Pregenerated sensors for COX11 (Homo sapiens)
Ensembl gene IDs: ENSG00000166260Ensembl transcript IDs: ENST00000299335.8, ENST00000571584.1, ENST00000572088.1, ENST00000572558.5, ENST00000573912.1, ENST00000574821.1, ENST00000576084.5, ENST00000576370.5
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCCCTATGGAAGAAGCACATTCTTACCTTTCTTCTACTAGACTGTaGCTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: SPMEEAHSYLSSTRL*LSSFPVKTRELSRN Trigger: ATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAGTCACAGTCTAGTAGAAGAAAGGTAAGAATGTGCTTCTTCCATAGGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299335.8 |
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| 3UTR TCA 90 bp | GAAATTGATGCTCACCAGCACAAAGGAGCTCAAAATGATGGTGACTaGGGTAAAGACTTCAACTTATACAACTTAATTCCATATTCCATA | + |
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Preference number: 1 (lower is better) Translates to: EIDAHQHKGAQNDGD*GKDFNLYNLIPYSI Trigger: TATGGAATATGGAATTAAGTTGTATAAGTTGAAGTCTTTACCTCAGTCACCATCATTTTGAGCTCCTTTGTGCTGGTGAGCATCAATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299335.8 |
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| 3UTR TCA 72 bp | GAAGAAGCACATTCTTACCTTTCTTCTACTAGACTGTaGCTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: EEAHSYLSSTRL*LSSFPVKTREL Trigger: TAACTCTCTTGTCTTTACTGGGAAGCTGGAGAGTCACAGTCTAGTAGAAGAAAGGTAAGAATGTGCTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299335.8 |
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| 3UTR TCA 72 bp | GCTCACCAGCACAAAGGAGCTCAAAATGATGGTGACTaGGGTAAAGACTTCAACTTATACAACTTAATTCCA | + |
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Preference number: 3 (lower is better) Translates to: AHQHKGAQNDGD*GKDFNLYNLIP Trigger: TGGAATTAAGTTGTATAAGTTGAAGTCTTTACCTCAGTCACCATCATTTTGAGCTCCTTTGTGCTGGTGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299335.8 |
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| 3UTR TCA 72 bp | CCATCTGAGTCTGACACTTTGAAATATGAGTTCCCCTaGATCATTCAAATTGTGCTGAACCATTGTTCACTA | + |
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Preference number: 3 (lower is better) Translates to: PSESDTLKYEFP*IIQIVLNHCSL Trigger: TAGTGAACAATGGTTCAGCACAATTTGAATGATTCAGGGGAACTCATATTTCAAAGTGTCAGACTCAGATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299335.8 |
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| CDS-3UTR TCA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAATCTTCTACTAGACTGTaGCTCTCCAGCTTCCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: LSSFPVKTRELSRNGERESSTRL*LSSFPV Trigger: TACTGGGAAGCTGGAGAGTCACAGTCTAGTAGAAGA...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000299335.8 ENST00000572558.5 ENST00000574821.1 ENST00000576370.5 |
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| CDS-3UTR TCA 90 bp | TTCTTTAGGGGCCAGGATCAGAAAGCGTTCTTCTGTAACTTCTTCATGTTGACCTCTTCTACTAGACTGTaGCTCTCCAGCTTCCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: FFRGQDQKAFFCNFFMLTSSTRL*LSSFPV Trigger: TACTGGGAAGCTGGAGAGTCACAGTCTAGTAGAAGA...GGTCAACATGAAGAAGTTACAGAAGAACGCTTTCTGATCCTGGCCCCTAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000572558.5 ENST00000574821.1 ENST00000576370.5 |
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| CDS-3UTR TCA 90 bp | CAGAAAGCGTTCTTCTGTAACTTCTTCATGTTGACCAGGGACACTGTATCCAGATCTTCTACTAGACTGTaGCTCTCCAGCTTCCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: QKAFFCNFFMLTRDTVSRSSTRL*LSSFPV Trigger: TACTGGGAAGCTGGAGAGTCACAGTCTAGTAGAAGA...TCTGGATACAGTGTCCCTGGTCAACATGAAGAAGTTACAGAAGAACGCTTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572558.5 ENST00000574821.1 ENST00000576370.5 |
