
Trigger: TACAGGAGGGCTTCCTGTTCATGCAACGTCCCCAGA...CAGAGGAGGACACACCCTAGATGAGCCATCCCCCAGGATGACGCCACCTCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR TCA 90 bp AGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGCTTAGCTCCATTCTGTaGCTCAGAGAGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RVRTALGTWALSVISPIQLSSIL*LREGSC
Trigger: GCAGGACCCCTCTCTGAGTCACAGAATGGAGCTAAG...CTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp TCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCAAGATGCAGGATCACTaGATCTTCAGAGGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: SWLRHWEVGVDNRDPGLRKMQDH*IFRGSR
Trigger: GCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTT...GCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp CCATTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTCTGAAGATGCAGGATCACTaGATCTTCAGAGGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: PFCDSERGPAPVVLPAPLKMQDH*IFRGSR
Trigger: GCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTT...CAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp GCGATCAGGGTTTCCTGGCCTCCGCACTGCTGCCATGCTGAGCTGGTGTTTCTAAGTTGGAGGCGTTCATaGTGGCACTTCCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AIRVSWPPHCCHAELVFLSWRRS*WHFPAG
Trigger: GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACT...TAGAAACACCAGCTCAGCATGGCAGCAGTGCGGAGGCCAGGAAACCCTGATCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR GCA 90 bp AAGCCTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACATTGGCGTCCCTCAGCTaGAGGGGACCCTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: KPGPENPIIHVETRARETLASLS*RGPWLP
Trigger: TGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAA...TGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp CATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTCGAAGGCTGGTGGCTGGAGGGCAGGTGTGTCTaGTTGGCGTCCCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HTRGDQSKGNKELEGWWLEGRCV*LASLSC
Trigger: GCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTC...CAGCCACCAGCCTTCGAGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp TATTCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCAGGCTCTGGGGACGTTaGATGAACAGGAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: YSWLRHWEVGVDNRDPGLRLWGR*MNRKPS
Trigger: GGAGGGCTTCCTGTTCATGCAACGTCCCCAGAGCCT...GAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CATTATTCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGGACGTTGGCGGCCACTaGATCTGCTGTGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: HYSWLRHWEVGVDNRDPGDVGGH*ICCGMV
Trigger: GACCATCCCACAGCAGATCCAGTGGCCGCCAACGTC...CCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000593184.5
CDS-3UTR CCA 90 bp GGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCGCGCGACGTTGGCGGCCACTaGATCTGCTGTGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: GSARQKDAGSLHLQRKPRDVGGH*ICCGMV
Trigger: GACCATCCCACAGCAGATCCAGTGGCCGCCAACGTC...GCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000593184.5
CDS-3UTR CCA 90 bp CATTATTCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGTCGACCATTTCCCCTTaGGGGGCTCCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: HYSWLRHWEVGVDNRDPGSTISP*GAPGLP
Trigger: TGGAAGCCCAGGAGCCCCCCAAGGGGAAATGGTCGA...CCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp AATGGTGAGGGCGTTAGAAACTGGCGATCAGGGTTTCCTGGCCTCCGCACTGCTCAGAGGAAGCCGCGCTaGGGCAGTCAGATTTTGCCG +
Preference number: 4 (lower is better)
Translates to: NGEGVRNWRSGFPGLRTAQRKPR*GSQILP
Trigger: CGGCAAAATCTGACTGCCCCAGCGCGGCTTCCTCTG...AGCAGTGCGGAGGCCAGGAAACCCTGATCGCCAGTTTCTAACGCCCTCACCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp CCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCAGAGGAAGCCGCGCTaGGGCAGTCAGATTTTGCCG +
Preference number: 4 (lower is better)
Translates to: PGAPRDKKMQDHCIFRGSQRKPR*GSQILP
Trigger: CGGCAAAATCTGACTGCCCCAGCGCGGCTTCCTCTG...GCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp TGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCGAGACCCCATCATACACGTaGAGACCAGAGCAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: WLRHWEVGVDNRDPGLRETPSYT*RPEQGK
Trigger: TTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGT...CTCGCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp TATTCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCAGGAAGAAACGGTGGTaGCAGAGGGTCCTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: YSWLRHWEVGVDNRDPGLRKKRW*QRVLWS
Trigger: CGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCT...GAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp TATTCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCGACAGGAAGAAACGGTaGTGGCAGAGGGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: YSWLRHWEVGVDNRDPGLDRKKR*WQRVLW
Trigger: CCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTC...GAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp ACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGGGTGGAGCAGGGGCCTaGGGTCATGAGTTCACCAAG +
Preference number: 4 (lower is better)
Translates to: TETRGSARQKDAGSLHLQGGAGA*GHEFTK
Trigger: CTTGGTGAACTCATGACCCCAGGCCCCTGCTCCACC...CTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTCGAAGGCTGGCTGGCACTTCCCAGCTaGCAGGACCTGGGGGACATC +
Preference number: 4 (lower is better)
Translates to: PHHTRGDQSKGNKELEGWLALPS*QDLGDI
Trigger: GATGTCCCCCAGGTCCTGCCAGCTGGGAAGTGCCAG...CCAGCCTTCGAGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp AGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGTGGCTTCCACGAAGTTaGAGGCGTTCATGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RVRTALGTWALSVISPIQWLPRS*RRSCWH
Trigger: GTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCA...CTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAGCTGCAGGGGACCCTaGCTTCCACGAAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: ETRGSARQKDAGSLHLQRSCRGP*LPRSWR
Trigger: CCTCCAACTTCGTGGAAGCCAGGGTCCCCTGCAGCT...CCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp ACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGTTGAGCGGCTTCTCTaGTCTCCACCCACTCGATGC +
Preference number: 4 (lower is better)
Translates to: TRPIVTDHSLSLSQHGGSVERLL*SPPTRC
Trigger: GCATCGAGTGGGTGGAGACCAGAGAAGCCGCTCAAC...TGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp CGCCTCTGTGCATTCGTCAAGGCTCTGGGGACGTTGCATGAACAGGAAGCCCTCCCAAGATCTCAGAGGTaGCGTCATCCTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: RLCAFVKALGTLHEQEALPRSQR*RHPGGW
Trigger: CCATCCCCCAGGATGACGCCACCTCTGAGATCTTGG...GAGGGCTTCCTGTTCATGCAACGTCCCCAGAGCCTTGACGAATGCACAGAGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGAACTCGAAGGCTGGTaGCTGGGTGACCTCACCAAC +
Preference number: 4 (lower is better)
Translates to: AHSDRPFPVLVAAWRVRTELEGW*LGDLTN
Trigger: GTTGGTGAGGTCACCCAGCCACCAGCCTTCGAGTTC...TGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR TCA 90 bp ATAACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTAGCTCTCCACCCAGCTaGTGGGGCACAGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: ITETRGSARQKDAGSLHLSSPPS*WGTASG
Trigger: ACCACTCGCTGTGCCCCATCAGCTGGGTGGAGAGCT...AAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp TGGGGGAGGGGAGACACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCGAAAATCCCGTTCTTaGTCTGCTCGTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: WGRGDTRPIVTDHSLSLSRKSRS*SARSSS
