RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COX15 (Homo sapiens)

Ensembl gene IDs: ENSG00000014919

Ensembl transcript IDs: ENST00000016171.6, ENST00000370483.9, ENST00000497381.1

Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACTTGGTATGTCAAGGTCATCTCGTAGAAAAGCCCAAGTTCTTATaGTCTCTGAAGAGCTCTCAAAAGCAGTCACAGTCCCAGGAGGCT +
Preference number: 1 (lower is better)
Translates to: HLVCQGHLVEKPKFL*SLKSSQKQSQSQEA
Trigger: AGCCTCCTGGGACTGTGACTGCTTTTGAGAGCTCTTCAGAGATCATAAGAACTTGGGCTTTTCTACGAGATGACCTTGACATACCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR CCA 90 bp CAGTGTTACTGTCTCCATCAGCCTGACCCCAGTGAGCATTTGATTTaGTCTACCCTACTCTTGCCTTCTACAGAACTAAAACTAACTTCC +
Preference number: 1 (lower is better)
Translates to: QCYCLHQPDPSEHLI*STLLLPSTELKLTS
Trigger: GGAAGTTAGTTTTAGTTCTGTAGAAGGCAAGAGTAGGGTAGACCAAATCAAATGCTCACTGGGGTCAGGCTGATGGAGACAGTAACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR TCA 90 bp ACCCTCTCAGGAACCAATTTATACTGTCGATTCCATTCCTCTCTCTaGCCTTGTAATGTTAACAGCCTTATCAAAAGAGGAACTAGCTGG +
Preference number: 1 (lower is better)
Translates to: TLSGTNLYCRFHSSL*PCNVNSLIKRGTSW
Trigger: CCAGCTAGTTCCTCTTTTGATAAGGCTGTTAACATTACAAGGTCAGAGAGAGGAATGGAATCGACAGTATAAATTGGTTCCTGAGAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR TCA 90 bp CTACAGGTCACAGAAACTTACAGAGTACTGGAGTTGAAAGAGAACTaGGATCACCTAGTTCAGAGACTAACGGGAAACGTTAGGTCATTT +
Preference number: 1 (lower is better)
Translates to: LQVTETYRVLELKEN*DHLVQRLTGNVRSF
Trigger: AAATGACCTAACGTTTCCCGTTAGTCTCTGAACTAGGTGATCTCAGTTCTCTTTCAACTCCAGTACTCTGTAAGTTTCTGTGACCTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR TCA 90 bp TTCCAGGCTCTTTTAAACAACCAGCTCTTGCATAAACAACCAGAGTaGGAACTCACTCATTACTATGGGGATGGCACAAAGTCATACATA +
Preference number: 1 (lower is better)
Translates to: FQALLNNQLLHKQPE*ELTHYYGDGTKSYI
Trigger: TATGTATGACTTTGTGCCATCCCCATAGTAATGAGTGAGTTCTCACTCTGGTTGTTTATGCAAGAGCTGGTTGTTTAAAAGAGCCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR TCA 90 bp TTGAGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTCGGGAGGCTGAGGCATaGGAATCGCTTGAACCTGGG +
Preference number: 2 (lower is better)
Translates to: LRIRRGWCGNLPQELQFPREAEA*ESLEPG
Trigger: CCCAGGTTCAAGCGATTCTCATGCCTCAGCCTCCCG...AGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR-3UTR CCA 90 bp AGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTTTCAAAAGAGGAACTAGCTaGGCGTGGTGGCCCATGCCT +
Preference number: 2 (lower is better)
Translates to: RIRRGWCGNLPQELQFPFKRGTS*AWWPMP
Trigger: AGGCATGGGCCACCACGCCCAGCTAGTTCCTCTTTT...GAAAGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR-3UTR GCA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCGCTCATTCCCTCTTCTaGATGAGACGGCTTCAACTT +
Preference number: 2 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSAHSLF*MRRLQL
Trigger: AAGTTGAAGCCGTCTCATGCAGAAGAGGGAATGAGC...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR CCA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCTCGATGGGGTCATTCTaGGACTGTTTTCAGTTGCCA +
Preference number: 2 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSSMGSF*DCFQLP
Trigger: TGGCAACTGAAAACAGTCCCAGAATGACCCCATCGA...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR TCA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCAACCATATCACCACCTaGGAATGGTACACTACAGGT +
Preference number: 2 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSNHITT*EWYTTG
Trigger: ACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTT...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR CCA 90 bp AGCATGGCGCTGGCATCTGCTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGCATTTGGAAACCACTTaGTATGTCAAGGTCATCTCG +
Preference number: 2 (lower is better)
Translates to: SMALASASGEGLTKLTIMHLETT*YVKVIS
Trigger: CGAGATGACCTTGACATACCAAGTGGTTTCCAAATG...CATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCCAGCGCCATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR-3UTR CCA 90 bp AGCATGGCGCTGGCATCTGCTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGTTAATTTCATCTCGATaGGGTCATTCTGGGACTGTT +
Preference number: 2 (lower is better)
Translates to: SMALASASGEGLTKLTIMLISSR*GHSGTV
Trigger: AACAGTCCCAGAATGACCCCATCGAGATGAAATTAA...CATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCCAGCGCCATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR CAA 90 bp GCTCGCCAGTGTTACTGTCTCCATCAGCCTGACCCCAGTGAGCATTaGATTTGGTCTACCCTACTCTTGCCTTCTACAGAACTAAAACTA +
Preference number: 2 (lower is better)
Translates to: ARQCYCLHQPDPSEH*IWSTLLLPSTELKL
Trigger: TAGTTTTAGTTCTGTAGAAGGCAAGAGTAGGGTAGACCAAATCAAATGCTCACTGGGGTCAGGCTGATGGAGACAGTAACACTGGCGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR TCA 90 bp AGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTTTCGCATTCTTGATCCAGTaGCTATCTCAAAACAGGAAA +
Preference number: 2 (lower is better)
Translates to: RIRRGWCGNLPQELQFPFAFLIQ*LSQNRK
Trigger: TTTCCTGTTTTGAGATAGTCACTGGATCAAGAATGC...GAAAGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR-3UTR TCA 90 bp TCAGAACTTTCTAAGGTAACTAGGCTATTAGGACCTAAGCCAGTGGTCCCTAGAGCCCGGCCAATGTGGTaGAACCCCTTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: SELSKVTRLLGPKPVVPRARPMW*NPFSTK
Trigger: TTTAGTAGAGAAGGGGTTTCACCACATTGGCCGGGC...TCTAGGGACCACTGGCTTAGGTCCTAATAGCCTAGTTACCTTAGAAAGTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR-3UTR GCA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCGGGACTGTTTTCAGTTaGCACTGTCATCTATTATAT +
Preference number: 2 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSGTVFS*HCHLLY
Trigger: ATATAATAGATGACAGTGGCAACTGAAAACAGTCCC...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR GCA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCCTAAAACTAACTTCCTaGAACTTTCATCCATTGCTG +
Preference number: 2 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSLKLTS*NFHPLL
Trigger: CAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAG...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR TCA 90 bp AACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATAGTAAGCCCAAGTTCTTATaGTCTCTGAAGAGCTCTCAA +
Preference number: 2 (lower is better)
Translates to: NNPGPVEWQQQTRTQQYSKPKFL*SLKSSQ
Trigger: TTGAGAGCTCTTCAGAGATCATAAGAACTTGGGCTT...ACTATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR-3UTR GCA 90 bp TTGAGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTTGGCCATCAATATCTTaGTTAAATTTGGTACCCAGA +
Preference number: 2 (lower is better)
Translates to: LRIRRGWCGNLPQELQFPWPSIS*LNLVPR
Trigger: TCTGGGTACCAAATTTAAGCAAGATATTGATGGCCA...AGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR CAA 90 bp CATCAGCCTGACCCCAGTGAGCATTTGATTTGGTCTACCCTACTCTaGCCTTCTACAGAACTAAAACTAACTTCCTGCAACTTTCATCCA +
Preference number: 2 (lower is better)
Translates to: HQPDPSEHLIWSTLL*PSTELKLTSCNFHP
Trigger: TGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAGAGTAGGGTAGACCAAATCAAATGCTCACTGGGGTCAGGCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR TCA 90 bp CCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGTACCTGGACTCATCATTCTaGTCTCTTCTTCTGGATACA +
Preference number: 2 (lower is better)
Translates to: PYHHLRMVHYRSQKLTEYLDSSF*SLLLDT
Trigger: TGTATCCAGAAGAAGAGATCAGAATGATGAGTCCAG...GTACTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR GCA 90 bp TCTAACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATAAGCTTGTCAAAATCTaGAATTTCCCCATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: SNNPGPVEWQQQTRTQQYKLVKI*NFPISE
Trigger: TTCAGAAATGGGGAAATTGCAGATTTTGACAAGCTT...ATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR-3UTR CCA 90 bp CTTGCCTTCTACAGAACTAAAACTAACTTCCTGCAACTTTCATCCATTGCTGCCTTGCTGAAGACCAGCTaGCTACTTTGGGTATGTCAA +
Preference number: 2 (lower is better)
Translates to: LAFYRTKTNFLQLSSIAALLKTS*LLWVCQ
Trigger: TTGACATACCCAAAGTAGCCAGCTGGTCTTCAGCAA...GGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR-3UTR TCA 90 bp CCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGTACCAAATCAGATGTTTCTaGTGCCTTCATCCAAATCAC +
Preference number: 2 (lower is better)
Translates to: PYHHLRMVHYRSQKLTEYQIRCF*CLHPNH
Trigger: GTGATTTGGATGAAGGCATCAGAAACATCTGATTTG...GTACTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR CAA 90 bp CTGTTTAATTTCATCTCGATGGGGTCATTCTGGGACTGTTTTCAGTaGCCACTGTCATCTATTATATTAGCAATATTGGGTTGCTCCATC +
Preference number: 2 (lower is better)
Translates to: LFNFISMGSFWDCFQ*PLSSIILAILGCSI
Trigger: GATGGAGCAACCCAATATTGCTAATATAATAGATGACAGTGGCAACTGAAAACAGTCCCAGAATGACCCCATCGAGATGAAATTAAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR TCA 90 bp CTTGCCTTCTACAGAACTAAAACTAACTTCCTGCAACTTTCATCCATTGCTGCCCACTTAATGCATTCTTaGTCCAGTGACTATCTCAAA +
Preference number: 2 (lower is better)
Translates to: LAFYRTKTNFLQLSSIAAHLMHS*SSDYLK
Trigger: TTTGAGATAGTCACTGGATCAAGAATGCATTAAGTG...GGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR-3UTR CCA 90 bp CTTGCCTTCTACAGAACTAAAACTAACTTCCTGCAACTTTCATCCATTGCTGCCAGTAAGTTGACCATTTaGAAACCACTTGGTATGTCA +
Preference number: 2 (lower is better)
Translates to: LAFYRTKTNFLQLSSIAASKLTI*KPLGMS
Trigger: TGACATACCAAGTGGTTTCCAAATGGTCAACTTACT...GGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR CAA 90 bp AATATCAATAGAGACCAAAATCACATTAATTCAGCAGTCAACAATTaGTTTATCTGGGTAGATGTCCATGCACTACACCATCAAGGCCAT +
Preference number: 2 (lower is better)
Translates to: NINRDQNHINSAVNN*FIWVDVHALHHQGH
Trigger: ATGGCCTTGATGGTGTAGTGCATGGACATCTACCCAGATAAACAAATTGTTGACTGCTGAATTAATGTGATTTTGGTCTCTATTGATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR TCA 72 bp TGGCAGAAGGTGAAGGGGAGCCAGTGTGTCACATGGTaGGAGAGAGCAAGCGAGAGAGGAGGAAGTTCCAGG +
Preference number: 3 (lower is better)
Translates to: WQKVKGSQCVTW*ERASERGGSSR
Trigger: CCTGGAACTTCCTCCTCTCTCGCTTGCTCTCTCTCACCATGTGACACACTGGCTCCCCTTCACCTTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR CAA 90 bp TTGAGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTGCTGAGATCACGCCATaGTACTCCAGCCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: LRIRRGWCGNLPQELQFPAEITP*YSSLGN
Trigger: GTTGCCCAGGCTGGAGTACAATGGCGTGATCTCAGC...AGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR CCA 72 bp CTGCTTCTGGTGAGGGCCTCACGAAGCTTACAATCATaGCAGAAGGTGAAGGGGAGCCAGTGTGTCACATGG +
Preference number: 3 (lower is better)
Translates to: LLLVRASRSLQS*QKVKGSQCVTW
Trigger: CCATGTGACACACTGGCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR CAA 90 bp CTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCCAGGACCAGCTGGCTACTTaGGGTATGTCAATCCTATCC +
Preference number: 3 (lower is better)
