Pregenerated sensors for COTL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000103187Ensembl transcript IDs: ENST00000262428.5, ENST00000561707.1, ENST00000564057.1, ENST00000564662.1, ENST00000567278.1, ENST00000567786.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACTTATCCTCGCAACAGCACTGTGAGAGTGCAGGTGAGGAAACCAAGACCCCCATTTGAGAGGCCAAGGTaGGCAGATCACCTAAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: TYPRNSTVRVQVRKPRPPFERPR*ADHLRS Trigger: TGACCTTAGGTGATCTGCCCACCTTGGCCTCTCAAA...TGGGGGTCTTGGTTTCCTCACCTGCACTCTCACAGTGCTGTTGCGAGGATAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567786.2 |
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| 3UTR TCA 72 bp | AGATGGCAAAATAGGCCCGGGCTCTGGAAAGCAACGTaGGGTCATGCAGATCTCACTAGGCAGACCTCGTCG | + |
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Preference number: 3 (lower is better) Translates to: RWQNRPGLWKAT*GHADLTRQTSS Trigger: CGACGAGGTCTGCCTAGTGAGATCTGCATGACCTCACGTTGCTTTCCAGAGCCCGGGCCTATTTTGCCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262428.5 ENST00000564057.1 |
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| CDS-3UTR GCA 90 bp | TCGTTCCAAACCACACAGCCAGGAAGCAGCCGTTCAGGGATTCGAACCCACACCTGGTACTCCGCTCCCTaGTCGCCGGGGACGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: SFQTTQPGSSRSGIRTHTWYSAP*SPGTMV Trigger: CACCATCGTCCCCGGCGAGCAGGGAGCGGAGTACCA...GGTGTGGGTTCGAATCCCTGAACGGCTGCTTCCTGGCTGTGTGGTTTGGAACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567786.2 |
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| CDS-3UTR TCA 90 bp | CCAAACCACACAGCCAGGAAGCAGCCGTTCAGGGATTCGAACCCACACCGTCGGCTGTGCACTGCTGGATaGAGTGCTGGTACTCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: PNHTARKQPFRDSNPHRRLCTAG*SAGTPL Trigger: GAGCGGAGTACCAGCACTTCATCCAGCAGTGCACAG...CCGACGGTGTGGGTTCGAATCCCTGAACGGCTGCTTCCTGGCTGTGTGGTTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567786.2 |
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| CDS-3UTR TCA 90 bp | GCAGCCGTTCAGGGATTCGAACCCACACCGTCGGCCGGGCGCAGTGGCTCACGCGCATTTTATACATACTaGCTCACTTATCCTCGCAAC | + |
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Preference number: 4 (lower is better) Translates to: AAVQGFEPTPSAGRSGSRAFYTY*LTYPRN Trigger: GTTGCGAGGATAAGTGAGTCAGTATGTATAAAATGC...GCGTGAGCCACTGCGCCCGGCCGACGGTGTGGGTTCGAATCCCTGAACGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567786.2 |
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| CDS-3UTR TCA 90 bp | GAGATTAAGGAACTCGTTCCAAACCACACAGCCAGGAAGCAGCCGTTCAGGGATGGCAGGAGAATCTCTTaGACCCGGGAGACGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: EIKELVPNHTARKQPFRDGRRIS*TRETEV Trigger: AACCTCCGTCTCCCGGGTTCAAGAGATTCTCCTGCC...ATCCCTGAACGGCTGCTTCCTGGCTGTGTGGTTTGGAACGAGTTCCTTAATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567786.2 |
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| CDS-3UTR CCA 90 bp | CCTCGCAACAGCACTGTGAGAGTGCAGGTGAGGAAACCAAGACCCCCAGAGATTTTTGAGAGGCCAAGGTaGGCAGATCACCTAAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PRNSTVRVQVRKPRPPEIFERPR*ADHLRS Trigger: TGACCTTAGGTGATCTGCCCACCTTGGCCTCTCAAA...AATCTCTGGGGGTCTTGGTTTCCTCACCTGCACTCTCACAGTGCTGTTGCGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000567786.2 |