Trigger: AGAGCTGGAACGAGCAGATCAAGAACGGGATTTTCG...CGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGTGTCTCCCCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR TCA 90 bp CTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCGAGACACGAAAATCCCGTTCTTaGTCTGCTCGTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LRHWEVGVDNRDPGLRETRKSRS*SARSSS
Trigger: AGAGCTGGAACGAGCAGATCAAGAACGGGATTTTCG...TGTCTCGCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp GAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGGTCGAAGCCTGGGCCTaGGAACCCCATCATACACGT +
Preference number: 4 (lower is better)
Translates to: ETRGSARQKDAGSLHLQRVEAWA*EPHHTR
Trigger: ACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGAC...CCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp ACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGGTCGAAGCCTGGGCCTaGGAACCCCATCATACACGT +
Preference number: 4 (lower is better)
Translates to: TETRGSARQKDAGSLHLQVEAWA*EPHHTR
Trigger: ACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGAC...CTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp GTCTCACGGCTCCCTCAGCAGGACCAGGCTGGAACCCTAGGGCTTTGTCAAGCGGAGGTTGCAGTGAGCTaGGATCGCATCATTGTACTC +
Preference number: 4 (lower is better)
Translates to: VSRLPQQDQAGTLGLCQAEVAVS*DRIIVL
Trigger: GAGTACAATGATGCGATCTCAGCTCACTGCAACCTC...CGCTTGACAAAGCCCTAGGGTTCCAGCCTGGTCCTGCTGAGGGAGCCGTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR TCA 90 bp AGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGAGGCAGAGGTTGCAGTaGGCTGAGATCGCATCATTG +
Preference number: 4 (lower is better)
Translates to: RVRTALGTWALSVISPIQRQRLQ*AEIASL
Trigger: CAATGATGCGATCTCAGCTCACTGCAACCTCTGCCT...CTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR TCA 90 bp CGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCGCGCTGGGGAAGCCCTCCTGTAGTTaGGTCCACACCCTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RETKRCRITASSEEAALGKPSCS*VHTLCP
Trigger: AGGGCACAGGGTGTGGACTCAACTACAGGAGGGCTT...CCCCAGCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp TGGGGGAGGGGAGACACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGAAGATGCAGGATCACTaGATCTTCAGAGGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: WGRGDTRPIVTDHSLSLSKMQDH*IFRGSR
Trigger: GCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTT...CGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGTGTCTCCCCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR GCA 90 bp GAGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGCGAGACAAAAAGATaGAGGATCACTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: EGRCVCLASLSCRGPWLPRETKR*RITASS
Trigger: TGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCG...TGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp TGGTTCTGCCAGCGCCTCTGTGCATTCGTCAAGGCTCTGGGGACGTTGCATGAAAGTTGGAGGCGTTCATaGTGGCACTTCCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: WFCQRLCAFVKALGTLHESWRRS*WHFPAG
Trigger: GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACT...TTCATGCAACGTCCCCAGAGCCTTGACGAATGCACAGAGGCGCTGGCAGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp CCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGTCGATGCCAGGAGCATaGCTCTGCCCCAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: PFPVLVAAWRVRTALGTWSMPGA*LCPNQK
Trigger: TTTTTGGTTGGGGCAGAGGCATGCTCCTGGCATCGA...CCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR GCA 90 bp AGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGTCGATGCCAGGAGCATaGCTCTGCCCCAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: RVRTALGTWALSVISPIQSMPGA*LCPNQK
Trigger: TTTTTGGTTGGGGCAGAGGCATGCTCCTGGCATCGA...CTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp CATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTCGAAGGCTGGTGGCTGTCGACCATTTCCCCTTaGGGGGCTCCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: HTRGDQSKGNKELEGWWLSTISP*GAPGLP
Trigger: TGGAAGCCCAGGAGCCCCCCAAGGGGAAATGGTCGA...CAGCCACCAGCCTTCGAGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp ATAACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTGGATCTGGTTCTGGCTaGGGAAGCGCGGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: ITETRGSARQKDAGSLHLGSGSG*GSAGRR
Trigger: CCTTCGACCCGCGCTTCCCCAGCCAGAACCAGATCC...AAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTGGATCTGGTTCTGGCTaGGGAAGCGCGGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: GLRTPSYTWRPEQGKQGTGSGSG*GSAGRR
Trigger: CCTTCGACCCGCGCTTCCCCAGCCAGAACCAGATCC...AGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp TCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCGCGCTGGTTACGGATCTGGTTCTaGCTGGGGAAGCGCGGGTCG +
Preference number: 4 (lower is better)
Translates to: SARQKDAGSLHLQRKPRWLRIWF*LGKRGS
Trigger: CGACCCGCGCTTCCCCAGCCAGAACCAGATCCGTAA...CCAGCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CTCAGAGGTGGCGTCATCCTGGGGGATGGCTCATCTAGGGTGTGTCCTCCTCTGTCGTGGCTTAGACACTaGGAGGTAGGGGTGGATAAC +
Preference number: 4 (lower is better)
Translates to: LRGGVILGDGSSRVCPPLSWLRH*EVGVDN
Trigger: GTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGA...CAGAGGAGGACACACCCTAGATGAGCCATCCCCCAGGATGACGCCACCTCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR CCA 90 bp GGTCGAAGCCTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGTCGTGGCTTAGACACTaGGAGGTAGGGGTGGATAAC +
Preference number: 4 (lower is better)
Translates to: GRSLGLRTPSYTWRPEQGSWLRH*EVGVDN
Trigger: GTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGA...CCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCACTTCCCAGCTGGCACCCCATCATACACGTaGAGACCAGAGCAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: GPWLPRSWRRSCWHFPAGTPSYT*RPEQGK
Trigger: TTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGT...GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTTGGCAGAGGGTCCTCTaGTCGAAGCCTGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GLRTPSYTWRPEQGKQGTWQRVL*SKPGPE
Trigger: CTCAGGCCCAGGCTTCGACCAGAGGACCCTCTGCCA...AGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCAGGAAGAAACGGTGGTaGCAGAGGGTCCTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: PGAPRDKKMQDHCIFRGSRKKRW*QRVLWS
Trigger: CGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCT...GCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp TCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCGCGCTGGAGCTGCAGGGGACCCTaGCTTCCACGAAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SARQKDAGSLHLQRKPRWSCRGP*LPRSWR
Trigger: CCTCCAACTTCGTGGAAGCCAGGGTCCCCTGCAGCT...CCAGCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGTCCTTGTCGCAGCATaGAGGGTCAGGACAGCCTTA +
Preference number: 4 (lower is better)
Translates to: AHSDRPFPVLVAAWRVRTVLVAA*RVRTAL
Trigger: TAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGAC...TGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GGGTGGATAACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGGTCCTTGTCGCAGCATaGAGGGTCAGGACAGCCTTA +
Preference number: 4 (lower is better)
Translates to: GWITETRGSARQKDAGSLVLVAA*RVRTAL