Translates to: LVRASRSLQSWQKVKGSQDQLAT*GMSILS
Trigger: GGATAGGATTGACATACCCAAAGTAGCCAGCTGGTC...CTGGCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR TCA 72 bp CTGTATAGGAAGCATGGCGCTGGCATCTGCTTCTGGTaGGGGCCTCACGAAGCTTACAATCATGGCAGAAGG +
Preference number: 3 (lower is better)
Translates to: LYRKHGAGICFW*GPHEAYNHGRR
Trigger: CCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCCAGCGCCATGCTTCCTATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR CCA 72 bp ACTAAGGACAACCTGGGTTTGAGGATCAGGAGAGGATaGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCT +
Preference number: 3 (lower is better)
Translates to: TKDNLGLRIRRG*CGNLPQELQFP
Trigger: AGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCTCAAACCCAGGTTGTCCTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR-3UTR CAA 90 bp AGAGAGAGCAAGCGAGAGAGGAGGAAGTTCCAGGCTCTTTTAAACAACCAGCTCCCTGGGAAGTGGAGGTaGCAGAGTGAGCTGAGATCA +
Preference number: 3 (lower is better)
Translates to: RESKRERRKFQALLNNQLPGKWR*QSELRS
Trigger: TGATCTCAGCTCACTCTGCAACCTCCACTTCCCAGG...GAGCTGGTTGTTTAAAAGAGCCTGGAACTTCCTCCTCTCTCGCTTGCTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR-3UTR CAA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCACTGAATGTCACACTTaGAACATGAGATTTGGAGGG +
Preference number: 3 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSTECHT*NMRFGG
Trigger: CCCTCCAAATCTCATGTTCAAAGTGTGACATTCAGT...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR CAA 90 bp AGCATGGCGCTGGCATCTGCTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGTGGGACTGTTTTCAGTaGCCACTGTCATCTATTATA +
Preference number: 3 (lower is better)
Translates to: SMALASASGEGLTKLTIMWDCFQ*PLSSII
Trigger: TATAATAGATGACAGTGGCAACTGAAAACAGTCCCA...CATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCCAGCGCCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR CAA 90 bp CTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCCAGACTACTTGGTTCATATaGAACCTGAGGACAACTAAA +
Preference number: 3 (lower is better)
Translates to: LVRASRSLQSWQKVKGSQTTWFI*NLRTTK
Trigger: TTTAGTTGTCCTCAGGTTCAATATGAACCAAGTAGT...CTGGCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR CAA 90 bp TTGAGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTACTGAATGTCACACTTaGAACATGAGATTTGGAGGG +
Preference number: 3 (lower is better)
Translates to: LRIRRGWCGNLPQELQFPTECHT*NMRFGG
Trigger: CCCTCCAAATCTCATGTTCAAAGTGTGACATTCAGT...AGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR GCA 72 bp CAGCTCTGCAGCATAATGGAAGCTCATTCCCTCTTCTaGATGAGACGGCTTCAACTTCTCAAGGACAGGAAT +
Preference number: 3 (lower is better)
Translates to: QLCSIMEAHSLF*MRRLQLLKDRN
Trigger: ATTCCTGTCCTTGAGAAGTTGAAGCCGTCTCATGCAGAAGAGGGAATGAGCTTCCATTATGCTGCAGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR CAA 90 bp CCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGTACGACCCCAGTGAGCATTaGATTTGGTCTACCCTACTC +
Preference number: 3 (lower is better)
Translates to: PYHHLRMVHYRSQKLTEYDPSEH*IWSTLL
Trigger: GAGTAGGGTAGACCAAATCAAATGCTCACTGGGGTC...GTACTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR CAA 90 bp GAACTCACTCATTACTATGGGGATGGCACAAAGTCATACATAAGGGATCCGCCCTCAGCAGTCAACAATTaGTTTATCTGGGTAGATGTC +
Preference number: 3 (lower is better)
Translates to: ELTHYYGDGTKSYIRDPPSAVNN*FIWVDV
Trigger: GACATCTACCCAGATAAACAAATTGTTGACTGCTGA...GGGCGGATCCCTTATGTATGACTTTGTGCCATCCCCATAGTAATGAGTGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR TCA 72 bp TGTCAAGGTCATCTCGTAGAAAAGCCCAAGTTCTTATaGTCTCTGAAGAGCTCTCAAAAGCAGTCACAGTCC +
Preference number: 3 (lower is better)
Translates to: CQGHLVEKPKFL*SLKSSQKQSQS
Trigger: GGACTGTGACTGCTTTTGAGAGCTCTTCAGAGATCATAAGAACTTGGGCTTTTCTACGAGATGACCTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR GCA 72 bp CTACTCTTGCCTTCTACAGAACTAAAACTAACTTCCTaGAACTTTCATCCATTGCTGCCAGCTCTGCAGCAT +
Preference number: 3 (lower is better)
Translates to: LLLPSTELKLTS*NFHPLLPALQH
Trigger: ATGCTGCAGAGCTGGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR CCA 72 bp GCAACTGTAGAAGCATTAATATATGGTTCTTTGGGTTaGGTCATACTGCCCTCTGCTGACTCAGTTACTAAC +
Preference number: 3 (lower is better)
Translates to: ATVEALIYGSLG*VILPSADSVTN
Trigger: GTTAGTAACTGAGTCAGCAGAGGGCAGTATGACCCAACCCAAAGAACCATATATTAATGCTTCTACAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR GCA 72 bp TTTAGAAAGAAAAGAGGTTTATTTGGCTCACTGTTCTaGATAGAACTGTATAGGAAGCATGGCGCTGGCATC +
Preference number: 3 (lower is better)
Translates to: FRKKRGLFGSLF*IELYRKHGAGI
Trigger: GATGCCAGCGCCATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTTTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR-3UTR CAA 90 bp CCATCCTCAAATCAGATGTTTCTGATGCCTTCATCCAAATCACTGATTTTAAAACCATTTGGAAACCACTaGGTATGTCAAGGTCATCTC +
Preference number: 3 (lower is better)
Translates to: PSSNQMFLMPSSKSLILKPFGNH*VCQGHL
Trigger: GAGATGACCTTGACATACCAAGTGGTTTCCAAATGG...TTTTAAAATCAGTGATTTGGATGAAGGCATCAGAAACATCTGATTTGAGGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR CCA 72 bp AATCACATTAATTCAGCAGTCAACAATTTGTTTATCTaGGTAGATGTCCATGCACTACACCATCAAGGCCAT +
Preference number: 3 (lower is better)
Translates to: NHINSAVNNLFI*VDVHALHHQGH
Trigger: ATGGCCTTGATGGTGTAGTGCATGGACATCTACCCAGATAAACAAATTGTTGACTGCTGAATTAATGTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR-3UTR CAA 90 bp AAGAAAAGAGGTTTATTTGGCTCACTGTTCTGCATAGAACTGTATAGGAAGCATTGGGACTGTTTTCAGTaGCCACTGTCATCTATTATA +
Preference number: 3 (lower is better)
Translates to: KKRGLFGSLFCIELYRKHWDCFQ*PLSSII
Trigger: TATAATAGATGACAGTGGCAACTGAAAACAGTCCCA...ATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp TCCGAGCTGGGGCACCTGCTCGCCAGTGTTACTGTCTCCATCAGCCTGACCCCACAACCCAGGGCTCTGTaGTCTCCCTCCTCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: SELGHLLASVTVSISLTPQPRAL*SPSSAK
Trigger: CTTGGCGGAGGAGGGAGACCACAGAGCCCTGGGTTG...TGGGGTCAGGCTGATGGAGACAGTAACACTGGCGAGCAGGTGCCCCAGCTCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR GCA 90 bp TCCGAGCTGGGGCACCTGCTCGCCAGTGTTACTGTCTCCATCAGCCTGACCCCAAGGAGCGGCAGATACTaGCTCCCCTTCAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SELGHLLASVTVSISLTPRSGRY*LPFKAL
Trigger: GAGGGCCTTGAAGGGGAGGCAGTATCTGCCGCTCCT...TGGGGTCAGGCTGATGGAGACAGTAACACTGGCGAGCAGGTGCCCCAGCTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp TCCGAGCTGGGGCACCTGCTCGCCAGTGTTACTGTCTCCATCAGCCTGACCCCACCGAGCTGGGGCACCTaGTCGCCAGTGTTACTGTCT +
Preference number: 4 (lower is better)
Translates to: SELGHLLASVTVSISLTPPSWGT*SPVLLS
Trigger: AGACAGTAACACTGGCGAGCAGGTGCCCCAGCTCGG...TGGGGTCAGGCTGATGGAGACAGTAACACTGGCGAGCAGGTGCCCCAGCTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCGCAGCAAGGCGGTACTaGCTGACCCGAGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSAARRY*LTRGMS
Trigger: TGACATCCCTCGGGTCAGTCAGTACCGCCTTGCTGC...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp TTGAGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTCAAAGCCAAGGAGCCTaGCTGGTGAGTGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: LRIRRGWCGNLPQELQFPQSQGA*LVSGGQ
Trigger: CTGGCCGCCACTCACCAGTCAGGCTCCTTGGCTTTG...AGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp AGCATGGCGCTGGCATCTGCTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGGCATCTGCTTCTGGTaGGGGCCTCACGAAGCTTAC +
Preference number: 4 (lower is better)
Translates to: SMALASASGEGLTKLTIMGICFW*GPHEAY
Trigger: GTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCC...CATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCCAGCGCCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp AACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATAGTCTGTGCTCTAGGCGCTaGCCTAGGAGCCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: NNPGPVEWQQQTRTQQYSLCSRR*PRSQER
Trigger: CCGCTCCTGGCTCCTAGGGCAGCGCCTAGAGCACAG...ACTATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp TCCGAGCTGGGGCACCTGCTCGCCAGTGTTACTGTCTCCATCAGCCTGACCCCAAAGGAACACCAGACCTaGTGTTCCATGAGCAAATCG +
Preference number: 4 (lower is better)
Translates to: SELGHLLASVTVSISLTPKEHQT*CSMSKS
Trigger: CGATTTGCTCATGGAACAGCAGGTCTGGTGTTCCTT...TGGGGTCAGGCTGATGGAGACAGTAACACTGGCGAGCAGGTGCCCCAGCTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp AGCATGGCGCTGGCATCTGCTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGCTTTCATGCCACGGCTaGGCCAGCCCTTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SMALASASGEGLTKLTIMLSCHG*ASPFSK
Trigger: TTTGGAGAAAGGGCTGGCTCAGCCGTGGCATGAAAG...CATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCCAGCGCCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp AGCATGGCGCTGGCATCTGCTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGAGGATCAGGAGAGGATaGTGTGGGAACCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SMALASASGEGLTKLTIMRIRRG*CGNLPQ
Trigger: CTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCT...CATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCCAGCGCCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp AGAGAGAGCAAGCGAGAGAGGAGGAAGTTCCAGGCTCTTTTAAACAACCAGCTCAAGGAGCCTGACTGGTaGGTGGCGGCCAGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: RESKRERRKFQALLNNQLKEPDW*VAARGV
Trigger: AACTCCTCTGGCCGCCACTCACCAGTCAGGCTCCTT...GAGCTGGTTGTTTAAAAGAGCCTGGAACTTCCTCCTCTCTCGCTTGCTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp TCCGAGCTGGGGCACCTGCTCGCCAGTGTTACTGTCTCCATCAGCCTGACCCCACTGGACTCATCATTCTaGTCTCTTCTTCTGGATACA +
Preference number: 4 (lower is better)
Translates to: SELGHLLASVTVSISLTPLDSSF*SLLLDT
Trigger: TGTATCCAGAAGAAGAGATCAGAATGATGAGTCCAG...TGGGGTCAGGCTGATGGAGACAGTAACACTGGCGAGCAGGTGCCCCAGCTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp TCTAACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATAGGAGCGGCAGATACTaGCTCCCCTTCAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SNNPGPVEWQQQTRTQQYRSGRY*LPFKAL
Trigger: GAGGGCCTTGAAGGGGAGGCAGTATCTGCCGCTCCT...ATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp CTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCCAGGTGAGGTCCACAAGCTaGCACAATAAAGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: LVRASRSLQSWQKVKGSQVRSTS*HNKEPG
Trigger: CCCTGGTTCTTTATTGTGCCAGCTTGTGGACCTCAC...CTGGCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp AGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTTTCCAGGAGAGGATGGTGTaGGAACCTGCCTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: RIRRGWCGNLPQELQFPFQERMV*EPASGT
Trigger: AGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTG...GAAAGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp TCTAACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATGCCTCAAAGGGCGCCTaGTGCAATCACACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SNNPGPVEWQQQTRTQQYASKGA*CNHTVL