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| CDS-3UTR GCA 90 bp | TTTCGCAAACAATCATGTAGCTTGTACAGGCACTGTTCTGAGCATTTTATACATCACTGCTGGATGAAGTaGTGGTACTCCGCTCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: FRKQSCSLYRHCSEHFIHHCWMK*WYSAPC Trigger: GCAGGGAGCGGAGTACCAGCACTTCATCCAGCAGTG...ATGTATAAAATGCTCAGAACAGTGCCTGTACAAGCTACATGATTGTTTGCGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567786.2 |
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| CDS CCA 90 bp | AATAAGGCGAGGAAGACAGCGCGGGAGGCCCGAATCCGTCCCGCCTaGAGGCCGGCTCGGTGCACGAGGCCCCGCGCGAGCCCGGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: NKARKTAREARIRPA*RPARCTRPRASPGS Trigger: GCTCCCCGGGCTCGCGCGGGGCCTCGTGCACCGAGCCGGCCTCCAGGCGGGACGGATTCGGGCCTCCCGCGCTGTCTTCCTCGCCTTATT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564662.1 |
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| CDS CCA 90 bp | CCCATGTCATGTCCCTGGGGAGAGGCTGTGAGCCACGAGTGCGCCTaGAGCAGCACAGCAGGAGACCGGTGCAGTTCCCTGGGAGCACCA | + |
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Preference number: 5 (lower is better) Translates to: PMSCPWGEAVSHECA*SSTAGDRCSSLGAP Trigger: TGGTGCTCCCAGGGAACTGCACCGGTCTCCTGCTGTGCTGCTCCAGGCGCACTCGTGGCTCACAGCCTCTCCCCAGGGACATGACATGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561707.1 |
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| CDS GCA 90 bp | GCTGTGAGCCACGAGTGCGCCTGGAGCAGCACAGCAGGAGACCGGTaGAGTTCCCTGGGAGCACCATGTGCAGAGGACAGGAGGGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: AVSHECAWSSTAGDR*SSLGAPCAEDRREA Trigger: TGCTTCCCTCCTGTCCTCTGCACATGGTGCTCCCAGGGAACTGCACCGGTCTCCTGCTGTGCTGCTCCAGGCGCACTCGTGGCTCACAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561707.1 |
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| CDS GCA 90 bp | AAACACACACACACATCAGCGCTGGTGGCCGCGCGACGCGGCGCTTaGAGAGGACAATCTAACAGACGCGCTGGCCACGGAGAAGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: KHTHTSALVAARRGA*RGQSNRRAGHGEAR Trigger: GCGGGCTTCTCCGTGGCCAGCGCGTCTGTTAGATTGTCCTCTGCAAGCGCCGCGTCGCGCGGCCACCAGCGCTGATGTGTGTGTGTGTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564662.1 |
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| CDS CCA 90 bp | ACGAGTGCGCCTGGAGCAGCACAGCAGGAGACCGGTGCAGTTCCCTaGGAGCACCATGTGCAGAGGACAGGAGGGAAGCACTCATCCGCT | + |
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Preference number: 5 (lower is better) Translates to: TSAPGAAQQETGAVP*EHHVQRTGGKHSSA Trigger: AGCGGATGAGTGCTTCCCTCCTGTCCTCTGCACATGGTGCTCCCAGGGAACTGCACCGGTCTCCTGCTGTGCTGCTCCAGGCGCACTCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561707.1 |
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| CDS GCA 90 bp | ACGACCTCCTTCACCAGGGTCTTGTCCGTCCCGGTTTTGGCGCGCTaGAGCCCGCTGACGTTCTCACCGATCCACGTGATGAGGGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: TTSFTRVLSVPVLAR*SPLTFSPIHVMRAN Trigger: GTTTGCCCTCATCACGTGGATCGGTGAGAACGTCAGCGGGCTGCAGCGCGCCAAAACCGGGACGGACAAGACCCTGGTGAAGGAGGTCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000262428.5 ENST00000561707.1 ENST00000564057.1 |