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| CDS-3UTR TCA 90 bp | CAGAAAGCGTTCTTCTGTAACTTCTTCATGTTGACCAGGGACACTGTATCCAGAGTAACTTCTTCATGTTaGCCAGGGACACTGTATCCA | + |
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Preference number: 4 (lower is better) Translates to: QKAFFCNFFMLTRDTVSRVTSSC*PGTLYP Trigger: TGGATACAGTGTCCCTGGTCAACATGAAGAAGTTAC...TCTGGATACAGTGTCCCTGGTCAACATGAAGAAGTTACAGAAGAACGCTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572558.5 ENST00000574821.1 ENST00000576370.5 |
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| CDS-3UTR TCA 90 bp | TTCTTTAGGGGCCAGGATCAGAAAGCGTTCTTCTGTAACTTCTTCATGTTGACCGTAACTTCTTCATGTTaGCCAGGGACACTGTATCCA | + |
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Preference number: 4 (lower is better) Translates to: FFRGQDQKAFFCNFFMLTVTSSC*PGTLYP Trigger: TGGATACAGTGTCCCTGGTCAACATGAAGAAGTTAC...GGTCAACATGAAGAAGTTACAGAAGAACGCTTTCTGATCCTGGCCCCTAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000572558.5 ENST00000574821.1 ENST00000576370.5 |
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| CDS-3UTR CCA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAACAGTGCAGTCTCTCCTaGCACCACATATATTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LSSFPVKTRELSRNGEREQCSLS*HHIYFC Trigger: ACAGAAATATATGTGGTGCCAGGAGAGACTGCACTG...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000299335.8 ENST00000572558.5 ENST00000576370.5 |
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| CDS-3UTR CCA 90 bp | CAGGATCAGAAAGCGTTCTTCTGTAACTTCTTCATGTTGACCAGGGACACTGTACAGTGCAGTCTCTCCTaGCACCACATATATTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QDQKAFFCNFFMLTRDTVQCSLS*HHIYFC Trigger: ACAGAAATATATGTGGTGCCAGGAGAGACTGCACTG...TACAGTGTCCCTGGTCAACATGAAGAAGTTACAGAAGAACGCTTTCTGATCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000572558.5 ENST00000576370.5 |
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| 3UTR CAA 72 bp | CAGGATCAGAAAGCGTTCTTCTGTAACTTCTTCATGTaGACCAGGGACACTGTATCCAGAGATGTTAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: QDQKAFFCNFFM*TRDTVSRDVRG Trigger: TCCTCTAACATCTCTGGATACAGTGTCCCTGGTCAACATGAAGAAGTTACAGAAGAACGCTTTCTGATCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572558.5 ENST00000574821.1 ENST00000576370.5 |
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| CDS-3UTR TCA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAAAAGAGAAGGACAGGATaGATACTGGCCATTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSSFPVKTRELSRNGEREKRRTG*ILAIFF Trigger: GAAGAAAATGGCCAGTATTCATCCTGTCCTTCTCTT...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000299335.8 ENST00000572558.5 ENST00000574821.1 ENST00000576370.5 |
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| CDS-3UTR TCA 90 bp | CAGGATCAGAAAGCGTTCTTCTGTAACTTCTTCATGTTGACCAGGGACACTGTAAAGAGAAGGACAGGATaGATACTGGCCATTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QDQKAFFCNFFMLTRDTVKRRTG*ILAIFF Trigger: GAAGAAAATGGCCAGTATTCATCCTGTCCTTCTCTT...TACAGTGTCCCTGGTCAACATGAAGAAGTTACAGAAGAACGCTTTCTGATCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000572558.5 ENST00000574821.1 ENST00000576370.5 |
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| CDS-3UTR TCA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAACTGAGTCTGACACTTTaGAATATGAGTTCCCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LSSFPVKTRELSRNGERELSLTL*NMSSPE Trigger: TTCAGGGGAACTCATATTTCAAAGTGTCAGACTCAG...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299335.8 |