Trigger: GAGCACAGTGTGATTGCATCAGGCGCCCTTTGAGGC...ATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp GAACTCACTCATTACTATGGGGATGGCACAAAGTCATACATAAGGGATCCGCCCCCGCTCAGCAGCCTTTaGGGGAAGGGACACTGTACC +
Preference number: 4 (lower is better)
Translates to: ELTHYYGDGTKSYIRDPPPLSSL*GKGHCT
Trigger: GGTACAGTGTCCCTTCCCTCAAAGGCTGCTGAGCGG...GGGCGGATCCCTTATGTATGACTTTGTGCCATCCCCATAGTAATGAGTGAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp AGAGAGAGCAAGCGAGAGAGGAGGAAGTTCCAGGCTCTTTTAAACAACCAGCTCGGCATCTGCTTCTGGTaGGGGCCTCACGAAGCTTAC +
Preference number: 4 (lower is better)
Translates to: RESKRERRKFQALLNNQLGICFW*GPHEAY
Trigger: GTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCC...GAGCTGGTTGTTTAAAAGAGCCTGGAACTTCCTCCTCTCTCGCTTGCTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp TTGAGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTGTTTCAGGCAACTTGTaGGGAGGGAGTAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: LRIRRGWCGNLPQELQFPVSGNL*GGSSSD
Trigger: GTCACTGCTACTCCCTCCGCACAAGTTGCCTGAAAC...AGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp AACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATAGTGGTGCTGTATTGCCCTaGCCTCAAAGGGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: NNPGPVEWQQQTRTQQYSGAVLP*PQRAPD
Trigger: ATCAGGCGCCCTTTGAGGCCAGGGCAATACAGCACC...ACTATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCAAGCTACTTCAGAGATaGTGCTGTATTGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSKLLQR*CCIALA
Trigger: GGCCAGGGCAATACAGCACCATCTCTGAAGTAGCTT...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp AGAGAGAGCAAGCGAGAGAGGAGGAAGTTCCAGGCTCTTTTAAACAACCAGCTCCATCCCAACAGACCCTaGAAGCAGACGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RESKRERRKFQALLNNQLHPNRP*KQTRPQ
Trigger: CTGTGGCCTCGTCTGCTTCCAGGGTCTGTTGGGATG...GAGCTGGTTGTTTAAAAGAGCCTGGAACTTCCTCCTCTCTCGCTTGCTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp TCTAACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATCATCCCAACAGACCCTaGAAGCAGACGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SNNPGPVEWQQQTRTQQYHPNRP*KQTRPQ
Trigger: CTGTGGCCTCGTCTGCTTCCAGGGTCTGTTGGGATG...ATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp CTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCCAGAACTGTAGGAGTTGGTaGGTTTCAGGCAACTTGTGC +
Preference number: 4 (lower is better)
Translates to: LVRASRSLQSWQKVKGSQNCRSW*VSGNLC
Trigger: GCACAAGTTGCCTGAAACCCACCAACTCCTACAGTT...CTGGCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp AGAGAGAGCAAGCGAGAGAGGAGGAAGTTCCAGGCTCTTTTAAACAACCAGCTCGGCGGCCAGAGGAGTTaGGACATACATCAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: RESKRERRKFQALLNNQLGGQRS*DIHQQR
Trigger: ACGCTGCTGATGTATGTCCCAACTCCTCTGGCCGCC...GAGCTGGTTGTTTAAAAGAGCCTGGAACTTCCTCCTCTCTCGCTTGCTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp TCCGAGCTGGGGCACCTGCTCGCCAGTGTTACTGTCTCCATCAGCCTGACCCCACATAAACAACCAGAGTaGGAACTCACTCATTACTAT +
Preference number: 4 (lower is better)
Translates to: SELGHLLASVTVSISLTPHKQPE*ELTHYY
Trigger: ATAGTAATGAGTGAGTTCTCACTCTGGTTGTTTATG...TGGGGTCAGGCTGATGGAGACAGTAACACTGGCGAGCAGGTGCCCCAGCTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCTCCACCAAGAATAACTaGTCCAGCCACTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSSTKNN*SSHCST
Trigger: AGTGGAACAGTGGCTGGAGCAGTTATTCTTGGTGGA...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp TCCGAGCTGGGGCACCTGCTCGCCAGTGTTACTGTCTCCATCAGCCTGACCCCACTAAAACTAACTTCCTaGAACTTTCATCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: SELGHLLASVTVSISLTPLKLTS*NFHPLL
Trigger: CAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAG...TGGGGTCAGGCTGATGGAGACAGTAACACTGGCGAGCAGGTGCCCCAGCTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCAACTGTAGGAGTTGGTaGGTTTCAGGCAACTTGTGC +
Preference number: 4 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSNCRSW*VSGNLC
Trigger: GCACAAGTTGCCTGAAACCCACCAACTCCTACAGTT...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp AACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATAGTAATCATGGCAGAAGGTaGAGGGGAGCCAGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: NNPGPVEWQQQTRTQQYSNHGRR*RGASVS
Trigger: TGACACACTGGCTCCCCTTCACCTTCTGCCATGATT...ACTATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp AGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTTTCAAGGAACACCAGACCTaGTGTTCCATGAGCAAATCG +
Preference number: 4 (lower is better)
Translates to: RIRRGWCGNLPQELQFPFKEHQT*CSMSKS
Trigger: CGATTTGCTCATGGAACAGCAGGTCTGGTGTTCCTT...GAAAGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR GCA 90 bp AGAGAGAGCAAGCGAGAGAGGAGGAAGTTCCAGGCTCTTTTAAACAACCAGCTCAGCCAGCAGAGTCACTaGTGCCATCTTGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RESKRERRKFQALLNNQLSQQSH*CHLGPS
Trigger: AGAAGGACCAAGATGGCAGCAGTGACTCTGCTGGCT...GAGCTGGTTGTTTAAAAGAGCCTGGAACTTCCTCCTCTCTCGCTTGCTCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp AACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATAGTTTTGGGAAGCCGAGATaGGCGGATTACCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: NNPGPVEWQQQTRTQQYSFGKPR*ADYLRS
Trigger: TGACCTCAGGTAATCCGCCCATCTCGGCTTCCCAAA...ACTATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp AACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATAGTCCTGGACCTGTAGAGTaGCAGCAACAGACCAGAACT +
Preference number: 4 (lower is better)
Translates to: NNPGPVEWQQQTRTQQYSPGPVE*QQQTRT
Trigger: AGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGG...ACTATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp CTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCCAGACGTTAGGTCATTTATaGCTCTCAGACACGTTAAGC +
Preference number: 4 (lower is better)
Translates to: LVRASRSLQSWQKVKGSQTLGHL*LSDTLS
Trigger: GCTTAACGTGTCTGAGAGCCATAAATGACCTAACGT...CTGGCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR CAA 72 bp CTGCTGACTCAGTTACTAACTAAGGACAACCTGGGTTaGAGGATCAGGAGAGGATGGTGTGGGAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: LLTQLLTKDNLG*RIRRGWCGNLP
Trigger: AGGCAGGTTCCCACACCATCCTCTCCTGATCCTCAAACCCAGGTTGTCCTTAGTTAGTAACTGAGTCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp AAACCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGCCGCTCAGCAGCCTTTaGGGGAAGGGACACTGTACC +
Preference number: 4 (lower is better)
Translates to: KPYHHLRMVHYRSQKLTEPLSSL*GKGHCT
Trigger: GGTACAGTGTCCCTTCCCTCAAAGGCTGCTGAGCGG...CTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp CTTGCCTTCTACAGAACTAAAACTAACTTCCTGCAACTTTCATCCATTGCTGCCCAAGGCGGTACTGACTaGCCCGAGGGATGTCATGGG +
Preference number: 4 (lower is better)
Translates to: LAFYRTKTNFLQLSSIAAQGGTD*PEGCHG
Trigger: CCCATGACATCCCTCGGGTCAGTCAGTACCGCCTTG...GGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp AAACCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGCAAGGCGGTACTGACTaGCCCGAGGGATGTCATGGG +
Preference number: 4 (lower is better)
Translates to: KPYHHLRMVHYRSQKLTEQGGTD*PEGCHG
Trigger: CCCATGACATCCCTCGGGTCAGTCAGTACCGCCTTG...CTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCAAGCCCAAGTTCTTATaGTCTCTGAAGAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSKPKFL*SLKSSQ
Trigger: TTGAGAGCTCTTCAGAGATCATAAGAACTTGGGCTT...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp CTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCCAGGCATTCTTGATCCAGTaGCTATCTCAAAACAGGAAA +
Preference number: 4 (lower is better)
Translates to: LVRASRSLQSWQKVKGSQAFLIQ*LSQNRK
Trigger: TTTCCTGTTTTGAGATAGTCACTGGATCAAGAATGC...CTGGCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp TTGAGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTACAGAGTACTGGAGTTaGAAGAGAACTGAGATCACC +
Preference number: 4 (lower is better)
Translates to: LRIRRGWCGNLPQELQFPTEYWS*KRTEIT
Trigger: GGTGATCTCAGTTCTCTTTCAACTCCAGTACTCTGT...AGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp TTGAGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTAACCATATCACCACCTaGGAATGGTACACTACAGGT +
Preference number: 4 (lower is better)
Translates to: LRIRRGWCGNLPQELQFPNHITT*EWYTTG
Trigger: ACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTT...AGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR GCA 90 bp TTGAGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTGTACCCCTTCCAGATTaGAAAGCTACTTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: LRIRRGWCGNLPQELQFPVPLPD*KATSEM
Trigger: CATCTCTGAAGTAGCTTTGCAATCTGGAAGGGGTAC...AGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR GCA 90 bp AAACCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGCAGCCACTGTTCCACTaGAGACCAGGAGCCATCGGC +
Preference number: 4 (lower is better)
Translates to: KPYHHLRMVHYRSQKLTEQPLFH*RPGAIG
Trigger: GCCGATGGCTCCTGGTCTGCAGTGGAACAGTGGCTG...CTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp AGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTTTCACTTTCATCCATTGCTaGCAGCTCTGCAGCATAATG +
Preference number: 4 (lower is better)
Translates to: RIRRGWCGNLPQELQFPFTFIHC*QLCSIM
Trigger: CATTATGCTGCAGAGCTGGCAGCAATGGATGAAAGT...GAAAGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR GCA 90 bp GAACTCACTCATTACTATGGGGATGGCACAAAGTCATACATAAGGGATCCGCCCGATGGTGTGGGAACCTaGCTCAGGAACTACAGTTCC +
Preference number: 4 (lower is better)
Translates to: ELTHYYGDGTKSYIRDPPDGVGT*LRNYSS
Trigger: GGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATC...GGGCGGATCCCTTATGTATGACTTTGTGCCATCCCCATAGTAATGAGTGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp CCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGTACGGTGCTGTATTGCCCTaGCCTCAAAGGGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: PYHHLRMVHYRSQKLTEYGAVLP*PQRAPD
Trigger: ATCAGGCGCCCTTTGAGGCCAGGGCAATACAGCACC...GTACTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp AGAGAGAGCAAGCGAGAGAGGAGGAAGTTCCAGGCTCTTTTAAACAACCAGCTCAAGCTACTTCAGAGATaGTGCTGTATTGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RESKRERRKFQALLNNQLKLLQR*CCIALA
Trigger: GGCCAGGGCAATACAGCACCATCTCTGAAGTAGCTT...GAGCTGGTTGTTTAAAAGAGCCTGGAACTTCCTCCTCTCTCGCTTGCTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp TCTAACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATGCTTCCCATTCCTCTTaGCTTGTAGGTGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: SNNPGPVEWQQQTRTQQYASHSS*LVGGFI
