RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COX19 (Homo sapiens)

Ensembl gene IDs: ENSG00000240230

Ensembl transcript IDs: ENST00000344111.4, ENST00000457254.5, ENST00000466146.1, ENST00000466853.1

Found 411 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCGACCCGGGCCTGGGCACTCCCGACGGCGGGTCAGAGTGCGATaGGAAGAGGCCCCGGCCTGGGCCCGGGAGCTCCGTCGGCATGGT +
Preference number: 1 (lower is better)
Translates to: ARPGPGHSRRRVRVR*EEAPAWARELRRHG
Trigger: ACCATGCCGACGGAGCTCCCGGGCCCAGGCCGGGGCCTCTTCCCATCGCACTCTGACCCGCCGTCGGGAGTGCCCAGGCCCGGGTCGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp GGGTCAGAGTGCGGTGCGAGCGGAGAGGCAGGCCCGACCCGGGCCTaGGCACTCCCGACGGCGGGTCAGAGTGCGATGGGAAGAGGCCCC +
Preference number: 1 (lower is better)
Translates to: GSECGASGEAGPTRA*ALPTAGQSAMGRGP
Trigger: GGGGCCTCTTCCCATCGCACTCTGACCCGCCGTCGGGAGTGCCCAGGCCCGGGTCGGGCCTGCCTCTCCGCTCGCACCGCACTCTGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp GGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTaGGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTG +
Preference number: 1 (lower is better)
Translates to: GDTVPSGTPPGRCGL*GSLPAVAAGLRGPL
Trigger: CAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp GGCACAGACGGGCTGAGAACTCCGCTCAGGGCCCCTGCCAGGCTGTaGTGCGAACACGTGCCGGGGTCTCGGGCGGAGCTGGCTGGCACA +
Preference number: 1 (lower is better)
Translates to: GTDGLRTPLRAPARL*CEHVPGSRAELAGT
Trigger: TGTGCCAGCCAGCTCCGCCCGAGACCCCGGCACGTGTTCGCAGCACAGCCTGGCAGGGGCCCTGAGCGGAGTTCTCAGCCCGTCTGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp AGAACCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTaGGGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGG +
Preference number: 1 (lower is better)
Translates to: RTRGDTVPSGTPPGR*GLCGSLPAVAAGLR
Trigger: CCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGGTTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp CACTCCCGACGGCGGGTCAGAGTGCGATGGGAAGAGGCCCCGGCCTaGGCCCGGGAGCTCCGTCGGCATGGTCTGTTGTGTTCCCCTCAC +
Preference number: 1 (lower is better)
Translates to: HSRRRVRVRWEEAPA*ARELRRHGLLCSPH
Trigger: GTGAGGGGAACACAACAGACCATGCCGACGGAGCTCCCGGGCCCAGGCCGGGGCCTCTTCCCATCGCACTCTGACCCGCCGTCGGGAGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp ACAGACGGGCTGAGAACTCCGCTCAGGGCCCCTGCCAGGCTGTGCTaGGAACACGTGCCGGGGTCTCGGGCGGAGCTGGCTGGCACAGAA +
Preference number: 1 (lower is better)
Translates to: TDGLRTPLRAPARLC*EHVPGSRAELAGTE
Trigger: TTCTGTGCCAGCCAGCTCCGCCCGAGACCCCGGCACGTGTTCGCAGCACAGCCTGGCAGGGGCCCTGAGCGGAGTTCTCAGCCCGTCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp CCACCTTTGGTCGACGGTCTTCCCCACACTCCTGATGGGTCAGAGTaGGGTGCGAGCGGAGAGGCAGGCCCGACCCGGGCCTGGGCACTC +
Preference number: 1 (lower is better)
Translates to: PPLVDGLPHTPDGSE*GASGEAGPTRAWAL
Trigger: GAGTGCCCAGGCCCGGGTCGGGCCTGCCTCTCCGCTCGCACCGCACTCTGACCCATCAGGAGTGTGGGGAAGACCGTCGACCAAAGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp AAACCGCCCCATACAAGAGGGCCCCGGCCTCGAAGACAAGGGTCTTaGCCCACGCTCGCCTCCCTCCCAGCTTTGCCGGGAACGCCGTCC +
Preference number: 1 (lower is better)
Translates to: KPPHTRGPRPRRQGS*PTLASLPALPGTPS
Trigger: GGACGGCGTTCCCGGCAAAGCTGGGAGGGAGGCGAGCGTGGGGCAAGACCCTTGTCTTCGAGGCCGGGGCCCTCTTGTATGGGGCGGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp AGGCAACTTTGGCACAGACGGGCTGAGAACTCCGCTCAGGGCCCCTaGCAGGCTGTGCTGCGAACACGTGCCGGGGTCTCGGGCGGAGCT +
Preference number: 1 (lower is better)
Translates to: RQLWHRRAENSAQGP*QAVLRTRAGVSGGA
Trigger: AGCTCCGCCCGAGACCCCGGCACGTGTTCGCAGCACAGCCTGGCAGGGGCCCTGAGCGGAGTTCTCAGCCCGTCTGTGCCAAAGTTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp GCTGAGGCCCCAGATGTGCAGGCACCTGCGTTCCATCCACAGGTTTaGGCCCCGGCTGGCCTGACGCACTGGGTGGACATGGGCCGGGTT +
Preference number: 1 (lower is better)
Translates to: AEAPDVQAPAFHPQV*APAGLTHWVDMGRV
Trigger: AACCCGGCCCATGTCCACCCAGTGCGTCAGGCCAGCCGGGGCCCAAACCTGTGGATGGAACGCAGGTGCCTGCACATCTGGGGCCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp AGCTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTaGCCACACCGCGTCAGCGCCGACTCCACGGTGGCTGCGTCACGG +
Preference number: 1 (lower is better)
Translates to: SSRHIAALRWRAHGT*PHRVSADSTVAASR
Trigger: CCGTGACGCAGCCACCGTGGAGTCGGCGCTGACGCGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp AGCGCCTGGACAGGATTCGGGACTATCCGCGGCTTCGGCACCTGCTaGGGTCTCGGAGCACACCCTGGCCAGGTGAGGGCGATCACTCCG +
Preference number: 1 (lower is better)
Translates to: SAWTGFGTIRGFGTC*GLGAHPGQVRAITP
Trigger: CGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAGCAGGTGCCGAAGCCGCGGATAGTCCCGAATCCTGTCCAGGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp TCCACTGCGTACTCCTGGGGCAGCATGGGCCTGTCCACCGCCTTCTaGAAGGCCGCCACCCACTCCCTCTGGTCGGACTCCGTCTCGCAG +
Preference number: 1 (lower is better)
Translates to: STAYSWGSMGLSTAF*KAATHSLWSDSVSQ
Trigger: CTGCGAGACGGAGTCCGACCAGAGGGAGTGGGTGGCGGCCTTCCAGAAGGCGGTGGACAGGCCCATGCTGCCCCAGGAGTACGCAGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR TCA 90 bp GGGCCGGGTTTCCGTGACCCACAGGCAACTTTGGCACAGACGGGCTaGGAACTCCGCTCAGGGCCCCTGCCAGGCTGTGCTGCGAACACG +
Preference number: 1 (lower is better)
Translates to: GPGFRDPQATLAQTG*ELRSGPLPGCAANT
Trigger: CGTGTTCGCAGCACAGCCTGGCAGGGGCCCTGAGCGGAGTTCTCAGCCCGTCTGTGCCAAAGTTGCCTGTGGGTCACGGAAACCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp GGCTTGGAGACAGCCACTGCCAGGGTCGCCAGAGAGGACGTGACCTaGACCTCCCCACCCCGTCTCCTGCCACCATCCTCCACTGACCAG +
Preference number: 1 (lower is better)
Translates to: GLETATARVAREDVT*TSPPRLLPPSSTDQ
Trigger: CTGGTCAGTGGAGGATGGTGGCAGGAGACGGGGTGGGGAGGTCCAGGTCACGTCCTCTCTGGCGACCCTGGCAGTGGCTGTCTCCAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp AACAGCGCCTGGACAGGATTCGGGACTATCCGCGGCTTCGGCACCTaGTGGGGTCTCGGAGCACACCCTGGCCAGGTGAGGGCGATCACT +
Preference number: 1 (lower is better)
Translates to: NSAWTGFGTIRGFGT*WGLGAHPGQVRAIT
Trigger: AGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAGCAGGTGCCGAAGCCGCGGATAGTCCCGAATCCTGTCCAGGCGCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp ACATTCAGGCCATGCAGTTGGGCAAGAGAACCAGAGGTGATACCGTaGCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTGCGGCTCGC +
Preference number: 1 (lower is better)
Translates to: TFRPCSWAREPEVIP*PQGRPQVGAACAAR
Trigger: GCGAGCCGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGGTTCTCTTGCCCAACTGCATGGCCTGAATGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp AGATGTGCAGGCACCTGCGTTCCATCCACAGGTTTGGGCCCCGGCTaGCCTGACGCACTGGGTGGACATGGGCCGGGTTTCCGTGACCCA +
Preference number: 1 (lower is better)
Translates to: RCAGTCVPSTGLGPG*PDALGGHGPGFRDP
Trigger: TGGGTCACGGAAACCCGGCCCATGTCCACCCAGTGCGTCAGGCCAGCCGGGGCCCAAACCTGTGGATGGAACGCAGGTGCCTGCACATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp CACAGTAAGCTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATaGCACGTGGCCACACCGCGTCAGCGCCGACTCCACGGTGGCTGC +
Preference number: 1 (lower is better)
Translates to: HSKLTPYSRTALASS*HVATPRQRRLHGGC
Trigger: GCAGCCACCGTGGAGTCGGCGCTGACGCGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCTTACTGTG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp ATGGGCCTGTCCACCGCCTTCTGGAAGGCCGCCACCCACTCCCTCTaGTCGGACTCCGTCTCGCAGGCAAACAGAAACTTGCGGTCGGGC +
Preference number: 1 (lower is better)
Translates to: MGLSTAFWKAATHSL*SDSVSQANRNLRSG
Trigger: GCCCGACCGCAAGTTTCTGTTTGCCTGCGAGACGGAGTCCGACCAGAGGGAGTGGGTGGCGGCCTTCCAGAAGGCGGTGGACAGGCCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR GCA 90 bp TCATGGCACGTGGCCACACCGCGTCAGCGCCGACTCCACGGTGGCTaGGTCACGGCTCACGTGCACTGTGAGGACACTGGGGTTGCTATA +
Preference number: 1 (lower is better)
Translates to: SWHVATPRQRRLHGG*VTAHVHCEDTGVAI
Trigger: TATAGCAACCCCAGTGTCCTCACAGTGCACGTGAGCCGTGACGCAGCCACCGTGGAGTCGGCGCTGACGCGGTGTGGCCACGTGCCATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp CTGCCAGGCTGTGCTGCGAACACGTGCCGGGGTCTCGGGCGGAGCTaGCTGGCACAGAAGACAGCTGGTGCGAGCCTAACTGCAAATGGA +
Preference number: 1 (lower is better)
Translates to: LPGCAANTCRGLGRS*LAQKTAGASLTANG
Trigger: TCCATTTGCAGTTAGGCTCGCACCAGCTGTCTTCTGTGCCAGCCAGCTCCGCCCGAGACCCCGGCACGTGTTCGCAGCACAGCCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 90 bp TCAGCGCCGACTCCACGGTGGCTGCGTCACGGCTCACGTGCACTGTaGGGACACTGGGGTTGCTATAGACAGTGCTGGGGCAACCCTGTG +
Preference number: 1 (lower is better)
Translates to: SAPTPRWLRHGSRAL*GHWGCYRQCWGNPV
Trigger: CACAGGGTTGCCCCAGCACTGTCTATAGCAACCCCAGTGTCCTCACAGTGCACGTGAGCCGTGACGCAGCCACCGTGGAGTCGGCGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 90 bp TTTCCTGTCTTTCCCACCTTTGGTCGACGGTCTTCCCCACACTCCTaGTGGGTCAGAGTGCGGTGCGAGCGGAGAGGCAGGCCCGACCCG +
Preference number: 1 (lower is better)
Translates to: FPVFPTFGRRSSPHS*WVRVRCERRGRPDP
Trigger: CGGGTCGGGCCTGCCTCTCCGCTCGCACCGCACTCTGACCCATCAGGAGTGTGGGGAAGACCGTCGACCAAAGGTGGGAAAGACAGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp CTCGAAGACAAGGGTCTTGCCCCACGCTCGCCTCCCTCCCAGCTTTaGCGGGAACGCCGTCCCACTCAGGGGTTCAATGCAGAAACACCC +
Preference number: 1 (lower is better)
Translates to: LEDKGLAPRSPPSQL*RERRPTQGFNAETP
Trigger: GGGTGTTTCTGCATTGAACCCCTGAGTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGAGGCGAGCGTGGGGCAAGACCCTTGTCTTCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp CACCATCCTCCACTGACCAGACAGGAGCCAGCCCCTTTCCGACAGTaGCTGGGAAGGAGACAGGTCTGGCTGAGGCCCCAGATGTGCAGG +
Preference number: 1 (lower is better)
Translates to: HHPPLTRQEPAPFRQ*LGRRQVWLRPQMCR
Trigger: CCTGCACATCTGGGGCCTCAGCCAGACCTGTCTCCTTCCCAGGCACTGTCGGAAAGGGGCTGGCTCCTGTCTGGTCAGTGGAGGATGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 90 bp CCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCCGTTCTGCTGTaGCATGACTGTCTCCTCGGAGGTCACTATGCATCTCAAGGGGAG +
Preference number: 1 (lower is better)
Translates to: PGGGCWVKGASAVLL*HDCLLGGHYASQGE
Trigger: CTCCCCTTGAGATGCATAGTGACCTCCGAGGAGACAGTCATGTCACAGCAGAACGGCAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp CCTGGAGAGCTTTGGCACCAGATCTGCGTCGCCGGCCCCTGGGAATaGCACCTGCAGGTAGTGGAAGCGAGCAGCTCGGAGTGCATTGAA +
Preference number: 1 (lower is better)
Translates to: PGELWHQICVAGPWE*HLQVVEASSSECIE
Trigger: TTCAATGCACTCCGAGCTGCTCGCTTCCACTACCTGCAGGTGGCATTCCCAGGGGCCGGCGACGCAGATCTGGTGCCAAAGCTCTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR CCA 90 bp CAGCCGAATCAGGTGGTAGAACCCATGGGTGCAGGGACACAGGGTTaGGCGGGCCCAGCCGCAATAGGTACTCAGTTCTGTGAGGAGGGG +
Preference number: 1 (lower is better)
Translates to: QPNQVVEPMGAGTQG*AGPAAIGTQFCEEG
Trigger: CCCCTCCTCACAGAACTGAGTACCTATTGCGGCTGGGCCCGCCCAACCCTGTGTCCCTGCACCCATGGGTTCTACCACCTGATTCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp TGTCTCCACTTCACAGTAAGCTCACGCCATATAGCCGCACTGCGTTaGCGAGCTCATGGCACGTGGCCACACCGCGTCAGCGCCGACTCC +
Preference number: 1 (lower is better)
Translates to: CLHFTVSSRHIAALR*RAHGTWPHRVSADS
Trigger: GGAGTCGGCGCTGACGCGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCTTACTGTGAAGTGGAGACA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 90 bp TTGGGATTACATTCAGGCCATGCAGTTGGGCAAGAGAACCAGAGGTaGTACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTG +
Preference number: 1 (lower is better)
Translates to: LGLHSGHAVGQENQR*YRALRDAPRSVRPV
Trigger: CACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGGTTCTCTTGCCCAACTGCATGGCCTGAATGTAATCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 90 bp CCTCACGGTACCCTGCCGAGTAGGGCTCCTGCTTCTCCGGGTAGATaGACTCCTGTCGCTCGTACTTGGCCCGGATCCACTGCTCTCGAA +
Preference number: 1 (lower is better)
Translates to: PHGTLPSRAPASPGR*TPVARTWPGSTALE
Trigger: TTCGAGAGCAGTGGATCCGGGCCAAGTACGAGCGACAGGAGTTCATCTACCCGGAGAAGCAGGAGCCCTACTCGGCAGGGTACCGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR GCA 90 bp TCCCTCCCAGCTTTGCCGGGAACGCCGTCCCACTCAGGGGTTCAATaGAGAAACACCCTCCTAAGGGAAAACGGGACGCCACTCCCTACC +
Preference number: 1 (lower is better)
Translates to: SLPALPGTPSHSGVQ*RNTLLRENGTPLPT
Trigger: GGTAGGGAGTGGCGTCCCGTTTTCCCTTAGGAGGGTGTTTCTGCATTGAACCCCTGAGTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp TCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCCGTTCTaGTGTGACATGACTGTCTCCTCGGAGGTCACTATGCATCTCAAG +
Preference number: 1 (lower is better)
Translates to: SLPAVAAGLRGPLPF*CDMTVSSEVTMHLK
Trigger: CTTGAGATGCATAGTGACCTCCGAGGAGACAGTCATGTCACAGCAGAACGGCAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp GCCACCACTGCAGGACAGAAACAGAGGGCCTTTGCTGCAGAGAACTaGAGATGGGCTGAGAAGCCTCAGCCACCCACAGGCAGAGGGACG +
Preference number: 1 (lower is better)
Translates to: ATTAGQKQRAFAAEN*RWAEKPQPPTGRGT
Trigger: CGTCCCTCTGCCTGTGGGTGGCTGAGGCTTCTCAGCCCATCTCCAGTTCTCTGCAGCAAAGGCCCTCTGTTTCTGTCCTGCAGTGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp GACTATCCGCGGCTTCGGCACCTGCTGGGGTCTCGGAGCACACCCTaGCCAGGTGAGGGCGATCACTCCGTTTCTCTATCCAGTTACCTT +
Preference number: 1 (lower is better)
Translates to: DYPRLRHLLGSRSTP*PGEGDHSVSLSSYL
Trigger: AAGGTAACTGGATAGAGAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAGCAGGTGCCGAAGCCGCGGATAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 90 bp GCGGCTTCGGCACCTGCTGGGGTCTCGGAGCACACCCTGGCCAGGTaGGGGCGATCACTCCGTTTCTCTATCCAGTTACCTTTGTACGTT +
Preference number: 1 (lower is better)
Translates to: AASAPAGVSEHTLAR*GRSLRFSIQLPLYV
Trigger: AACGTACAAAGGTAACTGGATAGAGAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAGCAGGTGCCGAAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp GAAAACGGGACGCCACTCCCTACCCAGGAGACGCCCCCACAGGGCTaGAGCTTCTATTCGAAGCCCATTTCTAAGGACACCACACGCAGG +
Preference number: 1 (lower is better)
Translates to: ENGTPLPTQETPPQG*SFYSKPISKDTTRR
Trigger: CCTGCGTGTGGTGTCCTTAGAAATGGGCTTCGAATAGAAGCTCCAGCCCTGTGGGGGCGTCTCCTGGGTAGGGAGTGGCGTCCCGTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp CAAGACCCTGAGTGCACGGGTCACTGCGTCCAGGCCCTCAAGAGCTaGGAAGCATTTGTGCACAGCCCCTCACAACAGTCCCCCTTACAC +
Preference number: 1 (lower is better)
Translates to: QDPECTGHCVQALKS*EAFVHSPSQQSPLH
Trigger: GTGTAAGGGGGACTGTTGTGAGGGGCTGTGCACAAATGCTTCCCAGCTCTTGAGGGCCTGGACGCAGTGACCCGTGCACTCAGGGTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp GCACGGGTCACTGCGTCCAGGCCCTCAAGAGCTGGGAAGCATTTGTaGACAGCCCCTCACAACAGTCCCCCTTACACACGGTTTCAGTTA +
Preference number: 1 (lower is better)
Translates to: ARVTASRPSRAGKHL*TAPHNSPPYTRFQL
Trigger: TAACTGAAACCGTGTGTAAGGGGGACTGTTGTGAGGGGCTGTGCACAAATGCTTCCCAGCTCTTGAGGGCCTGGACGCAGTGACCCGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp AGAGCACCCTCTCGTTCTGTCAGCACAAACTTCCGGCTCAAAAACTaGCCGTTGTCCCGGCCACGCTTCCAGAGAAAACCCTCACGGTAC +
Preference number: 1 (lower is better)
Translates to: RAPSRSVSTNFRLKN*PLSRPRFQRKPSRY
Trigger: GTACCGTGAGGGTTTTCTCTGGAAGCGTGGCCGGGACAACGGGCAGTTTTTGAGCCGGAAGTTTGTGCTGACAGAACGAGAGGGTGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR CCA 90 bp CTGATACCTTCTCTGGCCTGGCCCTGGTTCCTTTTGGTTACAGAATaGTATCAGGGCCAAGACCCTGAGTGCACGGGTCACTGCGTCCAG +
Preference number: 1 (lower is better)
Translates to: LIPSLAWPWFLLVTE*YQGQDPECTGHCVQ
Trigger: CTGGACGCAGTGACCCGTGCACTCAGGGTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGAAGGTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp GTGCCGGGGTCTCGGGCGGAGCTGGCTGGCACAGAAGACAGCTGGTaGGAGCCTAACTGCAAATGGACTCAGGTTCTTTTTCTGTTAAAA +
Preference number: 1 (lower is better)
Translates to: VPGSRAELAGTEDSW*EPNCKWTQVLFLLK
Trigger: TTTTAACAGAAAAAGAACCTGAGTCCATTTGCAGTTAGGCTCGCACCAGCTGTCTTCTGTGCCAGCCAGCTCCGCCCGAGACCCCGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp CCAGCTCCTCCTTCTGGATTTCTCGTTTGTAGTTTCCTGTGTCCCTaGCTGTCTCCACTTCACAGTAAGCTCACGCCATATAGCCGCACT +
Preference number: 1 (lower is better)
Translates to: PAPPSGFLVCSFLCP*LSPLHSKLTPYSRT
Trigger: AGTGCGGCTATATGGCGTGAGCTTACTGTGAAGTGGAGACAGGCAGGGACACAGGAAACTACAAACGAGAAATCCAGAAGGAGGAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp GTCACTATGCATCTCAAGGGGAGGTTTCTCAAGACAGCAGACACCTaGTTCACACCACACGTCACCACTCACTTCATGGCAACTGAGGGT +
Preference number: 1 (lower is better)
Translates to: VTMHLKGRFLKTADT*FTPHVTTHFMATEG
Trigger: ACCCTCAGTTGCCATGAAGTGAGTGGTGACGTGTGGTGTGAAGCAGGTGTCTGCTGTCTTGAGAAACCTCCCCTTGAGATGCATAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp TCAGCAGCCAGACCCAGAAACTCAAAGGCAGCGTTGGGAAGCCACTaGACGTTTGTAAGGAGTCAGGTTGTCCACACAATGGCGCTATTT +
Preference number: 1 (lower is better)
Translates to: SAARPRNSKAALGSH*TFVRSQVVHTMALF
Trigger: AAATAGCGCCATTGTGTGGACAACCTGACTCCTTACAAACGTGCAGTGGCTTCCCAACGCTGCCTTTGAGTTTCTGGGTCTGGCTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp GGCGCCCGGCCCGCTGAGGGTTGTAATCTGCACCTGTCACCAGTGTaGTTTCTGCAACAGCAGTTTCCTGTTCCCAAAATTTCTTCTATA +
Preference number: 1 (lower is better)
Translates to: GARPAEGCNLHLSPV*FLQQQFPVPKISSI
Trigger: TATAGAAGAAATTTTGGGAACAGGAAACTGCTGTTGCAGAAACCACACTGGTGACAGGTGCAGATTACAACCCTCAGCGGGCCGGGCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 90 bp GCATGGTCTGTTGTGTTCCCCTCACATCCTGGTTCATTTACTTTTTaGGCATGTGAAACCCTCTGCCATGACAGCCAGAACTCCACCCCC +
Preference number: 1 (lower is better)
Translates to: AWSVVFPSHPGSFTF*ACETLCHDSQNSTP