Trigger: TAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGAC...CAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTTATCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp ACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGAGGGCGTTAGAAACTaGCGATCAGGGTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: TRPIVTDHSLSLSQHGGSEGVRN*RSGFPG
Trigger: GCCAGGAAACCCTGATCGCCAGTTTCTAACGCCCTC...TGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp GGGTGGATAACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGTTTGGGAGGCTGAGGTaGGCAGATTGCCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GWITETRGSARQKDAGSLFGRLR*ADCLRS
Trigger: TGACCTCAGGCAATCTGCCCACCTCAGCCTCCCAAA...CAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTTATCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp GAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGGGCCCTGAGCCATCTTaGTTTGCCTTGGGGAACCTC +
Preference number: 4 (lower is better)
Translates to: ETRGSARQKDAGSLHLQRGPEPS*FALGNL
Trigger: GAGGTTCCCCAAGGCAAACCAAGATGGCTCAGGGCC...CCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR CCA 90 bp TGGTTCTGCCAGCGCCTCTGTGCATTCGTCAAGGCTCTGGGGACGTTGCATGAAGCCAGCCAGAGCACCTaGAGGAGGTGTTCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: WFCQRLCAFVKALGTLHEASQST*RRCSEF
Trigger: AAACTCCGAACACCTCCTCCAGGTGCTCTGGCTGGC...TTCATGCAACGTCCCCAGAGCCTTGACGAATGCACAGAGGCGCTGGCAGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR CCA 90 bp ACCAAGGTAGCTCAAGGACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCTCGAAGGCTGGTGGCTaGGAGGTTGCTGAGACTGTG +
Preference number: 4 (lower is better)
Translates to: TKVAQGQEETVVAEGPLVSKAGG*EVAETV
Trigger: CACAGTCTCAGCAACCTCCCAGCCACCAGCCTTCGA...GACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTCCTTGAGCTACCTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590900.5
3UTR CAA 72 bp GTAGTTGAGTCCACACCCTGTGCCCTCACCCCATTCTaGGGTTGTGGTCAGAGACGGAGCCAGGAGACCAAG +
Preference number: 4 (lower is better)
Translates to: VVESTPCALTPF*GCGQRRSQETK
Trigger: CTTGGTCTCCTGGCTCCGTCTCTGACCACAACCCAAGAATGGGGTGAGGGCACAGGGTGTGGACTCAACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp AAGGTAGCTCAAGGACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAAGTCGAAGCCTGGGCCTaGGAACCCCATCATACACGT +
Preference number: 4 (lower is better)
Translates to: KVAQGQEETVVAEGPLVEVEAWA*EPHHTR
Trigger: ACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGAC...TTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTCCTTGAGCTACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp ATAACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTTCTCCAGACCTTGCCTaGTGTCCCCATGGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: ITETRGSARQKDAGSLHLSPDLA*CPHGGQ
Trigger: TTGGCCGCCATGGGGACATCAGGCAAGGTCTGGAGA...AAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR TCA 90 bp GGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTTCTCCAGACCTTGCCTaGTGTCCCCATGGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: GLRTPSYTWRPEQGKQGTSPDLA*CPHGGQ
Trigger: TTGGCCGCCATGGGGACATCAGGCAAGGTCTGGAGA...AGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR TCA 90 bp CCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGAGGTTGCAGTGAGCTaGGATCGCATCATTGTACTC +
Preference number: 4 (lower is better)
Translates to: PFPVLVAAWRVRTALGTWEVAVS*DRIIVL
Trigger: GAGTACAATGATGCGATCTCAGCTCACTGCAACCTC...CCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR TCA 90 bp CAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGGAGGTTGCAGTGAGCTaGGATCGCATCATTGTACTC +
Preference number: 4 (lower is better)
Translates to: QAHSDRPFPVLVAAWRVREVAVS*DRIIVL
Trigger: GAGTACAATGATGCGATCTCAGCTCACTGCAACCTC...CCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR TCA 90 bp AACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGGTGGGCAGATTGCCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: NRDPGLRETKRCRITASSGGQIA*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGCAATCTGCCCACC...TGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR TCA 90 bp AAGCCTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACATGGCTGGGAGGTTGCTaGGACTGTGAGGCTGGCATT +
Preference number: 4 (lower is better)
Translates to: KPGPENPIIHVETRARETWLGGC*DCEAGI
Trigger: AATGCCAGCCTCACAGTCTCAGCAACCTCCCAGCCA...TGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR GCA 90 bp CAAGGTAGCTCAAGGACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAGCCTGTCCCATGCATTaGAGGATGTTGAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: QGSSRTGRNGGGRGSSGRACPMH*RMLSGF
Trigger: GAAGCCGCTCAACATCCTGCAATGCATGGGACAGGC...TCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTCCTTGAGCTACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR GCA 90 bp CAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGTTGAAGCAATTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QAHSDRPFPVLVAAWRVRLKQFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTCAA...CCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588572.6
CDS-3UTR CCA 90 bp ATAACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTTCGACCATTTCCCCTTaGGGGGCTCCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ITETRGSARQKDAGSLHLSTISP*GAPGLP
Trigger: TGGAAGCCCAGGAGCCCCCCAAGGGGAAATGGTCGA...AAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GCGATCAGGGTTTCCTGGCCTCCGCACTGCTGCCATGCTGAGCTGGTGTTTCTATCGTGGCTTAGACACTaGGAGGTAGGGGTGGATAAC +
Preference number: 4 (lower is better)
Translates to: AIRVSWPPHCCHAELVFLSWLRH*EVGVDN
Trigger: GTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGA...TAGAAACACCAGCTCAGCATGGCAGCAGTGCGGAGGCCAGGAAACCCTGATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp CAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACCCCATCATACACGTaGAGACCAGAGCAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: QAHSDRPFPVLVAAWRVRTPSYT*RPEQGK
Trigger: TTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGT...CCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp AAGCCTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAAGAAACGGTGGTaGCAGAGGGTCCTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: KPGPENPIIHVETRARETRKKRW*QRVLWS
Trigger: CGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCT...TGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp ACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTCGAAGGCTGGGTGGAGCAGGGGCCTaGGGTCATGAGTTCACCAAG +
Preference number: 4 (lower is better)
Translates to: TPSYTWRPEQGKQGTRRLGGAGA*GHEFTK
Trigger: CTTGGTGAACTCATGACCCCAGGCCCCTGCTCCACC...CAGCCTTCGAGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCGCGCTGGGGTGGCTTCCACGAAGTTaGAGGCGTTCATGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RETKRCRITASSEEAALGWLPRS*RRSCWH
Trigger: GTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCA...CCCCAGCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAGTTGAGCGGCTTCTCTaGTCTCCACCCACTCGATGC +
Preference number: 4 (lower is better)
Translates to: LGLRTPSYTWRPEQGKQGVERLL*SPPTRC
Trigger: GCATCGAGTGGGTGGAGACCAGAGAAGCCGCTCAAC...TCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp GGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCACTTCCCAGCTGGCTGGCTGCATTATTCGTaGCTTAGACACTGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: GPWLPRSWRRSCWHFPAGWLHYS*LRHWEV