Trigger: GATGAAGCCACCTACAAGCCAAGAGGAATGGGAAGC...ATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp TTGAGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTACAGTCCCAGGAGGCTaGTCCTCTAAGAATCATTTT +
Preference number: 4 (lower is better)
Translates to: LRIRRGWCGNLPQELQFPTVPGG*SSKNHF
Trigger: AAAATGATTCTTAGAGGACCAGCCTCCTGGGACTGT...AGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCCATTTGGAAACCACTTaGTATGTCAAGGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSHLETT*YVKVIS
Trigger: CGAGATGACCTTGACATACCAAGTGGTTTCCAAATG...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp AGCATGGCGCTGGCATCTGCTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGAGTGAGCATTTGATTTaGTCTACCCTACTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: SMALASASGEGLTKLTIMSEHLI*STLLLP
Trigger: AGGCAAGAGTAGGGTAGACCAAATCAAATGCTCACT...CATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCCAGCGCCATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp TCAGAACTTTCTAAGGTAACTAGGCTATTAGGACCTAAGCCAGTGGTCCCTAGAATAAAGAACCAGGGCTaGTCCCAGGTGGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SELSKVTRLLGPKPVVPRIKNQG*SQVGSK
Trigger: CTTGCTGCCCACCTGGGATCAGCCCTGGTTCTTTAT...TCTAGGGACCACTGGCTTAGGTCCTAATAGCCTAGTTACCTTAGAAAGTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp TCTAACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATAGACCTGCTGTTCCATaGGCAAATCGTCTCAACTGT +
Preference number: 4 (lower is better)
Translates to: SNNPGPVEWQQQTRTQQYRPAVP*ANRLNC
Trigger: ACAGTTGAGACGATTTGCTCATGGAACAGCAGGTCT...ATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp AGAGAGAGCAAGCGAGAGAGGAGGAAGTTCCAGGCTCTTTTAAACAACCAGCTCTGTAATGGCAGTGACTaGAGTGATTCCCAGAATCCG +
Preference number: 4 (lower is better)
Translates to: RESKRERRKFQALLNNQLCNGSD*SDSQNP
Trigger: CGGATTCTGGGAATCACTTCAGTCACTGCCATTACA...GAGCTGGTTGTTTAAAAGAGCCTGGAACTTCCTCCTCTCTCGCTTGCTCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp ACTGAAAAACCTGACACAAAGCCTGTTAAGCAGCAAATGGCAGACATTTCTTTCACATCAGCAGCGTGCTaGTGCCCAAGCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: TEKPDTKPVKQQMADISFTSAAC*CPSPPV
Trigger: CACAGGTGGGCTTGGGCATCAGCACGCTGCTGATGT...GAAAGAAATGTCTGCCATTTGCTGCTTAACAGGCTTTGTGTCAGGTTTTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp CTTGCCTTCTACAGAACTAAAACTAACTTCCTGCAACTTTCATCCATTGCTGCCGCCAAAGAGCACCAGTaGGCAAAGCCAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LAFYRTKTNFLQLSSIAAAKEHQ*AKPRSL
Trigger: CAGGCTCCTTGGCTTTGCTCACTGGTGCTCTTTGGC...GGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCACAGTTCCCTTTCTTTaGAGGATTCTATCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSTVPFL*RILSRR
Trigger: TCTTCTGGATAGAATCCTTCAAAGAAAGGGAACTGT...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR GCA 90 bp CCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGTACGATGCAATCACACTGTaGTCTAGGCGCTGCCCTAGG +
Preference number: 4 (lower is better)
Translates to: PYHHLRMVHYRSQKLTEYDAITL*SRRCPR
Trigger: CCTAGGGCAGCGCCTAGAGCACAGTGTGATTGCATC...GTACTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp GAACTCACTCATTACTATGGGGATGGCACAAAGTCATACATAAGGGATCCGCCCCTACTTCAGAGATGGTaGTGTATTGCCCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ELTHYYGDGTKSYIRDPPLLQRW*CIALAS
Trigger: TGAGGCCAGGGCAATACAGCACCATCTCTGAAGTAG...GGGCGGATCCCTTATGTATGACTTTGTGCCATCCCCATAGTAATGAGTGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp AGAGAGAGCAAGCGAGAGAGGAGGAAGTTCCAGGCTCTTTTAAACAACCAGCTCTCCACCAAGAATAACTaGTCCAGCCACTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: RESKRERRKFQALLNNQLSTKNN*SSHCST
Trigger: AGTGGAACAGTGGCTGGAGCAGTTATTCTTGGTGGA...GAGCTGGTTGTTTAAAAGAGCCTGGAACTTCCTCCTCTCTCGCTTGCTCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp CTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCCAGGGGACTGTTTTCAGTTaGCACTGTCATCTATTATAT +
Preference number: 4 (lower is better)
Translates to: LVRASRSLQSWQKVKGSQGTVFS*HCHLLY
Trigger: ATATAATAGATGACAGTGGCAACTGAAAACAGTCCC...CTGGCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp AACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATAGTGCTCATTCCCTCTTCTaGATGAGACGGCTTCAACTT +
Preference number: 4 (lower is better)
Translates to: NNPGPVEWQQQTRTQQYSAHSLF*MRRLQL
Trigger: AAGTTGAAGCCGTCTCATGCAGAAGAGGGAATGAGC...ACTATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp AACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATAGTGCAACTTTCATCCATTaGTGCCAGCTCTGCAGCATA +
Preference number: 4 (lower is better)
Translates to: NNPGPVEWQQQTRTQQYSATFIH*CQLCSI
Trigger: TATGCTGCAGAGCTGGCAGCAATGGATGAAAGTTGC...ACTATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp CTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCCAGTTAGTCGGCTTGCATTaGTATAAGGAAATACTGACA +
Preference number: 4 (lower is better)
Translates to: LVRASRSLQSWQKVKGSQLVGLH*YKEILT
Trigger: TGTCAGTATTTCCTTATAGCAATGCAAGCCGACTAA...CTGGCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCAATTGCTGGTATCTTTaGAATTCTGCTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSNCWYL*NSASHS
Trigger: GGAATGGGAAGCAGAATTCCAAAGATACCAGCAATT...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCCACTTAATGCATTCTTaGTCCAGTGACTATCTCAAA +
Preference number: 4 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSHLMHS*SSDYLK
Trigger: TTTGAGATAGTCACTGGATCAAGAATGCATTAAGTG...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR GCA 90 bp TCTAACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATCAAGGACAGGAATCTTaGTCTCTCTCCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: SNNPGPVEWQQQTRTQQYQGQES*SLSRCS
Trigger: AGAACATCTGGAGAGAGAGCAAGATTCCTGTCCTTG...ATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp AGCATGGCGCTGGCATCTGCTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGAAAAGAGGTTTATTTaGCTCACTGTTCTGCATAGA +
Preference number: 4 (lower is better)
Translates to: SMALASASGEGLTKLTIMEKRFI*LTVLHR
Trigger: TCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTC...CATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCCAGCGCCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp CCATCAATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGGCCTCAAAGGGCGCCTaGTGCAATCACACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PSISCLNLVPRVKCSMLGASKGA*CNHTVL
Trigger: GAGCACAGTGTGATTGCATCAGGCGCCCTTTGAGGC...CCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATATTGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp TCAGAACTTTCTAAGGTAACTAGGCTATTAGGACCTAAGCCAGTGGTCCCTAGAATTCCCAGAATCCGGTaGTCAAACTGCACCATGGTG +
Preference number: 4 (lower is better)
Translates to: SELSKVTRLLGPKPVVPRIPRIR*SNCTMV
Trigger: CACCATGGTGCAGTTTGATCACCGGATTCTGGGAAT...TCTAGGGACCACTGGCTTAGGTCCTAATAGCCTAGTTACCTTAGAAAGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp AAACCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGGGCATGAGAATCGCTTaGACCTGGGAAGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: KPYHHLRMVHYRSQKLTEGMRIA*TWEVEV
Trigger: AACCTCCACTTCCCAGGTTCAAGCGATTCTCATGCC...CTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp AAACCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGAATCATGGCAGAAGGTaGAGGGGAGCCAGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: KPYHHLRMVHYRSQKLTENHGRR*RGASVS
Trigger: TGACACACTGGCTCCCCTTCACCTTCTGCCATGATT...CTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp CTTGCCTTCTACAGAACTAAAACTAACTTCCTGCAACTTTCATCCATTGCTGCCAGGACAACCTGGGTTTaGGGATCAGGAGAGGATGGT +
Preference number: 4 (lower is better)
Translates to: LAFYRTKTNFLQLSSIAARTTWV*GSGEDG
Trigger: ACCATCCTCTCCTGATCCTCAAACCCAGGTTGTCCT...GGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR GCA 90 bp AGAGAGAGCAAGCGAGAGAGGAGGAAGTTCCAGGCTCTTTTAAACAACCAGCTCGTATCTTTGGAATTCTaGTTCCCATTCCTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RESKRERRKFQALLNNQLVSLEF*FPFLLA
Trigger: AGCCAAGAGGAATGGGAAGCAGAATTCCAAAGATAC...GAGCTGGTTGTTTAAAAGAGCCTGGAACTTCCTCCTCTCTCGCTTGCTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp AAACCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGAGCCAGCAGAGTCACTaGTGCCATCTTGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KPYHHLRMVHYRSQKLTESQQSH*CHLGPS
Trigger: AGAAGGACCAAGATGGCAGCAGTGACTCTGCTGGCT...CTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCAAGCTTGTCAAAATCTaGAATTTCCCCATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSKLVKI*NFPISE
Trigger: TTCAGAAATGGGGAAATTGCAGATTTTGACAAGCTT...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp TCAGAACTTTCTAAGGTAACTAGGCTATTAGGACCTAAGCCAGTGGTCCCTAGAGTGAGGTCCACAAGCTaGCACAATAAAGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: SELSKVTRLLGPKPVVPRVRSTS*HNKEPG
Trigger: CCCTGGTTCTTTATTGTGCCAGCTTGTGGACCTCAC...TCTAGGGACCACTGGCTTAGGTCCTAATAGCCTAGTTACCTTAGAAAGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp AGCATGGCGCTGGCATCTGCTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGAGGATTCTCCCATTTTaGGAAAGGAGTTATAAACAA +
Preference number: 4 (lower is better)
Translates to: SMALASASGEGLTKLTIMRILPF*ERSYKQ
Trigger: TTGTTTATAACTCCTTTCCCAAAATGGGAGAATCCT...CATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCCAGCGCCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp AACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATAGTCAAACTGCACCATGGTaGGATTCTCAAAAACATTCC +
Preference number: 4 (lower is better)
Translates to: NNPGPVEWQQQTRTQQYSQTAPW*DSQKHS
Trigger: GGAATGTTTTTGAGAATCCCACCATGGTGCAGTTTG...ACTATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp AAGAAAAGAGGTTTATTTGGCTCACTGTTCTGCATAGAACTGTATAGGAAGCATAGCCTGACTGGTGAGTaGCGGCCAGAGGAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: KKRGLFGSLFCIELYRKHSLTGE*RPEELG
Trigger: TCCCAACTCCTCTGGCCGCCACTCACCAGTCAGGCT...ATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp AGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTTTCGAAAAGAGGTTTATTTaGCTCACTGTTCTGCATAGA +
Preference number: 4 (lower is better)
Translates to: RIRRGWCGNLPQELQFPFEKRFI*LTVLHR
Trigger: TCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTC...GAAAGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp CCATCCTCAAATCAGATGTTTCTGATGCCTTCATCCAAATCACTGATTTTAAAAGCAGCAAGGCGGTACTaGCTGACCCGAGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: PSSNQMFLMPSSKSLILKAARRY*LTRGMS
Trigger: TGACATCCCTCGGGTCAGTCAGTACCGCCTTGCTGC...TTTTAAAATCAGTGATTTGGATGAAGGCATCAGAAACATCTGATTTGAGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp CTTGCCTTCTACAGAACTAAAACTAACTTCCTGCAACTTTCATCCATTGCTGCCATTCCCAGAATCCGGTaGTCAAACTGCACCATGGTG +
Preference number: 4 (lower is better)