Trigger: GGGGGTGGAGTTCTGGCTGTCATGGCAGAGGGTTTCACATGCTCAAAAAGTAAATGAACCAGGATGTGAGGGGAACACAACAGACCATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 90 bp TGTCCACACAATGGCGCTATTTTGGGATTCCGGCTTCTCTGCCTGTaGCCTGCTGAAACCATTCATGCCGGCATCATGCCTATTGGAAAC +
Preference number: 1 (lower is better)
Translates to: CPHNGAILGFRLLCL*PAETIHAGIMPIGN
Trigger: GTTTCCAATAGGCATGATGCCGGCATGAATGGTTTCAGCAGGTCACAGGCAGAGAAGCCGGAATCCCAAAATAGCGCCATTGTGTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 90 bp CGGGCGGAGCTGGCTGGCACAGAAGACAGCTGGTGCGAGCCTAACTaGAAATGGACTCAGGTTCTTTTTCTGTTAAAATACAGGAGTTAC +
Preference number: 1 (lower is better)
Translates to: RAELAGTEDSWCEPN*KWTQVLFLLKYRSY
Trigger: GTAACTCCTGTATTTTAACAGAAAAAGAACCTGAGTCCATTTGCAGTTAGGCTCGCACCAGCTGTCTTCTGTGCCAGCCAGCTCCGCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp CCCGAAATATCTCGTGAGAAGCTCTGGCAGGAACAGCAGGGTGTCTaGATTCTTAAGCACAACACATTCAGCAGCCAGACCCAGAAACTC +
Preference number: 1 (lower is better)
Translates to: PEISREKLWQEQQGV*ILKHNTFSSQTQKL
Trigger: GAGTTTCTGGGTCTGGCTGCTGAATGTGTTGTGCTTAAGAATCCAGACACCCTGCTGTTCCTGCCAGAGCTTCTCACGAGATATTTCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp ATTCTTCACTCTCTAGCTCATCTGATACCTTCTCTGGCCTGGCCCTaGTTCCTTTTGGTTACAGAATGGTATCAGGGCCAAGACCCTGAG +
Preference number: 1 (lower is better)
Translates to: ILHSLAHLIPSLAWP*FLLVTEWYQGQDPE
Trigger: CTCAGGGTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGAAGGTATCAGATGAGCTAGAGAGTGAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp TGCACGTTTGTAAGGAGTCAGGTTGTCCACACAATGGCGCTATTTTaGGATTCCGGCTTCTCTGCCTGTGACCTGCTGAAACCATTCATG +
Preference number: 1 (lower is better)
Translates to: CTFVRSQVVHTMALF*DSGFSACDLLKPFM
Trigger: CATGAATGGTTTCAGCAGGTCACAGGCAGAGAAGCCGGAATCCCAAAATAGCGCCATTGTGTGGACAACCTGACTCCTTACAAACGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 90 bp CAATGGCGCTATTTTGGGATTCCGGCTTCTCTGCCTGTGACCTGCTaGAACCATTCATGCCGGCATCATGCCTATTGGAAACTCTTTGAA +
Preference number: 1 (lower is better)
Translates to: QWRYFGIPASLPVTC*NHSCRHHAYWKLFE
Trigger: TTCAAAGAGTTTCCAATAGGCATGATGCCGGCATGAATGGTTTCAGCAGGTCACAGGCAGAGAAGCCGGAATCCCAAAATAGCGCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 90 bp CACATGACAGATGATGAACTACCCGAAATATCTCGTGAGAAGCTCTaGCAGGAACAGCAGGGTGTCTGGATTCTTAAGCACAACACATTC +
Preference number: 1 (lower is better)
Translates to: HMTDDELPEISREKL*QEQQGVWILKHNTF
Trigger: GAATGTGTTGTGCTTAAGAATCCAGACACCCTGCTGTTCCTGCCAGAGCTTCTCACGAGATATTTCGGGTAGTTCATCATCTGTCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 90 bp GGGAGCCTTTTAATAATGTGGCCAGCTTATCATGACAAGCGTCTATaGGAAATAAAATGCATTCTGCACATGACAGATGATGAACTACCC +
Preference number: 1 (lower is better)
Translates to: GSLLIMWPAYHDKRL*EIKCILHMTDDELP
Trigger: GGGTAGTTCATCATCTGTCATGTGCAGAATGCATTTTATTTCTCATAGACGCTTGTCATGATAAGCTGGCCACATTATTAAAAGGCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 90 bp CTAGGGAATGGTAATTTTCTGATGATATCTGTGTTCAGAAGGGACTaGAATTTATACATTTACCTCTTTGAACTCAGAAAGTATCAGAGG +
Preference number: 1 (lower is better)
Translates to: LGNGNFLMISVFRRD*NLYIYLFELRKYQR
Trigger: CCTCTGATACTTTCTGAGTTCAAAGAGGTAAATGTATAAATTTCAGTCCCTTCTGAACACAGATATCATCAGAAAATTACCATTCCCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 90 bp TTAAATACCCAACTTTATAAATACGGTCTGATACAAACCAGAAAATaGCCCTTTGATTATGAAGCTACTTGGTGTTCAGGCAAAACCAGA +
Preference number: 1 (lower is better)
Translates to: LNTQLYKYGLIQTRK*PFDYEATWCSGKTR
Trigger: TCTGGTTTTGCCTGAACACCAAGTAGCTTCATAATCAAAGGGTCATTTTCTGGTTTGTATCAGACCGTATTTATAAAGTTGGGTATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 90 bp ATTCATGCCGGCATCATGCCTATTGGAAACTCTTTGAAGTTATTTTaGAACGAGAATCGACTCAATCTATTCCACTATAGTTTCATACAA +
Preference number: 1 (lower is better)
Translates to: IHAGIMPIGNSLKLF*NENRLNLFHYSFIQ
Trigger: TTGTATGAAACTATAGTGGAATAGATTGAGTCGATTCTCGTTTCAAAATAACTTCAAAGAGTTTCCAATAGGCATGATGCCGGCATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp TGCGGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCGACTCCACGGTGGCTaGGTCACGGCTCACGTGCAC +
Preference number: 2 (lower is better)
Translates to: CGLCGSLPAVAAGLRGPLRLHGG*VTAHVH
Trigger: GTGCACGTGAGCCGTGACGCAGCCACCGTGGAGTCG...CAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp CCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTGCGGCTCCCGGCGGTGGCTaGTGGGTTAAGGGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: PEVIPCPQGRPQVGAACAAPGGG*WVKGAS
Trigger: AGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGC...CGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp CCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTGCGCGGGTCAGAGTGCGATaGGAAGAGGCCCCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PEVIPCPQGRPQVGAACARVRVR*EEAPAW
Trigger: CCAGGCCGGGGCCTCTTCCCATCGCACTCTGACCCG...CGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp GGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCCGGAGCAGCCGTCCTGCTaGGACATCAACCCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: GLCGSLPAVAAGLRGPLPEQPSC*DINPPS
Trigger: GGAGGGAGGGTTGATGTCCCAGCAGGACGGCTGCTC...CGGCAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp GGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCCGACGCCCCCACAGGGCTaGAGCTTCTATTCGAAGCCC +
Preference number: 2 (lower is better)
Translates to: GLCGSLPAVAAGLRGPLPTPPQG*SFYSKP
Trigger: GGGCTTCGAATAGAAGCTCCAGCCCTGTGGGGGCGT...CGGCAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp AGAGAACCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGGGTCAGAGTGCGGTaGGAGCGGAGAGGCAGGCCC +
Preference number: 2 (lower is better)
Translates to: REPEVIPCPQGRPQVGAAWVRVR*ERRGRP
Trigger: GGGCCTGCCTCTCCGCTCGCACCGCACTCTGACCCA...GGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGGTTCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp CCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTGCGTCTCGGAGCACACCCTaGCCAGGTGAGGGCGATCAC +
Preference number: 2 (lower is better)
Translates to: PEVIPCPQGRPQVGAACASRSTP*PGEGDH
Trigger: GTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGA...CGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CAA 90 bp GAGGGACGAGGGCAGCCTGTTTCCCAGAGCCTGAGGTCGGCCAGATaGGTGGCCCCACCTGCCAGGGCTTGGAGACAGCCACTGCCAGGG +
Preference number: 2 (lower is better)
Translates to: EGRGQPVSQSLRSAR*VAPPARAWRQPLPG
Trigger: CCCTGGCAGTGGCTGTCTCCAAGCCCTGGCAGGTGGGGCCACCAATCTGGCCGACCTCAGGCTCTGGGAAACAGGCTGCCCTCGTCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp CACTGCGTTGGCGAGCTCATGGCACGTGGCCACACCGCGTCAGCGCCGACTCCACCTCCCTCCCAGCTTTaGCGGGAACGCCGTCCCACT +
Preference number: 2 (lower is better)
Translates to: HCVGELMARGHTASAPTPPPSQL*RERRPT
Trigger: AGTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGAGG...TGGAGTCGGCGCTGACGCGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR TCA 90 bp TTCCATCCACAGGTTTGGGCCCCGGCTGGCCTGACGCACTGGGTGGACATGGGCTTGGCACAGACGGGCTaGGAACTCCGCTCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: FHPQVWAPAGLTHWVDMGLAQTG*ELRSGP
Trigger: GGGCCCTGAGCGGAGTTCTCAGCCCGTCTGTGCCAA...GCCCATGTCCACCCAGTGCGTCAGGCCAGCCGGGGCCCAAACCTGTGGATGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR TCA 90 bp GTAAGCTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCAGGGCCCCGGCTGGCCTaGCGCACTGGGTGGACATGG +
Preference number: 2 (lower is better)
Translates to: VSSRHIAALRWRAHGTWPGPRLA*RTGWTW
Trigger: CCATGTCCACCCAGTGCGTCAGGCCAGCCGGGGCCC...TGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCTTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR TCA 90 bp GGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCCGAGGTACTCAGTTCTGTaGGGAGGGGAGGGACATGTT +
Preference number: 2 (lower is better)
Translates to: GLCGSLPAVAAGLRGPLPRYSVL*GGEGHV
Trigger: AACATGTCCCTCCCCTCCTCACAGAACTGAGTACCT...CGGCAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp CTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCACACCGGGTTTGGGCCCCGGCTaGCCTGACGCACTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: LTPYSRTALASSWHVATPGLGPG*PDALGG
Trigger: TCCACCCAGTGCGTCAGGCCAGCCGGGGCCCAAACC...CGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp CAGGGCTTGGAGACAGCCACTGCCAGGGTCGCCAGAGAGGACGTGACCTGGACCCGAAGACAAGGGTCTTaGCCCACGCTCGCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: QGLETATARVAREDVTWTRRQGS*PTLASL
Trigger: GAGGGAGGCGAGCGTGGGGCAAGACCCTTGTCTTCG...GGTCCAGGTCACGTCCTCTCTGGCGACCCTGGCAGTGGCTGTCTCCAAGCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp GAGCCGCTGCGCCCAGCCTGTTTATTTTCACGCTCACACTGCCCCAGGCTGGCCCCCCACCCCGTCTCCTaGCACCATCCTCCACTGACC +
Preference number: 2 (lower is better)
Translates to: EPLRPACLFSRSHCPRLAPHPVS*HHPPLT
Trigger: GGTCAGTGGAGGATGGTGGCAGGAGACGGGGTGGGG...GGCCAGCCTGGGGCAGTGTGAGCGTGAAAATAAACAGGCTGGGCGCAGCGGCTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp GGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCCGAGTTTCCTGTGTCCCTaGCTGTCTCCACTTCACAGT +
Preference number: 2 (lower is better)
Translates to: GLCGSLPAVAAGLRGPLPSFLCP*LSPLHS
Trigger: ACTGTGAAGTGGAGACAGGCAGGGACACAGGAAACT...CGGCAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp CAGGGCTTGGAGACAGCCACTGCCAGGGTCGCCAGAGAGGACGTGACCTGGACCGCCCCTTTCCGACAGTaGCTGGGAAGGAGACAGGTC +
Preference number: 2 (lower is better)
Translates to: QGLETATARVAREDVTWTAPFRQ*LGRRQV
Trigger: GACCTGTCTCCTTCCCAGGCACTGTCGGAAAGGGGC...GGTCCAGGTCACGTCCTCTCTGGCGACCCTGGCAGTGGCTGTCTCCAAGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp AGAGAACCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCGGGCCTCTGCCGTTCTaGTGTGACATGACTGTCTCC +
Preference number: 2 (lower is better)
Translates to: REPEVIPCPQGRPQVGAAGPLPF*CDMTVS
Trigger: GGAGACAGTCATGTCACAGCAGAACGGCAGAGGCCC...GGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGGTTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp ATGCTTGAAGTGCGCCTCCACTGCGTACTCCTGGGGCAGCATGGGCCTGTCCACTGCGTCGCCGGCCCCTaGGAATGCCACCTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: MLEVRLHCVLLGQHGPVHCVAGP*ECHLQV
Trigger: TACCTGCAGGTGGCATTCCCAGGGGCCGGCGACGCA...GTGGACAGGCCCATGCTGCCCCAGGAGTACGCAGTGGAGGCGCACTTCAAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR CCA 90 bp TCCAGCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGCACTCGCTAAGGTTGGCCAGTGGTGGCCCTaGGTGGACGGCGGGAACCCA +
Preference number: 2 (lower is better)
Translates to: SSHSESNVRGPPAALAKVGQWWP*VDGGNP
Trigger: TGGGTTCCCGCCGTCCACCCAGGGCCACCACTGGCC...AACCTTAGCGAGTGCGGCTGGAGGACCACGGACATTGGACTCACTGTGGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR CCA 90 bp ATGCTTGAAGTGCGCCTCCACTGCGTACTCCTGGGGCAGCATGGGCCTGTCCACATGCCATGTGGCCAGTaGTGGCCCTGGGTGGACGGC +
Preference number: 2 (lower is better)
Translates to: MLEVRLHCVLLGQHGPVHMPCGQ*WPWVDG
Trigger: GCCGTCCACCCAGGGCCACCACTGGCCACATGGCAT...GTGGACAGGCCCATGCTGCCCCAGGAGTACGCAGTGGAGGCGCACTTCAAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR CAA 90 bp CCTCGAAGACAAGGGTCTTGCCCCACGCTCGCCTCCCTCCCAGCTTaGCCGGGAACGCCGTCCCACTCAGGGGTTCAATGCAGAAACACC +
Preference number: 2 (lower is better)
Translates to: PRRQGSCPTLASLPA*PGTPSHSGVQCRNT
Trigger: GGTGTTTCTGCATTGAACCCCTGAGTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGAGGCGAGCGTGGGGCAAGACCCTTGTCTTCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR TCA 90 bp TCGCCTCCCTCCCAGCTTTGCCGGGAACGCCGTCCCACTCAGGGGTTCAATGCAGTCCTGAGAGACCACTaGACACGGCCCAGGGGTCTT +
Preference number: 2 (lower is better)
Translates to: SPPSQLCRERRPTQGFNAVLRDH*TRPRGL
Trigger: AAGACCCCTGGGCCGTGTTCAGTGGTCTCTCAGGAC...TGCATTGAACCCCTGAGTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGAGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR TCA 90 bp CTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCACACCGGAACTGGAGATGGGCTaGGAAGCCTCAGCCACCCAC +
Preference number: 2 (lower is better)
Translates to: LTPYSRTALASSWHVATPELEMG*EASATH
Trigger: GTGGGTGGCTGAGGCTTCTCAGCCCATCTCCAGTTC...CGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR TCA 90 bp GGTCCCCTCCGTCCAGCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGCACTCTCCTTGCTGCCAATaGAGACTTCCCCTCGGGCGA +
Preference number: 2 (lower is better)
Translates to: GPLRPATVSPMSVVLQPHSPCCQ*RLPLGR
Trigger: TCGCCCGAGGGGAAGTCTTCATTGGCAGCAAGGAGA...GTGCGGCTGGAGGACCACGGACATTGGACTCACTGTGGCTGGACGGAGGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR CCA 90 bp CTGGGGTCTCGGAGCACACCCTGGCCAGGTGAGGGCGATCACTCCGTTTCTCTAGGTCTCGGGCGGAGCTaGCTGGCACAGAAGACAGCT +
Preference number: 2 (lower is better)
Translates to: LGSRSTPWPGEGDHSVSLGLGRS*LAQKTA
Trigger: AGCTGTCTTCTGTGCCAGCCAGCTCCGCCCGAGACC...TAGAGAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp TGCGGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCACCTGTCACCAGTGTaGTTTCTGCAACAGCAGTTT +
Preference number: 2 (lower is better)
Translates to: CGLCGSLPAVAAGLRGPLHLSPV*FLQQQF
Trigger: AAACTGCTGTTGCAGAAACCACACTGGTGACAGGTG...CAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp ACCCTCACGGTACCCTGCCGAGTAGGGCTCCTGCTTCTCCGGGTAGATGAACTCTGCTCTCGAAGGAGCTaGCAGTCGGAGGGCGTGGGC +
Preference number: 2 (lower is better)
Translates to: TLTVPCRVGLLLLRVDELCSRRS*QSEGVG
Trigger: GCCCACGCCCTCCGACTGCCAGCTCCTTCGAGAGCA...GAGTTCATCTACCCGGAGAAGCAGGAGCCCTACTCGGCAGGGTACCGTGAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR CAA 90 bp CTGTCTCCACTTCACAGTAAGCTCACGCCATATAGCCGCACTGCGTaGGCGAGCTCATGGCACGTGGCCACACCGCGTCAGCGCCGACTC +
Preference number: 2 (lower is better)
Translates to: LSPLHSKLTPYSRTA*ASSWHVATPRQRRL
Trigger: GAGTCGGCGCTGACGCGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCTTACTGTGAAGTGGAGACAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CAA 90 bp ACCCACTCCCTCTGGTCGGACTCCGTCTCGCAGGCAAACAGAAACTaGCGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGGTGG +
Preference number: 2 (lower is better)
Translates to: THSLWSDSVSQANRN*RSGVTMVMPCGQWW
Trigger: CCACCACTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGCCTGCGAGACGGAGTCCGACCAGAGGGAGTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR TCA 90 bp TGCGGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCCATCTGTGACATTTTaGAGAGGGAAGCACGAAGTT +
Preference number: 2 (lower is better)
Translates to: CGLCGSLPAVAAGLRGPLPSVTF*RGKHEV
Trigger: AACTTCGTGCTTCCCTCTTCAAAATGTCACAGATGG...CAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR TCA 90 bp TCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGGTGGCCCTGGGTGGACGGCCAGCTCGGAGTGCATTaGACCAGTCCACAATCTCCT +
Preference number: 2 (lower is better)
Translates to: SGVTMVMPCGQWWPWVDGQLGVH*TSPQSP
Trigger: AGGAGATTGTGGACTGGTTCAATGCACTCCGAGCTG...GCCGTCCACCCAGGGCCACCACTGGCCACATGGCATCACCATCGTCACGCCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR GCA 90 bp AGAGAACCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCGCATGTGAAACCCTCTaGCATGACAGCCAGAACTCC +
Preference number: 2 (lower is better)
Translates to: REPEVIPCPQGRPQVGAAACETL*HDSQNS
Trigger: GGAGTTCTGGCTGTCATGGCAGAGGGTTTCACATGC...GGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGGTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp CTGGGGTCTCGGAGCACACCCTGGCCAGGTGAGGGCGATCACTCCGTTTCTCTAGGAGCTCCGTCGGCATaGTCTGTTGTGTTCCCCTCA +
Preference number: 2 (lower is better)
Translates to: LGSRSTPWPGEGDHSVSLGAPSA*SVVFPS
Trigger: TGAGGGGAACACAACAGACCATGCCGACGGAGCTCC...TAGAGAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp TCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGGTGGCCCTGGGTGGACGGCTCTTCATCACGGCCTTaGGCTCCTTGGCATCATTTC +
Preference number: 2 (lower is better)
Translates to: SGVTMVMPCGQWWPWVDGSSSRP*APWHHF
Trigger: GAAATGATGCCAAGGAGCCCAAGGCCGTGATGAAGA...GCCGTCCACCCAGGGCCACCACTGGCCACATGGCATCACCATCGTCACGCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR TCA 90 bp TCTCTGGCCTGGCCCTGGTTCCTTTTGGTTACAGAATGGTATCAGGGCCAAGACTCGCCAGAGAGGACGTaGCCTGGACCTCCCCACCCC +
Preference number: 2 (lower is better)
Translates to: SLAWPWFLLVTEWYQGQDSPERT*PGPPHP
Trigger: GGGGTGGGGAGGTCCAGGTCACGTCCTCTCTGGCGA...GTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp CCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTGCGAAAGTATCAGAGGACTaGAACATAAAACCGCCCCAT +
Preference number: 2 (lower is better)
Translates to: PEVIPCPQGRPQVGAACAKVSED*NIKPPH
Trigger: ATGGGGCGGTTTTATGTTGCAGTCCTCTGATACTTT...CGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp AGAGAACCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGGTGCGAGCCTAACTaGAAATGGACTCAGGTTCTT +
Preference number: 2 (lower is better)
Translates to: REPEVIPCPQGRPQVGAAWCEPN*KWTQVL
Trigger: AAGAACCTGAGTCCATTTGCAGTTAGGCTCGCACCA...GGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGGTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp TGGAAGGTGGCGTTCAGGTGCTCGATCTTCATCACGGCCTTGGGCTCCTTGGCATTCCGGCTCAAAAACTaGCCGTTGTCCCGGCCACGC +
Preference number: 2 (lower is better)
Translates to: WKVAFRCSIFITALGSLAFRLKN*PLSRPR