Trigger: TACCTCCCAGTGTCTAAGCCACGAATAATGCAGCCA...GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588572.6
CDS-3UTR CCA 90 bp CTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGACCAAGATCTCAGAGGTaGCGTCATCCTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: LGLRTPSYTWRPEQGKQGPRSQR*RHPGGW
Trigger: CCATCCCCCAGGATGACGCCACCTCTGAGATCTTGG...TCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp GCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGAATACCTGCATTATTCGTaGCTTAGACACTGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: AGVSAWRPSAAGDPGFHEYLHYS*LRHWEV
Trigger: TACCTCCCAGTGTCTAAGCCACGAATAATGCAGGTA...TTCGTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR TCA 90 bp GGAGCATGCCTCTGCCCCAACCAAAAATGTCTCCAGACCTTGCCTGATGTCCCCAGGCAGAGGTTGCAGTaGGCTGAGATCGCATCATTG +
Preference number: 4 (lower is better)
Translates to: GACLCPNQKCLQTLPDVPRQRLQ*AEIASL
Trigger: CAATGATGCGATCTCAGCTCACTGCAACCTCTGCCT...GGGGACATCAGGCAAGGTCTGGAGACATTTTTGGTTGGGGCAGAGGCATGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR GCA 90 bp GGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTAGTTGGAGGCGTTCATaGTGGCACTTCCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GLRTPSYTWRPEQGKQGTSWRRS*WHFPAG
Trigger: GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACT...AGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp AAGCCTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAGCCTGTCCCATGCATTaGAGGATGTTGAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: KPGPENPIIHVETRARETACPMH*RMLSGF
Trigger: GAAGCCGCTCAACATCCTGCAATGCATGGGACAGGC...TGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp CAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGTGGTGGCATTATTCGTaGCTTAGACACTGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: QAHSDRPFPVLVAAWRVRWWHYS*LRHWEV
Trigger: TACCTCCCAGTGTCTAAGCCACGAATAATGCCACCA...CCTGACCCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326529.9
CDS-3UTR CCA 90 bp TTCAGAGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTCTCCTCTGCCCTGGCAGAGGGTCCTCTaGTCGAAGCCTGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FRAFITFSQVSVSASPLPWQRVL*SKPGPE
Trigger: CTCAGGCCCAGGCTTCGACCAGAGGACCCTCTGCCA...GGGCAGAGGAGAGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp CATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTCGAAGGCTGGTGGCTGGAGGGCGTTAGAAACTaGCGATCAGGGTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: HTRGDQSKGNKELEGWWLEGVRN*RSGFPG
Trigger: GCCAGGAAACCCTGATCGCCAGTTTCTAACGCCCTC...CAGCCACCAGCCTTCGAGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp AAGCCTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAGAGGGCGTTAGAAACTaGCGATCAGGGTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: KPGPENPIIHVETRARETEGVRN*RSGFPG
Trigger: GCCAGGAAACCCTGATCGCCAGTTTCTAACGCCCTC...TGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp CATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTCGAAGGCTGGTGGCTGTTTGGGAGGCTGAGGTaGGCAGATTGCCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HTRGDQSKGNKELEGWWLFGRLR*ADCLRS
Trigger: TGACCTCAGGCAATCTGCCCACCTCAGCCTCCCAAA...CAGCCACCAGCCTTCGAGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp GGGTGGATAACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGAAGGAACTCGAAGGCTaGTGGCTGCATTATTCGTGG +
Preference number: 4 (lower is better)
Translates to: GWITETRGSARQKDAGSLKELEG*WLHYSW
Trigger: CCACGAATAATGCAGCCACCAGCCTTCGAGTTCCTT...CAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTTATCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588572.6
CDS-3UTR CCA 90 bp CTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCGCGCTGCCCATTCTTGGGTTGTaGTCAGAGACGGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LRETKRCRITASSEEAALPILGL*SETEPG
Trigger: TCCTGGCTCCGTCTCTGACCACAACCCAAGAATGGG...CAGCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CATTATTCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCATTCGTCAAGGCTCTaGGGACGTTGCATGAACAGG +
Preference number: 4 (lower is better)
Translates to: HYSWLRHWEVGVDNRDPGHSSRL*GRCMNR
Trigger: CCTGTTCATGCAACGTCCCCAGAGCCTTGACGAATG...CCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp TCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCATCTACCATTATTCGTaGCTTAGACACTGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: SWLRHWEVGVDNRDPGLRIYHYS*LRHWEV
Trigger: TACCTCCCAGTGTCTAAGCCACGAATAATGGTAGAT...GCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593184.5
3UTR CAA 72 bp GCTCACACAGGTCAAGAAGCTTGTCTAGGGTCACCCTaGGAGCCATCTGGGTGGGACAGTGTTGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: AHTGQEACLGSP*EPSGWDSVENW
Trigger: CCAGTTCTCAACACTGTCCCACCCAGATGGCTCCAAGGGTGACCCTAGACAAGCTTCTTGACCTGTGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR TCA 90 bp CATTATTCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCGAAAATCCCGTTCTTaGTCTGCTCGTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HYSWLRHWEVGVDNRDPGRKSRS*SARSSS
Trigger: AGAGCTGGAACGAGCAGATCAAGAACGGGATTTTCG...CCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp ACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGCGAAAATCCCGTTCTTaGTCTGCTCGTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TETRGSARQKDAGSLHLQRKSRS*SARSSS
Trigger: AGAGCTGGAACGAGCAGATCAAGAACGGGATTTTCG...CTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp GGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCGCGCAAGATGCAGGATCACTaGATCTTCAGAGGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: GSARQKDAGSLHLQRKPRKMQDH*IFRGSR
Trigger: GCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTT...GCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp AGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTCGAAGGAGTTGGAGGCGTTCATaGTGGCACTTCCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RTPSYTWRPEQGKQGTRRSWRRS*WHFPAG
Trigger: GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACT...CCTTCGAGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp TTCAGAGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTCTCCTCTGCCCTTACGGATCTGGTTCTaGCTGGGGAAGCGCGGGTCG +
Preference number: 4 (lower is better)
Translates to: FRAFITFSQVSVSASPLPLRIWF*LGKRGS
Trigger: CGACCCGCGCTTCCCCAGCCAGAACCAGATCCGTAA...GGGCAGAGGAGAGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CCA 90 bp AGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGCTCATGGGTGGACATTaGAATTTCCAGGAACCTTCT +
Preference number: 4 (lower is better)
Translates to: RVRTALGTWALSVISPIQLMGGH*NFQEPS
Trigger: AGAAGGTTCCTGGAAATTCCAATGTCCACCCATGAG...CTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588572.6
CDS-3UTR TCA 90 bp AAGGTAGCTCAAGGACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAACGAAAATCCCGTTCTTaGTCTGCTCGTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KVAQGQEETVVAEGPLVERKSRS*SARSSS
Trigger: AGAGCTGGAACGAGCAGATCAAGAACGGGATTTTCG...TTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTCCTTGAGCTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp ATAACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTTCGATGCCAGGAGCATaGCTCTGCCCCAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: ITETRGSARQKDAGSLHLSMPGA*LCPNQK