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| CDS GCA 90 bp | GAGCAGCACAGCAGGAGACCGGTGCAGTTCCCTGGGAGCACCATGTaGAGAGGACAGGAGGGAAGCACTCATCCGCTGCCCTTGTCACAC | + |
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Preference number: 5 (lower is better) Translates to: EQHSRRPVQFPGSTM*RGQEGSTHPLPLSH Trigger: GTGTGACAAGGGCAGCGGATGAGTGCTTCCCTCCTGTCCTCTGCACATGGTGCTCCCAGGGAACTGCACCGGTCTCCTGCTGTGCTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561707.1 |
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| CDS CCA 90 bp | CCAGGCCAAATACAAACAGGCACCCTTGTCCACAGGCATCTCCAGTaGCCTGAGCCTCCCTGGGGACTCAACCTCCCTGAGCCTGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: PGQIQTGTLVHRHLQ*PEPPWGLNLPEPES Trigger: AGACTCAGGCTCAGGGAGGTTGAGTCCCCAGGGAGGCTCAGGCCACTGGAGATGCCTGTGGACAAGGGTGCCTGTTTGTATTTGGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS TCA 90 bp | CGGAAGGCAGTATTTAATGGCTCTGGGCCCTGGTTTCCACCTCTGTaGAAGAAGAAGGCTGGACAACAGGGTCCCCCAGCCTTTCCCCAC | + |
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Preference number: 5 (lower is better) Translates to: RKAVFNGSGPWFPPL*KKKAGQQGPPAFPH Trigger: GTGGGGAAAGGCTGGGGGACCCTGTTGTCCAGCCTTCTTCTTTCACAGAGGTGGAAACCAGGGCCCAGAGCCATTAAATACTGCCTTCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 90 bp | CTGATGCTGCGTCTTCCCATGTCCGTGGGGATGGCCCGAGGAAGCTaGGGCTTGAATTTGGGCTGTTACCTTGGCCAAGTCCCTTCAATT | + |
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Preference number: 5 (lower is better) Translates to: LMLRLPMSVGMARGS*GLNLGCYLGQVPSI Trigger: AATTGAAGGGACTTGGCCAAGGTAACAGCCCAAATTCAAGCCCCAGCTTCCTCGGGCCATCCCCACGGACATGGGAAGACGCAGCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS GCA 90 bp | AGTCAGCTTTGGGATCAGAGCATAGCTCTCACAATGAAGGCTGCCTaGTGGCTTCAGGTCCTTCCCAAACCCTCACAACACGGTGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: SQLWDQSIALTMKAA*WLQVLPKPSQHGVG Trigger: CCCCACACCGTGTTGTGAGGGTTTGGGAAGGACCTGAAGCCAGCAGGCAGCCTTCATTGTGAGAGCTATGCTCTGATCCCAAAGCTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS GCA 90 bp | GGGGCTACAGGGCTCAGCAAAATGGATGCAGTCAGTCTTTCCTCTTaGAGTACACAGGTTTCACCCATAGAACCCGCAGGCACCCATGAT | + |
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Preference number: 5 (lower is better) Translates to: GATGLSKMDAVSLSS*STQVSPIEPAGTHD Trigger: ATCATGGGTGCCTGCGGGTTCTATGGGTGAAACCTGTGTACTGCAAGAGGAAAGACTGACTGCATCCATTTTGCTGAGCCCTGTAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 90 bp | AGGGTAGAGGCTCTGCCTTCTTTCAACAAATACCACGCCAGGCTGTaGGGCTACAGGGCTCAGCAAAATGGATGCAGTCAGTCTTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: RVEALPSFNKYHARL*GYRAQQNGCSQSFL Trigger: GAGGAAAGACTGACTGCATCCATTTTGCTGAGCCCTGTAGCCCCACAGCCTGGCGTGGTATTTGTTGAAAGAAGGCAGAGCCTCTACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS GCA 90 bp | GAAAAGTCAGCTTTGGGATCAGAGCATAGCTCTCACAATGAAGGCTaGCTGCTGGCTTCAGGTCCTTCCCAAACCCTCACAACACGGTGT | + |
