Pregenerated sensors for COX6B1 (Homo sapiens)
Ensembl gene IDs: ENSG00000126267Ensembl transcript IDs: ENST00000392201.1, ENST00000592141.6, ENST00000652250.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGATGACGCTGCGGCCCCTCCAACGTCCAAAAGGGAGGATGGACTaGACACCCGGGAGCCAGGCTGCGGCCCAGGCAAGCCGCGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: EMTLRPLQRPKGRMD*TPGSQAAAQASRER Trigger: CCTCTCGCGGCTTGCCTGGGCCGCAGCCTGGCTCCCGGGTGTCCAGTCCATCCTCCCTTTTGGACGTTGGAGGGGCCGCAGCGTCATCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592141.6 |
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| CDS TCA 90 bp | GGGAGCCAGGCTGCGGCCCAGGCAAGCCGCGAGAGGCCACGCCTGTaGATTAGCCATGAAGAGCCCTGGAGGACAAACTCCTGGGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: GSQAAAQASRERPRL*ISHEEPWRTNSWAK Trigger: TTTGGCCCAGGAGTTTGTCCTCCAGGGCTCTTCATGGCTAATTCACAGGCGTGGCCTCTCGCGGCTTGCCTGGGCCGCAGCCTGGCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592141.6 |
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| CDS TCA 90 bp | CATGGTGCTGAATCCCGGTATCTGAGGATGAGGGTGCATCGGAGATaGCGCTGCGGCCCCTCCAACGTCCAAAAGGGAGGATGGACTGGA | + |
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Preference number: 5 (lower is better) Translates to: HGAESRYLRMRVHRR*RCGPSNVQKGGWTG Trigger: TCCAGTCCATCCTCCCTTTTGGACGTTGGAGGGGCCGCAGCGTCATCTCCGATGCACCCTCATCCTCAGATACCGGGATTCAGCACCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592141.6 |
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| CDS TCA 90 bp | CCAGGATCAATGGAAGAGGGCAGGCACGGAACAATGGGCTGGGTGTaGACAAGTTCCTGCCTCTCAACATACACAGAGATGAGGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PGSMEEGRHGTMGWV*TSSCLSTYTEMRGR Trigger: CCTGCCCCTCATCTCTGTGTATGTTGAGAGGCAGGAACTTGTTCACACCCAGCCCATTGTTCCGTGCCTGCCCTCTTCCATTGATCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652250.1 |
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| CDS CCA 90 bp | AGCCAGACTACCCAGGATCAATGGAAGAGGGCAGGCACGGAACAATaGGCTGGGTGTGAACAAGTTCCTGCCTCTCAACATACACAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SQTTQDQWKRAGTEQ*AGCEQVPASQHTQR Trigger: TCTCTGTGTATGTTGAGAGGCAGGAACTTGTTCACACCCAGCCCATTGTTCCGTGCCTGCCCTCTTCCATTGATCCTGGGTAGTCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652250.1 |
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| CDS TCA 90 bp | TTACTATCACCATTGCCCAGACGAGGAAGGAACAGGGTGTCTAAGTaGCTTCCTACGGTTAAACGGCATAAAAATAACTGGTGGGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LLSPLPRRGRNRVSK*LPTVKRHKNNWWAA Trigger: GGCAGCCCACCAGTTATTTTTATGCCGTTTAACCGTAGGAAGTCACTTAGACACCCTGTTCCTTCCTCGTCTGGGCAATGGTGATAGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652250.1 |
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| CDS GCA 90 bp | ACTCCTATAGCCACTCTAAAAGGTAGGAACTATTACTATCACCATTaGCCAGACGAGGAAGGAACAGGGTGTCTAAGTGACTTCCTACGG | + |
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Preference number: 5 (lower is better) Translates to: TPIATLKGRNYYYHH*PDEEGTGCLSDFLR Trigger: CCGTAGGAAGTCACTTAGACACCCTGTTCCTTCCTCGTCTGGGCAATGGTGATAGTAATAGTTCCTACCTTTTAGAGTGGCTATAGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652250.1 |
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| CDS GCA 72 bp | AAAAGGGAGGATGGACTGGACACCCGGGAGCCAGGCTaGGGCCCAGGCAAGCCGCGAGAGGCCACGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: KREDGLDTREPG*GPGKPREATPV Trigger: CACAGGCGTGGCCTCTCGCGGCTTGCCTGGGCCGCAGCCTGGCTCCCGGGTGTCCAGTCCATCCTCCCTTTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592141.6 |
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| CDS CCA 72 bp | CTGCGGCCCCTCCAACGTCCAAAAGGGAGGATGGACTaGACACCCGGGAGCCAGGCTGCGGCCCAGGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: LRPLQRPKGRMD*TPGSQAAAQAS Trigger: GCTTGCCTGGGCCGCAGCCTGGCTCCCGGGTGTCCAGTCCATCCTCCCTTTTGGACGTTGGAGGGGCCGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592141.6 |
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| CDS TCA 72 bp | TCTACCCGGTATCTGAGGATGAGGGTGCATCGGAGATaGCGCTGCGGCCCCTCCAACGTCCAAAAGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: STRYLRMRVHRR*RCGPSNVQKGG Trigger: TCCTCCCTTTTGGACGTTGGAGGGGCCGCAGCGTCATCTCCGATGCACCCTCATCCTCAGATACCGGGTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392201.1 |
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| CDS TCA 72 bp | GAATCCCGGTATCTGAGGATGAGGGTGCATCGGAGATaGCGCTGCGGCCCCTCCAACGTCCAAAAGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: ESRYLRMRVHRR*RCGPSNVQKGG Trigger: TCCTCCCTTTTGGACGTTGGAGGGGCCGCAGCGTCATCTCCGATGCACCCTCATCCTCAGATACCGGGATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592141.6 |
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| CDS TCA 72 bp | TACACAGAGATGAGGGGCAGGGCGAATCCACACATCTaGGTGTCGAGGTCGCGGCAGGGTTGGGGTACAACT | + |
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Preference number: 6 (lower is better) Translates to: YTEMRGRANPHI*VSRSRQGWGTT Trigger: AGTTGTACCCCAACCCTGCCGCGACCTCGACACTCAGATGTGTGGATTCGCCCTGCCCCTCATCTCTGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652250.1 |
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| CDS CAA 72 bp | GAATCCACACATCTGAGTGTCGAGGTCGCGGCAGGGTaGGGGTACAACTCCTCAGCAAAATCAAGCCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: ESTHLSVEVAAG*GYNSSAKSSLV Trigger: GACCAGGCTTGATTTTGCTGAGGAGTTGTACCCCAACCCTGCCGCGACCTCGACACTCAGATGTGTGGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652250.1 |
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| CDS CCA 72 bp | ACCCAGGATCAATGGAAGAGGGCAGGCACGGAACAATaGGCTGGGTGTGAACAAGTTCCTGCCTCTCAACAT | + |
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Preference number: 6 (lower is better) Translates to: TQDQWKRAGTEQ*AGCEQVPASQH Trigger: ATGTTGAGAGGCAGGAACTTGTTCACACCCAGCCCATTGTTCCGTGCCTGCCCTCTTCCATTGATCCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652250.1 |
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| CDS GCA 72 bp | GCCACTCTAAAAGGTAGGAACTATTACTATCACCATTaGCCAGACGAGGAAGGAACAGGGTGTCTAAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: ATLKGRNYYYHH*PDEEGTGCLSD Trigger: GTCACTTAGACACCCTGTTCCTTCCTCGTCTGGGCAATGGTGATAGTAATAGTTCCTACCTTTTAGAGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652250.1 |
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