Trigger: TTTTTGGTTGGGGCAGAGGCATGCTCCTGGCATCGA...AAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR GCA 90 bp CCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTCGAAGGCTGGTCGAAGGCTGGTGGCTaGATTATTCGTGGCTTAGAC +
Preference number: 4 (lower is better)
Translates to: PHHTRGDQSKGNKELEGWSKAGG*IIRGLD
Trigger: GTCTAAGCCACGAATAATGCAGCCACCAGCCTTCGA...CCAGCCTTCGAGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588572.6
CDS-3UTR CCA 90 bp TACCATTATTCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGTCGTGGCTTAGACACTaGGAGGTAGGGGTGGATAAC +
Preference number: 4 (lower is better)
Translates to: YHYSWLRHWEVGVDNRDPSWLRH*EVGVDN
Trigger: GTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGA...CGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589467.1
ENST00000593184.5
CDS-3UTR CCA 90 bp CTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACCCCATCATACACGTaGAGACCAGAGCAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LGLRTPSYTWRPEQGKQGTPSYT*RPEQGK
Trigger: TTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGT...TCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR TCA 90 bp TTTATAGGGGGTTCAGAGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTGAGGCAACTCCAGCCTaGCGTTGGCGGCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: FIGGSERSSHSHKFLYPPEATPA*RWRPLD
Trigger: ATCCAGTGGCCGCCAACGTCAGGCTGGAGTTGCCTC...AGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCTCTGAACCCCCTATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR GCA 90 bp AGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTCTCCTCTGCCCCCACCAAGATGCAGGATCACTaGATCTTCAGAGGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: SVHHILTSFCIRLSSAPTKMQDH*IFRGSR
Trigger: GCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTT...GGTGGGGGCAGAGGAGAGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR GCA 90 bp ACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGCGCGAGACAAAAAGATaGAGGATCACTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: TETRGSARQKDAGSLHLQRETKR*RITASS
Trigger: TGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCG...CTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp GAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGCGCGAGACAAAAAGATaGAGGATCACTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: ETRGSARQKDAGSLHLQRRETKR*RITASS
Trigger: TGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCG...CCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CCA 90 bp CCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCGCATACCATTATTCGTaGCTTAGACACTGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: PGAPRDKKMQDHCIFRGSAYHYS*LRHWEV
Trigger: TACCTCCCAGTGTCTAAGCCACGAATAATGGTATGC...GCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589467.1
CDS-3UTR CCA 90 bp ATAACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTAAGGAACTCGAAGGCTaGTGGCATTATTCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: ITETRGSARQKDAGSLHLKELEG*WHYSWL
Trigger: AAGCCACGAATAATGCCACCAGCCTTCGAGTTCCTT...AAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326529.9
CDS-3UTR TCA 90 bp TTTATAGGGGGTTCAGAGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTGTCGAAGCCTGGGCCTaGGAACCCCATCATACACGT +
Preference number: 4 (lower is better)
Translates to: FIGGSERSSHSHKFLYPPVEAWA*EPHHTR
Trigger: ACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGAC...AGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCTCTGAACCCCCTATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR GCA 90 bp ATAACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCGCGAGACAAAAAGATaGAGGATCACTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: ITETRGSARQKDAGSLHLRETKR*RITASS
Trigger: TGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCG...AAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR GCA 90 bp TACCATTATTCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGCGCGAGACAAAAAGATaGAGGATCACTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: YHYSWLRHWEVGVDNRDPRETKR*RITASS
Trigger: TGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCG...CGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589467.1
ENST00000593184.5
CDS-3UTR CCA 90 bp TTTATAGGGGGTTCAGAGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTACAGCCTTAGGGACGTaGGCGCTCTCAGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: FIGGSERSSHSHKFLYPPTALGT*ALSVIS
Trigger: CGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGT...AGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCTCTGAACCCCCTATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR TCA 90 bp TTTATAGGGGGTTCAGAGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTCTTAGCTCCATTCTGTaGCTCAGAGAGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: FIGGSERSSHSHKFLYPPLSSIL*LREGSC
Trigger: GCAGGACCCCTCTCTGAGTCACAGAATGGAGCTAAG...AGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCTCTGAACCCCCTATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR TCA 90 bp TTTATAGGGGGTTCAGAGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTTTTGAACCCTGGGGTTaGACAGGGCCTCATAGGACC +
Preference number: 4 (lower is better)
Translates to: FIGGSERSSHSHKFLYPPFEPWG*TGPHRT
Trigger: GGTCCTATGAGGCCCTGTTCAACCCCAGGGTTCAAA...AGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCTCTGAACCCCCTATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR TCA 90 bp TTTATAGGGGGTTCAGAGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTCTAGGGTGTGTCCTTTaGACCCTGGGGTTGAACAGG +
Preference number: 4 (lower is better)
Translates to: FIGGSERSSHSHKFLYPPLGCVL*TLGLNR
Trigger: CCTGTTCAACCCCAGGGTTCAAAGGACACACCCTAG...AGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCTCTGAACCCCCTATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR CCA 90 bp TTTATAGGGGGTTCAGAGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTTGGCTTCCACGAAGTTaGAGGCGTTCATGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: FIGGSERSSHSHKFLYPPWLPRS*RRSCWH
Trigger: GTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCA...AGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCTCTGAACCCCCTATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS GCA 90 bp GCACAGGTGATGGTCCACCAGGCTGGAGGCCAGGCCGGGCAGGTCTaGCCCTGCCCCTGGCTCAGGCATCAGTGGGGCAGTGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: AQVMVHQAGGQAGQV*PCPWLRHQWGSGGC
Trigger: GCAGCCGCCACTGCCCCACTGATGCCTGAGCCAGGGGCAGGGGCAGACCTGCCCGGCCTGGCCTCCAGCCTGGTGGACCATCACCTGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589879.1
CDS-3UTR CAA 90 bp AGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGGCAGGTGTGTCTGCTaGGCGTCCCTCAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RAGVSAWRPSAAGDPGFHGRCVC*ASLSCR
Trigger: CCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCC...GTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp AGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACAACTCCAGCCTGACGTaGGCGGCCACTGGATCTGCT +
Preference number: 5 (lower is better)
Translates to: RAGVSAWRPSAAGDPGFHNSSLT*AATGSA
Trigger: AGCAGATCCAGTGGCCGCCAACGTCAGGCTGGAGTT...GTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp CGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGAGGGCGCCCTCACCCCATTCTaGGGTTGTGGTCAGAGACGG +