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Preference number: 5 (lower is better) Translates to: EKSALGSEHSSHNEG*LLASGPSQTLTTRC Trigger: ACACCGTGTTGTGAGGGTTTGGGAAGGACCTGAAGCCAGCAGGCAGCCTTCATTGTGAGAGCTATGCTCTGATCCCAAAGCTGACTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 90 bp | CAGATCCTAGGGCAATGGGGAAACCTGGCATGGAAAAGTCAGCTTTaGGATCAGAGCATAGCTCTCACAATGAAGGCTGCCTGCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: QILGQWGNLAWKSQL*DQSIALTMKAACWL Trigger: AAGCCAGCAGGCAGCCTTCATTGTGAGAGCTATGCTCTGATCCCAAAGCTGACTTTTCCATGCCAGGTTTCCCCATTGCCCTAGGATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 90 bp | CAACAAATACCACGCCAGGCTGTGGGGCTACAGGGCTCAGCAAAATaGATGCAGTCAGTCTTTCCTCTTGCAGTACACAGGTTTCACCCA | + |
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Preference number: 5 (lower is better) Translates to: QQIPRQAVGLQGSAK*MQSVFPLAVHRFHP Trigger: TGGGTGAAACCTGTGTACTGCAAGAGGAAAGACTGACTGCATCCATTTTGCTGAGCCCTGTAGCCCCACAGCCTGGCGTGGTATTTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS GCA 90 bp | GAGGCCTGTCGGGGTACAAGTGTAAGGTCTGCTATTCAGGAGTGTTaGGCCTATGAGGATATTCCTAACCAATGCAGAGAATGTGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: EACRGTSVRSAIQEC*AYEDIPNQCRECGC Trigger: GCACCCACATTCTCTGCATTGGTTAGGAATATCCTCATAGGCGCAACACTCCTGAATAGCAGACCTTACACTTGTACCCCGACAGGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 90 bp | TTCCACCAGGGACACCAGATCCTAGGGCAATGGGGAAACCTGGCATaGAAAAGTCAGCTTTGGGATCAGAGCATAGCTCTCACAATGAAG | + |
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Preference number: 5 (lower is better) Translates to: FHQGHQILGQWGNLA*KSQLWDQSIALTMK Trigger: CTTCATTGTGAGAGCTATGCTCTGATCCCAAAGCTGACTTTTCCATGCCAGGTTTCCCCATTGCCCTAGGATCTGGTGTCCCTGGTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS TCA 90 bp | GAATTCCTTGGAATAACCAAGTCAGTGAAACTGGCAGACAGAAGATaGCAAATCCGGCTGCAAACCCCAAAGCCAGGCCCAGGGTTAGCT | + |
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Preference number: 5 (lower is better) Translates to: EFLGITKSVKLADRR*QIRLQTPKPGPGLA Trigger: AGCTAACCCTGGGCCTGGCTTTGGGGTTTGCAGCCGGATTTGTCATCTTCTGTCTGCCAGTTTCACTGACTTGGTTATTCCAAGGAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS GCA 90 bp | AAAGGGGCTTGCACACTTGATGAGAACACCTGGTACAAAGCGGAGTaGTCAACAGTCAGAGAGAATGTTCTACAGGACTGTGGGTTCACC | + |
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Preference number: 5 (lower is better) Translates to: KGACTLDENTWYKAE*STVRENVLQDCGFT Trigger: GGTGAACCCACAGTCCTGTAGAACATTCTCTCTGACTGTTGAGCACTCCGCTTTGTACCAGGTGTTCTCATCAAGTGTGCAAGCCCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 90 bp | CATCAACAGAGGAGTGGATTATCAAAACACGGTCCGTCCACACAATaGAATATTCCTCAGCCACAGAGAGGAATGAAGCGCTGCCACACG | + |
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Preference number: 5 (lower is better) Translates to: HQQRSGLSKHGPSTQ*NIPQPQRGMKRCHT Trigger: CGTGTGGCAGCGCTTCATTCCTCTCTGTGGCTGAGGAATATTCCATTGTGTGGACGGACCGTGTTTTGATAATCCACTCCTCTGTTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 90 bp | GGTCGTATGAGCATAAAAGGGGCTTGCACACTTGATGAGAACACCTaGTACAAAGCGGAGTGCTCAACAGTCAGAGAGAATGTTCTACAG | + |