Trigger: GCGTGGCCGGGACAACGGGCAGTTTTTGAGCCGGAA...TGCCAAGGAGCCCAAGGCCGTGATGAAGATCGAGCACCTGAACGCCACCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR GCA 90 bp GCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGCACTCGCTAAGGTTTATGCTTTGGCACCAGATCTaGGTCGCCGGCCCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: ATVSPMSVVLQPHSLRFMLWHQI*VAGPWE
Trigger: TTCCCAGGGGCCGGCGACGCAGATCTGGTGCCAAAG...CATAAACCTTAGCGAGTGCGGCTGGAGGACCACGGACATTGGACTCACTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR CAA 90 bp CCCTCTCGTTCTGTCAGCACAAACTTCCGGCTCAAAAACTGCCCGTaGTCCCGGCCACGCTTCCAGAGAAAACCCTCACGGTACCCTGCC +
Preference number: 2 (lower is better)
Translates to: PSRSVSTNFRLKNCP*SRPRFQRKPSRYPA
Trigger: GGCAGGGTACCGTGAGGGTTTTCTCTGGAAGCGTGGCCGGGACAACGGGCAGTTTTTGAGCCGGAAGTTTGTGCTGACAGAACGAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR GCA 90 bp TCTCTGGCCTGGCCCTGGTTCCTTTTGGTTACAGAATGGTATCAGGGCCAAGACTCCGCTCAGGGCCCCTaGCAGGCTGTGCTGCGAACA +
Preference number: 2 (lower is better)
Translates to: SLAWPWFLLVTEWYQGQDSAQGP*QAVLRT
Trigger: TGTTCGCAGCACAGCCTGGCAGGGGCCCTGAGCGGA...GTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp AGCACCCTCTCGTTCTGTCAGCACAAACTTCCGGCTCAAAAACTGCCCGTTGTCGGCAGTCGGAGGGCGTaGGCCGGTAGTAGAAGGAGG +
Preference number: 2 (lower is better)
Translates to: STLSFCQHKLPAQKLPVVGSRRA*AGSRRR
Trigger: CCTCCTTCTACTACCGGCCCACGCCCTCCGACTGCC...GACAACGGGCAGTTTTTGAGCCGGAAGTTTGTGCTGACAGAACGAGAGGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR CCA 90 bp GCGTCCAGGGGGTCTTTGAAGTACATGAGCCTGCGGTCATCCATGGTGAACCAGTGGCCGGCTGGAAGGTaGCGTTCAGGTGCTCGATCT +
Preference number: 2 (lower is better)
Translates to: ASRGSLKYMSLRSSMVNQWPAGR*RSGARS
Trigger: AGATCGAGCACCTGAACGCCACCTTCCAGCCGGCCA...CTGGTTCACCATGGATGACCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR CCA 90 bp AAGGCGTCCAGGGGGTCTTTGAAGTACATGAGCCTGCGGTCATCCATGGTGAACCCGATCTTGGCCGGCTaGAAGGTGGCGTTCAGGTGC +
Preference number: 2 (lower is better)
Translates to: KASRGSLKYMSLRSSMVNPILAG*KVAFRC
Trigger: GCACCTGAACGCCACCTTCCAGCCGGCCAAGATCGG...GTTCACCATGGATGACCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR TCA 90 bp ATGCTTGAAGTGCGCCTCCACTGCGTACTCCTGGGGCAGCATGGGCCTGTCCACCGTCCTCATGGTAGATaGAGATGTTACGGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: MLEVRLHCVLLGQHGPVHRPHGR*RCYGCC
Trigger: ACAGCACCCGTAACATCTTCATCTACCATGAGGACG...GTGGACAGGCCCATGCTGCCCCAGGAGTACGCAGTGGAGGCGCACTTCAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR GCA 90 bp TCTCTGGCCTGGCCCTGGTTCCTTTTGGTTACAGAATGGTATCAGGGCCAAGACCCTGATGGGTCAGAGTaGGGTGCGAGCGGAGAGGCA +
Preference number: 2 (lower is better)
Translates to: SLAWPWFLLVTEWYQGQDPDGSE*GASGEA
Trigger: TGCCTCTCCGCTCGCACCGCACTCTGACCCATCAGG...GTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp CTGGGGTCTCGGAGCACACCCTGGCCAGGTGAGGGCGATCACTCCGTTTCTCTATTTGCTGCAGAGAACTaGAGATGGGCTGAGAAGCCT +
Preference number: 2 (lower is better)
Translates to: LGSRSTPWPGEGDHSVSLFAAEN*RWAEKP
Trigger: AGGCTTCTCAGCCCATCTCCAGTTCTCTGCAGCAAA...TAGAGAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CAA 90 bp TTAACCACGAAAGGGCCACCACTGCAGGACAGAAACAGAGGGCCTTaGCTGCAGAGAACTGGAGATGGGCTGAGAAGCCTCAGCCACCCA +
Preference number: 2 (lower is better)
Translates to: LTTKGPPLQDRNRGP*LQRTGDGLRSLSHP
Trigger: TGGGTGGCTGAGGCTTCTCAGCCCATCTCCAGTTCTCTGCAGCAAAGGCCCTCTGTTTCTGTCCTGCAGTGGTGGCCCTTTCGTGGTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR TCA 90 bp TCTCTGGCCTGGCCCTGGTTCCTTTTGGTTACAGAATGGTATCAGGGCCAAGACGCAGACACGGGACAGTaGCAGCTGCAGCCGAATCAG +
Preference number: 2 (lower is better)
Translates to: SLAWPWFLLVTEWYQGQDADTGQ*QLQPNQ
Trigger: CTGATTCGGCTGCAGCTGTCACTGTCCCGTGTCTGC...GTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR TCA 90 bp GCGTCCAGGGGGTCTTTGAAGTACATGAGCCTGCGGTCATCCATGGTGAACCAGGCTTCTCCGGGTAGATaGACTCCTGTCGCTCGTACT +
Preference number: 2 (lower is better)
Translates to: ASRGSLKYMSLRSSMVNQASPGR*TPVART
Trigger: AGTACGAGCGACAGGAGTTCATCTACCCGGAGAAGC...CTGGTTCACCATGGATGACCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR GCA 90 bp TCTCTGGCCTGGCCCTGGTTCCTTTTGGTTACAGAATGGTATCAGGGCCAAGACTCTGAGCAGCCGTCCTaGTGGGACATCAACCCTCCC +
Preference number: 2 (lower is better)
Translates to: SLAWPWFLLVTEWYQGQDSEQPS*WDINPP
Trigger: GGGAGGGTTGATGTCCCAGCAGGACGGCTGCTCAGA...GTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp GCAAACAGAAACTTGCGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGGGCGAGCAGCTCGGAGTaGATTGAACCAGTCCACAAT +
Preference number: 2 (lower is better)
Translates to: ANRNLRSGVTMVMPCGQWASSSE*IEPVHN
Trigger: ATTGTGGACTGGTTCAATGCACTCCGAGCTGCTCGC...CCACTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR TCA 90 bp TCTCTGGCCTGGCCCTGGTTCCTTTTGGTTACAGAATGGTATCAGGGCCAAGACGGCTCACGTGCACTGTaGGGACACTGGGGTTGCTAT +
Preference number: 2 (lower is better)
Translates to: SLAWPWFLLVTEWYQGQDGSRAL*GHWGCY
Trigger: ATAGCAACCCCAGTGTCCTCACAGTGCACGTGAGCC...GTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp GGGCCTCTGCCGTTCTGCTGTGACATGACTGTCTCCTCGGAGGTCACTATGCATAGATGTGCAGGCACCTaGGTTCCATCCACAGGTTTG +
Preference number: 2 (lower is better)
Translates to: GPLPFCCDMTVSSEVTMHRCAGT*VPSTGL
Trigger: CAAACCTGTGGATGGAACGCAGGTGCCTGCACATCT...ATGCATAGTGACCTCCGAGGAGACAGTCATGTCACAGCAGAACGGCAGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp GGGCCTCTGCCGTTCTGCTGTGACATGACTGTCTCCTCGGAGGTCACTATGCATTGCTATAGACAGTGCTaGGGCAACCCTGTGCCTACA +
Preference number: 2 (lower is better)
Translates to: GPLPFCCDMTVSSEVTMHCYRQC*GNPVPT
Trigger: TGTAGGCACAGGGTTGCCCCAGCACTGTCTATAGCA...ATGCATAGTGACCTCCGAGGAGACAGTCATGTCACAGCAGAACGGCAGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp GGCAAACAGAAACTTGCGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGCCTTCAGGTAGTTCCTaGAGAGCTTTGGCACCAGAT +
Preference number: 2 (lower is better)
Translates to: GKQKLAVGRDDGDAMWPVPSGSS*RALAPD
Trigger: ATCTGGTGCCAAAGCTCTCCAGGAACTACCTGAAGG...CACTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR TCA 90 bp GGGCCTCTGCCGTTCTGCTGTGACATGACTGTCTCCTCGGAGGTCACTATGCATCACAGTGCCCATCTGTaGCATTTTGAAGAGGGAAGC +
Preference number: 2 (lower is better)
Translates to: GPLPFCCDMTVSSEVTMHHSAHL*HFEEGS
Trigger: GCTTCCCTCTTCAAAATGTCACAGATGGGCACTGTG...ATGCATAGTGACCTCCGAGGAGACAGTCATGTCACAGCAGAACGGCAGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp CACACGGTTTCAGTTACCCATGGTCAGCCACAGTCCAAAAATACTAAGTGGAAAGACGGCGGGTCAGAGTaGGATGGGAAGAGGCCCCGG +
Preference number: 2 (lower is better)
Translates to: HTVSVTHGQPQSKNTKWKDGGSE*DGKRPR
Trigger: CCGGGGCCTCTTCCCATCGCACTCTGACCCGCCGTC...TTTCCACTTAGTATTTTTGGACTGTGGCTGACCATGGGTAACTGAAACCGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CAA 90 bp TCTCTAGCTCATCTGATACCTTCTCTGGCCTGGCCCTGGTTCCTTTaGGTTACAGAATGGTATCAGGGCCAAGACCCTGAGTGCACGGGT +
Preference number: 2 (lower is better)
Translates to: SLAHLIPSLAWPWFL*VTEWYQGQDPECTG
Trigger: ACCCGTGCACTCAGGGTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGAAGGTATCAGATGAGCTAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR GCA 90 bp CACACGGTTTCAGTTACCCATGGTCAGCCACAGTCCAAAAATACTAAGTGGAAACCTGCCAGGCTGTGCTaGGAACACGTGCCGGGGTCT +
Preference number: 2 (lower is better)
Translates to: HTVSVTHGQPQSKNTKWKPARLC*EHVPGS
Trigger: AGACCCCGGCACGTGTTCGCAGCACAGCCTGGCAGG...TTTCCACTTAGTATTTTTGGACTGTGGCTGACCATGGGTAACTGAAACCGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp GACTGTCTCCTCGGAGGTCACTATGCATCTCAAGGGGAGGTTTCTCAAGACAGCTGTCTTTCCCACCTTTaGTCGACGGTCTTCCCCACA +
Preference number: 2 (lower is better)
Translates to: DCLLGGHYASQGEVSQDSCLSHL*STVFPT
Trigger: TGTGGGGAAGACCGTCGACCAAAGGTGGGAAAGACA...GCTGTCTTGAGAAACCTCCCCTTGAGATGCATAGTGACCTCCGAGGAGACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CAA 90 bp AGCACAACACATTCAGCAGCCAGACCCAGAAACTCAAAGGCAGCGTaGGGAAGCCACTGCACGTTTGTAAGGAGTCAGGTTGTCCACACA +
Preference number: 2 (lower is better)
Translates to: STTHSAARPRNSKAA*GSHCTFVRSQVVHT
Trigger: TGTGTGGACAACCTGACTCCTTACAAACGTGCAGTGGCTTCCCAACGCTGCCTTTGAGTTTCTGGGTCTGGCTGCTGAATGTGTTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR TCA 90 bp GGCAAACAGAAACTTGCGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGTGGCATCATTTCTGTTaGAATACTTCAGAGCACCCT +
Preference number: 2 (lower is better)
Translates to: GKQKLAVGRDDGDAMWPVWHHFC*NTSEHP
Trigger: AGGGTGCTCTGAAGTATTTCAACAGAAATGATGCCA...CACTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR GCA 90 bp TCTCTGGCCTGGCCCTGGTTCCTTTTGGTTACAGAATGGTATCAGGGCCAAGACCACTCAGGGGTTCAATaGAGAAACACCCTCCTAAGG +
Preference number: 2 (lower is better)
Translates to: SLAWPWFLLVTEWYQGQDHSGVQ*RNTLLR
Trigger: CCTTAGGAGGGTGTTTCTGCATTGAACCCCTGAGTG...GTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CCA 90 bp GACTGTCTCCTCGGAGGTCACTATGCATCTCAAGGGGAGGTTTCTCAAGACAGCATACCTTCTCTGGCCTaGCCCTGGTTCCTTTTGGTT +
Preference number: 2 (lower is better)
Translates to: DCLLGGHYASQGEVSQDSIPSLA*PWFLLV
Trigger: AACCAAAAGGAACCAGGGCCAGGCCAGAGAAGGTAT...GCTGTCTTGAGAAACCTCCCCTTGAGATGCATAGTGACCTCCGAGGAGACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp GGGCCTGGGCACTCCCGACGGCGGGTCAGAGTGCGATaGGAAGAGGCCCCGGCCTGGGCCCGGGAGCTCCGT +
Preference number: 3 (lower is better)
Translates to: GPGHSRRRVRVR*EEAPAWARELR
Trigger: ACGGAGCTCCCGGGCCCAGGCCGGGGCCTCTTCCCATCGCACTCTGACCCGCCGTCGGGAGTGCCCAGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp GTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTaGGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGG +
Preference number: 3 (lower is better)
Translates to: VPSGTPPGRCGL*GSLPAVAAGLR
Trigger: CCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp GGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTaGGGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCT +
Preference number: 3 (lower is better)
Translates to: GDTVPSGTPPGR*GLCGSLPAVAA
Trigger: AGCAGCCACCGCCGGGAGCGAGCCGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp TGCGGTGCGAGCGGAGAGGCAGGCCCGACCCGGGCCTaGGCACTCCCGACGGCGGGTCAGAGTGCGATGGGA +
Preference number: 3 (lower is better)
Translates to: CGASGEAGPTRA*ALPTAGQSAMG
Trigger: TCCCATCGCACTCTGACCCGCCGTCGGGAGTGCCCAGGCCCGGGTCGGGCCTGCCTCTCCGCTCGCACCGCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp CGCTCAGGGCCCCTGCCAGGCTGTGCTGCGAACACGTaGCGGGGTCTCGGGCGGAGCTGGCTGGCACAGAAG +
Preference number: 3 (lower is better)
Translates to: RSGPLPGCAANT*RGLGRSWLAQK
Trigger: CTTCTGTGCCAGCCAGCTCCGCCCGAGACCCCGGCACGTGTTCGCAGCACAGCCTGGCAGGGGCCCTGAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp GGGCTGAGAACTCCGCTCAGGGCCCCTGCCAGGCTGTaGTGCGAACACGTGCCGGGGTCTCGGGCGGAGCTG +
Preference number: 3 (lower is better)
Translates to: GLRTPLRAPARL*CEHVPGSRAEL
Trigger: CAGCTCCGCCCGAGACCCCGGCACGTGTTCGCAGCACAGCCTGGCAGGGGCCCTGAGCGGAGTTCTCAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp GTCGACGGTCTTCCCCACACTCCTGATGGGTCAGAGTaGGGTGCGAGCGGAGAGGCAGGCCCGACCCGGGCC +
Preference number: 3 (lower is better)
Translates to: VDGLPHTPDGSE*GASGEAGPTRA
Trigger: GGCCCGGGTCGGGCCTGCCTCTCCGCTCGCACCGCACTCTGACCCATCAGGAGTGTGGGGAAGACCGTCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp CGGCGGGTCAGAGTGCGATGGGAAGAGGCCCCGGCCTaGGCCCGGGAGCTCCGTCGGCATGGTCTGTTGTGT +
Preference number: 3 (lower is better)
Translates to: RRVRVRWEEAPA*ARELRRHGLLC
Trigger: ACACAACAGACCATGCCGACGGAGCTCCCGGGCCCAGGCCGGGGCCTCTTCCCATCGCACTCTGACCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CAA 90 bp TTCCATCCACAGGTTTGGGCCCCGGCTGGCCTGACGCACTGGGTGGACATGGGCGCCTCCCTCCCAGCTTaGCCGGGAACGCCGTCCCAC +
Preference number: 3 (lower is better)
Translates to: FHPQVWAPAGLTHWVDMGASLPA*PGTPSH
Trigger: GTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGAGGC...GCCCATGTCCACCCAGTGCGTCAGGCCAGCCGGGGCCCAAACCTGTGGATGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp TGGCACAGACGGGCTGAGAACTCCGCTCAGGGCCCCTaGCAGGCTGTGCTGCGAACACGTGCCGGGGTCTCG +
Preference number: 3 (lower is better)
Translates to: WHRRAENSAQGP*QAVLRTRAGVS
Trigger: CGAGACCCCGGCACGTGTTCGCAGCACAGCCTGGCAGGGGCCCTGAGCGGAGTTCTCAGCCCGTCTGTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp GTGGCCACACCGCGTCAGCGCCGACTCCACGGTGGCTaGGTCACGGCTCACGTGCACTGTGAGGACACTGGG +
Preference number: 3 (lower is better)
Translates to: VATPRQRRLHGG*VTAHVHCEDTG
Trigger: CCCAGTGTCCTCACAGTGCACGTGAGCCGTGACGCAGCCACCGTGGAGTCGGCGCTGACGCGGTGTGGCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp CGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGTaGTGGCCCTGGGTGGACGGCGGGAACCCATGCAGC +
Preference number: 3 (lower is better)
Translates to: RSGVTMVMPCGQ*WPWVDGGNPCS
Trigger: GCTGCATGGGTTCCCGCCGTCCACCCAGGGCCACCACTGGCCACATGGCATCACCATCGTCACGCCCGACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR CCA 72 bp GGCACCTGCGTTCCATCCACAGGTTTGGGCCCCGGCTaGCCTGACGCACTGGGTGGACATGGGCCGGGTTTC +
Preference number: 3 (lower is better)
Translates to: GTCVPSTGLGPG*PDALGGHGPGF
Trigger: GAAACCCGGCCCATGTCCACCCAGTGCGTCAGGCCAGCCGGGGCCCAAACCTGTGGATGGAACGCAGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp ACAGGATTCGGGACTATCCGCGGCTTCGGCACCTGCTaGGGTCTCGGAGCACACCCTGGCCAGGTGAGGGCG +
Preference number: 3 (lower is better)
Translates to: TGFGTIRGFGTC*GLGAHPGQVRA
Trigger: CGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAGCAGGTGCCGAAGCCGCGGATAGTCCCGAATCCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp TACTCCTGGGGCAGCATGGGCCTGTCCACCGCCTTCTaGAAGGCCGCCACCCACTCCCTCTGGTCGGACTCC +
Preference number: 3 (lower is better)
Translates to: YSWGSMGLSTAF*KAATHSLWSDS
Trigger: GGAGTCCGACCAGAGGGAGTGGGTGGCGGCCTTCCAGAAGGCGGTGGACAGGCCCATGCTGCCCCAGGAGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR CAA 90 bp CCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTGCGCTGTCTTTCCCACCTTaGGTCGACGGTCTTCCCCAC +
Preference number: 3 (lower is better)
Translates to: PEVIPCPQGRPQVGAACALSFPP*VDGLPH
Trigger: GTGGGGAAGACCGTCGACCAAAGGTGGGAAAGACAG...CGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp CATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTaGCCACACCGCGTCAGCGCCGACTCCACGGTGGCT +
Preference number: 3 (lower is better)
Translates to: HIAALRWRAHGT*PHRVSADSTVA
Trigger: AGCCACCGTGGAGTCGGCGCTGACGCGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp CTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATaGCACGTGGCCACACCGCGTCAGCGCCGACTCCAC +
Preference number: 3 (lower is better)
Translates to: LTPYSRTALASS*HVATPRQRRLH
Trigger: GTGGAGTCGGCGCTGACGCGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp GGCCGTGGGGGTGGCCGATCTTGGCCGGCTGGAAGGTaGCGTTCAGGTGCTCGATCTTCATCACGGCCTTGG +
Preference number: 3 (lower is better)
Translates to: GRGGGRSWPAGR*RSGARSSSRPW
Trigger: CCAAGGCCGTGATGAAGATCGAGCACCTGAACGCCACCTTCCAGCCGGCCAAGATCGGCCACCCCCACGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR CCA 72 bp AAACTTGCGGTCGGGCGTGACGATGGTGATGCCATGTaGCCAGTGGTGGCCCTGGGTGGACGGCGGGAACCC +
Preference number: 3 (lower is better)
Translates to: KLAVGRDDGDAM*PVVALGGRREP
Trigger: GGGTTCCCGCCGTCCACCCAGGGCCACCACTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR CAA 90 bp CAGGGCTTGGAGACAGCCACTGCCAGGGTCGCCAGAGAGGACGTGACCTGGACCTCGAAGACAAGGGTCTaGCCCCACGCTCGCCTCCCT +
Preference number: 3 (lower is better)
Translates to: QGLETATARVAREDVTWTSKTRV*PHARLP
Trigger: AGGGAGGCGAGCGTGGGGCAAGACCCTTGTCTTCGA...GGTCCAGGTCACGTCCTCTCTGGCGACCCTGGCAGTGGCTGTCTCCAAGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp AAGGGTCTTGCCCCACGCTCGCCTCCCTCCCAGCTTTaGCGGGAACGCCGTCCCACTCAGGGGTTCAATGCA +
Preference number: 3 (lower is better)
Translates to: KGLAPRSPPSQL*RERRPTQGFNA
Trigger: TGCATTGAACCCCTGAGTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGAGGCGAGCGTGGGGCAAGACCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp CTTTGGCACCAGATCTGCGTCGCCGGCCCCTGGGAATaGCACCTGCAGGTAGTGGAAGCGAGCAGCTCGGAG +
Preference number: 3 (lower is better)
Translates to: LWHQICVAGPWE*HLQVVEASSSE
Trigger: CTCCGAGCTGCTCGCTTCCACTACCTGCAGGTGGCATTCCCAGGGGCCGGCGACGCAGATCTGGTGCCAAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR CCA 72 bp TGTGCTGCGAACACGTGCCGGGGTCTCGGGCGGAGCTaGCTGGCACAGAAGACAGCTGGTGCGAGCCTAACT +
Preference number: 3 (lower is better)
Translates to: CAANTCRGLGRS*LAQKTAGASLT
Trigger: AGTTAGGCTCGCACCAGCTGTCTTCTGTGCCAGCCAGCTCCGCCCGAGACCCCGGCACGTGTTCGCAGCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp CCAGATGTGCAGGCACCTGCGTTCCATCCACAGGTTTaGGCCCCGGCTGGCCTGACGCACTGGGTGGACATG +
Preference number: 3 (lower is better)
Translates to: PDVQAPAFHPQV*APAGLTHWVDM
Trigger: CATGTCCACCCAGTGCGTCAGGCCAGCCGGGGCCCAAACCTGTGGATGGAACGCAGGTGCCTGCACATCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp CGGCTTCGGCACCTGCTGGGGTCTCGGAGCACACCCTaGCCAGGTGAGGGCGATCACTCCGTTTCTCTATCC +
Preference number: 3 (lower is better)
Translates to: RLRHLLGSRSTP*PGEGDHSVSLS
Trigger: GGATAGAGAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAGCAGGTGCCGAAGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp GGAGAGCTTTGGCACCAGATCTGCGTCGCCGGCCCCTaGGAATGCCACCTGCAGGTAGTGGAAGCGAGCAGC +
Preference number: 3 (lower is better)