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| CDS-3UTR TCA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAATACTCATATGTAGCCTaGACTCCAAAACCAGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: LSSFPVKTRELSRNGEREYSYVA*TPKPAQ Trigger: TTGAGCTGGTTTTGGAGTTCAGGCTACATATGAGTA...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299335.8 |
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| CDS-3UTR GCA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAACACTGGAGACTTGCATaGACATCTGCATTAAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: LSSFPVKTRELSRNGEREHWRLA*TSALKL Trigger: TAGCTTTAATGCAGATGTGCATGCAAGTCTCCAGTG...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000299335.8 ENST00000572558.5 ENST00000576370.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTAGGGGCCAGGATCAGAAAGCGTTCTTCTGTAACTTCTTCATGTTGACCCACTGGAGACTTGCATaGACATCTGCATTAAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: FFRGQDQKAFFCNFFMLTHWRLA*TSALKL Trigger: TAGCTTTAATGCAGATGTGCATGCAAGTCTCCAGTG...GGTCAACATGAAGAAGTTACAGAAGAACGCTTTCTGATCCTGGCCCCTAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000572558.5 ENST00000576370.5 |
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| CDS-3UTR GCA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAAGCCAACCAATTTAACTaGAGTGTCATGTTTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: LSSFPVKTRELSRNGEREANQFN*SVMFHR Trigger: CCTGTGAAACATGACACTGCAGTTAAATTGGTTGGC...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299335.8 ENST00000576370.5 |
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| CDS-3UTR GCA 90 bp | CAGGATCAGAAAGCGTTCTTCTGTAACTTCTTCATGTTGACCAGGGACACTGTAGCCAACCAATTTAACTaGAGTGTCATGTTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QDQKAFFCNFFMLTRDTVANQFN*SVMFHR Trigger: CCTGTGAAACATGACACTGCAGTTAAATTGGTTGGC...TACAGTGTCCCTGGTCAACATGAAGAAGTTACAGAAGAACGCTTTCTGATCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576370.5 |
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| CDS-3UTR CCA 90 bp | AAAGCGTTCTTCTGTAACTTCTTCATGTTGACCAGGGACACTGTATCCAGAGATCAGTGCAGTCTCTCCTaGCACCACATATATTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: KAFFCNFFMLTRDTVSRDQCSLS*HHIYFC Trigger: ACAGAAATATATGTGGTGCCAGGAGAGACTGCACTG...ATCTCTGGATACAGTGTCCCTGGTCAACATGAAGAAGTTACAGAAGAACGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000572558.5 ENST00000576370.5 |
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| CDS-3UTR CCA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAAACTTCAATTATATCCTaGAACTGGCAACTTGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LSSFPVKTRELSRNGERETSIIS*NWQLVP Trigger: GGGCACAAGTTGCCAGTTCCAGGATATAATTGAAGT...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299335.8 ENST00000576370.5 |
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| CDS-3UTR CCA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAAAGAGTTATCAAGGAATaGGGAAAGAGAAGGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: LSSFPVKTRELSRNGERERVIKE*GKRRTG Trigger: TCCTGTCCTTCTCTTTCCCCATTCCTTGATAACTCT...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000299335.8 ENST00000572558.5 ENST00000574821.1 ENST00000576370.5 |
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| CDS-3UTR CCA 90 bp | CAGAAAGCGTTCTTCTGTAACTTCTTCATGTTGACCAGGGACACTGTATCCAGAAGAGTTATCAAGGAATaGGGAAAGAGAAGGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: QKAFFCNFFMLTRDTVSRRVIKE*GKRRTG Trigger: TCCTGTCCTTCTCTTTCCCCATTCCTTGATAACTCT...TCTGGATACAGTGTCCCTGGTCAACATGAAGAAGTTACAGAAGAACGCTTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572558.5 ENST00000574821.1 ENST00000576370.5 |