Preference number: 5 (lower is better)
Translates to: RGRSQSSRPYRQELAGEGALTPF*GCGQRR
Trigger: CCGTCTCTGACCACAACCCAAGAATGGGGTGAGGGC...GCCCTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp TCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCCTGGGTGGGACAGTGTaGAGAACTGGGGACCCTGGG +
Preference number: 5 (lower is better)
Translates to: SWLRHWEVGVDNRDPGLRLGGTV*RTGDPG
Trigger: CCCAGGGTCCCCAGTTCTCAACACTGTCCCACCCAG...GCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp TGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCGAGAACTCCAGCCTGACGTaGGCGGCCACTGGATCTGCT +
Preference number: 5 (lower is better)
Translates to: WLRHWEVGVDNRDPGLRENSSLT*AATGSA
Trigger: AGCAGATCCAGTGGCCGCCAACGTCAGGCTGGAGTT...CTCGCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000593184.5
CDS-3UTR CAA 90 bp AGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGGCCTGTCCCATGCATaGCAGGATGTTGAGCGGCTT +
Preference number: 5 (lower is better)
Translates to: RAGVSAWRPSAAGDPGFHGLSHA*QDVERL
Trigger: AAGCCGCTCAACATCCTGCAATGCATGGGACAGGCC...GTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp AGGGCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACCACCCCATTCTTGGGTaGTGGTCAGAGACGGAGCCA +
Preference number: 5 (lower is better)
Translates to: RAGVSAWRPSAAGDPGFHHPILG*WSETEP
Trigger: TGGCTCCGTCTCTGACCACAACCCAAGAATGGGGTG...GTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp CCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTAAGTCAGCTTCTGGCTaGAGCTGGGCAGCACCGGGT +
Preference number: 5 (lower is better)
Translates to: PCRSMEGQDSLRDVGALSKSASG*SWAAPG
Trigger: ACCCGGTGCTGCCCAGCTCAAGCCAGAAGCTGACTT...ACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp AGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCGCCCTCACCCCATTCTaGGGTTGTGGTCAGAGACGG +
Preference number: 5 (lower is better)
Translates to: SMEGQDSLRDVGALSHLAALTPF*GCGQRR
Trigger: CCGTCTCTGACCACAACCCAAGAATGGGGTGAGGGC...GGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp GGTCGAAGCCTGGGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGCTGGGTGGGACAGTGTaGAGAACTGGGGACCCTGGG +
Preference number: 5 (lower is better)
Translates to: GRSLGLRTPSYTWRPEQGLGGTV*RTGDPG
Trigger: CCCAGGGTCCCCAGTTCTCAACACTGTCCCACCCAG...CCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCCCAGGCTTCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp CCATTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTCTGTGGAACCCTAGGGCTTaGTCAAGCGGCACTCCTTGG +
Preference number: 5 (lower is better)
Translates to: PFCDSERGPAPVVLPAPLWNPRA*SSGTPW
Trigger: CCAAGGAGTGCCGCTTGACAAAGCCCTAGGGTTCCA...CAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS CCA 90 bp GCCCCTCCCTGCCGTCCCTTGTCACACCCTGCTCCTCCCATAACCTaGCTGAGCAGGTCTCACCCAGGAAGTTCTGGTAGCAGTTACGGA +
Preference number: 5 (lower is better)
Translates to: APPCRPLSHPAPPIT*LSRSHPGSSGSSYG
Trigger: TCCGTAACTGCTACCAGAACTTCCTGGGTGAGACCTGCTCAGCCAGGTTATGGGAGGAGCAGGGTGTGACAAGGGACGGCAGGGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587357.1
ENST00000587854.1
CDS-3UTR CAA 90 bp AGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGAACTCCAGCCTGACGTaGGCGGCCACTGGATCTGCT +
Preference number: 5 (lower is better)
Translates to: RVRTALGTWALSVISPIQNSSLT*AATGSA
Trigger: AGCAGATCCAGTGGCCGCCAACGTCAGGCTGGAGTT...CTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp GAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGGGCAGGTGTGTCTGCTaGGCGTCCCTCAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ETRGSARQKDAGSLHLQRGRCVC*ASLSCR
Trigger: CCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCC...CCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp GGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCACTTCCCAGCTGGCGACCATTCCCTGTCCTaGTCGCAGCATGGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: GPWLPRSWRRSCWHFPAGDHSLS*SQHGGS
Trigger: TGACCCTCCATGCTGCGACAAGGACAGGGAATGGTC...GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp GGGAGACACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAAGTCAGCTTCTGGCTaGAGCTGGGCAGCACCGGGT +
Preference number: 5 (lower is better)
Translates to: GRHQAHSDRPFPVLVAAWKSASG*SWAAPG
Trigger: ACCCGGTGCTGCCCAGCTCAAGCCAGAAGCTGACTT...CCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGTGTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp GGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCACTTCCCAGCTGGCGGCCTGTCCCATGCATaGCAGGATGTTGAGCGGCTT +
Preference number: 5 (lower is better)
Translates to: GPWLPRSWRRSCWHFPAGGLSHA*QDVERL
Trigger: AAGCCGCTCAACATCCTGCAATGCATGGGACAGGCC...GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp GCAGGTGTGTCTGCTTGGCGTCCCTCAGCTGCAGGGGACCCTGGCTTCCACGAAGCTGAGATCGCATCATaGTACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: AGVSAWRPSAAGDPGFHEAEIAS*YSSLGD
Trigger: GTCACCCAGGCTGGAGTACAATGATGCGATCTCAGC...TTCGTGGAAGCCAGGGTCCCCTGCAGCTGAGGGACGCCAAGCAGACACACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp GGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGAGACCGCGCCCGGCCTTTaGTTTCTGAAATTCAGGTGC +
Preference number: 5 (lower is better)
Translates to: GRGRSQSSRPYRQELAGETAPGL*FLKFRC
Trigger: GCACCTGAATTTCAGAAACAAAAGGCCGGGCGCGGT...CTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588572.6
CDS-3UTR CAA 90 bp GGACCCTGGCTTCCACGAAGTTGGAGGCGTTCATGCTGGCACTTCCCAGCTGGCAAGGCTCTGGGGACGTaGCATGAACAGGAAGCCCTC +
Preference number: 5 (lower is better)
Translates to: GPWLPRSWRRSCWHFPAGKALGT*HEQEAL
Trigger: GAGGGCTTCCTGTTCATGCAACGTCCCCAGAGCCTT...GCCAGCTGGGAAGTGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp CCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGACCATTCCCTGTCCTaGTCGCAGCATGGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: PFPVLVAAWRVRTALGTWDHSLS*SQHGGS
Trigger: TGACCCTCCATGCTGCGACAAGGACAGGGAATGGTC...CCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp CTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGACCATTCCCTGTCCTaGTCGCAGCATGGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: LRDVGALSHLAHTDRSWLDHSLS*SQHGGS
Trigger: TGACCCTCCATGCTGCGACAAGGACAGGGAATGGTC...CAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp GTGGGCGCTCTCAGTCATCTCGCCCATACAGACAGGAGCTGGCTGGGGAGGGCAATGCATTGCAGGATGTaGAGCGGCTTCTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: VGALSHLAHTDRSWLGRAMHCRM*SGFSGL
Trigger: GAGACCAGAGAAGCCGCTCAACATCCTGCAATGCAT...TGCCCTCCCCAGCCAGCTCCTGTCTGTATGGGCGAGATGACTGAGAGCGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp TTCTGTGACTCAGAGAGGGGTCCTGCCCCCGTGGTTCTGCCAGCGCCTCTGTGCATGCATTGCAGGATGTaGAGCGGCTTCTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: FCDSERGPAPVVLPAPLCMHCRM*SGFSGL
Trigger: GAGACCAGAGAAGCCGCTCAACATCCTGCAATGCAT...GCACAGAGGCGCTGGCAGAACCACGGGGGCAGGACCCCTCTCTGAGTCACAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR CAA 90 bp GTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCGCTGAGATCGCATCATaGTACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: VAAWRVRTALGTWALSVIAEIAS*YSSLGD
Trigger: GTCACCCAGGCTGGAGTACAATGATGCGATCTCAGC...GATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp GACAGGAAGAAACGGTGGTGGCAGAGGGTCCTCTGGTCGAAGCCTGGGCCTGAGGCGAAAATCCCGTTCTaGATCTGCTCGTTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: DRKKRWWQRVLWSKPGPEAKIPF*ICSFQL
