Pregenerated sensors for COX4I2 (Homo sapiens)
Ensembl gene IDs: ENSG00000131055Ensembl transcript IDs: ENST00000376075.4, ENST00000490030.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGGGCCTGCTCCTCAGCGTTGAGTTCTGTGCAGAAGGGCTCTTCTaGCATGGGGTAGTAGCGCTGGGCATAGCAGTTGGTGTAGGGGGA | + |
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Preference number: 5 (lower is better) Translates to: QGLLLSVEFCAEGLF*HGVVALGIAVGVGG Trigger: TCCCCCTACACCAACTGCTATGCCCAGCGCTACTACCCCATGCCAGAAGAGCCCTTCTGCACAGAACTCAACGCTGAGGAGCAGGCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000376075.4 ENST00000490030.1 |
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| CDS TCA 90 bp | CCAGCATGCGCTGCAGCTGCTGGGCTTTCCGCTCGTCCGTCAAGGTaGTCGGCTTTGGAGGAAATACGTAGACCCGCTGCCACCAAATCA | + |
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Preference number: 5 (lower is better) Translates to: PACAAAAGLSARPSR*SALEEIRRPAATKS Trigger: TGATTTGGTGGCAGCGGGTCTACGTATTTCCTCCAAAGCCGATCACCTTGACGGACGAGCGGAAAGCCCAGCAGCTGCAGCGCATGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376075.4 |
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| CDS GCA 90 bp | CTTTGGAGGAAATACGTAGACCCGCTGCCACCAAATCACCAGAGCTaGGAATCCAATGAAGAAGAAGACACAACCCATCACTGTCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: LWRKYVDPLPPNHQS*ESNEEEDTTHHCLP Trigger: TGGAAGACAGTGATGGGTTGTGTCTTCTTCTTCATTGGATTCGCAGCTCTGGTGATTTGGTGGCAGCGGGTCTACGTATTTCCTCCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376075.4 |
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| CDS TCA 72 bp | GCTGCAGCTGCTGGGCTTTCCGCTCGTCCGTCAAGGTaGTCGGCTTTGGAGGAAATACGTAGACCCGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: AAAAGLSARPSR*SALEEIRRPAA Trigger: GGCAGCGGGTCTACGTATTTCCTCCAAAGCCGATCACCTTGACGGACGAGCGGAAAGCCCAGCAGCTGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376075.4 |
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| CDS CCA 72 bp | TTGAACTGGAGCCGGTACAAGGCCACCTTTTCGGCGTaGGTCAGCTGGGTCCAGCTTCCCTTCTCCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LNWSRYKATFSA*VSWVQLPFSFS Trigger: GGAGAAGGAGAAGGGAAGCTGGACCCAGCTGACCCACGCCGAAAAGGTGGCCTTGTACCGGCTCCAGTTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376075.4 |
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| CDS TCA 72 bp | GCTGCAGCTGCTGGGCTTTCCGCTCGTCCGTCAAGGTaGTCGGCTTTGGAGGAAATAAGGCCACCTTTTCGG | + |
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Preference number: 6 (lower is better) Translates to: AAAAGLSARPSR*SALEEIRPPFR Trigger: CCGAAAAGGTGGCCTTATTTCCTCCAAAGCCGATCACCTTGACGGACGAGCGGAAAGCCCAGCAGCTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490030.1 |
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| CDS CCA 72 bp | GAGCGACGGTTCATCTCCGCAAAGGTCTCATTGAACTaGAGCCGGTACAAGGCCACCTTTTCGGCGTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: ERRFISAKVSLN*SRYKATFSAWV Trigger: GACCCACGCCGAAAAGGTGGCCTTGTACCGGCTCCAGTTCAATGAGACCTTTGCGGAGATGAACCGTCGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376075.4 |
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| CDS CCA 72 bp | CTCCTCAGCGTTGAGTTCTGTGCAGAAGGGCTCTTCTaGCATGGGGTAGTAGCGCTGGGCATAGCAGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LLSVEFCAEGLF*HGVVALGIAVG Trigger: ACCAACTGCTATGCCCAGCGCTACTACCCCATGCCAGAAGAGCCCTTCTGCACAGAACTCAACGCTGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376075.4 ENST00000490030.1 |
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| CDS CCA 72 bp | ATCGGCTTTGGAGGAAATAAGGCCACCTTTTCGGCGTaGGTCAGCTGGGTCCAGCTTCCCTTCTCCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: IGFGGNKATFSA*VSWVQLPFSFS Trigger: GGAGAAGGAGAAGGGAAGCTGGACCCAGCTGACCCACGCCGAAAAGGTGGCCTTATTTCCTCCAAAGCCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490030.1 |
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| CDS TCA 72 bp | CATTGGAGCGACGGTTCATCTCCGCAAAGGTCTCATTaGACTGGAGCCGGTACAAGGCCACCTTTTCGGCGT | + |
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Preference number: 6 (lower is better) Translates to: HWSDGSSPQRSH*TGAGTRPPFRR Trigger: ACGCCGAAAAGGTGGCCTTGTACCGGCTCCAGTTCAATGAGACCTTTGCGGAGATGAACCGTCGCTCCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376075.4 |
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| CDS CAA 72 bp | TCATTGGAGCGACGGTTCATCTCCGCAAAGGTCTCATaGAACTGGAGCCGGTACAAGGCCACCTTTTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: SLERRFISAKVS*NWSRYKATFSA Trigger: CGCCGAAAAGGTGGCCTTGTACCGGCTCCAGTTCAATGAGACCTTTGCGGAGATGAACCGTCGCTCCAATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376075.4 |
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| CDS TCA 72 bp | CCCGCTGCCACCAAATCACCAGAGCTGCGAATCCAATaGAGAAGAAGACACAACCCATCACTGTCTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: PAATKSPELRIQ*RRRHNPSLSST Trigger: AGTGGAAGACAGTGATGGGTTGTGTCTTCTTCTTCATTGGATTCGCAGCTCTGGTGATTTGGTGGCAGCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376075.4 |
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