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| CDS-3UTR CCA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAATTATACCCTCCCCTATaGAAGAAGCACATTCTTACC | + |
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Preference number: 4 (lower is better) Translates to: LSSFPVKTRELSRNGERELYPPL*KKHILT Trigger: GGTAAGAATGTGCTTCTTCCATAGGGGAGGGTATAA...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299335.8 |
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| CDS-3UTR TCA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAAGAGATGTTAGAGGAGTaGAAATCTCTAGGCACTAAA | + |
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Preference number: 4 (lower is better) Translates to: LSSFPVKTRELSRNGEREEMLEE*KSLGTK Trigger: TTTAGTGCCTAGAGATTTTCACTCCTCTAACATCTC...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000572558.5 ENST00000574821.1 ENST00000576370.5 |
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| CDS-3UTR TCA 90 bp | CAGAAAGCGTTCTTCTGTAACTTCTTCATGTTGACCAGGGACACTGTATCCAGAGAGATGTTAGAGGAGTaGAAATCTCTAGGCACTAAA | + |
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Preference number: 4 (lower is better) Translates to: QKAFFCNFFMLTRDTVSREMLEE*KSLGTK Trigger: TTTAGTGCCTAGAGATTTTCACTCCTCTAACATCTC...TCTGGATACAGTGTCCCTGGTCAACATGAAGAAGTTACAGAAGAACGCTTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572558.5 ENST00000574821.1 ENST00000576370.5 |
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| CDS-3UTR TCA 90 bp | TTCTTTAGGGGCCAGGATCAGAAAGCGTTCTTCTGTAACTTCTTCATGTTGACCGACTCTGTGCAGCTTTaGAGCCTGTATTTTATTGAA | + |
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Preference number: 4 (lower is better) Translates to: FFRGQDQKAFFCNFFMLTDSVQL*SLYFIE Trigger: TTCAATAAAATACAGGCTTCAAAGCTGCACAGAGTC...GGTCAACATGAAGAAGTTACAGAAGAACGCTTTCTGATCCTGGCCCCTAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572558.5 |
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| CDS-3UTR CCA 90 bp | AAAGCGTTCTTCTGTAACTTCTTCATGTTGACCAGGGACACTGTATCCAGAGATACTTCAATTATATCCTaGAACTGGCAACTTGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: KAFFCNFFMLTRDTVSRDTSIIS*NWQLVP Trigger: GGGCACAAGTTGCCAGTTCCAGGATATAATTGAAGT...ATCTCTGGATACAGTGTCCCTGGTCAACATGAAGAAGTTACAGAAGAACGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576370.5 |
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| CDS-3UTR CCA 90 bp | AAAGCGTTCTTCTGTAACTTCTTCATGTTGACCAGGGACACTGTATCCAGAGATAGAGTTATCAAGGAATaGGGAAAGAGAAGGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: KAFFCNFFMLTRDTVSRDRVIKE*GKRRTG Trigger: TCCTGTCCTTCTCTTTCCCCATTCCTTGATAACTCT...ATCTCTGGATACAGTGTCCCTGGTCAACATGAAGAAGTTACAGAAGAACGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572558.5 ENST00000574821.1 ENST00000576370.5 |
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| CDS-3UTR TCA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAAAAATATGAGTTCCCCTaGATCATTCAAATTGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSSFPVKTRELSRNGEREKYEFP*IIQIVL Trigger: CAGCACAATTTGAATGATTCAGGGGAACTCATATTT...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299335.8 |