Translates to: LAFYRTKTNFLQLSSIAAIPRIR*SNCTMV
Trigger: CACCATGGTGCAGTTTGATCACCGGATTCTGGGAAT...GGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp ATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGGTATTTCAGCCACTGTTCCACTaGAGACCAGGAGCCATCGGC +
Preference number: 4 (lower is better)
Translates to: ISCLNLVPRVKCSMLGVFQPLFH*RPGAIG
Trigger: GCCGATGGCTCCTGGTCTGCAGTGGAACAGTGGCTG...AAATACCCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp CCATCCTCAAATCAGATGTTTCTGATGCCTTCATCCAAATCACTGATTTTAAAACCGAGCTGGGGCACCTaGTCGCCAGTGTTACTGTCT +
Preference number: 4 (lower is better)
Translates to: PSSNQMFLMPSSKSLILKPSWGT*SPVLLS
Trigger: AGACAGTAACACTGGCGAGCAGGTGCCCCAGCTCGG...TTTTAAAATCAGTGATTTGGATGAAGGCATCAGAAACATCTGATTTGAGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp AAGAAAAGAGGTTTATTTGGCTCACTGTTCTGCATAGAACTGTATAGGAAGCATATAAAGAACCAGGGCTaGTCCCAGGTGGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: KKRGLFGSLFCIELYRKHIKNQG*SQVGSK
Trigger: CTTGCTGCCCACCTGGGATCAGCCCTGGTTCTTTAT...ATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp AAACCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGACCCCAGTGAGCATTTaGTTTGGTCTACCCTACTCT +
Preference number: 4 (lower is better)
Translates to: KPYHHLRMVHYRSQKLTETPVSI*FGLPYS
Trigger: AGAGTAGGGTAGACCAAATCAAATGCTCACTGGGGT...CTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp CTTGCCTTCTACAGAACTAAAACTAACTTCCTGCAACTTTCATCCATTGCTGCCACCCCAGTGAGCATTTaGTTTGGTCTACCCTACTCT +
Preference number: 4 (lower is better)
Translates to: LAFYRTKTNFLQLSSIAATPVSI*FGLPYS
Trigger: AGAGTAGGGTAGACCAAATCAAATGCTCACTGGGGT...GGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp CCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGTACGTACCCCTTCCAGATTaGAAAGCTACTTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: PYHHLRMVHYRSQKLTEYVPLPD*KATSEM
Trigger: CATCTCTGAAGTAGCTTTGCAATCTGGAAGGGGTAC...GTACTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp AACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATAGTTGGCCATCAATATCTTaGTTAAATTTGGTACCCAGA +
Preference number: 4 (lower is better)
Translates to: NNPGPVEWQQQTRTQQYSWPSIS*LNLVPR
Trigger: TCTGGGTACCAAATTTAAGCAAGATATTGATGGCCA...ACTATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp CCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGTACCAAGGACAGGAATCTTaGTCTCTCTCCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: PYHHLRMVHYRSQKLTEYQGQES*SLSRCS
Trigger: AGAACATCTGGAGAGAGAGCAAGATTCCTGTCCTTG...GTACTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp CTTGCCTTCTACAGAACTAAAACTAACTTCCTGCAACTTTCATCCATTGCTGCCGCTCATTCCCTCTTCTaGATGAGACGGCTTCAACTT +
Preference number: 4 (lower is better)
Translates to: LAFYRTKTNFLQLSSIAAAHSLF*MRRLQL
Trigger: AAGTTGAAGCCGTCTCATGCAGAAGAGGGAATGAGC...GGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp CCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGTACACTTTCATCCATTGCTaGCAGCTCTGCAGCATAATG +
Preference number: 4 (lower is better)
Translates to: PYHHLRMVHYRSQKLTEYTFIHC*QLCSIM
Trigger: CATTATGCTGCAGAGCTGGCAGCAATGGATGAAAGT...GTACTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp AGAGAGAGCAAGCGAGAGAGGAGGAAGTTCCAGGCTCTTTTAAACAACCAGCTCGGAACTTTAAAAATATaGCTTTTACTTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RESKRERRKFQALLNNQLGTLKI*LLLPPG
Trigger: CCCTGGAGGAAGTAAAAGGCATATTTTTAAAGTTCC...GAGCTGGTTGTTTAAAAGAGCCTGGAACTTCCTCCTCTCTCGCTTGCTCTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR GCA 90 bp ACTGAAAAACCTGACACAAAGCCTGTTAAGCAGCAAATGGCAGACATTTCTTTCTGGGTTGGGTCATACTaGCCTCTGCTGACTCAGTTA +
Preference number: 4 (lower is better)
Translates to: TEKPDTKPVKQQMADISFWVGSY*PLLTQL
Trigger: TAACTGAGTCAGCAGAGGGCAGTATGACCCAACCCA...GAAAGAAATGTCTGCCATTTGCTGCTTAACAGGCTTTGTGTCAGGTTTTTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp GAACTCACTCATTACTATGGGGATGGCACAAAGTCATACATAAGGGATCCGCCCAATTGCTGGTATCTTTaGAATTCTGCTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: ELTHYYGDGTKSYIRDPPNCWYL*NSASHS
Trigger: GGAATGGGAAGCAGAATTCCAAAGATACCAGCAATT...GGGCGGATCCCTTATGTATGACTTTGTGCCATCCCCATAGTAATGAGTGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp AAACCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGCTCAACTGTAGGAGTTaGTGGGTTTCAGGCAACTTG +
Preference number: 4 (lower is better)
Translates to: KPYHHLRMVHYRSQKLTELNCRS*WVSGNL
Trigger: CAAGTTGCCTGAAACCCACCAACTCCTACAGTTGAG...CTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp CTTGCCTTCTACAGAACTAAAACTAACTTCCTGCAACTTTCATCCATTGCTGCCCTCAACTGTAGGAGTTaGTGGGTTTCAGGCAACTTG +
Preference number: 4 (lower is better)
Translates to: LAFYRTKTNFLQLSSIAALNCRS*WVSGNL
Trigger: CAAGTTGCCTGAAACCCACCAACTCCTACAGTTGAG...GGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp TCTAACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATAGTAAGTTGACCATTTaGAAACCACTTGGTATGTCA +
Preference number: 4 (lower is better)
Translates to: SNNPGPVEWQQQTRTQQYSKLTI*KPLGMS
Trigger: TGACATACCAAGTGGTTTCCAAATGGTCAACTTACT...ATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp AAACCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGTCGATGGGGTCATTCTaGGACTGTTTTCAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: KPYHHLRMVHYRSQKLTESMGSF*DCFQLP
Trigger: TGGCAACTGAAAACAGTCCCAGAATGACCCCATCGA...CTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp GAACTCACTCATTACTATGGGGATGGCACAAAGTCATACATAAGGGATCCGCCCTTAATTTCATCTCGATaGGGTCATTCTGGGACTGTT +
Preference number: 4 (lower is better)
Translates to: ELTHYYGDGTKSYIRDPPLISSR*GHSGTV
Trigger: AACAGTCCCAGAATGACCCCATCGAGATGAAATTAA...GGGCGGATCCCTTATGTATGACTTTGTGCCATCCCCATAGTAATGAGTGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp TCTAACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATTCATTACTATGGGGATaGCACAAAGTCATACATAAG +
Preference number: 4 (lower is better)
Translates to: SNNPGPVEWQQQTRTQQYSLLWG*HKVIHK
Trigger: CTTATGTATGACTTTGTGCCATCCCCATAGTAATGA...ATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR CAA 72 bp TTGGAGGCAACTGTAGAAGCATTAATATATGGTTCTTaGGGTTGGGTCATACTGCCCTCTGCTGACTCAGTT +
Preference number: 4 (lower is better)
Translates to: LEATVEALIYGS*GWVILPSADSV
Trigger: AACTGAGTCAGCAGAGGGCAGTATGACCCAACCCAAAGAACCATATATTAATGCTTCTACAGTTGCCTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR TCA 90 bp ATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGGTATTTCTTTCATGCCACGGCTaGGCCAGCCCTTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: ISCLNLVPRVKCSMLGVFLSCHG*ASPFSK
Trigger: TTTGGAGAAAGGGCTGGCTCAGCCGTGGCATGAAAG...AAATACCCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp AAGAAAAGAGGTTTATTTGGCTCACTGTTCTGCATAGAACTGTATAGGAAGCATGCCCGGCCAATGTGGTaGAACCCCTTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: KKRGLFGSLFCIELYRKHARPMW*NPFSTK
Trigger: TTTAGTAGAGAAGGGGTTTCACCACATTGGCCGGGC...ATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR GCA 90 bp GAACTCACTCATTACTATGGGGATGGCACAAAGTCATACATAAGGGATCCGCCCATCTCCTTTATTAAATaGCAATCTACCATCGAGAGG +
Preference number: 4 (lower is better)
Translates to: ELTHYYGDGTKSYIRDPPISFIK*QSTIER
Trigger: CCTCTCGATGGTAGATTGGCATTTAATAAAGGAGAT...GGGCGGATCCCTTATGTATGACTTTGTGCCATCCCCATAGTAATGAGTGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp AAGAAAAGAGGTTTATTTGGCTCACTGTTCTGCATAGAACTGTATAGGAAGCATGTTTCAGGCAACTTGTaGGGAGGGAGTAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: KKRGLFGSLFCIELYRKHVSGNL*GGSSSD
Trigger: GTCACTGCTACTCCCTCCGCACAAGTTGCCTGAAAC...ATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp GAACTCACTCATTACTATGGGGATGGCACAAAGTCATACATAAGGGATCCGCCCTGGCCATCAATATCTTaGTTAAATTTGGTACCCAGA +
Preference number: 4 (lower is better)
Translates to: ELTHYYGDGTKSYIRDPPWPSIS*LNLVPR
Trigger: TCTGGGTACCAAATTTAAGCAAGATATTGATGGCCA...GGGCGGATCCCTTATGTATGACTTTGTGCCATCCCCATAGTAATGAGTGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp CCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGTACCAAACTGCACCATGGTaGGATTCTCAAAAACATTCC +
Preference number: 4 (lower is better)
Translates to: PYHHLRMVHYRSQKLTEYQTAPW*DSQKHS
Trigger: GGAATGTTTTTGAGAATCCCACCATGGTGCAGTTTG...GTACTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp ATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGGTATTTAAAAGAGGAACTAGCTaGGCGTGGTGGCCCATGCCT +
Preference number: 4 (lower is better)
Translates to: ISCLNLVPRVKCSMLGVFKRGTS*AWWPMP
Trigger: AGGCATGGGCCACCACGCCCAGCTAGTTCCTCTTTT...AAATACCCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp AAGAAAAGAGGTTTATTTGGCTCACTGTTCTGCATAGAACTGTATAGGAAGCATCCTGGACCTGTAGAGTaGCAGCAACAGACCAGAACT +
Preference number: 4 (lower is better)
Translates to: KKRGLFGSLFCIELYRKHPGPVE*QQQTRT
Trigger: AGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGG...ATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR CAA 72 bp ACAGAACTAAAACTAACTTCCTGCAACTTTCATCCATaGCTGCCAGCTCTGCAGCATAATGGAAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: TELKLTSCNFHP*LPALQHNGSSF
Trigger: GAATGAGCTTCCATTATGCTGCAGAGCTGGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp CCATCAATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGGCAACTTTCATCCATTaGTGCCAGCTCTGCAGCATA +
Preference number: 4 (lower is better)
Translates to: PSISCLNLVPRVKCSMLGATFIH*CQLCSI
Trigger: TATGCTGCAGAGCTGGCAGCAATGGATGAAAGTTGC...CCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATATTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp ATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGGTATTTACCCCACATTCGGTGTaGGTACTCCATGTACCAGAT +
Preference number: 4 (lower is better)
Translates to: ISCLNLVPRVKCSMLGVFTPHSV*VLHVPD
Trigger: ATCTGGTACATGGAGTACTCACACCGAATGTGGGGT...AAATACCCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp AAGAAAAGAGGTTTATTTGGCTCACTGTTCTGCATAGAACTGTATAGGAAGCATAGACCTGCTGTTCCATaGGCAAATCGTCTCAACTGT +
Preference number: 4 (lower is better)
Translates to: KKRGLFGSLFCIELYRKHRPAVP*ANRLNC
Trigger: ACAGTTGAGACGATTTGCTCATGGAACAGCAGGTCT...ATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp AAACCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGCAAATCAGATGTTTCTaGTGCCTTCATCCAAATCAC +
Preference number: 4 (lower is better)
Translates to: KPYHHLRMVHYRSQKLTEQIRCF*CLHPNH
Trigger: GTGATTTGGATGAAGGCATCAGAAACATCTGATTTG...CTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp CTTGCCTTCTACAGAACTAAAACTAACTTCCTGCAACTTTCATCCATTGCTGCCCAAATCAGATGTTTCTaGTGCCTTCATCCAAATCAC +
Preference number: 4 (lower is better)
Translates to: LAFYRTKTNFLQLSSIAAQIRCF*CLHPNH