Trigger: GAGCTGGAACGAGCAGATCAAGAACGGGATTTTCGC...CTCAGGCCCAGGCTTCGACCAGAGGACCCTCTGCCACCACCGTTTCTTCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp GTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACACTGGCTTCCACGAAGTaGGAGGCGTTCATGCTGGCA +
Preference number: 5 (lower is better)
Translates to: VRTALGTWALSVISPIQTLASTK*EAFMLA
Trigger: TGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAG...TGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp GGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTGGCAGGTGTGTCTGCTaGGCGTCCCTCAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GLRTPSYTWRPEQGKQGTGRCVC*ASLSCR
Trigger: CCTGCAGCTGAGGGACGCCAAGCAGACACACCTGCC...AGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp AGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGAAATGTCTCCAGACCTaGCCTGATGTCCCCATGGCG +
Preference number: 5 (lower is better)
Translates to: RVRTALGTWALSVISPIQKCLQT*PDVPMA
Trigger: CGCCATGGGGACATCAGGCAAGGTCTGGAGACATTT...CTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp CCATTCCCTGTCCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGAAATGTCTCCAGACCTaGCCTGATGTCCCCATGGCG +
Preference number: 5 (lower is better)
Translates to: PFPVLVAAWRVRTALGTWKCLQT*PDVPMA
Trigger: CGCCATGGGGACATCAGGCAAGGTCTGGAGACATTT...CCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGGACAGGGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp GGGTGGATAACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCACCCCATTCTTGGGTaGTGGTCAGAGACGGAGCCA +
Preference number: 5 (lower is better)
Translates to: GWITETRGSARQKDAGSLHPILG*WSETEP
Trigger: TGGCTCCGTCTCTGACCACAACCCAAGAATGGGGTG...CAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTTATCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp GGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTCGGCACTCCTTGGCCTaGGAGCCATCTGGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: GLRTPSYTWRPEQGKQGTRHSLA*EPSGWD
Trigger: GTCCCACCCAGATGGCTCCAAGGCCAAGGAGTGCCG...AGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR CAA 90 bp GGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCGCGCCTCAGGGAGTACCCGTaGGGAAAACCAGCACCCCAG +
Preference number: 5 (lower is better)
Translates to: GSARQKDAGSLHLQRKPRLREYP*GKPAPQ
Trigger: CTGGGGTGCTGGTTTTCCCAACGGGTACTCCCTGAG...GCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS-3UTR CAA 90 bp AACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAAACTCCAGCCTGACGTaGGCGGCCACTGGATCTGCT +
Preference number: 5 (lower is better)
Translates to: NRDPGLRETKRCRITASSNSSLT*AATGSA
Trigger: AGCAGATCCAGTGGCCGCCAACGTCAGGCTGGAGTT...TGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000593184.5
CDS-3UTR CAA 90 bp CAGAGCACCTGGAGGAGGTGTTCGGAGTTTGCACAGGTGATGGTCCACCAGGCTTGGGGCAGTCAGATTTaGCCGGCGAAAATCCCGTTC +
Preference number: 5 (lower is better)
Translates to: QSTWRRCSEFAQVMVHQAWGSQI*PAKIPF
Trigger: GAACGGGATTTTCGCCGGCAAAATCTGACTGCCCCA...AGCCTGGTGGACCATCACCTGTGCAAACTCCGAACACCTCCTCCAGGTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR CAA 90 bp CATTATTCGTGGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTGGCTTCCACGAAGTaGGAGGCGTTCATGCTGGCA +
Preference number: 5 (lower is better)
Translates to: HYSWLRHWEVGVDNRDPGLASTK*EAFMLA
Trigger: TGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAG...CCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp GAGCAAGGGAAACAAGGAACTCGAAGGCTGGTGGCTGGGAGGTTGCTGAGACTGCTGGCTTCCACGAAGTaGGAGGCGTTCATGCTGGCA +
Preference number: 5 (lower is better)
Translates to: EQGKQGTRRLVAGRLLRLLASTK*EAFMLA
Trigger: TGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAG...CAGTCTCAGCAACCTCCCAGCCACCAGCCTTCGAGTTCCTTGTTTCCCTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR CAA 90 bp CCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCGACCATTCCCTGTCCTaGTCGCAGCATGGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: PGAPRDKKMQDHCIFRGSDHSLS*SQHGGS
Trigger: TGACCCTCCATGCTGCGACAAGGACAGGGAATGGTC...GCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp TCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCGCGCTGGAAGTCAGCTTCTGGCTaGAGCTGGGCAGCACCGGGT +
Preference number: 5 (lower is better)
Translates to: SARQKDAGSLHLQRKPRWKSASG*SWAAPG
Trigger: ACCCGGTGCTGCCCAGCTCAAGCCAGAAGCTGACTT...CCAGCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp AATGGTGAGGGCGTTAGAAACTGGCGATCAGGGTTTCCTGGCCTCCGCACTGCTGGCCTGTCCCATGCATaGCAGGATGTTGAGCGGCTT +
Preference number: 5 (lower is better)
Translates to: NGEGVRNWRSGFPGLRTAGLSHA*QDVERL
Trigger: AAGCCGCTCAACATCCTGCAATGCATGGGACAGGCC...AGCAGTGCGGAGGCCAGGAAACCCTGATCGCCAGTTTCTAACGCCCTCACCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp AGACACCAGGCCCATAGTGACCGACCATTCCCTGTCCTTGTCGCAGCATGGAGGGCTGAGATCGCATCATaGTACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: RHQAHSDRPFPVLVAAWRAEIAS*YSSLGD
Trigger: GTCACCCAGGCTGGAGTACAATGATGCGATCTCAGC...CCTCCATGCTGCGACAAGGACAGGGAATGGTCGGTCACTATGGGCCTGGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp ACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGTGTCTAGGGTCACCCTaGGAGCCATCTGGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: TRGSARQKDAGSLHLQRKCLGSP*EPSGWD
Trigger: GTCCCACCCAGATGGCTCCAAGGGTGACCCTAGACA...CTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590900.5
CDS-3UTR CAA 90 bp CCCCTCTGGAAGGCTGATAGCTCAGGGAGTACCCGTTGGGAAAACCAGCACCCCTCTAGGGTGTGTCCTTaGAACCCTGGGGTTGAACAG +
Preference number: 5 (lower is better)
Translates to: PLWKADSSGSTRWENQHPSRVCP*NPGVEQ
Trigger: CTGTTCAACCCCAGGGTTCAAAGGACACACCCTAGA...GGGGTGCTGGTTTTCCCAACGGGTACTCCCTGAGCTATCAGCCTTCCAGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000593184.5
CDS CCA 90 bp TCAAGAAGCTTGTCTAGGGTCACCCATTATTCGTGGCTTAGACACTaGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTCCGCGAGACA +
Preference number: 5 (lower is better)
Translates to: SRSLSRVTHYSWLRH*EVGVDNRDPGLRET
Trigger: TGTCTCGCGGAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATGGGTGACCCTAGACAAGCTTCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586191.1
CDS CCA 90 bp GGCTCACACAGGTCAAGAAGCTTGTCTAGGGTCACCCATTATTCGTaGCTTAGACACTGGGAGGTAGGGGTGGATAACCGAGACCCGGGG +
Preference number: 5 (lower is better)
Translates to: GSHRSRSLSRVTHYS*LRHWEVGVDNRDPG
Trigger: CCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATGGGTGACCCTAGACAAGCTTCTTGACCTGTGTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586191.1
CDS-3UTR CAA 90 bp AATGGTGAGGGCGTTAGAAACTGGCGATCAGGGTTTCCTGGCCTCCGCACTGCTTGGGGCAGTCAGATTTaGCCGGCGAAAATCCCGTTC +
Preference number: 5 (lower is better)
Translates to: NGEGVRNWRSGFPGLRTAWGSQI*PAKIPF
Trigger: GAACGGGATTTTCGCCGGCAAAATCTGACTGCCCCA...AGCAGTGCGGAGGCCAGGAAACCCTGATCGCCAGTTTCTAACGCCCTCACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp GAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGTGGGGCAGTCAGATTTaGCCGGCGAAAATCCCGTTC +
Preference number: 5 (lower is better)
Translates to: ETRGSARQKDAGSLHLQRWGSQI*PAKIPF