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| CDS-3UTR CCA 90 bp | TATCCATTTGGTTTGGTTCTCAATCTCTGCATAGCAGGTATAGATAGTGAAGAACAGTGCAGTCTCTCCTaGCACCACATATATTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: YPFGLVLNLCIAGIDSEEQCSLS*HHIYFC Trigger: ACAGAAATATATGTGGTGCCAGGAGAGACTGCACTG...TTCTTCACTATCTATACCTGCTATGCAGAGATTGAGAACCAAACCAAATGGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571584.1 |
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| CDS-3UTR CCA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAAAATGTAGAAAAACACTaGCATATCTACTTCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LSSFPVKTRELSRNGERENVEKH*HIYFLL Trigger: CAAGAGGAAGTAGATATGCCAGTGTTTTTCTACATT...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000299335.8 ENST00000576370.5 |
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| CDS-3UTR CCA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAAGTAAATAGTAAGGCTTaGGAATACAGTAGTTTATGG | + |
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Preference number: 4 (lower is better) Translates to: LSSFPVKTRELSRNGEREVNSKA*EYSSLW Trigger: CCATAAACTACTGTATTCCCAAGCCTTACTATTTAC...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299335.8 |
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| CDS-3UTR GCA 90 bp | TATCCATTTGGTTTGGTTCTCAATCTCTGCATAGCAGGTATAGATAGTGAAGAACACTGGAGACTTGCATaGACATCTGCATTAAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: YPFGLVLNLCIAGIDSEEHWRLA*TSALKL Trigger: TAGCTTTAATGCAGATGTGCATGCAAGTCTCCAGTG...TTCTTCACTATCTATACCTGCTATGCAGAGATTGAGAACCAAACCAAATGGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571584.1 |
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| CDS-3UTR GCA 90 bp | TATCCATTTGGTTTGGTTCTCAATCTCTGCATAGCAGGTATAGATAGTGAAGAATTGGTTCTCAATCTCTaGATAGCAGGTATAGATAGT | + |
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Preference number: 4 (lower is better) Translates to: YPFGLVLNLCIAGIDSEELVLNL*IAGIDS Trigger: ACTATCTATACCTGCTATGCAGAGATTGAGAACCAA...TTCTTCACTATCTATACCTGCTATGCAGAGATTGAGAACCAAACCAAATGGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571584.1 |
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| CDS-3UTR CCA 90 bp | TATCCATTTGGTTTGGTTCTCAATCTCTGCATAGCAGGTATAGATAGTGAAGAAAAGCAGATATCCATTTaGTTTGGTTCTCAATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: YPFGLVLNLCIAGIDSEEKQISI*FGSQSL Trigger: CAGAGATTGAGAACCAAACCAAATGGATATCTGCTT...TTCTTCACTATCTATACCTGCTATGCAGAGATTGAGAACCAAACCAAATGGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571584.1 |
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| CDS-3UTR GCA 90 bp | TATCCATTTGGTTTGGTTCTCAATCTCTGCATAGCAGGTATAGATAGTGAAGAACATCTCAATGAGTTCTaGTTTAAGGATGAAGAACAA | + |
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Preference number: 4 (lower is better) Translates to: YPFGLVLNLCIAGIDSEEHLNEF*FKDEEQ Trigger: TTGTTCTTCATCCTTAAAGCAGAACTCATTGAGATG...TTCTTCACTATCTATACCTGCTATGCAGAGATTGAGAACCAAACCAAATGGATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571584.1 |
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| CDS GCA 90 bp | GAGGGCCTGGCAAATACAGAACGGGCCCTTGCTTTTCCCTGGAGGTaGAGAGGGTACCATTTCCAAGAAGGTGGACTATGCCCCTGTATT | + |
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Preference number: 5 (lower is better) Translates to: EGLANTERALAFPWR*RGYHFQEGGLCPCI Trigger: AATACAGGGGCATAGTCCACCTTCTTGGAAATGGTACCCTCTGCACCTCCAGGGAAAAGCAAGGGCCCGTTCTGTATTTGCCAGGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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| CDS-3UTR CAA 90 bp | TTCTTTAGGGGCCAGGATCAGAAAGCGTTCTTCTGTAACTTCTTCATGTTGACCTGTAACTTCTTCATGTaGACCAGGGACACTGTATCC | + |