Trigger: GTGATTTGGATGAAGGCATCAGAAACATCTGATTTG...GGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp ATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGGTATTTCTACTTCAGAGATGGTaGTGTATTGCCCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ISCLNLVPRVKCSMLGVFLLQRW*CIALAS
Trigger: TGAGGCCAGGGCAATACAGCACCATCTCTGAAGTAG...AAATACCCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp TCAGAACTTTCTAAGGTAACTAGGCTATTAGGACCTAAGCCAGTGGTCCCTAGAATCTCCTTTATTAAATaGCAATCTACCATCGAGAGG +
Preference number: 4 (lower is better)
Translates to: SELSKVTRLLGPKPVVPRISFIK*QSTIER
Trigger: CCTCTCGATGGTAGATTGGCATTTAATAAAGGAGAT...TCTAGGGACCACTGGCTTAGGTCCTAATAGCCTAGTTACCTTAGAAAGTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp ATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGGTATTTGCTTCCCATTCCTCTTaGCTTGTAGGTGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: ISCLNLVPRVKCSMLGVFASHSS*LVGGFI
Trigger: GATGAAGCCACCTACAAGCCAAGAGGAATGGGAAGC...AAATACCCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp ACTGAAAAACCTGACACAAAGCCTGTTAAGCAGCAAATGGCAGACATTTCTTTCACGTTAGGTCATTTATaGCTCTCAGACACGTTAAGC +
Preference number: 4 (lower is better)
Translates to: TEKPDTKPVKQQMADISFTLGHL*LSDTLS
Trigger: GCTTAACGTGTCTGAGAGCCATAAATGACCTAACGT...GAAAGAAATGTCTGCCATTTGCTGCTTAACAGGCTTTGTGTCAGGTTTTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp CCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGTACTTTGAACATGAGATTTaGAGGGGACAAAACATCCAA +
Preference number: 4 (lower is better)
Translates to: PYHHLRMVHYRSQKLTEYFEHEI*RGQNIQ
Trigger: TTGGATGTTTTGTCCCCTCCAAATCTCATGTTCAAA...GTACTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp ATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGGTATTTTGTAATGGCAGTGACTaGAGTGATTCCCAGAATCCG +
Preference number: 4 (lower is better)
Translates to: ISCLNLVPRVKCSMLGVFCNGSD*SDSQNP
Trigger: CGGATTCTGGGAATCACTTCAGTCACTGCCATTACA...AAATACCCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp CCATCAATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGCTGGACTCATCATTCTaGTCTCTTCTTCTGGATACA +
Preference number: 4 (lower is better)
Translates to: PSISCLNLVPRVKCSMLGLDSSF*SLLLDT
Trigger: TGTATCCAGAAGAAGAGATCAGAATGATGAGTCCAG...CCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATATTGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp AAGAAAAGAGGTTTATTTGGCTCACTGTTCTGCATAGAACTGTATAGGAAGCATACAGAGTACTGGAGTTaGAAGAGAACTGAGATCACC +
Preference number: 4 (lower is better)
Translates to: KKRGLFGSLFCIELYRKHTEYWS*KRTEIT
Trigger: GGTGATCTCAGTTCTCTTTCAACTCCAGTACTCTGT...ATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp AAGAAAAGAGGTTTATTTGGCTCACTGTTCTGCATAGAACTGTATAGGAAGCATAACCATATCACCACCTaGGAATGGTACACTACAGGT +
Preference number: 4 (lower is better)
Translates to: KKRGLFGSLFCIELYRKHNHITT*EWYTTG
Trigger: ACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTT...ATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp CCATCCTCAAATCAGATGTTTCTGATGCCTTCATCCAAATCACTGATTTTAAAAGGAAAGAGCAATCGCTaGATACTGATGACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: PSSNQMFLMPSSKSLILKGKSNR*ILMTGN
Trigger: GTTCCCTGTCATCAGTATGCAGCGATTGCTCTTTCC...TTTTAAAATCAGTGATTTGGATGAAGGCATCAGAAACATCTGATTTGAGGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR GCA 90 bp ATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGGTATTTGGAAAGAGCAATCGCTaGATACTGATGACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: ISCLNLVPRVKCSMLGVFGKSNR*ILMTGN
Trigger: GTTCCCTGTCATCAGTATGCAGCGATTGCTCTTTCC...AAATACCCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp AAACCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGGGGACTGTTTTCAGTTaGCACTGTCATCTATTATAT +
Preference number: 4 (lower is better)
Translates to: KPYHHLRMVHYRSQKLTEGTVFS*HCHLLY
Trigger: ATATAATAGATGACAGTGGCAACTGAAAACAGTCCC...CTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp CTTGCCTTCTACAGAACTAAAACTAACTTCCTGCAACTTTCATCCATTGCTGCCTTTGAACATGAGATTTaGAGGGGACAAAACATCCAA +
Preference number: 4 (lower is better)
Translates to: LAFYRTKTNFLQLSSIAAFEHEI*RGQNIQ
Trigger: TTGGATGTTTTGTCCCCTCCAAATCTCATGTTCAAA...GGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp CTTGCCTTCTACAGAACTAAAACTAACTTCCTGCAACTTTCATCCATTGCTGCCATGAGGCTTGGGCTTTaGGATTTTTCTAAGATTCAA +
Preference number: 4 (lower is better)
Translates to: LAFYRTKTNFLQLSSIAAMRLGL*DFSKIQ
Trigger: TTGAATCTTAGAAAAATCCCAAAGCCCAAGCCTCAT...GGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp AAGAAAAGAGGTTTATTTGGCTCACTGTTCTGCATAGAACTGTATAGGAAGCATGACTTGTCTGCACATTaGAATCACCTGGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: KKRGLFGSLFCIELYRKHDLSAH*NHLGNF
Trigger: AAAGTTCCCCAGGTGATTCCAATGTGCAGACAAGTC...ATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR CAA 72 bp TTCATCTCGATGGGGTCATTCTGGGACTGTTTTCAGTaGCCACTGTCATCTATTATATTAGCAATATTGGGT +
Preference number: 4 (lower is better)
Translates to: FISMGSFWDCFQ*PLSSIILAILG
Trigger: ACCCAATATTGCTAATATAATAGATGACAGTGGCAACTGAAAACAGTCCCAGAATGACCCCATCGAGATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp AAGAAAAGAGGTTTATTTGGCTCACTGTTCTGCATAGAACTGTATAGGAAGCATGTATCTTTGGAATTCTaGTTCCCATTCCTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KKRGLFGSLFCIELYRKHVSLEF*FPFLLA
Trigger: AGCCAAGAGGAATGGGAAGCAGAATTCCAAAGATAC...ATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp AAACCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGAGGATTCTCCCATTTTaGGAAAGGAGTTATAAACAA +
Preference number: 4 (lower is better)
Translates to: KPYHHLRMVHYRSQKLTERILPF*ERSYKQ
Trigger: TTGTTTATAACTCCTTTCCCAAAATGGGAGAATCCT...CTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
3UTR CAA 72 bp CTTCTTCTGGATACACACTTAGTGGCCATCAATATCTaGCTTAAATTTGGTACCCAGAGTGAAATGCAGTAT +
Preference number: 4 (lower is better)
Translates to: LLLDTHLVAINI*LKFGTQSEMQY
Trigger: ATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATATTGATGGCCACTAAGTGTGTATCCAGAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR TCA 90 bp CCATCAATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGCATAAACAACCAGAGTaGGAACTCACTCATTACTAT +
Preference number: 4 (lower is better)
Translates to: PSISCLNLVPRVKCSMLGHKQPE*ELTHYY
Trigger: ATAGTAATGAGTGAGTTCTCACTCTGGTTGTTTATG...CCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATATTGATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp ATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGGTATTTAACTTACTCATGAGTTaGTACTTCCTTGGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: ISCLNLVPRVKCSMLGVFNLLMS*YFLGGN
Trigger: GTTGCCTCCAAGGAAGTAGCAACTCATGAGTAAGTT...AAATACCCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CCA 90 bp AAGAAAAGAGGTTTATTTGGCTCACTGTTCTGCATAGAACTGTATAGGAAGCATTTAATTTCATCTCGATaGGGTCATTCTGGGACTGTT +
Preference number: 4 (lower is better)
Translates to: KKRGLFGSLFCIELYRKHLISSR*GHSGTV
Trigger: AACAGTCCCAGAATGACCCCATCGAGATGAAATTAA...ATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CCA 90 bp CCATCAATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGTCATTACTATGGGGATaGCACAAAGTCATACATAAG +
Preference number: 4 (lower is better)
Translates to: PSISCLNLVPRVKCSMLGSLLWG*HKVIHK
Trigger: CTTATGTATGACTTTGTGCCATCCCCATAGTAATGA...CCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATATTGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR GCA 90 bp CCATCCTCAAATCAGATGTTTCTGATGCCTTCATCCAAATCACTGATTTTAAAACTAAAACTAACTTCCTaGAACTTTCATCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: PSSNQMFLMPSSKSLILKLKLTS*NFHPLL
Trigger: CAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAG...TTTTAAAATCAGTGATTTGGATGAAGGCATCAGAAACATCTGATTTGAGGATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000016171.6
3UTR CAA 72 bp TTTCAGTTGCCACTGTCATCTATTATATTAGCAATATaGGGTTGCTCCATCCTCAAATCAGATGTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: FQLPLSSIILAI*GCSILKSDVSD
Trigger: ATCAGAAACATCTGATTTGAGGATGGAGCAACCCAATATTGCTAATATAATAGATGACAGTGGCAACTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS GCA 90 bp CACTGTGCTCTAGGCGCTGCCCTAGGAGCCAGGAGCGGCAGATACTaGCTCCCCTTCAAGGCCCTCAACGGCGGAAAGAGCAATCGCTGC +
Preference number: 5 (lower is better)
Translates to: HCALGAALGARSGRY*LPFKALNGGKSNRC
Trigger: GCAGCGATTGCTCTTTCCGCCGTTGAGGGCCTTGAAGGGGAGGCAGTATCTGCCGCTCCTGGCTCCTAGGGCAGCGCCTAGAGCACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS TCA 90 bp ACTGCAGACCAGGAGCCATCGGCCCACCACCCGCTCAGCAGCCTTTaGGGGAAGGGACACTGTACCCCTTCCAGATTGCAAAGCTACTTC +
Preference number: 5 (lower is better)
Translates to: TADQEPSAHHPLSSL*GKGHCTPSRLQSYF
Trigger: GAAGTAGCTTTGCAATCTGGAAGGGGTACAGTGTCCCTTCCCTCAAAGGCTGCTGAGCGGGTGGTGGGCCGATGGCTCCTGGTCTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS GCA 90 bp TACTGCCTCCCCTTCAAGGCCCTCAACGGCGGAAAGAGCAATCGCTaGATACTGATGACAGGGAACAGCCACCTCTTCCACAACCCAGGG +
Preference number: 5 (lower is better)
Translates to: YCLPFKALNGGKSNR*ILMTGNSHLFHNPG
Trigger: CCCTGGGTTGTGGAAGAGGTGGCTGTTCCCTGTCATCAGTATGCAGCGATTGCTCTTTCCGCCGTTGAGGGCCTTGAAGGGGAGGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS CCA 90 bp GCAACTTGTGCGGAGGGAGTAGCAGTGACAGTGAGGTCCACAAGCTaGCACAATAAAGAACCAGGGCTGATCCCAGGTGGGCAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: ATCAEGVAVTVRSTS*HNKEPGLIPGGQQG
Trigger: GCCTTGCTGCCCACCTGGGATCAGCCCTGGTTCTTTATTGTGCCAGCTTGTGGACCTCACTGTCACTGCTACTCCCTCCGCACAAGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCCCCGCTCAGCAGCCTTaGAGGGAAGGGACACTGTAC +
Preference number: 5 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSPAQQP*REGTLY
Trigger: GTACAGTGTCCCTTCCCTCAAAGGCTGCTGAGCGGG...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp TCCGAGCTGGGGCACCTGCTCGCCAGTGTTACTGTCTCCATCAGCCTGACCCCAGACCCCAGTGAGCATTaGATTTGGTCTACCCTACTC +
Preference number: 5 (lower is better)
Translates to: SELGHLLASVTVSISLTPDPSEH*IWSTLL
Trigger: GAGTAGGGTAGACCAAATCAAATGCTCACTGGGGTC...TGGGGTCAGGCTGATGGAGACAGTAACACTGGCGAGCAGGTGCCCCAGCTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS TCA 90 bp AGACGAGGCCACAGAGGGCAAGAACACGTCCTTTCATGCCACGGCTaGGCCAGCCCTTTCTCCAAAAGTAGGCAGCAGGCAGGATGTACA +
Preference number: 5 (lower is better)
Translates to: RRGHRGQEHVLSCHG*ASPFSKSRQQAGCT
Trigger: TGTACATCCTGCCTGCTGCCTACTTTTGGAGAAAGGGCTGGCTCAGCCGTGGCATGAAAGGACGTGTTCTTGCCCTCTGTGGCCTCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS GCA 90 bp GCCCAAGCCCACCTGTGTATACGCCAAAGCCAGCAGAGTCACTGCTaGCATCTTGGTCCTTCTAGGAAGGGGAATTCTCCGAGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: AQAHLCIRQSQQSHC*HLGPSRKGNSPREE