Translates to: GELWHQICVAGP*ECHLQVVEASS
Trigger: GCTGCTCGCTTCCACTACCTGCAGGTGGCATTCCCAGGGGCCGGCGACGCAGATCTGGTGCCAAAGCTCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR-3UTR CAA 90 bp CAGGCAAACAGAAACTTGCGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGGGGGTGGCCGATCTaGGCCGGCTGGAAGGTGGCG +
Preference number: 3 (lower is better)
Translates to: QANRNLRSGVTMVMPCGQWGWPI*AGWKVA
Trigger: CGCCACCTTCCAGCCGGCCAAGATCGGCCACCCCCA...CTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR TCA 72 bp TTCCGTGACCCACAGGCAACTTTGGCACAGACGGGCTaGGAACTCCGCTCAGGGCCCCTGCCAGGCTGTGCT +
Preference number: 3 (lower is better)
Translates to: FRDPQATLAQTG*ELRSGPLPGCA
Trigger: AGCACAGCCTGGCAGGGGCCCTGAGCGGAGTTCTCAGCCCGTCTGTGCCAAAGTTGCCTGTGGGTCACGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp CTGGGAAGGAGACAGGTCTGGCTGAGGCCCCAGATGTaGAGGCACCTGCGTTCCATCCACAGGTTTGGGCCC +
Preference number: 3 (lower is better)
Translates to: LGRRQVWLRPQM*RHLRSIHRFGP
Trigger: GGGCCCAAACCTGTGGATGGAACGCAGGTGCCTGCACATCTGGGGCCTCAGCCAGACCTGTCTCCTTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp ATGAACTCCTGTCGCTCGTACTTGGCCCGGATCCACTaGTCTCGAAGGAGCTGGCAGTCGGAGGGCGTGGGC +
Preference number: 3 (lower is better)
Translates to: MNSCRSYLARIH*SRRSWQSEGVG
Trigger: GCCCACGCCCTCCGACTGCCAGCTCCTTCGAGAGCAGTGGATCCGGGCCAAGTACGAGCGACAGGAGTTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR CCA 72 bp AGAGGCCCCGGCCTGGGCCCGGGAGCTCCGTCGGCATaGTCTGTTGTGTTCCCCTCACATCCTGGTTCATTT +
Preference number: 3 (lower is better)
Translates to: RGPGLGPGAPSA*SVVFPSHPGSF
Trigger: AAATGAACCAGGATGTGAGGGGAACACAACAGACCATGCCGACGGAGCTCCCGGGCCCAGGCCGGGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 72 bp ACTCCACGGTGGCTGCGTCACGGCTCACGTGCACTGTaGGGACACTGGGGTTGCTATAGACAGTGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: TPRWLRHGSRAL*GHWGCYRQCWG
Trigger: GCCCCAGCACTGTCTATAGCAACCCCAGTGTCCTCACAGTGCACGTGAGCCGTGACGCAGCCACCGTGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 72 bp TTTCCCACCTTTGGTCGACGGTCTTCCCCACACTCCTaGTGGGTCAGAGTGCGGTGCGAGCGGAGAGGCAGG +
Preference number: 3 (lower is better)
Translates to: FPTFGRRSSPHS*WVRVRCERRGR
Trigger: CCTGCCTCTCCGCTCGCACCGCACTCTGACCCATCAGGAGTGTGGGGAAGACCGTCGACCAAAGGTGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 72 bp CATTCAGGCCATGCAGTTGGGCAAGAGAACCAGAGGTaGTACCGTGCCCTCAGGGACGCCCCCAGGTCGGTG +
Preference number: 3 (lower is better)
Translates to: HSGHAVGQENQR*YRALRDAPRSV
Trigger: CACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGGTTCTCTTGCCCAACTGCATGGCCTGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 72 bp CATGCAGCACCGTGTAGCCACTCTCCTTGCTGCCAATaGAGACTTCCCCTCGGGCGAAGGCGTCCAGGGGGT +
Preference number: 3 (lower is better)
Translates to: HAAPCSHSPCCQ*RLPLGRRRPGG
Trigger: ACCCCCTGGACGCCTTCGCCCGAGGGGAAGTCTTCATTGGCAGCAAGGAGAGTGGCTACACGGTGCTGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR GCA 72 bp TGGCCGATCTTGGCCGGCTGGAAGGTGGCGTTCAGGTaGTCGATCTTCATCACGGCCTTGGGCTCCTTGGCA +
Preference number: 3 (lower is better)
Translates to: WPILAGWKVAFR*SIFITALGSLA
Trigger: TGCCAAGGAGCCCAAGGCCGTGATGAAGATCGAGCACCTGAACGCCACCTTCCAGCCGGCCAAGATCGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR CCA 72 bp TCCACCGCCTTCTGGAAGGCCGCCACCCACTCCCTCTaGTCGGACTCCGTCTCGCAGGCAAACAGAAACTTG +
Preference number: 3 (lower is better)
Translates to: STAFWKAATHSL*SDSVSQANRNL
Trigger: CAAGTTTCTGTTTGCCTGCGAGACGGAGTCCGACCAGAGGGAGTGGGTGGCGGCCTTCCAGAAGGCGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR TCA 72 bp GCACCTGCTGGGGTCTCGGAGCACACCCTGGCCAGGTaGGGGCGATCACTCCGTTTCTCTATCCAGTTACCT +
Preference number: 3 (lower is better)
Translates to: APAGVSEHTLAR*GRSLRFSIQLP
Trigger: AGGTAACTGGATAGAGAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAGCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 72 bp ACCCTGCCGAGTAGGGCTCCTGCTTCTCCGGGTAGATaGACTCCTGTCGCTCGTACTTGGCCCGGATCCACT +
Preference number: 3 (lower is better)
Translates to: TLPSRAPASPGR*TPVARTWPGST
Trigger: AGTGGATCCGGGCCAAGTACGAGCGACAGGAGTTCATCTACCCGGAGAAGCAGGAGCCCTACTCGGCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR GCA 72 bp GCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCCGTTCTaGTGTGACATGACTGTCTCCTCGGAGGTCACTATG +
Preference number: 3 (lower is better)
Translates to: AVAAGLRGPLPF*CDMTVSSEVTM
Trigger: CATAGTGACCTCCGAGGAGACAGTCATGTCACAGCAGAACGGCAGAGGCCCCCTTAACCCAGCAGCCACCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp TTCACAGTAAGCTCACGCCATATAGCCGCACTGCGTTaGCGAGCTCATGGCACGTGGCCACACCGCGTCAGC +
Preference number: 3 (lower is better)
Translates to: FTVSSRHIAALR*RAHGTWPHRVS
Trigger: GCTGACGCGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCTTACTGTGAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp GAGTGCACGGGTCACTGCGTCCAGGCCCTCAAGAGCTaGGAAGCATTTGTGCACAGCCCCTCACAACAGTCC +
Preference number: 3 (lower is better)
Translates to: ECTGHCVQALKS*EAFVHSPSQQS
Trigger: GGACTGTTGTGAGGGGCTGTGCACAAATGCTTCCCAGCTCTTGAGGGCCTGGACGCAGTGACCCGTGCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp GCTTTGCCGGGAACGCCGTCCCACTCAGGGGTTCAATaGAGAAACACCCTCCTAAGGGAAAACGGGACGCCA +
Preference number: 3 (lower is better)
Translates to: ALPGTPSHSGVQ*RNTLLRENGTP
Trigger: TGGCGTCCCGTTTTCCCTTAGGAGGGTGTTTCTGCATTGAACCCCTGAGTGGGACGGCGTTCCCGGCAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp ACTGCGTCCAGGCCCTCAAGAGCTGGGAAGCATTTGTaGACAGCCCCTCACAACAGTCCCCCTTACACACGG +
Preference number: 3 (lower is better)
Translates to: TASRPSRAGKHL*TAPHNSPPYTR
Trigger: CCGTGTGTAAGGGGGACTGTTGTGAGGGGCTGTGCACAAATGCTTCCCAGCTCTTGAGGGCCTGGACGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp ACGCCACTCCCTACCCAGGAGACGCCCCCACAGGGCTaGAGCTTCTATTCGAAGCCCATTTCTAAGGACACC +
Preference number: 3 (lower is better)
Translates to: TPLPTQETPPQG*SFYSKPISKDT
Trigger: GGTGTCCTTAGAAATGGGCTTCGAATAGAAGCTCCAGCCCTGTGGGGGCGTCTCCTGGGTAGGGAGTGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp GCAGGACAGAAACAGAGGGCCTTTGCTGCAGAGAACTaGAGATGGGCTGAGAAGCCTCAGCCACCCACAGGC +
Preference number: 3 (lower is better)
Translates to: AGQKQRAFAAEN*RWAEKPQPPTG
Trigger: GCCTGTGGGTGGCTGAGGCTTCTCAGCCCATCTCCAGTTCTCTGCAGCAAAGGCCCTCTGTTTCTGTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CAA 90 bp GCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGCACTCGCTAAGGTTTATGTCCTGTCGCTCGTACTaGGCCCGGATCCACTGCTCT +
Preference number: 3 (lower is better)
Translates to: ATVSPMSVVLQPHSLRFMSCRSY*ARIHCS
Trigger: AGAGCAGTGGATCCGGGCCAAGTACGAGCGACAGGA...CATAAACCTTAGCGAGTGCGGCTGGAGGACCACGGACATTGGACTCACTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR TCA 72 bp GGCTGCTGGGTTAAGGGGGCCTCTGCCGTTCTGCTGTaGCATGACTGTCTCCTCGGAGGTCACTATGCATCT +
Preference number: 3 (lower is better)
Translates to: GCWVKGASAVLL*HDCLLGGHYAS
Trigger: AGATGCATAGTGACCTCCGAGGAGACAGTCATGTCACAGCAGAACGGCAGAGGCCCCCTTAACCCAGCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 72 bp CCTGCAGGTAGTGGAAGCGAGCAGCTCGGAGTGCATTaGACCAGTCCACAATCTCCTTCCCGTCCTCATGGT +
Preference number: 3 (lower is better)
Translates to: PAGSGSEQLGVH*TSPQSPSRPHG
Trigger: ACCATGAGGACGGGAAGGAGATTGTGGACTGGTTCAATGCACTCCGAGCTGCTCGCTTCCACTACCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR CCA 72 bp TCTCTGGCCTGGCCCTGGTTCCTTTTGGTTACAGAATaGTATCAGGGCCAAGACCCTGAGTGCACGGGTCAC +
Preference number: 3 (lower is better)
Translates to: SLAWPWFLLVTE*YQGQDPECTGH
Trigger: GTGACCCGTGCACTCAGGGTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp TCTCGTTCTGTCAGCACAAACTTCCGGCTCAAAAACTaGCCGTTGTCCCGGCCACGCTTCCAGAGAAAACCC +
Preference number: 3 (lower is better)
Translates to: SRSVSTNFRLKN*PLSRPRFQRKP
Trigger: GGGTTTTCTCTGGAAGCGTGGCCGGGACAACGGGCAGTTTTTGAGCCGGAAGTTTGTGCTGACAGAACGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR TCA 72 bp AATGGCGCTATTTTGGGATTCCGGCTTCTCTGCCTGTaGCCTGCTGAAACCATTCATGCCGGCATCATGCCT +
Preference number: 3 (lower is better)
Translates to: NGAILGFRLLCL*PAETIHAGIMP
Trigger: AGGCATGATGCCGGCATGAATGGTTTCAGCAGGTCACAGGCAGAGAAGCCGGAATCCCAAAATAGCGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp CATCTCAAGGGGAGGTTTCTCAAGACAGCAGACACCTaGTTCACACCACACGTCACCACTCACTTCATGGCA +
Preference number: 3 (lower is better)
Translates to: HLKGRFLKTADT*FTPHVTTHFMA
Trigger: TGCCATGAAGTGAGTGGTGACGTGTGGTGTGAAGCAGGTGTCTGCTGTCTTGAGAAACCTCCCCTTGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp AGGCTCCTCGGTTTGGGTCTGTGTCTGTTGTCTCCTTaGGATTACATTCAGGCCATGCAGTTGGGCAAGAGA +
Preference number: 3 (lower is better)
Translates to: RLLGLGLCLLSP*DYIQAMQLGKR
Trigger: TCTCTTGCCCAACTGCATGGCCTGAATGTAATCCCAAGGAGACAACAGACACAGACCCAAACCGAGGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 72 bp ACCAGTCCACAATCTCCTTCCCGTCCTCATGGTAGATaGAGATGTTACGGGTGCTGTTGTCCTTCAGGTAGG +
Preference number: 3 (lower is better)
Translates to: TSPQSPSRPHGR*RCYGCCCPSGR
Trigger: CCTACCTGAAGGACAACAGCACCCGTAACATCTTCATCTACCATGAGGACGGGAAGGAGATTGTGGACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR GCA 72 bp AGACCCAGAAACTCAAAGGCAGCGTTGGGAAGCCACTaGACGTTTGTAAGGAGTCAGGTTGTCCACACAATG +
Preference number: 3 (lower is better)
Translates to: RPRNSKAALGSH*TFVRSQVVHTM
Trigger: CATTGTGTGGACAACCTGACTCCTTACAAACGTGCAGTGGCTTCCCAACGCTGCCTTTGAGTTTCTGGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp GTAAGGAGTCAGGTTGTCCACACAATGGCGCTATTTTaGGATTCCGGCTTCTCTGCCTGTGACCTGCTGAAA +
Preference number: 3 (lower is better)
Translates to: VRSQVVHTMALF*DSGFSACDLLK
Trigger: TTTCAGCAGGTCACAGGCAGAGAAGCCGGAATCCCAAAATAGCGCCATTGTGTGGACAACCTGACTCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp TCTCTAGCTCATCTGATACCTTCTCTGGCCTGGCCCTaGTTCCTTTTGGTTACAGAATGGTATCAGGGCCAA +
Preference number: 3 (lower is better)
Translates to: SLAHLIPSLAWP*FLLVTEWYQGQ
Trigger: TTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGAAGGTATCAGATGAGCTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 72 bp CCAAGCGCTTCCTTTAAGGGAAAAGGTGGAAACTCCTaGCCTATAAGAAAAACAGCCAGATGCCGAGGTTGC +
Preference number: 3 (lower is better)
Translates to: PSASFKGKGGNS*PIRKTARCRGC
Trigger: GCAACCTCGGCATCTGGCTGTTTTTCTTATAGGTCAGGAGTTTCCACCTTTTCCCTTAAAGGAAGCGCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CCA 72 bp GATGATGAACTACCCGAAATATCTCGTGAGAAGCTCTaGCAGGAACAGCAGGGTGTCTGGATTCTTAAGCAC +
Preference number: 3 (lower is better)
Translates to: DDELPEISREKL*QEQQGVWILKH
Trigger: GTGCTTAAGAATCCAGACACCCTGCTGTTCCTGCCAGAGCTTCTCACGAGATATTTCGGGTAGTTCATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR-3UTR CAA 90 bp TCTCTGGCCTGGCCCTGGTTCCTTTTGGTTACAGAATGGTATCAGGGCCAAGACCCAGAAAATGACCCTTaGATTATGAAGCTACTTGGT +
Preference number: 3 (lower is better)
Translates to: SLAWPWFLLVTEWYQGQDPENDP*IMKLLG
Trigger: ACCAAGTAGCTTCATAATCAAAGGGTCATTTTCTGG...GTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 72 bp TCTCCGGTAAGAACACAGTGCCCATCTGTGACATTTTaGAGAGGGAAGCACGAAGTTCTGTCAGTTTTGCTG +
Preference number: 3 (lower is better)
Translates to: SPVRTQCPSVTF*RGKHEVLSVLL
Trigger: CAGCAAAACTGACAGAACTTCGTGCTTCCCTCTTCAAAATGTCACAGATGGGCACTGTGTTCTTACCGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR GCA 72 bp CTGGCTGGCACAGAAGACAGCTGGTGCGAGCCTAACTaGAAATGGACTCAGGTTCTTTTTCTGTTAAAATAC +
Preference number: 3 (lower is better)
Translates to: LAGTEDSWCEPN*KWTQVLFLLKY
Trigger: GTATTTTAACAGAAAAAGAACCTGAGTCCATTTGCAGTTAGGCTCGCACCAGCTGTCTTCTGTGCCAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 72 bp GTGGAAAATTCCAGAAATAAACCATTCATGAGTTTTTaGTTCTGTGCTGTTCTGAGCAGCCGTCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: VENSRNKPFMSF*FCAVLSSRPAG
Trigger: CCCAGCAGGACGGCTGCTCAGAACAGCACAGAATCAAAAACTCATGAATGGTTTATTTCTGGAATTTTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 72 bp CTTTGGGAGCCTTTTAATAATGTGGCCAGCTTATCATaGCAAGCGTCTATGAGAAATAAAATGCATTCTGCA +
Preference number: 3 (lower is better)
Translates to: LWEPFNNVASLS*QASMRNKMHSA
Trigger: TGCAGAATGCATTTTATTTCTCATAGACGCTTGTCATGATAAGCTGGCCACATTATTAAAAGGCTCCCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 72 bp CAACTTTATAAATACGGTCTGATACAAACCAGAAAATaGCCCTTTGATTATGAAGCTACTTGGTGTTCAGGC +
Preference number: 3 (lower is better)
Translates to: QLYKYGLIQTRK*PFDYEATWCSG
Trigger: GCCTGAACACCAAGTAGCTTCATAATCAAAGGGTCATTTTCTGGTTTGTATCAGACCGTATTTATAAAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR TCA 72 bp TTAATAATGTGGCCAGCTTATCATGACAAGCGTCTATaGGAAATAAAATGCATTCTGCACATGACAGATGAT +
Preference number: 3 (lower is better)
Translates to: LIMWPAYHDKRL*EIKCILHMTDD
Trigger: ATCATCTGTCATGTGCAGAATGCATTTTATTTCTCATAGACGCTTGTCATGATAAGCTGGCCACATTATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp GGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCCGGCGTTGGCGAGCTCATaGCACGTGGCCACACCGCGT +
Preference number: 4 (lower is better)
Translates to: GLCGSLPAVAAGLRGPLPALASS*HVATPR
Trigger: ACGCGGTGTGGCCACGTGCCATGAGCTCGCCAACGC...CGGCAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCCGCGAAGACAAGGGTCTTaGCCCACGCTCGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GLCGSLPAVAAGLRGPLPRRQGS*PTLASL
Trigger: GAGGGAGGCGAGCGTGGGGCAAGACCCTTGTCTTCG...CGGCAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCCGGCTCGCGGCCGGCTATaGCCATCAGTTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLCGSLPAVAAGLRGPLPARGRL*PSVPAP
Trigger: AGGAGCTGGAACTGATGGGCATAGCCGGCCGCGAGC...CGGCAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp CCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTGCGGGCGACTCCGGAGTCTaGGAGCGCCTTGCGAGCGTA +
Preference number: 4 (lower is better)
Translates to: PEVIPCPQGRPQVGAACAGDSGV*ERLASV
Trigger: TACGCTCGCAAGGCGCTCGCAGACTCCGGAGTCGCC...CGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp AGAGAACCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCGCGCCGACTCCACGGTaGCTGCGTCACGGCTCACGT +
Preference number: 4 (lower is better)
Translates to: REPEVIPCPQGRPQVGAAAPTPR*LRHGSR
Trigger: ACGTGAGCCGTGACGCAGCCACCGTGGAGTCGGCGC...GGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGGTTCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp CCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTGCGGTCCTGAGAGACCACTaGACACGGCCCAGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: PEVIPCPQGRPQVGAACAVLRDH*TRPRGL
Trigger: AAGACCCCTGGGCCGTGTTCAGTGGTCTCTCAGGAC...CGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp TTGCCCCACGCTCGCCTCCCTCCCAGCTTTGCCGGGAACGCCGTCCCACTCAGGTGGGCCGGGTTTCCGTaGCCCACAGGCAACTTTGGC +
Preference number: 4 (lower is better)
Translates to: LPHARLPPSFAGNAVPLRWAGFP*PTGNFG
Trigger: GCCAAAGTTGCCTGTGGGTCACGGAAACCCGGCCCA...CCTGAGTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGAGGCGAGCGTGGGGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp TTCCATCCACAGGTTTGGGCCCCGGCTGGCCTGACGCACTGGGTGGACATGGGCGACGGCGGGTCAGAGTaGGATGGGAAGAGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: FHPQVWAPAGLTHWVDMGDGGSE*DGKRPR
Trigger: CCGGGGCCTCTTCCCATCGCACTCTGACCCGCCGTC...GCCCATGTCCACCCAGTGCGTCAGGCCAGCCGGGGCCCAAACCTGTGGATGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp TGCGGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGGGAGCTCCGTCGGCATaGTCTGTTGTGTTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: CGLCGSLPAVAAGLRGPLGAPSA*SVVFPS
Trigger: TGAGGGGAACACAACAGACCATGCCGACGGAGCTCC...CAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp GAGCCGCTGCGCCCAGCCTGTTTATTTTCACGCTCACACTGCCCCAGGCTGGCCCCCGGCGGTGGCTGCTaGGTTAAGGGGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: EPLRPACLFSRSHCPRLAPGGGC*VKGASA
Trigger: GGCAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGG...GGCCAGCCTGGGGCAGTGTGAGCGTGAAAATAAACAGGCTGGGCGCAGCGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp TTCTGGAAGGCCGCCACCCACTCCCTCTGGTCGGACTCCGTCTCGCAGGCAAACCCATGTGGCCAGTGGTaGCCCTGGGTGGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: FWKAATHSLWSDSVSQANPCGQW*PWVDGG
Trigger: CCCGCCGTCCACCCAGGGCCACCACTGGCCACATGG...GTTTGCCTGCGAGACGGAGTCCGACCAGAGGGAGTGGGTGGCGGCCTTCCAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR TCA 90 bp TCCCAGAGCCTGAGGTCGGCCAGATTGGTGGCCCCACCTGCCAGGGCTTGGAGAGCCACCATCCTCCACTaGCCAGACAGGAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SQSLRSARLVAPPARAWRATILH*PDRSQP
Trigger: GGGCTGGCTCCTGTCTGGTCAGTGGAGGATGGTGGC...TCTCCAAGCCCTGGCAGGTGGGGCCACCAATCTGGCCGACCTCAGGCTCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp CCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTGCGGGCTCACGTGCACTGTaGGGACACTGGGGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: PEVIPCPQGRPQVGAACAGSRAL*GHWGCY
Trigger: ATAGCAACCCCAGTGTCCTCACAGTGCACGTGAGCC...CGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp ACCCTCCTAAGGGAAAACGGGACGCCACTCCCTACCCAGGAGACGCCCCCACAGTGTGCTGCGAACACGTaGCGGGGTCTCGGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: TLLRENGTPLPTQETPPQCAANT*RGLGRS