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Preference number: 5 (lower is better) Translates to: FFRGQDQKAFFCNFFMLTCNFFM*TRDTVS Trigger: GGATACAGTGTCCCTGGTCAACATGAAGAAGTTACA...GGTCAACATGAAGAAGTTACAGAAGAACGCTTTCTGATCCTGGCCCCTAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000572558.5 ENST00000574821.1 ENST00000576370.5 |
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| CDS-3UTR CAA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAATGTAACTTCTTCATGTaGACCAGGGACACTGTATCC | + |
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Preference number: 5 (lower is better) Translates to: LSSFPVKTRELSRNGERECNFFM*TRDTVS Trigger: GGATACAGTGTCCCTGGTCAACATGAAGAAGTTACA...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000572558.5 ENST00000574821.1 ENST00000576370.5 |
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| CDS TCA 90 bp | GAGGCTTGGGCATGGACCTTCCTAATGTTAACTTCCTATTTCCCCTaGGGTATTTATTCAGGTACAGCAAGAGGAATTAATAACTGCACA | + |
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Preference number: 5 (lower is better) Translates to: EAWAWTFLMLTSYFP*GIYSGTARGINNCT Trigger: TGTGCAGTTATTAATTCCTCTTGCTGTACCTGAATAAATACCTCAGGGGAAATAGGAAGTTAACATTAGGAAGGTCCATGCCCAAGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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| CDS GCA 90 bp | TGTATTACAGTAATATATCATTTGCTTTTTGGTCATGGGTGGATATaGAGTTTCCATTGCCAGAGGAGGCACCCTAACAAGCTCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: CITVIYHLLFGHGWI*SFHCQRRHPNKLSF Trigger: GAAGGAGAGCTTGTTAGGGTGCCTCCTCTGGCAATGGAAACTGCATATCCACCCATGACCAAAAAGCAAATGATATATTACTGTAATACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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| CDS-3UTR CAA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAATTGGGGATTAAGCCTTaGTTCTTCAAAACAGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: LSSFPVKTRELSRNGERELGIKP*FFKTEA Trigger: TGCTTCTGTTTTGAAGAACAAAGGCTTAATCCCCAA...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000299335.8 ENST00000576370.5 |
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| CDS-3UTR CAA 90 bp | CAGGATCAGAAAGCGTTCTTCTGTAACTTCTTCATGTTGACCAGGGACACTGTATTGGGGATTAAGCCTTaGTTCTTCAAAACAGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: QDQKAFFCNFFMLTRDTVLGIKP*FFKTEA Trigger: TGCTTCTGTTTTGAAGAACAAAGGCTTAATCCCCAA...TACAGTGTCCCTGGTCAACATGAAGAAGTTACAGAAGAACGCTTTCTGATCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000576370.5 |
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| CDS-3UTR CAA 90 bp | CTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTATCAAGGAATGGGGAAAGAGAAAATTGTGCTGAACCATaGTTCACTAATGAGAGTCAT | + |
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Preference number: 5 (lower is better) Translates to: LSSFPVKTRELSRNGERENCAEP*FTNESH Trigger: ATGACTCTCATTAGTGAACAATGGTTCAGCACAATT...TTCTCTTTCCCCATTCCTTGATAACTCTCTTGTCTTTACTGGGAAGCTGGAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299335.8 |
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| CDS-3UTR CAA 90 bp | TATCCATTTGGTTTGGTTCTCAATCTCTGCATAGCAGGTATAGATAGTGAAGAAAGATATCCATTTGGTTaGGTTCTCAATCTCTGCATA | + |
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Preference number: 5 (lower is better) Translates to: YPFGLVLNLCIAGIDSEERYPFG*VLNLCI Trigger: TATGCAGAGATTGAGAACCAAACCAAATGGATATCT...TTCTTCACTATCTATACCTGCTATGCAGAGATTGAGAACCAAACCAAATGGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571584.1 |
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| CDS-3UTR CAA 90 bp | TATCCATTTGGTTTGGTTCTCAATCTCTGCATAGCAGGTATAGATAGTGAAGAAAAAGCAGATATCCATTaGGTTTGGTTCTCAATCTCT | + |