Trigger: TTCCTCTCTCGGAGAATTCCCCTTCCTAGAAGGACCAAGATGGCAGCAGTGACTCTGCTGGCTTTGGCGTATACACAGGTGGGCTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000497381.1
CDS GCA 90 bp GATGCCCAAGCCCACCTGTGTATACGCCAAAGCCAGCAGAGTCACTaGTGCCATCTTGGTCCTTCTAGGAAGGGGAATTCTCCGAGAGAG +
Preference number: 5 (lower is better)
Translates to: DAQAHLCIRQSQQSH*CHLGPSRKGNSPRE
Trigger: CTCTCTCGGAGAATTCCCCTTCCTAGAAGGACCAAGATGGCAGCAGTGACTCTGCTGGCTTTGGCGTATACACAGGTGGGCTTGGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000497381.1
CDS-3UTR CAA 90 bp AGCATGGCGCTGGCATCTGCTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGTGGGTTTCAGGCAACTaGTGCGGAGGGAGTAGCAGT +
Preference number: 5 (lower is better)
Translates to: SMALASASGEGLTKLTIMWVSGN*CGGSSS
Trigger: ACTGCTACTCCCTCCGCACAAGTTGCCTGAAACCCA...CATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCCAGCGCCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp TCCGAGCTGGGGCACCTGCTCGCCAGTGTTACTGTCTCCATCAGCCTGACCCCACCATTTGGAAACCACTaGGTATGTCAAGGTCATCTC +
Preference number: 5 (lower is better)
Translates to: SELGHLLASVTVSISLTPPFGNH*VCQGHL
Trigger: GAGATGACCTTGACATACCAAGTGGTTTCCAAATGG...TGGGGTCAGGCTGATGGAGACAGTAACACTGGCGAGCAGGTGCCCCAGCTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS TCA 90 bp AAAGAACCAGGGCTGATCCCAGGTGGGCAGCAAGGCGGTACTGACTaGCCCGAGGGATGTCATGGGAGTCTGATTTTTCTTCTAGTCCAC +
Preference number: 5 (lower is better)
Translates to: KEPGLIPGGQQGGTD*PEGCHGSLIFLLVH
Trigger: GTGGACTAGAAGAAAAATCAGACTCCCATGACATCCCTCGGGTCAGTCAGTACCGCCTTGCTGCCCACCTGGGATCAGCCCTGGTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS GCA 90 bp AGCAACCATGAAGTACTTTCCTGTACCAGTCACAGAGAACCTCCCTaGAGTCCCAGCCTGATCACTCCTCCACAGGCTGTCTCTTCCACC +
Preference number: 5 (lower is better)
Translates to: SNHEVLSCTSHREPP*SPSLITPPQAVSST
Trigger: GGTGGAAGAGACAGCCTGTGGAGGAGTGATCAGGCTGGGACTGCAGGGAGGTTCTCTGTGACTGGTACAGGAAAGTACTTCATGGTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497381.1
CDS-3UTR CAA 90 bp TTGAGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTTGGGTTTCAGGCAACTaGTGCGGAGGGAGTAGCAGT +
Preference number: 5 (lower is better)
Translates to: LRIRRGWCGNLPQELQFPWVSGN*CGGSSS
Trigger: ACTGCTACTCCCTCCGCACAAGTTGCCTGAAACCCA...AGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS TCA 90 bp AAAGCCCCTGAGAGGGCCGTAAGGAACACCAGACCTGCTGTTCCATaGGCAAATCGTCTCAACTGTAGGAGTTGGTGGGTTTCAGGCAAC +
Preference number: 5 (lower is better)
Translates to: KAPERAVRNTRPAVP*ANRLNCRSWWVSGN
Trigger: GTTGCCTGAAACCCACCAACTCCTACAGTTGAGACGATTTGCTCATGGAACAGCAGGTCTGGTGTTCCTTACGGCCCTCTCAGGGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS GCA 90 bp CGCTCAGCAGCCTTTGAGGGAAGGGACACTGTACCCCTTCCAGATTaGAAAGCTACTTCAGAGATGGTGCTGTATTGCCCTGGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: RSAAFEGRDTVPLPD*KATSEMVLYCPGLK
Trigger: TTTGAGGCCAGGGCAATACAGCACCATCTCTGAAGTAGCTTTGCAATCTGGAAGGGGTACAGTGTCCCTTCCCTCAAAGGCTGCTGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp AGCATGGCGCTGGCATCTGCTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGTGCTTCCCATTCCTCTaGGCTTGTAGGTGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: SMALASASGEGLTKLTIMCFPFL*ACRWLH
Trigger: ATGAAGCCACCTACAAGCCAAGAGGAATGGGAAGCA...CATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCCAGCGCCATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp AACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATAGTGCTGAGATCACGCCATaGTACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: NNPGPVEWQQQTRTQQYSAEITP*YSSLGN
Trigger: GTTGCCCAGGCTGGAGTACAATGGCGTGATCTCAGC...ACTATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CAA 90 bp CTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCCAGTCAAGGACAGGAATCTaGCTCTCTCTCCAGATGTTC +
Preference number: 5 (lower is better)
Translates to: LVRASRSLQSWQKVKGSQSRTGI*LSLQMF
Trigger: GAACATCTGGAGAGAGAGCAAGATTCCTGTCCTTGA...CTGGCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp CTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGGCAGAAGGTGAAGGGGAGCATATGGTTCTTTGGGTaGGGTCATACTGCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: LLVRASRSLQSWQKVKGSIWFFG*GHTALC
Trigger: GCAGAGGGCAGTATGACCCAACCCAAAGAACCATAT...GCTCCCCTTCACCTTCTGCCATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CAA 90 bp AGGATCAGGAGAGGATGGTGTGGGAACCTGCCTCAGGAACTACAGTTCCCTTTCTGCTTCCCATTCCTCTaGGCTTGTAGGTGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: RIRRGWCGNLPQELQFPFCFPFL*ACRWLH
Trigger: ATGAAGCCACCTACAAGCCAAGAGGAATGGGAAGCA...GAAAGGGAACTGTAGTTCCTGAGGCAGGTTCCCACACCATCCTCTCCTGATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CAA 90 bp TCTAACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATCCTGGGAAGTGGAGGTaGCAGAGTGAGCTGAGATCA +
Preference number: 5 (lower is better)
Translates to: SNNPGPVEWQQQTRTQQYPGKWR*QSELRS
Trigger: TGATCTCAGCTCACTCTGCAACCTCCACTTCCCAGG...ATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CAA 90 bp AGCATGGCGCTGGCATCTGCTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGTGTACCCCTTCCAGATaGCAAAGCTACTTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: SMALASASGEGLTKLTIMCTPSR*QSYFRD
Trigger: ATCTCTGAAGTAGCTTTGCAATCTGGAAGGGGTACA...CATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCCAGCGCCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp CCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGTACTGGCGGCCAGAGGAGTaGGGACATACATCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: PYHHLRMVHYRSQKLTEYWRPEE*GHTSAA
Trigger: CGCTGCTGATGTATGTCCCAACTCCTCTGGCCGCCA...GTACTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CAA 90 bp AGAGAGAGCAAGCGAGAGAGGAGGAAGTTCCAGGCTCTTTTAAACAACCAGCTCGACCCCAGTGAGCATTaGATTTGGTCTACCCTACTC +
Preference number: 5 (lower is better)
Translates to: RESKRERRKFQALLNNQLDPSEH*IWSTLL
Trigger: GAGTAGGGTAGACCAAATCAAATGCTCACTGGGGTC...GAGCTGGTTGTTTAAAAGAGCCTGGAACTTCCTCCTCTCTCGCTTGCTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS TCA 90 bp AGGCAGGATGTACACAAGGCCTACAAGGCGACCCCACATTCGGTGTaGGTACTCCATGTACCAGATGAACTTGAATTCTGTCAGTGTCAT +
Preference number: 5 (lower is better)
Translates to: RQDVHKAYKATPHSV*VLHVPDELEFCQCH
Trigger: ATGACACTGACAGAATTCAAGTTCATCTGGTACATGGAGTACTCACACCGAATGTGGGGTCGCCTTGTAGGCCTTGTGTACATCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp TCTAACAACCCTGGACCTGTAGAGTGGCAGCAACAGACCAGAACTCAGCAGTATTGTACCCCTTCCAGATaGCAAAGCTACTTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: SNNPGPVEWQQQTRTQQYCTPSR*QSYFRD
Trigger: ATCTCTGAAGTAGCTTTGCAATCTGGAAGGGGTACA...ATACTGCTGAGTTCTGGTCTGTTGCTGCCACTCTACAGGTCCAGGGTTGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp AAACCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGGTCACTGCTGCCATCTaGGTCCTTCTAGGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: KPYHHLRMVHYRSQKLTEVTAAI*VLLGRG
Trigger: TCCCCTTCCTAGAAGGACCAAGATGGCAGCAGTGAC...CTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp AGCATGGCGCTGGCATCTGCTTCTGGTGAGGGCCTCACGAAGCTTACAATCATGAGTGCAGAGAGACCTTaGAAAATATTAAGGGAAATC +
Preference number: 5 (lower is better)
Translates to: SMALASASGEGLTKLTIMSAERP*KILREI
Trigger: GATTTCCCTTAATATTTTCAAAGGTCTCTCTGCACT...CATGATTGTAAGCTTCGTGAGGCCCTCACCAGAAGCAGATGCCAGCGCCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS CCA 90 bp ATGATCTCTGAAGAGCTCTCAAAAGCAGTCACAGTCCCAGGAGGCTaGTCCTCTAAGAATCATTTTGGGACTCTTCGGAGTTCATTCATC +
Preference number: 5 (lower is better)
Translates to: MISEELSKAVTVPGG*SSKNHFGTLRSSFI
Trigger: GATGAATGAACTCCGAAGAGTCCCAAAATGATTCTTAGAGGACCAGCCTCCTGGGACTGTGACTGCTTTTGAGAGCTCTTCAGAGATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CAA 90 bp CCATCAATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGAGAGATGGTGCTGTATaGCCCTGGCCTCAAAGGGCG +
Preference number: 5 (lower is better)
Translates to: PSISCLNLVPRVKCSMLGRDGAV*PWPQRA
Trigger: CGCCCTTTGAGGCCAGGGCAATACAGCACCATCTCT...CCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATATTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp AAACCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGGACCAGCTGGCTACTTaGGGTATGTCAATCCTATCC +
Preference number: 5 (lower is better)
Translates to: KPYHHLRMVHYRSQKLTEDQLAT*GMSILS
Trigger: GGATAGGATTGACATACCCAAAGTAGCCAGCTGGTC...CTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CAA 90 bp GAACTCACTCATTACTATGGGGATGGCACAAAGTCATACATAAGGGATCCGCCCACTGAATGTCACACTTaGAACATGAGATTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: ELTHYYGDGTKSYIRDPPTECHT*NMRFGG
Trigger: CCCTCCAAATCTCATGTTCAAAGTGTGACATTCAGT...GGGCGGATCCCTTATGTATGACTTTGTGCCATCCCCATAGTAATGAGTGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp GAACTCACTCATTACTATGGGGATGGCACAAAGTCATACATAAGGGATCCGCCCTTAATATATGGTTCTTaGGGTTGGGTCATACTGCCC +
Preference number: 5 (lower is better)
Translates to: ELTHYYGDGTKSYIRDPPLIYGS*GWVILP
Trigger: GGGCAGTATGACCCAACCCAAAGAACCATATATTAA...GGGCGGATCCCTTATGTATGACTTTGTGCCATCCCCATAGTAATGAGTGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CAA 90 bp ATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGGTATTTAGAGATGGTGCTGTATaGCCCTGGCCTCAAAGGGCG +
Preference number: 5 (lower is better)
Translates to: ISCLNLVPRVKCSMLGVFRDGAV*PWPQRA
Trigger: CGCCCTTTGAGGCCAGGGCAATACAGCACCATCTCT...AAATACCCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp AGAGAGAGCAAGCGAGAGAGGAGGAAGTTCCAGGCTCTTTTAAACAACCAGCTCACTACTTGGTTCATATaGAACCTGAGGACAACTAAA +
Preference number: 5 (lower is better)
Translates to: RESKRERRKFQALLNNQLTTWFI*NLRTTK
Trigger: TTTAGTTGTCCTCAGGTTCAATATGAACCAAGTAGT...GAGCTGGTTGTTTAAAAGAGCCTGGAACTTCCTCCTCTCTCGCTTGCTCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp CCATCCTCAAATCAGATGTTTCTGATGCCTTCATCCAAATCACTGATTTTAAAAGTCACTGCTGCCATCTaGGTCCTTCTAGGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: PSSNQMFLMPSSKSLILKVTAAI*VLLGRG
Trigger: TCCCCTTCCTAGAAGGACCAAGATGGCAGCAGTGAC...TTTTAAAATCAGTGATTTGGATGAAGGCATCAGAAACATCTGATTTGAGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS CCA 90 bp TCTGGAAATTGCTGGTATCTTTGGAATTCTGCTTCCCATTCCTCTTaGCTTGTAGGTGGCTTCATCTCCTTTATTAAATGCCAATCTACC +
Preference number: 5 (lower is better)
Translates to: SGNCWYLWNSASHSS*LVGGFISFIKCQST
Trigger: GGTAGATTGGCATTTAATAAAGGAGATGAAGCCACCTACAAGCCAAGAGGAATGGGAAGCAGAATTCCAAAGATACCAGCAATTTCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp CCATCAATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGTCAAGGACAGGAATCTaGCTCTCTCTCCAGATGTTC +
Preference number: 5 (lower is better)
Translates to: PSISCLNLVPRVKCSMLGSRTGI*LSLQMF