Trigger: GCTCCGCCCGAGACCCCGGCACGTGTTCGCAGCACA...CTGTGGGGGCGTCTCCTGGGTAGGGAGTGGCGTCCCGTTTTCCCTTAGGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp AGAGAACCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCATTGGTGGCCCCACCTaGCAGGGCTTGGAGACAGCC +
Preference number: 4 (lower is better)
Translates to: REPEVIPCPQGRPQVGAAIGGPT*QGLETA
Trigger: GGCTGTCTCCAAGCCCTGGCAGGTGGGGCCACCAAT...GGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGGTTCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCCGGCATGTGAAACCCTCTaGCATGACAGCCAGAACTCC +
Preference number: 4 (lower is better)
Translates to: GLCGSLPAVAAGLRGPLPACETL*HDSQNS
Trigger: GGAGTTCTGGCTGTCATGGCAGAGGGTTTCACATGC...CGGCAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp TCGCCTCCCTCCCAGCTTTGCCGGGAACGCCGTCCCACTCAGGGGTTCAATGCATGGGTCAGAGTGCGGTaGGAGCGGAGAGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SPPSQLCRERRPTQGFNAWVRVR*ERRGRP
Trigger: GGGCCTGCCTCTCCGCTCGCACCGCACTCTGACCCA...TGCATTGAACCCCTGAGTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGAGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp ACCCTCCTAAGGGAAAACGGGACGCCACTCCCTACCCAGGAGACGCCCCCACAGGCTCCCGGCGGTGGCTaGTGGGTTAAGGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TLLRENGTPLPTQETPPQAPGGG*WVKGAS
Trigger: AGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGC...CTGTGGGGGCGTCTCCTGGGTAGGGAGTGGCGTCCCGTTTTCCCTTAGGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp GGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCCGGGCACAGAAGACAGCTaGTGCGAGCCTAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: GLCGSLPAVAAGLRGPLPGTEDS*CEPNCK
Trigger: TTTGCAGTTAGGCTCGCACCAGCTGTCTTCTGTGCC...CGGCAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp ACCCTCCTAAGGGAAAACGGGACGCCACTCCCTACCCAGGAGACGCCCCCACAGGGTTTGGGCCCCGGCTaGCCTGACGCACTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: TLLRENGTPLPTQETPPQGLGPG*PDALGG
Trigger: TCCACCCAGTGCGTCAGGCCAGCCGGGGCCCAAACC...CTGTGGGGGCGTCTCCTGGGTAGGGAGTGGCGTCCCGTTTTCCCTTAGGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp TTCCATCCACAGGTTTGGGCCCCGGCTGGCCTGACGCACTGGGTGGACATGGGCGGTCGGCCAGATTGGTaGCCCCACCTGCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: FHPQVWAPAGLTHWVDMGGRPDW*PHLPGL
Trigger: AAGCCCTGGCAGGTGGGGCCACCAATCTGGCCGACC...GCCCATGTCCACCCAGTGCGTCAGGCCAGCCGGGGCCCAAACCTGTGGATGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp GAGCCGCTGCGCCCAGCCTGTTTATTTTCACGCTCACACTGCCCCAGGCTGGCCCGGGTCAGAGTGCGATaGGAAGAGGCCCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EPLRPACLFSRSHCPRLARVRVR*EEAPAW
Trigger: CCAGGCCGGGGCCTCTTCCCATCGCACTCTGACCCG...GGCCAGCCTGGGGCAGTGTGAGCGTGAAAATAAACAGGCTGGGCGCAGCGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CACGGGTCCCCTCCGTCCAGCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCAGTGGTGGCCCTGGGTaGACGGCGGGAACCCATGCA +
Preference number: 4 (lower is better)
Translates to: HGSPPSSHSESNVRGPPASGGPG*TAGTHA
Trigger: TGCATGGGTTCCCGCCGTCCACCCAGGGCCACCACT...GGCTGGAGGACCACGGACATTGGACTCACTGTGGCTGGACGGAGGGGACCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp GGTCCCCTCCGTCCAGCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGCACATGCCATGTGGCCAGTaGTGGCCCTGGGTGGACGGC +
Preference number: 4 (lower is better)
Translates to: GPLRPATVSPMSVVLQPHMPCGQ*WPWVDG
Trigger: GCCGTCCACCCAGGGCCACCACTGGCCACATGGCAT...GTGCGGCTGGAGGACCACGGACATTGGACTCACTGTGGCTGGACGGAGGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR CAA 72 bp CAAGGGTCTTGCCCCACGCTCGCCTCCCTCCCAGCTTaGCCGGGAACGCCGTCCCACTCAGGGGTTCAATGC +
Preference number: 4 (lower is better)
Translates to: QGSCPTLASLPA*PGTPSHSGVQC
Trigger: GCATTGAACCCCTGAGTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGAGGCGAGCGTGGGGCAAGACCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp TCCCAGAGCCTGAGGTCGGCCAGATTGGTGGCCCCACCTGCCAGGGCTTGGAGACACACCCTGGCCAGGTaGGGGCGATCACTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: SQSLRSARLVAPPARAWRHTLAR*GRSLRF
Trigger: GAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTG...TCTCCAAGCCCTGGCAGGTGGGGCCACCAATCTGGCCGACCTCAGGCTCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GTAAGCTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCAGATCCAGCGGGAAGCTaGCCTTGTCCGGGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: VSSRHIAALRWRAHGTWPDPAGS*PCPGAA
Trigger: CGCGGCCCCCGGACAAGGGCAGCTTCCCGCTGGATC...TGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCTTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp CTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCACACCGCCTCCCTCCCAGCTTTaGCGGGAACGCCGTCCCACT +
Preference number: 4 (lower is better)
Translates to: LTPYSRTALASSWHVATPPPSQL*RERRPT
Trigger: AGTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGAGG...CGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp TCGCCTCCCTCCCAGCTTTGCCGGGAACGCCGTCCCACTCAGGGGTTCAATGCACCTGCCAGGCTGTGCTaGGAACACGTGCCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SPPSQLCRERRPTQGFNAPARLC*EHVPGS
Trigger: AGACCCCGGCACGTGTTCGCAGCACAGCCTGGCAGG...TGCATTGAACCCCTGAGTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGAGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GTAAGCTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCAGCCCCTGCCAGGCTGTaGTGCGAACACGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: VSSRHIAALRWRAHGTWPAPARL*CEHVPG
Trigger: CCCCGGCACGTGTTCGCAGCACAGCCTGGCAGGGGC...TGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCTTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp TCCCAGAGCCTGAGGTCGGCCAGATTGGTGGCCCCACCTGCCAGGGCTTGGAGAGAGTGCACGGGTCACTaGGTCCAGGCCCTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: SQSLRSARLVAPPARAWRECTGH*VQALKS
Trigger: GCTCTTGAGGGCCTGGACGCAGTGACCCGTGCACTC...TCTCCAAGCCCTGGCAGGTGGGGCCACCAATCTGGCCGACCTCAGGCTCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp CACTGCGTTGGCGAGCTCATGGCACGTGGCCACACCGCGTCAGCGCCGACTCCAAGGGTCCGGCTCTGTTaGTCAGGCTGGAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: HCVGELMARGHTASAPTPRVRLC*SGWRAV
Trigger: CACTGCTCTCCAGCCTGAGCAACAGAGCCGGACCCT...TGGAGTCGGCGCTGACGCGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CAGGGCTTGGAGACAGCCACTGCCAGGGTCGCCAGAGAGGACGTGACCTGGACCTTCCATCCACAGGTTTaGGCCCCGGCTGGCCTGACG +
Preference number: 4 (lower is better)
Translates to: QGLETATARVAREDVTWTFHPQV*APAGLT
Trigger: CGTCAGGCCAGCCGGGGCCCAAACCTGTGGATGGAA...GGTCCAGGTCACGTCCTCTCTGGCGACCCTGGCAGTGGCTGTCTCCAAGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp AGAGAACCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCATAGCCGCACTGCGTTaGCGAGCTCATGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: REPEVIPCPQGRPQVGAAIAALR*RAHGTW
Trigger: CCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTAT...GGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGGTTCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTGCGCAGGCCCTCAAGAGCTaGGAAGCATTTGTGCACAGC +
Preference number: 4 (lower is better)
Translates to: PEVIPCPQGRPQVGAACAQALKS*EAFVHS
Trigger: GCTGTGCACAAATGCTTCCCAGCTCTTGAGGGCCTG...CGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CAGGGCTTGGAGACAGCCACTGCCAGGGTCGCCAGAGAGGACGTGACCTGGACCCACACTGCCCCAGGCTaGCCACCGTATGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: QGLETATARVAREDVTWTHTAPG*PPYAPS
Trigger: GGAAGGAGCATACGGTGGCCAGCCTGGGGCAGTGTG...GGTCCAGGTCACGTCCTCTCTGGCGACCCTGGCAGTGGCTGTCTCCAAGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CGTACTCCTGGGGCAGCATGGGCCTGTCCACCGCCTTCTGGAAGGCCGCCACCCCTTTGGACTCAAACCTaGCTCTCGCGGCGTCGTTCC +
Preference number: 4 (lower is better)
Translates to: RTPGAAWACPPPSGRPPPLWTQT*LSRRRS
Trigger: GGAACGACGCCGCGAGAGCCAGGTTTGAGTCCAAAG...GGGTGGCGGCCTTCCAGAAGGCGGTGGACAGGCCCATGCTGCCCCAGGAGTACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp CCACTGCTCTCGAAGGAGCTGGCAGTCGGAGGGCGTGGGCCGGTAGTAGAAGGAGCCACCCACTCCCTCTaGTCGGACTCCGTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: PLLSKELAVGGRGPVVEGATHSL*SDSVSQ
Trigger: CTGCGAGACGGAGTCCGACCAGAGGGAGTGGGTGGC...TCCTTCTACTACCGGCCCACGCCCTCCGACTGCCAGCTCCTTCGAGAGCAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR CAA 72 bp CCCAGATGTGCAGGCACCTGCGTTCCATCCACAGGTTaGGGCCCCGGCTGGCCTGACGCACTGGGTGGACAT +
Preference number: 4 (lower is better)
Translates to: PRCAGTCVPSTG*GPGWPDALGGH
Trigger: ATGTCCACCCAGTGCGTCAGGCCAGCCGGGGCCCAAACCTGTGGATGGAACGCAGGTGCCTGCACATCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp CTGACAGAGAGCAGACACGGGACAGTGACAGCTGCAGCCGAATCAGGTGGTAGAGGGCCCCGGCTGGCCTaGCGCACTGGGTGGACATGG +
Preference number: 4 (lower is better)
Translates to: LTESRHGTVTAAAESGGRGPRLA*RTGWTW
Trigger: CCATGTCCACCCAGTGCGTCAGGCCAGCCGGGGCCC...TCTACCACCTGATTCGGCTGCAGCTGTCACTGTCCCGTGTCTGCTCTCTGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp TCCCAGAGCCTGAGGTCGGCCAGATTGGTGGCCCCACCTGCCAGGGCTTGGAGAGAACTGGAGATGGGCTaGGAAGCCTCAGCCACCCAC +
Preference number: 4 (lower is better)
Translates to: SQSLRSARLVAPPARAWRELEMG*EASATH
Trigger: GTGGGTGGCTGAGGCTTCTCAGCCCATCTCCAGTTC...TCTCCAAGCCCTGGCAGGTGGGGCCACCAATCTGGCCGACCTCAGGCTCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp TGCGGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGACCCGAAATATCTCGTaGGAAGCTCTGGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: CGLCGSLPAVAAGLRGPLTRNIS*EALAGT
Trigger: TGTTCCTGCCAGAGCTTCTCACGAGATATTTCGGGT...CAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp TCCAGCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGCACTCGCTAAGGTTGATCCAGCGGGAAGCTaGCCTTGTCCGGGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: SSHSESNVRGPPAALAKVDPAGS*PCPGAA
Trigger: CGCGGCCCCCGGACAAGGGCAGCTTCCCGCTGGATC...AACCTTAGCGAGTGCGGCTGGAGGACCACGGACATTGGACTCACTGTGGCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR GCA 90 bp ACCCTCCTAAGGGAAAACGGGACGCCACTCCCTACCCAGGAGACGCCCCCACAGCCTGATGGGTCAGAGTaGGGTGCGAGCGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: TLLRENGTPLPTQETPPQPDGSE*GASGEA
Trigger: TGCCTCTCCGCTCGCACCGCACTCTGACCCATCAGG...CTGTGGGGGCGTCTCCTGGGTAGGGAGTGGCGTCCCGTTTTCCCTTAGGAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GGTCCCCTCCGTCCAGCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGCACTTCCGGCTCAAAAACTaGCCGTTGTCCCGGCCACGC +
Preference number: 4 (lower is better)
Translates to: GPLRPATVSPMSVVLQPHFRLKN*PLSRPR
Trigger: GCGTGGCCGGGACAACGGGCAGTTTTTGAGCCGGAA...GTGCGGCTGGAGGACCACGGACATTGGACTCACTGTGGCTGGACGGAGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp CCCGTTGTCCCGGCCACGCTTCCAGAGAAAACCCTCACGGTACCCTGCCGAGTATCCGGGGGCCGCGGCTaGAAGCTCTTGGTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: PVVPATLPEKTLTVPCRVSGGRG*KLLVPK
Trigger: TTTCGGGACCAAGAGCTTCCAGCCGCGGCCCCCGGA...TACTCGGCAGGGTACCGTGAGGGTTTTCTCTGGAAGCGTGGCCGGGACAACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp CTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCACACCGGGTCTCGGGCGGAGCTaGCTGGCACAGAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: LTPYSRTALASSWHVATPGLGRS*LAQKTA
Trigger: AGCTGTCTTCTGTGCCAGCCAGCTCCGCCCGAGACC...CGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp GTAAGCTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCACGAGCTCATGGCACGTaGCCACACCGCGTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: VSSRHIAALRWRAHGTWPRAHGT*PHRVSA
Trigger: GGCGCTGACGCGGTGTGGCCACGTGCCATGAGCTCG...TGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCTTAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp GGCAAACAGAAACTTGCGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGGGCCAGTGGTGGCCCTaGGTGGACGGCGGGAACCCA +
Preference number: 4 (lower is better)
Translates to: GKQKLAVGRDDGDAMWPVGQWWP*VDGGNP
Trigger: TGGGTTCCCGCCGTCCACCCAGGGCCACCACTGGCC...CACTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR TCA 90 bp ATGCTTGAAGTGCGCCTCCACTGCGTACTCCTGGGGCAGCATGGGCCTGTCCACTCCCGTGGGAGGCCATaGACTCCACTTGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: MLEVRLHCVLLGQHGPVHSRGRP*TPLGPP
Trigger: AGGAGGCCCAAGTGGAGTTCATGGCCTCCCACGGGA...GTGGACAGGCCCATGCTGCCCCAGGAGTACGCAGTGGAGGCGCACTTCAAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR GCA 90 bp GTAAGCTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCATCCGCTCAGGGCCCCTaGCAGGCTGTGCTGCGAACA +
Preference number: 4 (lower is better)
Translates to: VSSRHIAALRWRAHGTWPSAQGP*QAVLRT
Trigger: TGTTCGCAGCACAGCCTGGCAGGGGCCCTGAGCGGA...TGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp CTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCACACCGCTTGGAGACAGCCACTaGCAGGGTCGCCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LTPYSRTALASSWHVATPLGDSH*QGRQRG
Trigger: TCCTCTCTGGCGACCCTGGCAGTGGCTGTCTCCAAG...CGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GAGCCGCTGCGCCCAGCCTGTTTATTTTCACGCTCACACTGCCCCAGGCTGGCCGGTAGAACCCATGGGTaGAGGGACACAGGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: EPLRPACLFSRSHCPRLAGRTHG*RDTGLG
Trigger: GCCCAACCCTGTGTCCCTGCACCCATGGGTTCTACC...GGCCAGCCTGGGGCAGTGTGAGCGTGAAAATAAACAGGCTGGGCGCAGCGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GAGCCGCTGCGCCCAGCCTGTTTATTTTCACGCTCACACTGCCCCAGGCTGGCCTCTGAGCAGCCGTCCTaGTGGGACATCAACCCTCCC +
Preference number: 4 (lower is better)
Translates to: EPLRPACLFSRSHCPRLASEQPS*WDINPP
Trigger: GGGAGGGTTGATGTCCCAGCAGGACGGCTGCTCAGA...GGCCAGCCTGGGGCAGTGTGAGCGTGAAAATAAACAGGCTGGGCGCAGCGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp TTCCATCCACAGGTTTGGGCCCCGGCTGGCCTGACGCACTGGGTGGACATGGGCGGGCCTCTGCCGTTCTaGTGTGACATGACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: FHPQVWAPAGLTHWVDMGGPLPF*CDMTVS
Trigger: GGAGACAGTCATGTCACAGCAGAACGGCAGAGGCCC...GCCCATGTCCACCCAGTGCGTCAGGCCAGCCGGGGCCCAAACCTGTGGATGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp TCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGGTGGCCCTGGGTGGACGGCAAGGTGGCGTTCAGGTaGTCGATCTTCATCACGGCC +
Preference number: 4 (lower is better)
Translates to: SGVTMVMPCGQWWPWVDGKVAFR*SIFITA
Trigger: GGCCGTGATGAAGATCGAGCACCTGAACGCCACCTT...GCCGTCCACCCAGGGCCACCACTGGCCACATGGCATCACCATCGTCACGCCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR GCA 90 bp ATGCTTGAAGTGCGCCTCCACTGCGTACTCCTGGGGCAGCATGGGCCTGTCCACCTTTGGCACCAGATCTaGGTCGCCGGCCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: MLEVRLHCVLLGQHGPVHLWHQI*VAGPWE
Trigger: TTCCCAGGGGCCGGCGACGCAGATCTGGTGCCAAAG...GTGGACAGGCCCATGCTGCCCCAGGAGTACGCAGTGGAGGCGCACTTCAAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp CTGGGGTCTCGGAGCACACCCTGGCCAGGTGAGGGCGATCACTCCGTTTCTCTATCTCGGAGCACACCCTaGCCAGGTGAGGGCGATCAC +
Preference number: 4 (lower is better)
Translates to: LGSRSTPWPGEGDHSVSLSRSTP*PGEGDH
Trigger: GTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGA...TAGAGAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CACGGGTCCCCTCCGTCCAGCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGTTCCTGGAGAGCTTTaGCACCAGATCTGCGTCGCC +
Preference number: 4 (lower is better)
Translates to: HGSPPSSHSESNVRGPPAVPGEL*HQICVA
Trigger: GGCGACGCAGATCTGGTGCCAAAGCTCTCCAGGAAC...GGCTGGAGGACCACGGACATTGGACTCACTGTGGCTGGACGGAGGGGACCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp CTTCCTTCAGGTAGTTCCTGGAGAGCTTTGGCACCAGATCTGCGTCGCCGGCCCCTGTCCACCGCCTTCTaGAAGGCCGCCACCCACTCC +
Preference number: 4 (lower is better)
Translates to: LPSGSSWRALAPDLRRRPLSTAF*KAATHS
Trigger: GGAGTGGGTGGCGGCCTTCCAGAAGGCGGTGGACAG...GGGCCGGCGACGCAGATCTGGTGCCAAAGCTCTCCAGGAACTACCTGAAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR TCA 90 bp GGGCCTCTGCCGTTCTGCTGTGACATGACTGTCTCCTCGGAGGTCACTATGCATTCGCCAGAGAGGACGTaGCCTGGACCTCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: GPLPFCCDMTVSSEVTMHSPERT*PGPPHP
Trigger: GGGGTGGGGAGGTCCAGGTCACGTCCTCTCTGGCGA...ATGCATAGTGACCTCCGAGGAGACAGTCATGTCACAGCAGAACGGCAGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp CTGGGGTCTCGGAGCACACCCTGGCCAGGTGAGGGCGATCACTCCGTTTCTCTATCTTCCCCACACTCCTaGTGGGTCAGAGTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LGSRSTPWPGEGDHSVSLSSPHS*WVRVRC
Trigger: GCACCGCACTCTGACCCATCAGGAGTGTGGGGAAGA...TAGAGAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp TGCGGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGGTGGCCAGCTTATCATaGCAAGCGTCTATGAGAAAT +
Preference number: 4 (lower is better)
Translates to: CGLCGSLPAVAAGLRGPLVASLS*QASMRN
Trigger: ATTTCTCATAGACGCTTGTCATGATAAGCTGGCCAC...CAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp CACCAGATCTGCGTCGCCGGCCCCTGGGAATGCCACCTGCAGGTAGTGGAAGCGGCTTCTCCGGGTAGATaGACTCCTGTCGCTCGTACT +
Preference number: 4 (lower is better)
Translates to: HQICVAGPWECHLQVVEAASPGR*TPVART
Trigger: AGTACGAGCGACAGGAGTTCATCTACCCGGAGAAGC...CGCTTCCACTACCTGCAGGTGGCATTCCCAGGGGCCGGCGACGCAGATCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR GCA 90 bp CCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTGCGGAGTTTTTGATTCTGTaGTGTTCTGAGCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: PEVIPCPQGRPQVGAACAEFLIL*CSEQPS