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Preference number: 5 (lower is better) Translates to: GRMSIKGACTLDENT*YKAECSTVRENVLQ Trigger: CTGTAGAACATTCTCTCTGACTGTTGAGCACTCCGCTTTGTACCAGGTGTTCTCATCAAGTGTGCAAGCCCCTTTTATGCTCATACGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS-3UTR CAA 90 bp | AATCATGTAGCTTGTACAGGCACTGTTCTGAGCATTTTATACATACTGACTCACAGGCAGGAGAATCTCTaGAACCCGGGAGACGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: NHVACTGTVLSILYILTHRQENL*NPGDGG Trigger: ACCTCCGTCTCCCGGGTTCAAGAGATTCTCCTGCCT...GTGAGTCAGTATGTATAAAATGCTCAGAACAGTGCCTGTACAAGCTACATGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567786.2 |
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| CDS CCA 90 bp | AGTGCCACAGTACTGAGAATGACACACAGTAGTAAATATGAATCATaGAAGGTGGAAGCAACCCCTATGTCCATCAACAGAGGAGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: SATVLRMTHSSKYES*KVEATPMSINRGVD Trigger: ATCCACTCCTCTGTTGATGGACATAGGGGTTGCTTCCACCTTCCATGATTCATATTTACTACTGTGTGTCATTCTCAGTACTGTGGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 90 bp | CACATTAATAAACACCTGTCATATGCCATACACTCTCCTAGGCTCTaGGAAGTCAAAATTCTGGTACTTACTGGTCTCTCTGACAGACTG | + |
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Preference number: 5 (lower is better) Translates to: HINKHLSYAIHSPRL*EVKILVLTGLSDRL Trigger: CAGTCTGTCAGAGAGACCAGTAAGTACCAGAATTTTGACTTCCCAGAGCCTAGGAGAGTGTATGGCATATGACAGGTGTTTATTAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS-3UTR CAA 90 bp | ACTTTTTATTTATTTCGCAAACAATCATGTAGCTTGTACAGGCACTGTTCTGAGCCCGGGAGACGGAGGTaGCAGTTAGCTGAGATTGTA | + |
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Preference number: 5 (lower is better) Translates to: TFYLFRKQSCSLYRHCSEPGRRR*QLAEIV Trigger: TACAATCTCAGCTAACTGCAACCTCCGTCTCCCGGG...CTCAGAACAGTGCCTGTACAAGCTACATGATTGTTTGCGAAATAAATAAAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567786.2 |
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| CDS TCA 90 bp | GTGGGGCCCAGGAGAGGAACTGATCTTCATTGTATTGAAAGACAATaGAAGCGACACAATTTGTTCTTCCCACGAACACACATTAATAAA | + |
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Preference number: 5 (lower is better) Translates to: VGPRRGTDLHCIERQ*KRHNLFFPRTHINK Trigger: TTTATTAATGTGTGTTCGTGGGAAGAACAAATTGTGTCGCTTTCATTGTCTTTCAATACAATGAAGATCAGTTCCTCTCCTGGGCCCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 72 bp | AGGAAGACAGCGCGGGAGGCCCGAATCCGTCCCGCCTaGAGGCCGGCTCGGTGCACGAGGCCCCGCGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: RKTAREARIRPA*RPARCTRPRAS Trigger: GCTCGCGCGGGGCCTCGTGCACCGAGCCGGCCTCCAGGCGGGACGGATTCGGGCCTCCCGCGCTGTCTTCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564662.1 |
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| CDS GCA 72 bp | CACACATCAGCGCTGGTGGCCGCGCGACGCGGCGCTTaGAGAGGACAATCTAACAGACGCGCTGGCCACGGA | + |
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Preference number: 6 (lower is better) Translates to: HTSALVAARRGA*RGQSNRRAGHG Trigger: TCCGTGGCCAGCGCGTCTGTTAGATTGTCCTCTGCAAGCGCCGCGTCGCGCGGCCACCAGCGCTGATGTGTG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564662.1 |
