Pregenerated sensors for COX16 (Homo sapiens)
Ensembl gene IDs: ENSG00000133983Ensembl transcript IDs: ENST00000389912.7
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTGGAGAGTGGAATACGTaGCTCTGTTTTTGGAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: LCEALQRKSRLLADCDHFGEWNT*LCFWSS Trigger: ACTGCTCCAAAAACAGAGTCACGTATTCCACTCTCC...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| 3UTR-3UTR CCA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTGAATATGTGGGTAGTTaGAGAGTGGAATACGTGACT | + |
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Preference number: 2 (lower is better) Translates to: LCEALQRKSRLLADCDHFEYVGS*RVEYVT Trigger: AGTCACGTATTCCACTCTCCAACTACCCACATATTC...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| 3UTR-3UTR GCA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTTGCCCTAATGGCTATTaGAAAAGGAATATGTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: LCEALQRKSRLLADCDHFCPNGY*KRNMWV Trigger: TACCCACATATTCCTTTTGCAATAGCCATTAGGGCA...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| 3UTR-3UTR CCA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTTTTACTGTGAGAATTTaGATCCAGACCTACTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LCEALQRKSRLLADCDHFFTVRI*IQTYCP Trigger: AGGACAGTAGGTCTGGATCCAAATTCTCACAGTAAA...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| 3UTR-3UTR CAA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTTTTTACTGTGAGAATTaGGATCCAGACCTACTGTCC | + |
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Preference number: 3 (lower is better) Translates to: LCEALQRKSRLLADCDHFFYCEN*DPDLLS Trigger: GGACAGTAGGTCTGGATCCAAATTCTCACAGTAAAA...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 38% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| 3UTR-3UTR CAA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTTATACGTGGCCAACATaGTTACTTTCATCCACAGAT | + |
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Preference number: 3 (lower is better) Translates to: LCEALQRKSRLLADCDHFYTWPT*LLSSTD Trigger: ATCTGTGGATGAAAGTAACAATGTTGGCCACGTATA...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| 3UTR TCA 72 bp | TCATGTGATGCTTTGGAGACTGATTATCATACTATGTaGGGCATTACAAAGAAAATCAAGACTCTTAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: SCDALETDYHTM*GITKKIKTLSR Trigger: TCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAGTATGATAATCAGTCTCCAAAGCATCACATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| CDS-3UTR GCA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTCAGAGATCGTGCCCCTaGACTCCAGCCTGGGCGAAC | + |
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Preference number: 4 (lower is better) Translates to: LCEALQRKSRLLADCDHFQRSCP*TPAWAN Trigger: GTTCGCCCAGGCTGGAGTGCAGGGGCACGATCTCTG...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| CDS-3UTR TCA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTCCGCGGGTGCAAACATaGGTGAACTCTTCCATCGGC | + |
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Preference number: 4 (lower is better) Translates to: LCEALQRKSRLLADCDHFPRVQT*VNSSIG Trigger: GCCGATGGAAGAGTTCACTCATGTTTGCACCCGCGG...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| CDS-3UTR TCA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTAAGCAGAGCTTGCAGTaGGCAGAGATCGTGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LCEALQRKSRLLADCDHFKQSLQ*AEIVPL Trigger: CAGGGGCACGATCTCTGCTCACTGCAAGCTCTGCTT...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| CDS-3UTR GCA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTCCGGGAAGCAGAGCTTaGAGTGAGCAGAGATCGTGC | + |
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Preference number: 4 (lower is better) Translates to: LCEALQRKSRLLADCDHFPGSRA*SEQRSC Trigger: GCACGATCTCTGCTCACTGCAAGCTCTGCTTCCCGG...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| CDS-3UTR CCA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTGCTGAGGCAGGAGAATaGTGTGAACCCGGGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LCEALQRKSRLLADCDHFAEAGE*CEPGKQ Trigger: CTGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGC...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| CDS-3UTR TCA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTGGGTGCAAACATGAGTaGACTCTTCCATCGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LCEALQRKSRLLADCDHFGCKHE*TLPSAQ Trigger: CTGAGCCGATGGAAGAGTTCACTCATGTTTGCACCC...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| CDS-3UTR CCA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTGATCTTCCCAAGGCCTaGGTCCTCGAATATTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LCEALQRKSRLLADCDHFDLPKA*VLEYSS Trigger: GGAAGAATATTCGAGGACCCAGGCCTTGGGAAGATC...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| CDS-3UTR CCA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTAGTCTTAAGGCTTTCTaGATTTCTTCCTTGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LCEALQRKSRLLADCDHFSLKAF*ISSLEE Trigger: CTCCTCCAAGGAAGAAATCCAGAAAGCCTTAAGACT...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| CDS-3UTR TCA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTCAAACTTGGAGTCTTTaGTTTTCTCATATTCCGACT | + |
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Preference number: 4 (lower is better) Translates to: LCEALQRKSRLLADCDHFQTWSL*FSHIPT Trigger: AGTCGGAATATGAGAAAATCAAAGACTCCAAGTTTG...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| CDS-3UTR CAA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTTCAAACTTGGAGTCTTaGATTTTCTCATATTCCGAC | + |
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Preference number: 5 (lower is better) Translates to: LCEALQRKSRLLADCDHFSNLES*IFSYSD Trigger: GTCGGAATATGAGAAAATCAAAGACTCCAAGTTTGA...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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| CDS-3UTR CAA 90 bp | CTATGTGAGGCATTACAAAGAAAATCAAGACTCTTAGCAGACTGTGATCATTTTTTCCAGTCATCAAACTaGGAGTCTTTGATTTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: LCEALQRKSRLLADCDHFFQSSN*ESLIFS Trigger: TGAGAAAATCAAAGACTCCAAGTTTGATGACTGGAA...AAAATGATCACAGTCTGCTAAGAGTCTTGATTTTCTTTGTAATGCCTCACATAG 36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000389912.7 |
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