Trigger: GGACGGCTGCTCAGAACAGCACAGAATCAAAAACTC...CGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp CACTGCGTTGGCGAGCTCATGGCACGTGGCCACACCGCGTCAGCGCCGACTCCAACAATCCCTGCTCACTaGAACCTCTGCCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: HCVGELMARGHTASAPTPTIPAH*NLCLLV
Trigger: AACCAGGAGGCAGAGGTTGCAGTGAGCAGGGATTGT...TGGAGTCGGCGCTGACGCGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp AGAGAACCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCAAGACAGCAGACACCTaGTTCACACCACACGTCACC +
Preference number: 4 (lower is better)
Translates to: REPEVIPCPQGRPQVGAAKTADT*FTPHVT
Trigger: GGTGACGTGTGGTGTGAAGCAGGTGTCTGCTGTCTT...GGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGGTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GACTGTCTCCTCGGAGGTCACTATGCATCTCAAGGGGAGGTTTCTCAAGACAGCACGCCCCCAGGTCGGTaGGGCCTGTGCGGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: DCLLGGHYASQGEVSQDSTPPGR*GLCGSL
Trigger: GAGCGAGCCGCACAGGCCGCACCGACCTGGGGGCGT...GCTGTCTTGAGAAACCTCCCCTTGAGATGCATAGTGACCTCCGAGGAGACAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp CGCCGGCCCCTGGGAATGCCACCTGCAGGTAGTGGAAGCGAGCAGCTCGGAGTGGGTTTATGCTTGAAGTaGGCCTCCACTGCGTACTCC +
Preference number: 4 (lower is better)
Translates to: RRPLGMPPAGSGSEQLGVGLCLK*ASTAYS
Trigger: GGAGTACGCAGTGGAGGCGCACTTCAAGCATAAACC...CACTCCGAGCTGCTCGCTTCCACTACCTGCAGGTGGCATTCCCAGGGGCCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp GCACTGGGTGGACATGGGCCGGGTTTCCGTGACCCACAGGCAACTTTGGCACAGTGGCGGTCGACATGTTaGCGACTCCGGAGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: ALGGHGPGFRDPQATLAQWRSTC*RLRSLR
Trigger: TCGCAGACTCCGGAGTCGCCAACATGTCGACCGCCA...CTGTGCCAAAGTTGCCTGTGGGTCACGGAAACCCGGCCCATGTCCACCCAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CAGGCAAACAGAAACTTGCGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGGGCAGTCGGAGGGCGTaGGCCGGTAGTAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QANRNLRSGVTMVMPCGQGSRRA*AGSRRR
Trigger: CCTCCTTCTACTACCGGCCCACGCCCTCCGACTGCC...CTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp CTCTCCTTGCTGCCAATGAAGACTTCCCCTCGGGCGAAGGCGTCCAGGGGGTCTCCTGTCGCTCGTACTTaGCCCGGATCCACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSLLPMKTSPRAKASRGSPVART*PGSTAL
Trigger: GAGAGCAGTGGATCCGGGCCAAGTACGAGCGACAGG...AGACCCCCTGGACGCCTTCGCCCGAGGGGAAGTCTTCATTGGCAGCAAGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR TCA 90 bp CTGACAGAGAGCAGACACGGGACAGTGACAGCTGCAGCCGAATCAGGTGGTAGATTGGCACAGACGGGCTaGGAACTCCGCTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LTESRHGTVTAAAESGGRLAQTG*ELRSGP
Trigger: GGGCCCTGAGCGGAGTTCTCAGCCCGTCTGTGCCAA...TCTACCACCTGATTCGGCTGCAGCTGTCACTGTCCCGTGTCTGCTCTCTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp CCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTGCGCCATCTGTGACATTTTaGAGAGGGAAGCACGAAGTT +
Preference number: 4 (lower is better)
Translates to: PEVIPCPQGRPQVGAACAPSVTF*RGKHEV
Trigger: AACTTCGTGCTTCCCTCTTCAAAATGTCACAGATGG...CGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp TCGCCTCCCTCCCAGCTTTGCCGGGAACGCCGTCCCACTCAGGGGTTCAATGCACGTTCTGCTGTGACATaGCTGTCTCCTCGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SPPSQLCRERRPTQGFNARSAVT*LSPRRS
Trigger: TGACCTCCGAGGAGACAGTCATGTCACAGCAGAACG...TGCATTGAACCCCTGAGTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGAGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp TCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGGTGGCCCTGGGTGGACGGCCGTCCTCATGGTAGATaGAGATGTTACGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SGVTMVMPCGQWWPWVDGRPHGR*RCYGCC
Trigger: ACAGCACCCGTAACATCTTCATCTACCATGAGGACG...GCCGTCCACCCAGGGCCACCACTGGCCACATGGCATCACCATCGTCACGCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR TCA 90 bp GGTCCCCTCCGTCCAGCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGCACCAGCTCGGAGTGCATTaGACCAGTCCACAATCTCCT +
Preference number: 4 (lower is better)
Translates to: GPLRPATVSPMSVVLQPHQLGVH*TSPQSP
Trigger: AGGAGATTGTGGACTGGTTCAATGCACTCCGAGCTG...GTGCGGCTGGAGGACCACGGACATTGGACTCACTGTGGCTGGACGGAGGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR GCA 90 bp TCCCAGAGCCTGAGGTCGGCCAGATTGGTGGCCCCACCTGCCAGGGCTTGGAGAAGATGTGCAGGCACCTaGGTTCCATCCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SQSLRSARLVAPPARAWRRCAGT*VPSTGL
Trigger: CAAACCTGTGGATGGAACGCAGGTGCCTGCACATCT...TCTCCAAGCCCTGGCAGGTGGGGCCACCAATCTGGCCGACCTCAGGCTCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GTAAGCTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCACTGAGGCCCCAGATGTaGAGGCACCTGCGTTCCATC +
Preference number: 4 (lower is better)
Translates to: VSSRHIAALRWRAHGTWPLRPQM*RHLRSI
Trigger: GATGGAACGCAGGTGCCTGCACATCTGGGGCCTCAG...TGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GGGCCTCTGCCGTTCTGCTGTGACATGACTGTCTCCTCGGAGGTCACTATGCATCGACTCCACGGTGGCTaGGTCACGGCTCACGTGCAC +
Preference number: 4 (lower is better)
Translates to: GPLPFCCDMTVSSEVTMHRLHGG*VTAHVH
Trigger: GTGCACGTGAGCCGTGACGCAGCCACCGTGGAGTCG...ATGCATAGTGACCTCCGAGGAGACAGTCATGTCACAGCAGAACGGCAGAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp TCCAGCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGCACTCGCTAAGGTTGCCGGCCCCTGGGAATaGCACCTGCAGGTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SSHSESNVRGPPAALAKVAGPWE*HLQVVE
Trigger: TTCCACTACCTGCAGGTGGCATTCCCAGGGGCCGGC...AACCTTAGCGAGTGCGGCTGGAGGACCACGGACATTGGACTCACTGTGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp CCTGACGCACTGGGTGGACATGGGCCGGGTTTCCGTGACCCACAGGCAACTTTGGCGGCTGGAAGCTCTTaGTCCCGAAATTCATGGCGG +
Preference number: 4 (lower is better)
Translates to: PDALGGHGPGFRDPQATLAAGSS*SRNSWR
Trigger: CCGCCATGAATTTCGGGACCAAGAGCTTCCAGCCGC...CAAAGTTGCCTGTGGGTCACGGAAACCCGGCCCATGTCCACCCAGTGCGTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CAGGGCTTGGAGACAGCCACTGCCAGGGTCGCCAGAGAGGACGTGACCTGGACCTGTCTTTCCCACCTTTaGTCGACGGTCTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: QGLETATARVAREDVTWTCLSHL*STVFPT
Trigger: TGTGGGGAAGACCGTCGACCAAAGGTGGGAAAGACA...GGTCCAGGTCACGTCCTCTCTGGCGACCCTGGCAGTGGCTGTCTCCAAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp TCCCAGAGCCTGAGGTCGGCCAGATTGGTGGCCCCACCTGCCAGGGCTTGGAGAGCAACCTCTGCCTCCTaGTTTAGGCAATTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SQSLRSARLVAPPARAWRATSAS*FRQFSH
Trigger: GTGGGAGAATTGCCTAAACCAGGAGGCAGAGGTTGC...TCTCCAAGCCCTGGCAGGTGGGGCCACCAATCTGGCCGACCTCAGGCTCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp AGAGAACCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCACAATGGCGCTATTTTaGGATTCCGGCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: REPEVIPCPQGRPQVGAATMALF*DSGFSA
Trigger: GGCAGAGAAGCCGGAATCCCAAAATAGCGCCATTGT...GGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGGTTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTGCGGAACAGCAGGGTGTCTaGATTCTTAAGCACAACACA +
Preference number: 4 (lower is better)
Translates to: PEVIPCPQGRPQVGAACAEQQGV*ILKHNT
Trigger: TGTGTTGTGCTTAAGAATCCAGACACCCTGCTGTTC...CGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp GAAGGTGGCGTTCAGGTGCTCGATCTTCATCACGGCCTTGGGCTCCTTGGCATCGCGGCGTCGTTCCCGTaGGAGGCCATGAACTCCACT +
Preference number: 4 (lower is better)
Translates to: EGGVQVLDLHHGLGLLGIAASFP*EAMNST
Trigger: AGTGGAGTTCATGGCCTCCCACGGGAACGACGCCGC...GATGCCAAGGAGCCCAAGGCCGTGATGAAGATCGAGCACCTGAACGCCACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp TCCAGCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGCACTCGCTAAGGTTCCGATCTTGGCCGGCTaGAAGGTGGCGTTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SSHSESNVRGPPAALAKVPILAG*KVAFRC
Trigger: GCACCTGAACGCCACCTTCCAGCCGGCCAAGATCGG...AACCTTAGCGAGTGCGGCTGGAGGACCACGGACATTGGACTCACTGTGGCTGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR CAA 72 bp CTTCACAGTAAGCTCACGCCATATAGCCGCACTGCGTaGGCGAGCTCATGGCACGTGGCCACACCGCGTCAG +
Preference number: 4 (lower is better)
Translates to: LHSKLTPYSRTA*ASSWHVATPRQ
Trigger: CTGACGCGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCTTACTGTGAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CAA 72 bp CTCTGGTCGGACTCCGTCTCGCAGGCAAACAGAAACTaGCGGTCGGGCGTGACGATGGTGATGCCATGTGGC +
Preference number: 4 (lower is better)
Translates to: LWSDSVSQANRN*RSGVTMVMPCG
Trigger: GCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGCCTGCGAGACGGAGTCCGACCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR TCA 90 bp CTGGGGTCTCGGAGCACACCCTGGCCAGGTGAGGGCGATCACTCCGTTTCTCTACTGCCTGTGACCTGCTaGAACCATTCATGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: LGSRSTPWPGEGDHSVSLLPVTC*NHSCRH
Trigger: ATGCCGGCATGAATGGTTTCAGCAGGTCACAGGCAG...TAGAGAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp GGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGCCGCATGACAAGCGTCTATaGGAAATAAAATGCATTCTG +
Preference number: 4 (lower is better)
Translates to: GLCGSLPAVAAGLRGPLPHDKRL*EIKCIL
Trigger: CAGAATGCATTTTATTTCTCATAGACGCTTGTCATG...CGGCAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp CTTCTCCGGGTAGATGAACTCCTGTCGCTCGTACTTGGCCCGGATCCACTGCTCTCCGTCCAGCCACAGTaGGTCCAATGTCCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LLRVDELLSLVLGPDPLLSVQPQ*VQCPWS
Trigger: GGACCACGGACATTGGACTCACTGTGGCTGGACGGA...GAGCAGTGGATCCGGGCCAAGTACGAGCGACAGGAGTTCATCTACCCGGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR GCA 90 bp GCACTGGGTGGACATGGGCCGGGTTTCCGTGACCCACAGGCAACTTTGGCACAGGGTTGCTATAGACAGTaGTGGGGCAACCCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: ALGGHGPGFRDPQATLAQGCYRQ*WGNPVP
Trigger: AGGCACAGGGTTGCCCCAGCACTGTCTATAGCAACC...CTGTGCCAAAGTTGCCTGTGGGTCACGGAAACCCGGCCCATGTCCACCCAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp CTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCACACCGGCGTTGGGAAGCCACTaGACGTTTGTAAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LTPYSRTALASSWHVATPALGSH*TFVRSQ
Trigger: CTGACTCCTTACAAACGTGCAGTGGCTTCCCAACGC...CGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GAAGGTGGCGTTCAGGTGCTCGATCTTCATCACGGCCTTGGGCTCCTTGGCATCGAAGTGCGCCTCCACTaGGTACTCCTGGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: EGGVQVLDLHHGLGLLGIEVRLH*VLLGQH
Trigger: ATGCTGCCCCAGGAGTACGCAGTGGAGGCGCACTTC...GATGCCAAGGAGCCCAAGGCCGTGATGAAGATCGAGCACCTGAACGCCACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp CTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCACACCGTGGTCCCGAAATTCATaGCGGTCGACATGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LTPYSRTALASSWHVATPWSRNS*RSTCWR
Trigger: TCGCCAACATGTCGACCGCCATGAATTTCGGGACCA...CGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp TCCCAGAGCCTGAGGTCGGCCAGATTGGTGGCCCCACCTGCCAGGGCTTGGAGATTTGCTGCAGAGAACTaGAGATGGGCTGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SQSLRSARLVAPPARAWRFAAEN*RWAEKP
Trigger: AGGCTTCTCAGCCCATCTCCAGTTCTCTGCAGCAAA...TCTCCAAGCCCTGGCAGGTGGGGCCACCAATCTGGCCGACCTCAGGCTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp TCGCCTCCCTCCCAGCTTTGCCGGGAACGCCGTCCCACTCAGGGGTTCAATGCATGCTATAGACAGTGCTaGGGCAACCCTGTGCCTACA +
Preference number: 4 (lower is better)
Translates to: SPPSQLCRERRPTQGFNACYRQC*GNPVPT
Trigger: TGTAGGCACAGGGTTGCCCCAGCACTGTCTATAGCA...TGCATTGAACCCCTGAGTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGAGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CTGGGGTCTCGGAGCACACCCTGGCCAGGTGAGGGCGATCACTCCGTTTCTCTAGGCCTCCCGAATAGCTaGATTACAGACACACGCCAC +
Preference number: 4 (lower is better)
Translates to: LGSRSTPWPGEGDHSVSLGLPNS*ITDTRH
Trigger: GTGGCGTGTGTCTGTAATCCAGCTATTCGGGAGGCC...TAGAGAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CTGGGGTCTCGGAGCACACCCTGGCCAGGTGAGGGCGATCACTCCGTTTCTCTATCTCGTGAGAAGCTCTaGCAGGAACAGCAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LGSRSTPWPGEGDHSVSLSREKL*QEQQGV
Trigger: GACACCCTGCTGTTCCTGCCAGAGCTTCTCACGAGA...TAGAGAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp AAGGCGTCCAGGGGGTCTTTGAAGTACATGAGCCTGCGGTCATCCATGGTGAACTGCTCTCGAAGGAGCTaGCAGTCGGAGGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: KASRGSLKYMSLRSSMVNCSRRS*QSEGVG
Trigger: GCCCACGCCCTCCGACTGCCAGCTCCTTCGAGAGCA...GTTCACCATGGATGACCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp GAAGGCGTCCAGGGGGTCTTTGAAGTACATGAGCCTGCGGTCATCCATGGTGAATGCGTCGCCGGCCCCTaGGAATGCCACCTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: EGVQGVFEVHEPAVIHGECVAGP*ECHLQV
Trigger: TACCTGCAGGTGGCATTCCCAGGGGCCGGCGACGCA...TTCACCATGGATGACCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR TCA 90 bp ACCCTCCTAAGGGAAAACGGGACGCCACTCCCTACCCAGGAGACGCCCCCACAGCACAGTGCCCATCTGTaGCATTTTGAAGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: TLLRENGTPLPTQETPPQHSAHL*HFEEGS
Trigger: GCTTCCCTCTTCAAAATGTCACAGATGGGCACTGTG...CTGTGGGGGCGTCTCCTGGGTAGGGAGTGGCGTCCCGTTTTCCCTTAGGAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp GTAAGCTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCATCTGCCGTTCTGCTGTaGCATGACTGTCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: VSSRHIAALRWRAHGTWPSAVLL*HDCLLG
Trigger: TCCGAGGAGACAGTCATGTCACAGCAGAACGGCAGA...TGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCTTAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp CTGGGGTCTCGGAGCACACCCTGGCCAGGTGAGGGCGATCACTCCGTTTCTCTACGGCTTCTCTGCCTGTaGCCTGCTGAAACCATTCAT +
Preference number: 4 (lower is better)
Translates to: LGSRSTPWPGEGDHSVSLRLLCL*PAETIH
Trigger: ATGAATGGTTTCAGCAGGTCACAGGCAGAGAAGCCG...TAGAGAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp TCCAGCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGCACTCGCTAAGGTTAGCAGCTCAGGCAGATaGAGACGCCCAGAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: SSHSESNVRGPPAALAKVSSSGR*RRPECR
Trigger: CCTACACTCTGGGCGTCTTCATCTGCCTGAGCTGCT...AACCTTAGCGAGTGCGGCTGGAGGACCACGGACATTGGACTCACTGTGGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR GCA 90 bp CTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCACACCGCTGAGGGTTGTAATCTaGACCTGTCACCAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LTPYSRTALASSWHVATPLRVVI*TCHQCG
Trigger: ACCACACTGGTGACAGGTGCAGATTACAACCCTCAG...CGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GTAAGCTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCATGGTGGCACAATCCCTaGTCACTGCAACCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VSSRHIAALRWRAHGTWPWWHNP*SLQPLP
Trigger: AGGCAGAGGTTGCAGTGAGCAGGGATTGTGCCACCA...TGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GCACTGGGTGGACATGGGCCGGGTTTCCGTGACCCACAGGCAACTTTGGCACAGCCTCGGAGGTCACTATaGATCTCAAGGGGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: ALGGHGPGFRDPQATLAQPRRSL*ISRGGF
Trigger: GAAACCTCCCCTTGAGATGCATAGTGACCTCCGAGG...CTGTGCCAAAGTTGCCTGTGGGTCACGGAAACCCGGCCCATGTCCACCCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp AGAGAACCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCGGTTTCAGTTACCCATaGTCAGCCACAGTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: REPEVIPCPQGRPQVGAAGFSYP*SATVQK
Trigger: TTTTTGGACTGTGGCTGACCATGGGTAACTGAAACC...GGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGGTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp ACCCTCCTAAGGGAAAACGGGACGCCACTCCCTACCCAGGAGACGCCCCCACAGATACCTTCTCTGGCCTaGCCCTGGTTCCTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: TLLRENGTPLPTQETPPQIPSLA*PWFLLV
Trigger: AACCAAAAGGAACCAGGGCCAGGCCAGAGAAGGTAT...CTGTGGGGGCGTCTCCTGGGTAGGGAGTGGCGTCCCGTTTTCCCTTAGGAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CCTGACGCACTGGGTGGACATGGGCCGGGTTTCCGTGACCCACAGGCAACTTTGACTCAAAGGCAGCGTTaGGAAGCCACTGCACGTTTG +
Preference number: 4 (lower is better)
Translates to: PDALGGHGPGFRDPQATLTQRQR*EATARL
Trigger: CAAACGTGCAGTGGCTTCCCAACGCTGCCTTTGAGT...CAAAGTTGCCTGTGGGTCACGGAAACCCGGCCCATGTCCACCCAGTGCGTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp GGCAAACAGAAACTTGCGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGTGGGGGATATTCCGGTaGATTCCCGAGCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GKQKLAVGRDDGDAMWPVWGIFR*IPEQLR
Trigger: CCTGAGCTGCTCGGGAATCCACCGGAATATCCCCCA...CACTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp TCGCTCGTACTTGGCCCGGATCCACTGCTCTCGAAGGAGCTGGCAGTCGGAGGGAGAAGGAGGGTACTTTaGACTCAAACCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SLVLGPDPLLSKELAVGGRRRVL*TQTWLS
Trigger: CGAGAGCCAGGTTTGAGTCCAAAGTACCCTCCTTCT...CCCTCCGACTGCCAGCTCCTTCGAGAGCAGTGGATCCGGGCCAAGTACGAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp TCGCTCGTACTTGGCCCGGATCCACTGCTCTCGAAGGAGCTGGCAGTCGGAGGGTCTTCATCACGGCCTTaGGCTCCTTGGCATCATTTC +
Preference number: 4 (lower is better)
Translates to: SLVLGPDPLLSKELAVGGSSSRP*APWHHF
Trigger: GAAATGATGCCAAGGAGCCCAAGGCCGTGATGAAGA...CCCTCCGACTGCCAGCTCCTTCGAGAGCAGTGGATCCGGGCCAAGTACGAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp ACCCTCACGGTACCCTGCCGAGTAGGGCTCCTGCTTCTCCGGGTAGATGAACTCAGCCTTCCGTTTGCTTaGGCCCCGTCTTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: TLTVPCRVGLLLLRVDELSLPFA*APSSPC