Trigger: GAACATCTGGAGAGAGAGCAAGATTCCTGTCCTTGA...CCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATATTGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp ATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGGTATTTAAGGACAACCTGGGTTaGAGGATCAGGAGAGGATGG +
Preference number: 5 (lower is better)
Translates to: ISCLNLVPRVKCSMLGVFKDNLG*RIRRGW
Trigger: CCATCCTCTCCTGATCCTCAAACCCAGGTTGTCCTT...AAATACCCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CAA 90 bp CTTGCCTTCTACAGAACTAAAACTAACTTCCTGCAACTTTCATCCATTGCTGCCTGGGACTGTTTTCAGTaGCCACTGTCATCTATTATA +
Preference number: 5 (lower is better)
Translates to: LAFYRTKTNFLQLSSIAAWDCFQ*PLSSII
Trigger: TATAATAGATGACAGTGGCAACTGAAAACAGTCCCA...GGCAGCAATGGATGAAAGTTGCAGGAAGTTAGTTTTAGTTCTGTAGAAGGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp CCATCCTCAAATCAGATGTTTCTGATGCCTTCATCCAAATCACTGATTTTAAAACAGTGGTCCCTAGACTaGTCTGCACATTGGAATCAC +
Preference number: 5 (lower is better)
Translates to: PSSNQMFLMPSSKSLILKQWSLD*SAHWNH
Trigger: GTGATTCCAATGTGCAGACAAGTCTAGGGACCACTG...TTTTAAAATCAGTGATTTGGATGAAGGCATCAGAAACATCTGATTTGAGGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CAA 90 bp CCATATCACCACCTGAGAATGGTACACTACAGGTCACAGAAACTTACAGAGTACGCTAAATGCAACCAGTaGTTTTTCCAAATGTACTCA +
Preference number: 5 (lower is better)
Translates to: PYHHLRMVHYRSQKLTEYAKCNQ*FFQMYS
Trigger: TGAGTACATTTGGAAAAACAACTGGTTGCATTTAGC...GTACTCTGTAAGTTTCTGTGACCTGTAGTGTACCATTCTCAGGTGGTGATATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CAA 90 bp CCATCAATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGTGGGACTGTTTTCAGTaGCCACTGTCATCTATTATA +
Preference number: 5 (lower is better)
Translates to: PSISCLNLVPRVKCSMLGWDCFQ*PLSSII
Trigger: TATAATAGATGACAGTGGCAACTGAAAACAGTCCCA...CCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATATTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp AAGAAAAGAGGTTTATTTGGCTCACTGTTCTGCATAGAACTGTATAGGAAGCATCCTGTGTTAGTCGGCTaGCATTGCTATAAGGAAATA +
Preference number: 5 (lower is better)
Translates to: KKRGLFGSLFCIELYRKHPVLVG*HCYKEI
Trigger: TATTTCCTTATAGCAATGCAAGCCGACTAACACAGG...ATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CAA 90 bp ATATCTTGCTTAAATTTGGTACCCAGAGTGAAATGCAGTATGTTAGGGGTATTTACTGAATGTCACACTTaGAACATGAGATTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: ISCLNLVPRVKCSMLGVFTECHT*NMRFGG
Trigger: CCCTCCAAATCTCATGTTCAAAGTGTGACATTCAGT...AAATACCCCTAACATACTGCATTTCACTCTGGGTACCAAATTTAAGCAAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS-3UTR CAA 90 bp AAGAAAAGAGGTTTATTTGGCTCACTGTTCTGCATAGAACTGTATAGGAAGCATTACAGTTCCCTTTCTTaGAAGGATTCTATCCAGAAG +
Preference number: 5 (lower is better)
Translates to: KKRGLFGSLFCIELYRKHYSSLS*KDSIQK
Trigger: CTTCTGGATAGAATCCTTCAAAGAAAGGGAACTGTA...ATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS-3UTR CAA 90 bp AAGAAAAGAGGTTTATTTGGCTCACTGTTCTGCATAGAACTGTATAGGAAGCATACTACTTGGTTCATATaGAACCTGAGGACAACTAAA +
Preference number: 5 (lower is better)
Translates to: KKRGLFGSLFCIELYRKHTTWFI*NLRTTK
Trigger: TTTAGTTGTCCTCAGGTTCAATATGAACCAAGTAGT...ATGCTTCCTATACAGTTCTATGCAGAACAGTGAGCCAAATAAACCTCTTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS GCA 72 bp CTAGGCGCTGCCCTAGGAGCCAGGAGCGGCAGATACTaGCTCCCCTTCAAGGCCCTCAACGGCGGAAAGAGC +
Preference number: 6 (lower is better)
Translates to: LGAALGARSGRY*LPFKALNGGKS
Trigger: GCTCTTTCCGCCGTTGAGGGCCTTGAAGGGGAGGCAGTATCTGCCGCTCCTGGCTCCTAGGGCAGCGCCTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS GCA 72 bp AGGGCGCCTGATGCAATCACACTGTGCTCTAGGCGCTaGCCTAGGAGCCAGGAGCGGCAGATACTGCCTCCC +
Preference number: 6 (lower is better)
Translates to: RAPDAITLCSRR*PRSQERQILPP
Trigger: GGGAGGCAGTATCTGCCGCTCCTGGCTCCTAGGGCAGCGCCTAGAGCACAGTGTGATTGCATCAGGCGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS CAA 72 bp CCAGGAGCCATCGGCCCACCACCCGCTCAGCAGCCTTaGAGGGAAGGGACACTGTACCCCTTCCAGATTGCA +
Preference number: 6 (lower is better)
Translates to: PGAIGPPPAQQP*REGTLYPFQIA
Trigger: TGCAATCTGGAAGGGGTACAGTGTCCCTTCCCTCAAAGGCTGCTGAGCGGGTGGTGGGCCGATGGCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS TCA 72 bp CAGGAGCCATCGGCCCACCACCCGCTCAGCAGCCTTTaGGGGAAGGGACACTGTACCCCTTCCAGATTGCAA +
Preference number: 6 (lower is better)
Translates to: QEPSAHHPLSSL*GKGHCTPSRLQ
Trigger: TTGCAATCTGGAAGGGGTACAGTGTCCCTTCCCTCAAAGGCTGCTGAGCGGGTGGTGGGCCGATGGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS CAA 90 bp CACTGCAGACCAGGAGCCATCGGCCCACCACCCGCTCAGCAGCCTTaGAGGGAAGGGACACTGTACCCCTTCCAGATTGCAAAGCTACTT +
Preference number: 6 (lower is better)
Translates to: HCRPGAIGPPPAQQP*REGTLYPFQIAKLL
Trigger: AAGTAGCTTTGCAATCTGGAAGGGGTACAGTGTCCCTTCCCTCAAAGGCTGCTGAGCGGGTGGTGGGCCGATGGCTCCTGGTCTGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS TCA 72 bp ACCAGGGCTGATCCCAGGTGGGCAGCAAGGCGGTACTaGCTGACCCGAGGGATGTCATGGGAGTCTGATTTT +
Preference number: 6 (lower is better)
Translates to: TRADPRWAARRY*LTRGMSWESDF
Trigger: AAAATCAGACTCCCATGACATCCCTCGGGTCAGTCAGTACCGCCTTGCTGCCCACCTGGGATCAGCCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS TCA 72 bp CGGCCAGAGGAGTTGGGACATACATCAGCAGCGTGCTaGTGCCCAAGCCCACCTGTGTATACGCCAAAGCCA +
Preference number: 6 (lower is better)
Translates to: RPEELGHTSAAC*CPSPPVYTPKP
Trigger: TGGCTTTGGCGTATACACAGGTGGGCTTGGGCATCAGCACGCTGCTGATGTATGTCCCAACTCCTCTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000497381.1
CDS TCA 72 bp CACAGAGGGCAAGAACACGTCCTTTCATGCCACGGCTaGGCCAGCCCTTTCTCCAAAAGTAGGCAGCAGGCA +
Preference number: 6 (lower is better)
Translates to: HRGQEHVLSCHG*ASPFSKSRQQA
Trigger: TGCCTGCTGCCTACTTTTGGAGAAAGGGCTGGCTCAGCCGTGGCATGAAAGGACGTGTTCTTGCCCTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS TCA 72 bp GGGCTGATCCCAGGTGGGCAGCAAGGCGGTACTGACTaGCCCGAGGGATGTCATGGGAGTCTGATTTTTCTT +
Preference number: 6 (lower is better)
Translates to: GLIPGGQQGGTD*PEGCHGSLIFL
Trigger: AAGAAAAATCAGACTCCCATGACATCCCTCGGGTCAGTCAGTACCGCCTTGCTGCCCACCTGGGATCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS GCA 72 bp CCCTTCAAGGCCCTCAACGGCGGAAAGAGCAATCGCTaGATACTGATGACAGGGAACAGCCACCTCTTCCAC +
Preference number: 6 (lower is better)
Translates to: PFKALNGGKSNR*ILMTGNSHLFH
Trigger: GTGGAAGAGGTGGCTGTTCCCTGTCATCAGTATGCAGCGATTGCTCTTTCCGCCGTTGAGGGCCTTGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS GCA 72 bp GCCCTGTGTATACGCCAAAGCCAGCAGAGTCACTGCTaGCATCTTGGTCCTTCTAGGAAGGGGAATTCTCCG +
Preference number: 6 (lower is better)
Translates to: ALCIRQSQQSHC*HLGPSRKGNSP
Trigger: CGGAGAATTCCCCTTCCTAGAAGGACCAAGATGGCAGCAGTGACTCTGCTGGCTTTGGCGTATACACAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370483.9
CDS GCA 72 bp GAAGTACTTTCCTGTACCAGTCACAGAGAACCTCCCTaGAGTCCCAGCCTGATCACTCCTCCACAGGCTGTC +
Preference number: 6 (lower is better)
Translates to: EVLSCTSHREPP*SPSLITPPQAV
Trigger: GACAGCCTGTGGAGGAGTGATCAGGCTGGGACTGCAGGGAGGTTCTCTGTGACTGGTACAGGAAAGTACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497381.1
CDS GCA 72 bp GCCCACCTGTGTATACGCCAAAGCCAGCAGAGTCACTaGTGCCATCTTGGTCCTTCTAGGAAGGGGAATTCT +
Preference number: 6 (lower is better)
Translates to: AHLCIRQSQQSH*CHLGPSRKGNS
Trigger: AGAATTCCCCTTCCTAGAAGGACCAAGATGGCAGCAGTGACTCTGCTGGCTTTGGCGTATACACAGGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000497381.1
CDS GCA 72 bp AGGGCCCTGTGTATACGCCAAAGCCAGCAGAGTCACTaGTGCCATCTTGGTCCTTCTAGGAAGGGGAATTCT +
Preference number: 6 (lower is better)
Translates to: RALCIRQSQQSH*CHLGPSRKGNS
Trigger: AGAATTCCCCTTCCTAGAAGGACCAAGATGGCAGCAGTGACTCTGCTGGCTTTGGCGTATACACAGGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370483.9
CDS CAA 72 bp GTATACGCCAAAGCCAGCAGAGTCACTGCTGCCATCTaGGTCCTTCTAGGAAGGGGAATTCTCCGAGAGAGG +
Preference number: 6 (lower is better)
Translates to: VYAKASRVTAAI*VLLGRGILRER
Trigger: CCTCTCTCGGAGAATTCCCCTTCCTAGAAGGACCAAGATGGCAGCAGTGACTCTGCTGGCTTTGGCGTATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000016171.6
ENST00000370483.9
ENST00000497381.1
CDS TCA 72 bp GAGAGGGCCGTAAGGAACACCAGACCTGCTGTTCCATaGGCAAATCGTCTCAACTGTAGGAGTTGGTGGGTT +
Preference number: 6 (lower is better)
Translates to: ERAVRNTRPAVP*ANRLNCRSWWV
Trigger: AACCCACCAACTCCTACAGTTGAGACGATTTGCTCATGGAACAGCAGGTCTGGTGTTCCTTACGGCCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS CCA 72 bp TTGCAAAGCTACTTCAGAGATGGTGCTGTATTGCCCTaGCCTCAAAGGGCGCCTGATGCAATCACACTGTGC +
Preference number: 6 (lower is better)
Translates to: LQSYFRDGAVLP*PQRAPDAITLC
Trigger: GCACAGTGTGATTGCATCAGGCGCCCTTTGAGGCCAGGGCAATACAGCACCATCTCTGAAGTAGCTTTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS GCA 72 bp GCCTTTGAGGGAAGGGACACTGTACCCCTTCCAGATTaGAAAGCTACTTCAGAGATGGTGCTGTATTGCCCT +
Preference number: 6 (lower is better)
Translates to: AFEGRDTVPLPD*KATSEMVLYCP
Trigger: AGGGCAATACAGCACCATCTCTGAAGTAGCTTTGCAATCTGGAAGGGGTACAGTGTCCCTTCCCTCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS GCA 72 bp AGACTCTGTCAACCTAGTTACTCCACCAAGAATAACTaGTCCAGCCACTGTTCCACTGCAGACCAGGAGCCA +
Preference number: 6 (lower is better)
Translates to: RLCQPSYSTKNN*SSHCSTADQEP
Trigger: TGGCTCCTGGTCTGCAGTGGAACAGTGGCTGGAGCAGTTATTCTTGGTGGAGTAACTAGGTTGACAGAGTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS CAA 72 bp TCCAGATTGCAAAGCTACTTCAGAGATGGTGCTGTATaGCCCTGGCCTCAAAGGGCGCCTGATGCAATCACA +
Preference number: 6 (lower is better)
Translates to: SRLQSYFRDGAV*PWPQRAPDAIT
Trigger: TGTGATTGCATCAGGCGCCCTTTGAGGCCAGGGCAATACAGCACCATCTCTGAAGTAGCTTTGCAATCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS CCA 72 bp GAAGAGCTCTCAAAAGCAGTCACAGTCCCAGGAGGCTaGTCCTCTAAGAATCATTTTGGGACTCTTCGGAGT +
Preference number: 6 (lower is better)
Translates to: EELSKAVTVPGG*SSKNHFGTLRS
Trigger: ACTCCGAAGAGTCCCAAAATGATTCTTAGAGGACCAGCCTCCTGGGACTGTGACTGCTTTTGAGAGCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000016171.6
CDS TCA 72 bp GTACACAAGGCCTACAAGGCGACCCCACATTCGGTGTaGGTACTCCATGTACCAGATGAACTTGAATTCTGT +
Preference number: 6 (lower is better)
Translates to: VHKAYKATPHSV*VLHVPDELEFC
Trigger: ACAGAATTCAAGTTCATCTGGTACATGGAGTACTCACACCGAATGTGGGGTCGCCTTGTAGGCCTTGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9
CDS CAA 90 bp CATATCATGATTCAAGATTTTAAATTCTGGAAATTGCTGGTATCTTaGGAATTCTGCTTCCCATTCCTCTTGGCTTGTAGGTGGCTTCAT +
Preference number: 6 (lower is better)
Translates to: HIMIQDFKFWKLLVS*EFCFPFLLACRWLH
Trigger: ATGAAGCCACCTACAAGCCAAGAGGAATGGGAAGCAGAATTCCAAAGATACCAGCAATTTCCAGAATTTAAAATCTTGAATCATGATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000016171.6
ENST00000370483.9