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Preference number: 5 (lower is better) Translates to: YPFGLVLNLCIAGIDSEEKADIH*VWFSIS Trigger: AGAGATTGAGAACCAAACCAAATGGATATCTGCTTT...TTCTTCACTATCTATACCTGCTATGCAGAGATTGAGAACCAAACCAAATGGATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000571584.1 |
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| CDS TCA 72 bp | ACCCGAGCAAAACCTCTTTCTCCAACAGGCATGCTCTaGGTGGCAACAGTCACCCTCCAGGGTTATATGCGT | + |
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Preference number: 6 (lower is better) Translates to: TRAKPLSPTGML*VATVTLQGYMR Trigger: ACGCATATAACCCTGGAGGGTGACTGTTGCCACTCAGAGCATGCCTGTTGGAGAAAGAGGTTTTGCTCGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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| CDS GCA 72 bp | GCAAATACAGAACGGGCCCTTGCTTTTCCCTGGAGGTaGAGAGGGTACCATTTCCAAGAAGGTGGACTATGC | + |
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Preference number: 6 (lower is better) Translates to: ANTERALAFPWR*RGYHFQEGGLC Trigger: GCATAGTCCACCTTCTTGGAAATGGTACCCTCTGCACCTCCAGGGAAAAGCAAGGGCCCGTTCTGTATTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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| CDS CCA 72 bp | GTACCATTTCCAAGAAGGTGGACTATGCCCCTGTATTaGCCAAGGTTCCAGTCCCCGAGTAGAGTTAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: VPFPRRWTMPLY*PRFQSPSRVRG Trigger: CCCTCTAACTCTACTCGGGGACTGGAACCTTGGCCAATACAGGGGCATAGTCCACCTTCTTGGAAATGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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| CDS GCA 72 bp | CATAGACCCGAGCAAAACCTCTTTCTCCAACAGGCATaGTCTGAGTGGCAACAGTCACCCTCCAGGGTTATA | + |
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Preference number: 6 (lower is better) Translates to: HRPEQNLFLQQA*SEWQQSPSRVI Trigger: TATAACCCTGGAGGGTGACTGTTGCCACTCAGAGCATGCCTGTTGGAGAAAGAGGTTTTGCTCGGGTCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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| CDS TCA 72 bp | CTAGTTCACGACATTCTACGGTCTCTGCACACAGTCTaGGGGGCTTCCAAACTCTGGAGATTAATGATGACA | + |
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Preference number: 6 (lower is better) Translates to: LVHDILRSLHTV*GASKLWRLMMT Trigger: TGTCATCATTAATCTCCAGAGTTTGGAAGCCCCTCAGACTGTGTGCAGAGACCGTAGAATGTCGTGAACTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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| CDS TCA 72 bp | GTTGCAGTAAGTGACCCATATTCAGACCATCTCTTCTaGTCTAGGGAATACTGGAGCCAGGCTGTATTACAG | + |
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Preference number: 6 (lower is better) Translates to: VAVSDPYSDHLF*SREYWSQAVLQ Trigger: CTGTAATACAGCCTGGCTCCAGTATTCCCTAGATCAGAAGAGATGGTCTGAATATGGGTCACTTACTGCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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| CDS GCA 72 bp | GTAATATATCATTTGCTTTTTGGTCATGGGTGGATATaGAGTTTCCATTGCCAGAGGAGGCACCCTAACAAG | + |
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Preference number: 6 (lower is better) Translates to: VIYHLLFGHGWI*SFHCQRRHPNK Trigger: CTTGTTAGGGTGCCTCCTCTGGCAATGGAAACTGCATATCCACCCATGACCAAAAAGCAAATGATATATTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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| CDS CCA 72 bp | ATTACAGTAATATATCATTTGCTTTTTGGTCATGGGTaGATATGCAGTTTCCATTGCCAGAGGAGGCACCCT | + |