Trigger: ACATGGAGAAGACGGGGCCCAAGCAAACGGAAGGCT...GAGTTCATCTACCCGGAGAAGCAGGAGCCCTACTCGGCAGGGTACCGTGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR TCA 90 bp CTGACAGAGAGCAGACACGGGACAGTGACAGCTGCAGCCGAATCAGGTGGTAGAGATTCTGTGCTGTTCTaGGCAGCCGTCCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LTESRHGTVTAAAESGGRDSVLF*AAVLLG
Trigger: TCCCAGCAGGACGGCTGCTCAGAACAGCACAGAATC...TCTACCACCTGATTCGGCTGCAGCTGTCACTGTCCCGTGTCTGCTCTCTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GCACTGGGTGGACATGGGCCGGGTTTCCGTGACCCACAGGCAACTTTGGCACAGACAGAAGACAGCTGGTaGGAGCCTAACTGCAAATGG +
Preference number: 4 (lower is better)
Translates to: ALGGHGPGFRDPQATLAQTEDSW*EPNCKW
Trigger: CCATTTGCAGTTAGGCTCGCACCAGCTGTCTTCTGT...CTGTGCCAAAGTTGCCTGTGGGTCACGGAAACCCGGCCCATGTCCACCCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GTAAGCTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCAGCTGGGAAGCATTTGTaGACAGCCCCTCACAACAGT +
Preference number: 4 (lower is better)
Translates to: VSSRHIAALRWRAHGTWPAGKHL*TAPHNS
Trigger: ACTGTTGTGAGGGGCTGTGCACAAATGCTTCCCAGC...TGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp AAGGCGTCCAGGGGGTCTTTGAAGTACATGAGCCTGCGGTCATCCATGGTGAACTGGCGGTCGACATGTTaGCGACTCCGGAGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: KASRGSLKYMSLRSSMVNWRSTC*RLRSLR
Trigger: TCGCAGACTCCGGAGTCGCCAACATGTCGACCGCCA...GTTCACCATGGATGACCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp GACTGTCTCCTCGGAGGTCACTATGCATCTCAAGGGGAGGTTTCTCAAGACAGCTCGGGCGGAGCTGGCTaGCACAGAAGACAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: DCLLGGHYASQGEVSQDSSGGAG*HRRQLV
Trigger: CACCAGCTGTCTTCTGTGCCAGCCAGCTCCGCCCGA...GCTGTCTTGAGAAACCTCCCCTTGAGATGCATAGTGACCTCCGAGGAGACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp AGAGAACCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCGTTCCCCTCACATCCTaGTTCATTTACTTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: REPEVIPCPQGRPQVGAAVPLTS*FIYFLS
Trigger: GCTCAAAAAGTAAATGAACCAGGATGTGAGGGGAAC...GGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGGTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp GACTGTCTCCTCGGAGGTCACTATGCATCTCAAGGGGAGGTTTCTCAAGACAGCGAGCAGCCGTCCTGCTaGGACATCAACCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: DCLLGGHYASQGEVSQDSEQPSC*DINPPS
Trigger: GGAGGGAGGGTTGATGTCCCAGCAGGACGGCTGCTC...GCTGTCTTGAGAAACCTCCCCTTGAGATGCATAGTGACCTCCGAGGAGACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CTGGGGTCTCGGAGCACACCCTGGCCAGGTGAGGGCGATCACTCCGTTTCTCTATCTCTGGCCTGGCCCTaGTTCCTTTTGGTTACAGAA +
Preference number: 4 (lower is better)
Translates to: LGSRSTPWPGEGDHSVSLSLAWP*FLLVTE
Trigger: TTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGA...TAGAGAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCACACCGCACCTGTCACCAGTGTaGTTTCTGCAACAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: LTPYSRTALASSWHVATPHLSPV*FLQQQF
Trigger: AAACTGCTGTTGCAGAAACCACACTGGTGACAGGTG...CGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp GAAGGCGTCCAGGGGGTCTTTGAAGTACATGAGCCTGCGGTCATCCATGGTGAATGGCCGGCTGGAAGGTaGCGTTCAGGTGCTCGATCT +
Preference number: 4 (lower is better)
Translates to: EGVQGVFEVHEPAVIHGEWPAGR*RSGARS
Trigger: AGATCGAGCACCTGAACGCCACCTTCCAGCCGGCCA...TTCACCATGGATGACCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp AAGGCGTCCAGGGGGTCTTTGAAGTACATGAGCCTGCGGTCATCCATGGTGAACGATGGTGATGCCATGTaGCCAGTGGTGGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KASRGSLKYMSLRSSMVNDGDAM*PVVALG
Trigger: ACCCAGGGCCACCACTGGCCACATGGCATCACCATC...GTTCACCATGGATGACCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp AGCACCCTCTCGTTCTGTCAGCACAAACTTCCGGCTCAAAAACTGCCCGTTGTCACTCCTGGGGCAGCATaGGCCTGTCCACCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: STLSFCQHKLPAQKLPVVTPGAA*ACPPPS
Trigger: AGAAGGCGGTGGACAGGCCCATGCTGCCCCAGGAGT...GACAACGGGCAGTTTTTGAGCCGGAAGTTTGTGCTGACAGAACGAGAGGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457254.5
3UTR CAA 72 bp CCGGCCTGGGCCCGGGAGCTCCGTCGGCATGGTCTGTaGTGTTCCCCTCACATCCTGGTTCATTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: PAWARELRRHGL*CSPHILVHLLF
Trigger: AAAAAGTAAATGAACCAGGATGTGAGGGGAACACAACAGACCATGCCGACGGAGCTCCCGGGCCCAGGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp CAGGCAAACAGAAACTTGCGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGTTACATTCACCTAAGTaGTCCAGCGGGAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QANRNLRSGVTMVMPCGQLHSPK*SSGKLP
Trigger: GGGCAGCTTCCCGCTGGATCACTTAGGTGAATGTAA...CTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR TCA 90 bp GAAGGCGTCCAGGGGGTCTTTGAAGTACATGAGCCTGCGGTCATCCATGGTGAACGGACTTCACCTTGCTaGCCTGGGGGATATTCCGGT +
Preference number: 4 (lower is better)
Translates to: EGVQGVFEVHEPAVIHGERTSPC*PGGYSG
Trigger: ACCGGAATATCCCCCAGGTCAGCAAGGTGAAGTCCG...TTCACCATGGATGACCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR TCA 90 bp GAAGGCGTCCAGGGGGTCTTTGAAGTACATGAGCCTGCGGTCATCCATGGTGAATCTCCTTGCTGCCAATaGAGACTTCCCCTCGGGCGA +
Preference number: 4 (lower is better)
Translates to: EGVQGVFEVHEPAVIHGESPCCQ*RLPLGR
Trigger: TCGCCCGAGGGGAAGTCTTCATTGGCAGCAAGGAGA...TTCACCATGGATGACCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR GCA 90 bp CAGGGCTTGGAGACAGCCACTGCCAGGGTCGCCAGAGAGGACGTGACCTGGACCAAAGTATCAGAGGACTaGAACATAAAACCGCCCCAT +
Preference number: 4 (lower is better)
Translates to: QGLETATARVAREDVTWTKVSED*NIKPPH
Trigger: ATGGGGCGGTTTTATGTTGCAGTCCTCTGATACTTT...GGTCCAGGTCACGTCCTCTCTGGCGACCCTGGCAGTGGCTGTCTCCAAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GCACTGGGTGGACATGGGCCGGGTTTCCGTGACCCACAGGCAACTTTGGCACAGCACCAGTGTGGTTTCTaGAACAGCAGTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: ALGGHGPGFRDPQATLAQHQCGF*NSSFLF
Trigger: GAACAGGAAACTGCTGTTGCAGAAACCACACTGGTG...CTGTGCCAAAGTTGCCTGTGGGTCACGGAAACCCGGCCCATGTCCACCCAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp AGCACCCTCTCGTTCTGTCAGCACAAACTTCCGGCTCAAAAACTGCCCGTTGTCTTGGCCCGGATCCACTaGTCTCGAAGGAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: STLSFCQHKLPAQKLPVVLARIH*SRRSWQ
Trigger: CTGCCAGCTCCTTCGAGAGCAGTGGATCCGGGCCAA...GACAACGGGCAGTTTTTGAGCCGGAAGTTTGTGCTGACAGAACGAGAGGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp GCAAACAGAAACTTGCGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGGTGGTCCCGAAATTCATaGCGGTCGACATGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: ANRNLRSGVTMVMPCGQWWSRNS*RSTCWR
Trigger: TCGCCAACATGTCGACCGCCATGAATTTCGGGACCA...CCACTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp GACTGTCTCCTCGGAGGTCACTATGCATCTCAAGGGGAGGTTTCTCAAGACAGCACGCCCCCACAGGGCTaGAGCTTCTATTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: DCLLGGHYASQGEVSQDSTPPQG*SFYSKP
Trigger: GGGCTTCGAATAGAAGCTCCAGCCCTGTGGGGGCGT...GCTGTCTTGAGAAACCTCCCCTTGAGATGCATAGTGACCTCCGAGGAGACAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CAA 72 bp TCTGTCAGCACAAACTTCCGGCTCAAAAACTGCCCGTaGTCCCGGCCACGCTTCCAGAGAAAACCCTCACGG +
Preference number: 4 (lower is better)
Translates to: SVSTNFRLKNCP*SRPRFQRKPSR
Trigger: CCGTGAGGGTTTTCTCTGGAAGCGTGGCCGGGACAACGGGCAGTTTTTGAGCCGGAAGTTTGTGCTGACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR GCA 90 bp AATCTCCTTCCCGTCCTCATGGTAGATGAAGATGTTACGGGTGCTGTTGTCCTTGGCGACTCCGGAGTCTaGGAGCGCCTTGCGAGCGTA +
Preference number: 4 (lower is better)
Translates to: NLLPVLMVDEDVTGAVVLGDSGV*ERLASV
Trigger: TACGCTCGCAAGGCGCTCGCAGACTCCGGAGTCGCC...AAGGACAACAGCACCCGTAACATCTTCATCTACCATGAGGACGGGAAGGAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR GCA 90 bp CTCTCGTTCTGTCAGCACAAACTTCCGGCTCAAAAACTGCCCGTTGTCCCGGCCGCGAGCAGCTCGGAGTaGATTGAACCAGTCCACAAT +
Preference number: 4 (lower is better)
Translates to: LSFCQHKLPAQKLPVVPAASSSE*IEPVHN
Trigger: ATTGTGGACTGGTTCAATGCACTCCGAGCTGCTCGC...GGCCGGGACAACGGGCAGTTTTTGAGCCGGAAGTTTGTGCTGACAGAACGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp TCTCTGGCCTGGCCCTGGTTCCTTTTGGTTACAGAATGGTATCAGGGCCAAGACGCCATCGCGGTGATGTaGTGCTTGGGTCCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: SLAWPWFLLVTEWYQGQDAIAVM*CLGPRS
Trigger: GCTTCTTGGACCCAAGCACCACATCACCGCGATGGC...GTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CAGGCAAACAGAAACTTGCGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGTTCACCTTGCTGACCTaGGGGATATTCCGGTGGATT +
Preference number: 4 (lower is better)
Translates to: QANRNLRSGVTMVMPCGQFTLLT*GIFRWI
Trigger: AATCCACCGGAATATCCCCCAGGTCAGCAAGGTGAA...CTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp GCAAACAGAAACTTGCGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGGCCTTCAGGTAGTTCCTaGAGAGCTTTGGCACCAGAT +
Preference number: 4 (lower is better)
Translates to: ANRNLRSGVTMVMPCGQWPSGSS*RALAPD
Trigger: ATCTGGTGCCAAAGCTCTCCAGGAACTACCTGAAGG...CCACTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR TCA 90 bp TTGGCCGGCTGGAAGGTGGCGTTCAGGTGCTCGATCTTCATCACGGCCTTGGGCTGGCATCATTTCTGTTaGAATACTTCAGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: LAGWKVAFRCSIFITALGWHHFC*NTSEHP
Trigger: AGGGTGCTCTGAAGTATTTCAACAGAAATGATGCCA...GCCCAAGGCCGTGATGAAGATCGAGCACCTGAACGCCACCTTCCAGCCGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CCA 90 bp TTCCATCCACAGGTTTGGGCCCCGGCTGGCCTGACGCACTGGGTGGACATGGGCCGGCATCATGCCTATTaGAAACTCTTTGAAGTTATT +
Preference number: 4 (lower is better)
Translates to: FHPQVWAPAGLTHWVDMGRHHAY*KLFEVI
Trigger: AATAACTTCAAAGAGTTTCCAATAGGCATGATGCCG...GCCCATGTCCACCCAGTGCGTCAGGCCAGCCGGGGCCCAAACCTGTGGATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp AATCTCCTTCCCGTCCTCATGGTAGATGAAGATGTTACGGGTGCTGTTGTCCTTGCCATGAACTCCACTTaGGCCTCCTCCCAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: NLLPVLMVDEDVTGAVVLAMNST*ASSQAS
Trigger: GGACGCCTGGGAGGAGGCCCAAGTGGAGTTCATGGC...AAGGACAACAGCACCCGTAACATCTTCATCTACCATGAGGACGGGAAGGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR TCA 90 bp TCTCTGGCCTGGCCCTGGTTCCTTTTGGTTACAGAATGGTATCAGGGCCAAGACAGGTACTCAGTTCTGTaGGGAGGGGAGGGACATGTT +
Preference number: 4 (lower is better)
Translates to: SLAWPWFLLVTEWYQGQDRYSVL*GGEGHV
Trigger: AACATGTCCCTCCCCTCCTCACAGAACTGAGTACCT...GTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp GTAAGCTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCAAAAGGTGGAAACTCCTaGCCTATAAGAAAAACAGCC +
Preference number: 4 (lower is better)
Translates to: VSSRHIAALRWRAHGTWPKGGNS*PIRKTA
Trigger: GGCTGTTTTTCTTATAGGTCAGGAGTTTCCACCTTT...TGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAGCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CAA 72 bp CATCTGATACCTTCTCTGGCCTGGCCCTGGTTCCTTTaGGTTACAGAATGGTATCAGGGCCAAGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: HLIPSLAWPWFL*VTEWYQGQDPE
Trigger: CTCAGGGTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGAAGGTATCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CAA 72 bp AAGGCTCCTCGGTTTGGGTCTGTGTCTGTTGTCTCCTaGGGATTACATTCAGGCCATGCAGTTGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: KAPRFGSVSVVS*GLHSGHAVGQE
Trigger: CTCTTGCCCAACTGCATGGCCTGAATGTAATCCCAAGGAGACAACAGACACAGACCCAAACCGAGGAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp TCTCTGGCCTGGCCCTGGTTCCTTTTGGTTACAGAATGGTATCAGGGCCAAGACATCGCGGTGATGTGGTaGTTGGGTCCAAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: SLAWPWFLLVTEWYQGQDIAVMW*LGPRSF
Trigger: AAAGCTTCTTGGACCCAAGCACCACATCACCGCGAT...GTCTTGGCCCTGATACCATTCTGTAACCAAAAGGAACCAGGGCCAGGCCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CTGACAGAGAGCAGACACGGGACAGTGACAGCTGCAGCCGAATCAGGTGGTAGACTTTTGGTTACAGAATaGTATCAGGGCCAAGACCCT +
Preference number: 4 (lower is better)
Translates to: LTESRHGTVTAAAESGGRLLVTE*YQGQDP
Trigger: AGGGTCTTGGCCCTGATACCATTCTGTAACCAAAAG...TCTACCACCTGATTCGGCTGCAGCTGTCACTGTCCCGTGTCTGCTCTCTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp CACACGGTTTCAGTTACCCATGGTCAGCCACAGTCCAAAAATACTAAGTGGAAAGCAGACACGGGACAGTaGCAGCTGCAGCCGAATCAG +
Preference number: 4 (lower is better)
Translates to: HTVSVTHGQPQSKNTKWKADTGQ*QLQPNQ
Trigger: CTGATTCGGCTGCAGCTGTCACTGTCCCGTGTCTGC...TTTCCACTTAGTATTTTTGGACTGTGGCTGACCATGGGTAACTGAAACCGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GAATCAAGAAGTCAATCCATCCAAAGCCAGAAGGTTCTCACTTCCTACTTTGTGGCGTCACGGCTCACGTaGACTGTGAGGACACTGGGG +
Preference number: 4 (lower is better)
Translates to: ESRSQSIQSQKVLTSYFVASRLT*TVRTLG
Trigger: CCCCAGTGTCCTCACAGTGCACGTGAGCCGTGACGC...CACAAAGTAGGAAGTGAGAACCTTCTGGCTTTGGATGGATTGACTTCTTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp CACACGGTTTCAGTTACCCATGGTCAGCCACAGTCCAAAAATACTAAGTGGAAACCTGCCTCAGCTTCCTaGGTATCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: HTVSVTHGQPQSKNTKWKPASAS*VSGTTG
Trigger: GCCTGTAGTCCCAGATACTCAGGAAGCTGAGGCAGG...TTTCCACTTAGTATTTTTGGACTGTGGCTGACCATGGGTAACTGAAACCGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp CACACGGTTTCAGTTACCCATGGTCAGCCACAGTCCAAAAATACTAAGTGGAAACAAGAGAACCAGAGGTaGTACCGTGCCCTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: HTVSVTHGQPQSKNTKWKQENQR*YRALRD
Trigger: GTCCCTGAGGGCACGGTATCACCTCTGGTTCTCTTG...TTTCCACTTAGTATTTTTGGACTGTGGCTGACCATGGGTAACTGAAACCGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp AAGGAAATGAACTGGCATATACGAATACAAACACGAAAACATCCTGCTAGGGAACCATCCACGCCACCCTaGCTGCCAGGCACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: KEMNWHIRIQTRKHPAREPSTPP*LPGTQQ
Trigger: CTGCTGAGTGCCTGGCAGGCAGGGTGGCGTGGATGG...TTCCCTAGCAGGATGTTTTCGTGTTTGTATTCGTATATGCCAGTTCATTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp AAGGAAATGAACTGGCATATACGAATACAAACACGAAAACATCCTGCTAGGGAATCCGGGGGCCGCGGCTaGAAGCTCTTGGTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: KEMNWHIRIQTRKHPARESGGRG*KLLVPK
Trigger: TTTCGGGACCAAGAGCTTCCAGCCGCGGCCCCCGGA...TTCCCTAGCAGGATGTTTTCGTGTTTGTATTCGTATATGCCAGTTCATTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp AAGGAAATGAACTGGCATATACGAATACAAACACGAAAACATCCTGCTAGGGAAGCTGGCCTGACGCACTaGGTGGACATGGGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: KEMNWHIRIQTRKHPAREAGLTH*VDMGRV
Trigger: AACCCGGCCCATGTCCACCCAGTGCGTCAGGCCAGC...TTCCCTAGCAGGATGTTTTCGTGTTTGTATTCGTATATGCCAGTTCATTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp CACACGGTTTCAGTTACCCATGGTCAGCCACAGTCCAAAAATACTAAGTGGAAACAGGCTGGAGTGTGGTaGCACAATCCCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: HTVSVTHGQPQSKNTKWKQAGVW*HNPCSL
Trigger: CAGTGAGCAGGGATTGTGCCACCACACTCCAGCCTG...TTTCCACTTAGTATTTTTGGACTGTGGCTGACCATGGGTAACTGAAACCGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp GGGCCTCTGCCGTTCTGCTGTGACATGACTGTCTCCTCGGAGGTCACTATGCATAGCCTTTTAATAATGTaGCCAGCTTATCATGACAAG +
Preference number: 4 (lower is better)
Translates to: GPLPFCCDMTVSSEVTMHSLLIM*PAYHDK
Trigger: CTTGTCATGATAAGCTGGCCACATTATTAAAAGGCT...ATGCATAGTGACCTCCGAGGAGACAGTCATGTCACAGCAGAACGGCAGAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp ACCAGAAAGAATCAAGAAGTCAATCCATCCAAAGCCAGAAGGTTCTCACTTCCTACCCACAGGCAACTTTaGCACAGACGGGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: TRKNQEVNPSKARRFSLPTHRQL*HRRAEN
Trigger: GTTCTCAGCCCGTCTGTGCCAAAGTTGCCTGTGGGT...AGGAAGTGAGAACCTTCTGGCTTTGGATGGATTGACTTCTTGATTCTTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp TCATTTCTGTTGAAATACTTCAGAGCACCCTCTCGTTCTGTCAGCACAAACTTCGCTAAGGTTTATGCTTaGAGTGCGCCTCCACTGCGT +
Preference number: 4 (lower is better)
Translates to: SFLLKYFRAPSRSVSTNFAKVYA*SAPPLR
Trigger: ACGCAGTGGAGGCGCACTTCAAGCATAAACCTTAGC...GAAGTTTGTGCTGACAGAACGAGAGGGTGCTCTGAAGTATTTCAACAGAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR GCA 90 bp CACACGGTTTCAGTTACCCATGGTCAGCCACAGTCCAAAAATACTAAGTGGAAACACTCAGGGGTTCAATaGAGAAACACCCTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: HTVSVTHGQPQSKNTKWKHSGVQ*RNTLLR
Trigger: CCTTAGGAGGGTGTTTCTGCATTGAACCCCTGAGTG...TTTCCACTTAGTATTTTTGGACTGTGGCTGACCATGGGTAACTGAAACCGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp GAATCAAGAAGTCAATCCATCCAAAGCCAGAAGGTTCTCACTTCCTACTTTGTGAGTTTCCTGTGTCCCTaGCTGTCTCCACTTCACAGT +
Preference number: 4 (lower is better)
Translates to: ESRSQSIQSQKVLTSYFVSFLCP*LSPLHS
Trigger: ACTGTGAAGTGGAGACAGGCAGGGACACAGGAAACT...CACAAAGTAGGAAGTGAGAACCTTCTGGCTTTGGATGGATTGACTTCTTGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
3UTR CAA 72 bp ATCTCCGGTAAGAACACAGTGCCCATCTGTGACATTTaGAAGAGGGAAGCACGAAGTTCTGTCAGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: ISGKNTVPICDI*KREARSSVSFA
Trigger: AGCAAAACTGACAGAACTTCGTGCTTCCCTCTTCAAAATGTCACAGATGGGCACTGTGTTCTTACCGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp AAGGAAATGAACTGGCATATACGAATACAAACACGAAAACATCCTGCTAGGGAATTACATTCACCTAAGTaGTCCAGCGGGAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KEMNWHIRIQTRKHPARELHSPK*SSGKLP
Trigger: GGGCAGCTTCCCGCTGGATCACTTAGGTGAATGTAA...TTCCCTAGCAGGATGTTTTCGTGTTTGTATTCGTATATGCCAGTTCATTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp ACTTGGTGTTCAGGCAAAACCAGAAAGAATCAAGAAGTCAATCCATCCAAAGCCGGCCCTGGTTCCTTTTaGTTACAGAATGGTATCAGG +
Preference number: 4 (lower is better)
Translates to: TWCSGKTRKNQEVNPSKAGPGSF*LQNGIR
Trigger: CCTGATACCATTCTGTAACCAAAAGGAACCAGGGCC...GGCTTTGGATGGATTGACTTCTTGATTCTTTCTGGTTTTGCCTGAACACCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp ACCAGAAAGAATCAAGAAGTCAATCCATCCAAAGCCAGAAGGTTCTCACTTCCTAGGTTGTCCACACAATaGCGCTATTTTGGGATTCCG +