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| CDS CCA 72 bp | TGTCCCTGGGGAGAGGCTGTGAGCCACGAGTGCGCCTaGAGCAGCACAGCAGGAGACCGGTGCAGTTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: CPWGEAVSHECA*SSTAGDRCSSL Trigger: CAGGGAACTGCACCGGTCTCCTGCTGTGCTGCTCCAGGCGCACTCGTGGCTCACAGCCTCTCCCCAGGGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561707.1 |
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| CDS GCA 72 bp | CACGAGTGCGCCTGGAGCAGCACAGCAGGAGACCGGTaGAGTTCCCTGGGAGCACCATGTGCAGAGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: HECAWSSTAGDR*SSLGAPCAEDR Trigger: CCTGTCCTCTGCACATGGTGCTCCCAGGGAACTGCACCGGTCTCCTGCTGTGCTGCTCCAGGCGCACTCGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561707.1 |
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| CDS GCA 72 bp | AGCAGGAGACCGGTGCAGTTCCCTGGGAGCACCATGTaGAGAGGACAGGAGGGAAGCACTCATCCGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SRRPVQFPGSTM*RGQEGSTHPLP Trigger: GGGCAGCGGATGAGTGCTTCCCTCCTGTCCTCTGCACATGGTGCTCCCAGGGAACTGCACCGGTCTCCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561707.1 |
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| CDS CAA 72 bp | ACGACCTCCTTCACCAGGGTCTTGTCCGTCCCGGTTTaGGCGCGCTGCAGCCCGCTGACGTTCTCACCGATC | + |
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Preference number: 6 (lower is better) Translates to: TTSFTRVLSVPV*ARCSPLTFSPI Trigger: GATCGGTGAGAACGTCAGCGGGCTGCAGCGCGCCAAAACCGGGACGGACAAGACCCTGGTGAAGGAGGTCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000262428.5 ENST00000561707.1 ENST00000564057.1 |
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| CDS GCA 72 bp | TTCACCAGGGTCTTGTCCGTCCCGGTTTTGGCGCGCTaGAGCCCGCTGACGTTCTCACCGATCCACGTGATG | + |
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Preference number: 6 (lower is better) Translates to: FTRVLSVPVLAR*SPLTFSPIHVM Trigger: CATCACGTGGATCGGTGAGAACGTCAGCGGGCTGCAGCGCGCCAAAACCGGGACGGACAAGACCCTGGTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000262428.5 ENST00000561707.1 ENST00000564057.1 |
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| CDS CAA 90 bp | TGCAGCCCGCTGACGTTCTCACCGATCCACGTGATGAGGGCAAACTaGGACCTCTTGCTCATGGCATCCCCGGTGGTGAAGCGCACGAAG | + |
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Preference number: 6 (lower is better) Translates to: CSPLTFSPIHVMRAN*DLLLMASPVVKRTK Trigger: CTTCGTGCGCTTCACCACCGGGGATGCCATGAGCAAGAGGTCCAAGTTTGCCCTCATCACGTGGATCGGTGAGAACGTCAGCGGGCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000262428.5 ENST00000561707.1 ENST00000564057.1 ENST00000564662.1 |
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| CDS CCA 72 bp | TGGGCCCTGGTTTCCACCTCTGTGAAAGAAGAAGGCTaGACAACAGGGTCCCCCAGCCTTTCCCCACCAGTC | + |