Trigger: GAACGGGATTTTCGCCGGCAAAATCTGACTGCCCCA...CCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp GTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTCATCTCGCCCATACAGACAATGCATTGCAGGATGTaGAGCGGCTTCTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: VRTALGTWALSVISPIQTMHCRM*SGFSGL
Trigger: GAGACCAGAGAAGCCGCTCAACATCCTGCAATGCAT...TGTCTGTATGGGCGAGATGACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp ACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGAAGGCTCTGGGGACGTaGCATGAACAGGAAGCCCTC +
Preference number: 5 (lower is better)
Translates to: TRGSARQKDAGSLHLQRKKALGT*HEQEAL
Trigger: GAGGGCTTCCTGTTCATGCAACGTCCCCAGAGCCTT...CTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp AACCGAGACCCGGGGCTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCATGGGGCAGTCAGATTTaGCCGGCGAAAATCCCGTTC +
Preference number: 5 (lower is better)
Translates to: NRDPGLRETKRCRITASSWGSQI*PAKIPF
Trigger: GAACGGGATTTTCGCCGGCAAAATCTGACTGCCCCA...TGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAGCCCCGGGTCTCGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp GGCCTGAGAACCCCATCATACACGTGGAGACCAGAGCAAGGGAAACAAGGAACTCTGGCTTCCACGAAGTaGGAGGCGTTCATGCTGGCA +
Preference number: 5 (lower is better)
Translates to: GLRTPSYTWRPEQGKQGTLASTK*EAFMLA
Trigger: TGCCAGCATGAACGCCTCCAACTTCGTGGAAGCCAG...AGTTCCTTGTTTCCCTTGCTCTGGTCTCCACGTGTATGATGGGGTTCTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000590900.5
ENST00000593184.5
CDS-3UTR CAA 90 bp CTCCGCGAGACAAAAAGATGCAGGATCACTGCATCTTCAGAGGAAGCCGCGCTGAAATGTCTCCAGACCTaGCCTGATGTCCCCATGGCG +
Preference number: 5 (lower is better)
Translates to: LRETKRCRITASSEEAALKCLQT*PDVPMA
Trigger: CGCCATGGGGACATCAGGCAAGGTCTGGAGACATTT...CAGCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATCTTTTTGTCTCGCGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS-3UTR CAA 90 bp CCTTGTCGCAGCATGGAGGGTCAGGACAGCCTTAGGGACGTGGGCGCTCTCAGTGAAATTCAGGTGCTGTaGCCACAGCTCTTAGACAAA +
Preference number: 5 (lower is better)
Translates to: PCRSMEGQDSLRDVGALSEIQVL*PQLLDK
Trigger: TTTGTCTAAGAGCTGTGGCAACAGCACCTGAATTTC...ACTGAGAGCGCCCACGTCCCTAAGGCTGTCCTGACCCTCCATGCTGCGACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588572.6
CDS-3UTR CAA 90 bp TTTATAGGGGGTTCAGAGCGTTCATCACATTCTCACAAGTTTCTGTATCCGCCTTGGGGCAGTCAGATTTaGCCGGCGAAAATCCCGTTC +
Preference number: 5 (lower is better)
Translates to: FIGGSERSSHSHKFLYPPWGSQI*PAKIPF
Trigger: GAACGGGATTTTCGCCGGCAAAATCTGACTGCCCCA...AGGCGGATACAGAAACTTGTGAGAATGTGATGAACGCTCTGAACCCCCTATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000593184.5
CDS CCA 72 bp CGAAGGAGGCAACTCCAGCCTGACGTTGGCGGCCACTaGATCTGCTGTGGGATGGTCCCGGGGTGCCGCTCG +
Preference number: 6 (lower is better)
Translates to: RRRQLQPDVGGH*ICCGMVPGCRS
Trigger: CGAGCGGCACCCCGGGACCATCCCACAGCAGATCCAGTGGCCGCCAACGTCAGGCTGGAGTTGCCTCCTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326529.9
ENST00000587357.1
ENST00000589467.1
ENST00000593184.5
CDS GCA 72 bp AGGCAACTCCAGCCTGACGTTGGCGGCCACTGGATCTaGTGTGGGATGGTCCCGGGGTGCCGCTCGCTTCTG +
Preference number: 6 (lower is better)
Translates to: RQLQPDVGGHWI*CGMVPGCRSLL
Trigger: CAGAAGCGAGCGGCACCCCGGGACCATCCCACAGCAGATCCAGTGGCCGCCAACGTCAGGCTGGAGTTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326529.9
ENST00000589467.1
CDS GCA 72 bp GCTTCCACATCCAACATCCACGAAGGAGGCAACTCCTaGGAGACGGGACGGGACGGGGACTCCGTGGGGCCG +
Preference number: 6 (lower is better)
Translates to: ASTSNIHEGGNS*ETGRDGDSVGP
Trigger: CGGCCCCACGGAGTCCCCGTCCCGTCCCGTCTCGCAGGAGTTGCCTCCTTCGTGGATGTTGGATGTGGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587854.1
CDS CCA 72 bp AGCGCGGGTCGAAGGGCGGCGTCGACCATTTCCCCTTaGGGGGCTCCTGGGCTTCCACATCCAACATCCACG +
Preference number: 6 (lower is better)
Translates to: SAGRRAASTISP*GAPGLPHPTST
Trigger: CGTGGATGTTGGATGTGGAAGCCCAGGAGCCCCCCAAGGGGAAATGGTCGACGCCGCCCTTCGACCCGCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000326529.9
ENST00000587357.1
ENST00000587854.1
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS CCA 72 bp GAGAGTGGGGGAGGAAGGGATGGAGTCAGCGCTGGGTaGTACAAAGAAGACCCCTCAGGACCCGAGATGGGA +
Preference number: 6 (lower is better)
Translates to: ESGGGRDGVSAG*YKEDPSGPEMG
Trigger: TCCCATCTCGGGTCCTGAGGGGTCTTCTTTGTACCACCCAGCGCTGACTCCATCCCTTCCTCCCCCACTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589879.1
CDS CCA 72 bp TGCCGTCCCTTGTCACACCCTGCTCCTCCCATAACCTaGCTGAGCAGGTCTCACCCAGGAAGTTCTGGTAGC +
Preference number: 6 (lower is better)
Translates to: CRPLSHPAPPIT*LSRSHPGSSGS
Trigger: GCTACCAGAACTTCCTGGGTGAGACCTGCTCAGCCAGGTTATGGGAGGAGCAGGGTGTGACAAGGGACGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587357.1
ENST00000587854.1
CDS CCA 72 bp TCAGGAGGCTGGCTGTGGGTGCGGGTGCCGAAAGCGTaGACACCAGGGGATTCTGTTGGAAATAAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: SGGWLWVRVPKA*TPGDSVGNKLA
Trigger: AGCCAGCTTATTTCCAACAGAATCCCCTGGTGTCCACGCTTTCGGCACCCGCACCCACAGCCAGCCTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589879.1
CDS CAA 90 bp GGATCACTGCATCTTCAGAGGAAGCCGCGCTGGGGCAGTCAGATTTaGCCGGCGAAAATCCCGTTCTTGATCTGCTCGTTCCAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: GSLHLQRKPRWGSQI*PAKIPFLICSFQLS
Trigger: GGAGAGCTGGAACGAGCAGATCAAGAACGGGATTTTCGCCGGCAAAATCTGACTGCCCCAGCGCGGCTTCCTCTGAAGATGCAGTGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS CCA 72 bp GATGCAGGATCACTGCATCTTCAGAGGAAGCCGCGCTaGGGCAGTCAGATTTTGCCGGCGAAAATCCCGTTC +
Preference number: 6 (lower is better)
Translates to: DAGSLHLQRKPR*GSQILPAKIPF
Trigger: GAACGGGATTTTCGCCGGCAAAATCTGACTGCCCCAGCGCGGCTTCCTCTGAAGATGCAGTGATCCTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS CCA 72 bp TTGTCTAGGGTCACCCATTATTCGTGGCTTAGACACTaGGAGGTAGGGGTGGATAACCGAGACCCGGGGCTC +
Preference number: 6 (lower is better)
Translates to: LSRVTHYSWLRH*EVGVDNRDPGL
Trigger: GAGCCCCGGGTCTCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATGGGTGACCCTAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586191.1
CDS CAA 72 bp CATCTTCAGAGGAAGCCGCGCTGGGGCAGTCAGATTTaGCCGGCGAAAATCCCGTTCTTGATCTGCTCGTTC +
Preference number: 6 (lower is better)
Translates to: HLQRKPRWGSQI*PAKIPFLICSF
Trigger: GAACGAGCAGATCAAGAACGGGATTTTCGCCGGCAAAATCTGACTGCCCCAGCGCGGCTTCCTCTGAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326529.9
ENST00000588572.6
ENST00000589467.1
ENST00000590900.5
ENST00000593184.5
CDS CAA 72 bp CCTTGGGGAACCTCGGGCTCACACAGGTCAAGAAGCTaGTCTAGGGTCACCCATTATTCGTGGCTTAGACAC +
Preference number: 6 (lower is better)
Translates to: PWGTSGSHRSRS*SRVTHYSWLRH
Trigger: GTGTCTAAGCCACGAATAATGGGTGACCCTAGACAAGCTTCTTGACCTGTGTGAGCCCGAGGTTCCCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586191.1
CDS CAA 90 bp CTTGGTTTGCCTTGGGGAACCTCGGGCTCACACAGGTCAAGAAGCTaGTCTAGGGTCACCCATTATTCGTGGCTTAGACACTGGGAGGTA +
Preference number: 6 (lower is better)
Translates to: LGLPWGTSGSHRSRS*SRVTHYSWLRHWEV
Trigger: TACCTCCCAGTGTCTAAGCCACGAATAATGGGTGACCCTAGACAAGCTTCTTGACCTGTGTGAGCCCGAGGTTCCCCAAGGCAAACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586191.1
CDS CCA 72 bp AGGTCAAGAAGCTTGTCTAGGGTCACCCATTATTCGTaGCTTAGACACTGGGAGGTAGGGGTGGATAACCGA +
Preference number: 6 (lower is better)
Translates to: RSRSLSRVTHYS*LRHWEVGVDNR
Trigger: TCGGTTATCCACCCCTACCTCCCAGTGTCTAAGCCACGAATAATGGGTGACCCTAGACAAGCTTCTTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586191.1