Preference number: 4 (lower is better)
Translates to: TRKNQEVNPSKARRFSLPRLSTQ*RYFGIP
Trigger: CGGAATCCCAAAATAGCGCCATTGTGTGGACAACCT...AGGAAGTGAGAACCTTCTGGCTTTGGATGGATTGACTTCTTGATTCTTTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR TCA 90 bp CACACGGTTTCAGTTACCCATGGTCAGCCACAGTCCAAAAATACTAAGTGGAAAGGTTCATTTACTTTTTaGGCATGTGAAACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: HTVSVTHGQPQSKNTKWKGSFTF*ACETLC
Trigger: GCAGAGGGTTTCACATGCTCAAAAAGTAAATGAACC...TTTCCACTTAGTATTTTTGGACTGTGGCTGACCATGGGTAACTGAAACCGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR GCA 90 bp AAGGAAATGAACTGGCATATACGAATACAAACACGAAAACATCCTGCTAGGGAATGGTGCGAGCCTAACTaGAAATGGACTCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: KEMNWHIRIQTRKHPAREWCEPN*KWTQVL
Trigger: AAGAACCTGAGTCCATTTGCAGTTAGGCTCGCACCA...TTCCCTAGCAGGATGTTTTCGTGTTTGTATTCGTATATGCCAGTTCATTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CCA 90 bp ACCAGAAAGAATCAAGAAGTCAATCCATCCAAAGCCAGAAGGTTCTCACTTCCTGATTATGAAGCTACTTaGTGTTCAGGCAAAACCAGA +
Preference number: 4 (lower is better)
Translates to: TRKNQEVNPSKARRFSLPDYEAT*CSGKTR
Trigger: TCTGGTTTTGCCTGAACACCAAGTAGCTTCATAATC...AGGAAGTGAGAACCTTCTGGCTTTGGATGGATTGACTTCTTGATTCTTTCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CAA 90 bp CCAGAGGTGATACCGTGCCCTCAGGGACGCCCCCAGGTCGGTGCGGCCTGTGCGGCCTCCCTCCCAGCTTaGCCGGGAACGCCGTCCCAC +
Preference number: 5 (lower is better)
Translates to: PEVIPCPQGRPQVGAACAASLPA*PGTPSH
Trigger: GTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGAGGC...CGCACAGGCCGCACCGACCTGGGGGCGTCCCTGAGGGCACGGTATCACCTCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CAA 90 bp TGCGGCCTGTGCGGCTCGCTCCCGGCGGTGGCTGCTGGGTTAAGGGGGCCTCTGTCGAAGACAAGGGTCTaGCCCCACGCTCGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: CGLCGSLPAVAAGLRGPLSKTRV*PHARLP
Trigger: AGGGAGGCGAGCGTGGGGCAAGACCCTTGTCTTCGA...CAGAGGCCCCCTTAACCCAGCAGCCACCGCCGGGAGCGAGCCGCACAGGCCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CAA 90 bp CGCCGGCCCCTGGGAATGCCACCTGCAGGTAGTGGAAGCGAGCAGCTCGGAGTGTGGGGGTGGCCGATCTaGGCCGGCTGGAAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: RRPLGMPPAGSGSEQLGVWGWPI*AGWKVA
Trigger: CGCCACCTTCCAGCCGGCCAAGATCGGCCACCCCCA...CACTCCGAGCTGCTCGCTTCCACTACCTGCAGGTGGCATTCCCAGGGGCCGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS CCA 90 bp CCTTGTCCGGGGGCCGCGGCTGGAAGCTCTTGGTCCCGAAATTCATaGCGGTCGACATGTTGGCGACTCCGGAGTCTGCGAGCGCCTTGC +
Preference number: 5 (lower is better)
Translates to: PCPGAAAGSSWSRNS*RSTCWRLRSLRAPC
Trigger: GCAAGGCGCTCGCAGACTCCGGAGTCGCCAACATGTCGACCGCCATGAATTTCGGGACCAAGAGCTTCCAGCCGCGGCCCCCGGACAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344111.4
ENST00000457254.5
ENST00000466146.1
CDS CCA 90 bp CCAGCGGGAAGCTGCCCTTGTCCGGGGGCCGCGGCTGGAAGCTCTTaGTCCCGAAATTCATGGCGGTCGACATGTTGGCGACTCCGGAGT +
Preference number: 5 (lower is better)
Translates to: PAGSCPCPGAAAGSS*SRNSWRSTCWRLRS
Trigger: ACTCCGGAGTCGCCAACATGTCGACCGCCATGAATTTCGGGACCAAGAGCTTCCAGCCGCGGCCCCCGGACAAGGGCAGCTTCCCGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344111.4
ENST00000457254.5
ENST00000466146.1
CDS-3UTR CAA 90 bp CAGGGCTTGGAGACAGCCACTGCCAGGGTCGCCAGAGAGGACGTGACCTGGACCTATAGCCGCACTGCGTaGGCGAGCTCATGGCACGTG +
Preference number: 5 (lower is better)
Translates to: QGLETATARVAREDVTWTYSRTA*ASSWHV
Trigger: CACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATA...GGTCCAGGTCACGTCCTCTCTGGCGACCCTGGCAGTGGCTGTCTCCAAGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CAA 90 bp GGTCCCCTCCGTCCAGCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGCACCTCAAAAACTGCCCGTaGTCCCGGCCACGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: GPLRPATVSPMSVVLQPHLKNCP*SRPRFQ
Trigger: CTGGAAGCGTGGCCGGGACAACGGGCAGTTTTTGAG...GTGCGGCTGGAGGACCACGGACATTGGACTCACTGTGGCTGGACGGAGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CAA 90 bp GGTCCCCTCCGTCCAGCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGCACGCGTCCAGGGGGTCTTaGAAGTACATGAGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: GPLRPATVSPMSVVLQPHASRGS*KYMSLR
Trigger: CCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGC...GTGCGGCTGGAGGACCACGGACATTGGACTCACTGTGGCTGGACGGAGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CAA 90 bp GCACTGGGTGGACATGGGCCGGGTTTCCGTGACCCACAGGCAACTTTGGCACAGATGGCGGTCGACATGTaGGCGACTCCGGAGTCTGCG +
Preference number: 5 (lower is better)
Translates to: ALGGHGPGFRDPQATLAQMAVDM*ATPESA
Trigger: CGCAGACTCCGGAGTCGCCAACATGTCGACCGCCAT...CTGTGCCAAAGTTGCCTGTGGGTCACGGAAACCCGGCCCATGTCCACCCAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CAA 90 bp CACTCCCTCTGGTCGGACTCCGTCTCGCAGGCAAACAGAAACTTGCGGTCGGGCATGGCGGTCGACATGTaGGCGACTCCGGAGTCTGCG +
Preference number: 5 (lower is better)
Translates to: HSLWSDSVSQANRNLRSGMAVDM*ATPESA
Trigger: CGCAGACTCCGGAGTCGCCAACATGTCGACCGCCAT...GCCCGACCGCAAGTTTCTGTTTGCCTGCGAGACGGAGTCCGACCAGAGGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CAA 90 bp ACCCTCCTAAGGGAAAACGGGACGCCACTCCCTACCCAGGAGACGCCCCCACAGCGCGGCTGGAAGCTCTaGGTCCCGAAATTCATGGCG +
Preference number: 5 (lower is better)
Translates to: TLLRENGTPLPTQETPPQRGWKL*VPKFMA
Trigger: CGCCATGAATTTCGGGACCAAGAGCTTCCAGCCGCG...CTGTGGGGGCGTCTCCTGGGTAGGGAGTGGCGTCCCGTTTTCCCTTAGGAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CAA 90 bp CAGGGCTTGGAGACAGCCACTGCCAGGGTCGCCAGAGAGGACGTGACCTGGACCAACTCAAAGGCAGCGTaGGGAAGCCACTGCACGTTT +
Preference number: 5 (lower is better)
Translates to: QGLETATARVAREDVTWTNSKAA*GSHCTF
Trigger: AAACGTGCAGTGGCTTCCCAACGCTGCCTTTGAGTT...GGTCCAGGTCACGTCCTCTCTGGCGACCCTGGCAGTGGCTGTCTCCAAGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CAA 90 bp CACTCCCTCTGGTCGGACTCCGTCTCGCAGGCAAACAGAAACTTGCGGTCGGGCCGGACGGACTTCACCTaGCTGACCTGGGGGATATTC +
Preference number: 5 (lower is better)
Translates to: HSLWSDSVSQANRNLRSGRTDFT*LTWGIF
Trigger: GAATATCCCCCAGGTCAGCAAGGTGAAGTCCGTCCG...GCCCGACCGCAAGTTTCTGTTTGCCTGCGAGACGGAGTCCGACCAGAGGGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CAA 90 bp GCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGCACTCGCTAAGGTTTATGGGCCATGAACTCCACTaGGGCCTCCTCCCAGGCGTC +
Preference number: 5 (lower is better)
Translates to: ATVSPMSVVLQPHSLRFMGHELH*GLLPGV
Trigger: GACGCCTGGGAGGAGGCCCAAGTGGAGTTCATGGCC...CATAAACCTTAGCGAGTGCGGCTGGAGGACCACGGACATTGGACTCACTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CAA 90 bp GACTGTCTCCTCGGAGGTCACTATGCATCTCAAGGGGAGGTTTCTCAAGACAGCCTGAGGTCGGCCAGATaGGTGGCCCCACCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: DCLLGGHYASQGEVSQDSLRSAR*VAPPAR
Trigger: CCTGGCAGGTGGGGCCACCAATCTGGCCGACCTCAG...GCTGTCTTGAGAAACCTCCCCTTGAGATGCATAGTGACCTCCGAGGAGACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CAA 90 bp ACCCTCACGGTACCCTGCCGAGTAGGGCTCCTGCTTCTCCGGGTAGATGAACTCCAGGCAAACAGAAACTaGCGGTCGGGCGTGACGATG +
Preference number: 5 (lower is better)
Translates to: TLTVPCRVGLLLLRVDELQANRN*RSGVTM
Trigger: CATCGTCACGCCCGACCGCAAGTTTCTGTTTGCCTG...GAGTTCATCTACCCGGAGAAGCAGGAGCCCTACTCGGCAGGGTACCGTGAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CAA 90 bp CTGGGGTCTCGGAGCACACCCTGGCCAGGTGAGGGCGATCACTCCGTTTCTCTACACAATGGCGCTATTTaGGGATTCCGGCTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LGSRSTPWPGEGDHSVSLHNGAI*GFRLLC
Trigger: GCAGAGAAGCCGGAATCCCAAAATAGCGCCATTGTG...TAGAGAAACGGAGTGATCGCCCTCACCTGGCCAGGGTGTGCTCCGAGACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CAA 90 bp GGGCCTCTGCCGTTCTGCTGTGACATGACTGTCTCCTCGGAGGTCACTATGCATCTGTCTTTCCCACCTTaGGTCGACGGTCTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: GPLPFCCDMTVSSEVTMHLSFPP*VDGLPH
Trigger: GTGGGGAAGACCGTCGACCAAAGGTGGGAAAGACAG...ATGCATAGTGACCTCCGAGGAGACAGTCATGTCACAGCAGAACGGCAGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CAA 90 bp AAGGCGTCCAGGGGGTCTTTGAAGTACATGAGCCTGCGGTCATCCATGGTGAACTCCTGTCGCTCGTACTaGGCCCGGATCCACTGCTCT +
Preference number: 5 (lower is better)
Translates to: KASRGSLKYMSLRSSMVNSCRSY*ARIHCS
Trigger: AGAGCAGTGGATCCGGGCCAAGTACGAGCGACAGGA...GTTCACCATGGATGACCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CAA 90 bp GCGTCCAGGGGGTCTTTGAAGTACATGAGCCTGCGGTCATCCATGGTGAACCAGAGTTCCTGGAGAGCTTaGGCACCAGATCTGCGTCGC +
Preference number: 5 (lower is better)
Translates to: ASRGSLKYMSLRSSMVNQSSWRA*APDLRR
Trigger: GCGACGCAGATCTGGTGCCAAAGCTCTCCAGGAACT...CTGGTTCACCATGGATGACCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CAA 90 bp CTCTCGTTCTGTCAGCACAAACTTCCGGCTCAAAAACTGCCCGTTGTCCCGGCCAAGCCTTCCGTTTGCTaGGGCCCCGTCTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: LSFCQHKLPAQKLPVVPAKPSVC*GPVFSM
Trigger: CATGGAGAAGACGGGGCCCAAGCAAACGGAAGGCTT...GGCCGGGACAACGGGCAGTTTTTGAGCCGGAAGTTTGTGCTGACAGAACGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CAA 90 bp TTCCATCCACAGGTTTGGGCCCCGGCTGGCCTGACGCACTGGGTGGACATGGGCCCAGAAAATGACCCTTaGATTATGAAGCTACTTGGT +
Preference number: 5 (lower is better)
Translates to: FHPQVWAPAGLTHWVDMGPENDP*IMKLLG
Trigger: ACCAAGTAGCTTCATAATCAAAGGGTCATTTTCTGG...GCCCATGTCCACCCAGTGCGTCAGGCCAGCCGGGGCCCAAACCTGTGGATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CAA 90 bp CTCACGCCATATAGCCGCACTGCGTTGGCGAGCTCATGGCACGTGGCCACACCGGAAGTTCTGTCAGTTTaGCTGTCACATCTCAGACTT +
Preference number: 5 (lower is better)
Translates to: LTPYSRTALASSWHVATPEVLSV*LSHLRL
Trigger: AAGTCTGAGATGTGACAGCAAAACTGACAGAACTTC...CGGTGTGGCCACGTGCCATGAGCTCGCCAACGCAGTGCGGCTATATGGCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CAA 90 bp TCGCCTCCCTCCCAGCTTTGCCGGGAACGCCGTCCCACTCAGGGGTTCAATGCAACCATTCATGAGTTTTaGATTCTGTGCTGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: SPPSQLCRERRPTQGFNATIHEF*ILCCSE
Trigger: CTCAGAACAGCACAGAATCAAAAACTCATGAATGGT...TGCATTGAACCCCTGAGTGGGACGGCGTTCCCGGCAAAGCTGGGAGGGAGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CAA 90 bp AATCTCCTTCCCGTCCTCATGGTAGATGAAGATGTTACGGGTGCTGTTGTCCTTCGCGGCTGGAAGCTCTaGGTCCCGAAATTCATGGCG +
Preference number: 5 (lower is better)
Translates to: NLLPVLMVDEDVTGAVVLRGWKL*VPKFMA
Trigger: CGCCATGAATTTCGGGACCAAGAGCTTCCAGCCGCG...AAGGACAACAGCACCCGTAACATCTTCATCTACCATGAGGACGGGAAGGAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CAA 90 bp ACCAGAAAGAATCAAGAAGTCAATCCATCCAAAGCCAGAAGGTTCTCACTTCCTCAGGGTCCGGCTCTGTaGCTCAGGCTGGAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: TRKNQEVNPSKARRFSLPQGPAL*LRLESS
Trigger: ACTGCTCTCCAGCCTGAGCAACAGAGCCGGACCCTG...AGGAAGTGAGAACCTTCTGGCTTTGGATGGATTGACTTCTTGATTCTTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CAA 90 bp GGCGTCCAGGGGGTCTTTGAAGTACATGAGCCTGCGGTCATCCATGGTGAACCATTGGCATCATTTCTGTaGAAATACTTCAGAGCACCC +
Preference number: 5 (lower is better)
Translates to: GVQGVFEVHEPAVIHGEPLASFL*KYFRAP
Trigger: GGGTGCTCTGAAGTATTTCAACAGAAATGATGCCAA...TGGTTCACCATGGATGACCGCAGGCTCATGTACTTCAAAGACCCCCTGGACGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CAA 90 bp ACCAGAAAGAATCAAGAAGTCAATCCATCCAAAGCCAGAAGGTTCTCACTTCCTCGTCGGCATGGTCTGTaGTGTTCCCCTCACATCCTG +
Preference number: 5 (lower is better)
Translates to: TRKNQEVNPSKARRFSLPRRHGL*CSPHIL
Trigger: CAGGATGTGAGGGGAACACAACAGACCATGCCGACG...AGGAAGTGAGAACCTTCTGGCTTTGGATGGATTGACTTCTTGATTCTTTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS-3UTR CAA 90 bp TCATTTCTGTTGAAATACTTCAGAGCACCCTCTCGTTCTGTCAGCACAAACTTCATCTTCATCACGGCCTaGGGCTCCTTGGCATCATTT +
Preference number: 5 (lower is better)
Translates to: SFLLKYFRAPSRSVSTNFIFITA*GSLASF
Trigger: AAATGATGCCAAGGAGCCCAAGGCCGTGATGAAGAT...GAAGTTTGTGCTGACAGAACGAGAGGGTGCTCTGAAGTATTTCAACAGAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS-3UTR CAA 90 bp AAGGAAATGAACTGGCATATACGAATACAAACACGAAAACATCCTGCTAGGGAAATTCAGGCCATGCAGTaGGGCAAGAGAACCAGAGGT +
Preference number: 5 (lower is better)
Translates to: KEMNWHIRIQTRKHPAREIQAMQ*GKRTRG
Trigger: ACCTCTGGTTCTCTTGCCCAACTGCATGGCCTGAAT...TTCCCTAGCAGGATGTTTTCGTGTTTGTATTCGTATATGCCAGTTCATTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS TCA 90 bp AGAATGCAAAAGAAAGAAACTGTGTACCCACGACCTTCGGTCTTTTaGCTCAGTCAGCATTATGATGCACGATTTGGAAACCTTAATGAC +
Preference number: 5 (lower is better)
Translates to: RMQKKETVYPRPSVF*LSQHYDARFGNLND
Trigger: GTCATTAAGGTTTCCAAATCGTGCATCATAATGCTGACTGAGTCAAAAGACCGAAGGTCGTGGGTACACAGTTTCTTTCTTTTGCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466146.1
CDS-3UTR CAA 90 bp GAATCAAGAAGTCAATCCATCCAAAGCCAGAAGGTTCTCACTTCCTACTTTGTGTCTATCCAGTTACCTTaGTACGTTAGAAAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: ESRSQSIQSQKVLTSYFVSIQLP*YVRKAG
Trigger: TCCTGCTTTTCTAACGTACAAAGGTAACTGGATAGA...CACAAAGTAGGAAGTGAGAACCTTCTGGCTTTGGATGGATTGACTTCTTGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344111.4
CDS CCA 72 bp TCCAGCGGGAAGCTGCCCTTGTCCGGGGGCCGCGGCTaGAAGCTCTTGGTCCCGAAATTCATGGCGGTCGAC +
Preference number: 6 (lower is better)
Translates to: SSGKLPLSGGRG*KLLVPKFMAVD
Trigger: GTCGACCGCCATGAATTTCGGGACCAAGAGCTTCCAGCCGCGGCCCCCGGACAAGGGCAGCTTCCCGCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344111.4
ENST00000457254.5
ENST00000466146.1
CDS CAA 90 bp TCCAGCGGGAAGCTGCCCTTGTCCGGGGGCCGCGGCTGGAAGCTCTaGGTCCCGAAATTCATGGCGGTCGACATGTTGGCGACTCCGGAG +
Preference number: 6 (lower is better)
Translates to: SSGKLPLSGGRGWKL*VPKFMAVDMLATPE
Trigger: CTCCGGAGTCGCCAACATGTCGACCGCCATGAATTTCGGGACCAAGAGCTTCCAGCCGCGGCCCCCGGACAAGGGCAGCTTCCCGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344111.4
ENST00000457254.5
ENST00000466146.1
CDS CAA 72 bp GCCTCCTCCCAGGCGTCCAGGCGGACGGACTTCACCTaGCTGACCTGGGGGATATTCCGGTGGATTCCCGAG +
Preference number: 6 (lower is better)
Translates to: ASSQASRRTDFT*LTWGIFRWIPE
Trigger: CTCGGGAATCCACCGGAATATCCCCCAGGTCAGCAAGGTGAAGTCCGTCCGCCTGGACGCCTGGGAGGAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS CAA 90 bp TCCACTTGGGCCTCCTCCCAGGCGTCCAGGCGGACGGACTTCACCTaGCTGACCTGGGGGATATTCCGGTGGATTCCCGAGCAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: STWASSQASRRTDFT*LTWGIFRWIPEQLR
Trigger: CCTGAGCTGCTCGGGAATCCACCGGAATATCCCCCAGGTCAGCAAGGTGAAGTCCGTCCGCCTGGACGCCTGGGAGGAGGCCCAAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457254.5
CDS CCA 72 bp GGGGCCGCGGCTGGAAGCTCTTGGTCCCGAAATTCATaGCGGTCGACATGTTGGCGACTCCGGAGTCTGCGA +
Preference number: 6 (lower is better)
Translates to: GAAAGSSWSRNS*RSTCWRLRSLR
Trigger: TCGCAGACTCCGGAGTCGCCAACATGTCGACCGCCATGAATTTCGGGACCAAGAGCTTCCAGCCGCGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344111.4
ENST00000457254.5
ENST00000466146.1
CDS CCA 72 bp AGCTGCCCTTGTCCGGGGGCCGCGGCTGGAAGCTCTTaGTCCCGAAATTCATGGCGGTCGACATGTTGGCGA +
Preference number: 6 (lower is better)
Translates to: SCPCPGAAAGSS*SRNSWRSTCWR
Trigger: TCGCCAACATGTCGACCGCCATGAATTTCGGGACCAAGAGCTTCCAGCCGCGGCCCCCGGACAAGGGCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344111.4
ENST00000457254.5
ENST00000466146.1
CDS CAA 72 bp AAGCTGCCCTTGTCCGGGGGCCGCGGCTGGAAGCTCTaGGTCCCGAAATTCATGGCGGTCGACATGTTGGCG +
Preference number: 6 (lower is better)
Translates to: KLPLSGGRGWKL*VPKFMAVDMLA
Trigger: CGCCAACATGTCGACCGCCATGAATTTCGGGACCAAGAGCTTCCAGCCGCGGCCCCCGGACAAGGGCAGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344111.4
ENST00000457254.5
ENST00000466146.1
CDS CCA 72 bp AGCTCTTGGTCCCGAAATTCATGGCGGTCGACATGTTaGCGACTCCGGAGTCTGCGAGCGCCTTGCGAGCGT +
Preference number: 6 (lower is better)
Translates to: SSWSRNSWRSTC*RLRSLRAPCER
Trigger: ACGCTCGCAAGGCGCTCGCAGACTCCGGAGTCGCCAACATGTCGACCGCCATGAATTTCGGGACCAAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344111.4
ENST00000457254.5
ENST00000466146.1
CDS CAA 72 bp AAGCTCTTGGTCCCGAAATTCATGGCGGTCGACATGTaGGCGACTCCGGAGTCTGCGAGCGCCTTGCGAGCG +
Preference number: 6 (lower is better)
Translates to: KLLVPKFMAVDM*ATPESASALRA
Trigger: CGCTCGCAAGGCGCTCGCAGACTCCGGAGTCGCCAACATGTCGACCGCCATGAATTTCGGGACCAAGAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344111.4
ENST00000457254.5
ENST00000466146.1
CDS GCA 72 bp AGCTTTTACATTCACCTAAGTGATCCAGCGGGAAGCTaGCCTTGTCCGGGGGCCGCGGCTGGAAGCTCTTGG +
Preference number: 6 (lower is better)
Translates to: SFYIHLSDPAGS*PCPGAAAGSSW
Trigger: CCAAGAGCTTCCAGCCGCGGCCCCCGGACAAGGGCAGCTTCCCGCTGGATCACTTAGGTGAATGTAAAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344111.4
ENST00000457254.5
ENST00000466146.1
CDS CAA 90 bp CCCCACCGGAATACGGCCAGAAGCACTGGGAGATCAGCAGCACTTTaGAGCTTTGCAGCAGACATCGCTAGGCACCGTCTAAGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: PHRNTARSTGRSAAL*SFAADIARHRLSLG
Trigger: GCCGAGGCTTAGACGGTGCCTAGCGATGTCTGCTGCAAAGCTCAAAAGTGCTGCTGATCTCCCAGTGCTTCTGGCCGTATTCCGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466853.1
CDS TCA 72 bp AGAGGCAGGATGATGCCCTCCGTCCTGAGAGACCACTaGACACGGCCCAGGGGTCTTCTCATCAAAATTCAT +
Preference number: 6 (lower is better)
Translates to: RGRMMPSVLRDH*TRPRGLLIKIH
Trigger: ATGAATTTTGATGAGAAGACCCCTGGGCCGTGTTCAGTGGTCTCTCAGGACGGAGGGCATCATCCTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344111.4