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Preference number: 6 (lower is better) Translates to: ITVIYHLLFGHG*ICSFHCQRRHP Trigger: AGGGTGCCTCCTCTGGCAATGGAAACTGCATATCCACCCATGACCAAAAAGCAAATGATATATTACTGTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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| CDS CAA 72 bp | ATATGGCTGCTGATTAAAAGTGTGGAACCAAGAGGCTaGGGCATGGACCTTCCTAATGTTAACTTCCTATTT | + |
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Preference number: 6 (lower is better) Translates to: IWLLIKSVEPRG*GMDLPNVNFLF Trigger: AAATAGGAAGTTAACATTAGGAAGGTCCATGCCCAAGCCTCTTGGTTCCACACTTTTAATCAGCAGCCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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| CDS CAA 90 bp | GCATTTCATCTGCAAGGCAGGGTTTTGATAGAGGGCCATAAAACATaGCATATAGGGCATTTCTTCCCATTTACCATGTTTCTTGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: AFHLQGRVLIEGHKT*HIGHFFPFTMFLAK Trigger: TTTTGCAAGAAACATGGTAAATGGGAAGAAATGCCCTATATGCAATGTTTTATGGCCCTCTATCAAAACCCTGCCTTGCAGATGAAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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| CDS CAA 90 bp | TTTGGCCAATTTACATATTCTGCATTTCATCTGCAAGGCAGGGTTTaGATAGAGGGCCATAAAACATTGCATATAGGGCATTTCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: FGQFTYSAFHLQGRV*IEGHKTLHIGHFFP Trigger: TGGGAAGAAATGCCCTATATGCAATGTTTTATGGCCCTCTATCAAAACCCTGCCTTGCAGATGAAATGCAGAATATGTAAATTGGCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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| CDS TCA 72 bp | CATCTCTTTACTATAGACCTTTCTTCTACTAGACTGTaGCTCTCCAGCTTCCCAGTAAAGACAAGAGAGTTA | + |
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Preference number: 6 (lower is better) Translates to: HLFTIDLSSTRL*LSSFPVKTREL Trigger: TAACTCTCTTGTCTTTACTGGGAAGCTGGAGAGTCACAGTCTAGTAGAAGAAAGGTCTATAGTAAAGAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573912.1 |
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| CDS CAA 72 bp | CTCTTTACTATAGACCTTAAAGGAGATGTCTACCAGTaGGAAAGGGGGAGTATGTGGATTTATTGCCACTTT | + |
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Preference number: 6 (lower is better) Translates to: LFTIDLKGDVYQ*ERGSMWIYCHF Trigger: AAAGTGGCAATAAATCCACATACTCCCCCTTTCCAACTGGTAGACATCTCCTTTAAGGTCTATAGTAAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000572088.1 ENST00000576084.5 |
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| CDS CAA 90 bp | ATGCCACATCTCTTTACTATAGACCTTAAAGGAGATGTCTACCAGTaGGAAAGGGGGAGTATGTGGATTTATTGCCACTTTTTAGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: MPHLFTIDLKGDVYQ*ERGSMWIYCHFLEF Trigger: AAACTCTAAAAAGTGGCAATAAATCCACATACTCCCCCTTTCCAACTGGTAGACATCTCCTTTAAGGTCTATAGTAAAGAGATGTGGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000572088.1 ENST00000576084.5 |
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| CDS CAA 72 bp | TTTACATATTCTGCATTTCATCTGCAAGGCAGGGTTTaGATAGAGGGCCATAAAACATTGCATATAGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: FTYSAFHLQGRV*IEGHKTLHIGH Trigger: ATGCCCTATATGCAATGTTTTATGGCCCTCTATCAAAACCCTGCCTTGCAGATGAAATGCAGAATATGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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| CDS CAA 72 bp | AGGGGAAGAAACCAAGTAACACTTGGTATTGCTAATTaGAGAACTTCTCAAACAGAATTAGAAGTATGGCTA | + |
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Preference number: 6 (lower is better) Translates to: RGRNQVTLGIAN*RTSQTELEVWL Trigger: TAGCCATACTTCTAATTCTGTTTGAGAAGTTCTCAAATTAGCAATACCAAGTGTTACTTGGTTTCTTCCCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572088.1 |
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