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Preference number: 6 (lower is better) Translates to: WALVSTSVKEEG*TTGSPSLSPPV Trigger: GACTGGTGGGGAAAGGCTGGGGGACCCTGTTGTCCAGCCTTCTTCTTTCACAGAGGTGGAAACCAGGGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 72 bp | CGTCTTCCCATGTCCGTGGGGATGGCCCGAGGAAGCTaGGGCTTGAATTTGGGCTGTTACCTTGGCCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: RLPMSVGMARGS*GLNLGCYLGQV Trigger: GACTTGGCCAAGGTAACAGCCCAAATTCAAGCCCCAGCTTCCTCGGGCCATCCCCACGGACATGGGAAGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CAA 72 bp | TGCAGAGGACAGGAGGGAAGCACTCATCCGCTGCCCTaGTCACACTCCCCTGAATCCTGGCAACAGTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CRGQEGSTHPLP*SHSPESWQQCC Trigger: GCAGCACTGTTGCCAGGATTCAGGGGAGTGTGACAAGGGCAGCGGATGAGTGCTTCCCTCCTGTCCTCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561707.1 |
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| CDS CAA 72 bp | CCCATGTCCGTGGGGATGGCCCGAGGAAGCTGGGGCTaGAATTTGGGCTGTTACCTTGGCCAAGTCCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PMSVGMARGSWG*NLGCYLGQVPS Trigger: TGAAGGGACTTGGCCAAGGTAACAGCCCAAATTCAAGCCCCAGCTTCCTCGGGCCATCCCCACGGACATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CAA 72 bp | TCACCGATCCACGTGATGAGGGCAAACTTGGACCTCTaGCTCATGGCATCCCCGGTGGTGAAGCGCACGAAG | + |
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Preference number: 6 (lower is better) Translates to: SPIHVMRANLDL*LMASPVVKRTK Trigger: CTTCGTGCGCTTCACCACCGGGGATGCCATGAGCAAGAGGTCCAAGTTTGCCCTCATCACGTGGATCGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000262428.5 ENST00000561707.1 ENST00000564057.1 ENST00000564662.1 |
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| CDS CAA 90 bp | CTGCGTCTTCCCATGTCCGTGGGGATGGCCCGAGGAAGCTGGGGCTaGAATTTGGGCTGTTACCTTGGCCAAGTCCCTTCAATTCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LRLPMSVGMARGSWG*NLGCYLGQVPSILC Trigger: ACAGAGAATTGAAGGGACTTGGCCAAGGTAACAGCCCAAATTCAAGCCCCAGCTTCCTCGGGCCATCCCCACGGACATGGGAAGACGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 72 bp | CCACGCCAGGCTGTGGGGCTACAGGGCTCAGCAAAATaGATGCAGTCAGTCTTTCCTCTTGCAGTACACAGG | + |
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Preference number: 6 (lower is better) Translates to: PRQAVGLQGSAK*MQSVFPLAVHR Trigger: CCTGTGTACTGCAAGAGGAAAGACTGACTGCATCCATTTTGCTGAGCCCTGTAGCCCCACAGCCTGGCGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 72 bp | TCACCATACGTGGAGGTGGAAGGAGACAGGCGTAATTaGCTCTCGCCAGCTGGGACAAGCAAGCTTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SPYVEVEGDRRN*LSPAGTSKLQP Trigger: TGGCTGAAGCTTGCTTGTCCCAGCTGGCGAGAGCCAATTACGCCTGTCTCCTTCCACCTCCACGTATGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CAA 72 bp | CTGACGTTCTCACCGATCCACGTGATGAGGGCAAACTaGGACCTCTTGCTCATGGCATCCCCGGTGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LTFSPIHVMRAN*DLLLMASPVVK Trigger: CTTCACCACCGGGGATGCCATGAGCAAGAGGTCCAAGTTTGCCCTCATCACGTGGATCGGTGAGAACGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000262428.5 ENST00000561707.1 ENST00000564057.1 ENST00000564662.1 |
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| CDS GCA 72 bp | CAGGAGTGTTGCGCCTATGAGGATATTCCTAACCAATaGAGAGAATGTGGGTGCAGGGGAAGCTCCGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: QECCAYEDIPNQ*RECGCRGSSGE Trigger: CTCCCCGGAGCTTCCCCTGCACCCACATTCTCTGCATTGGTTAGGAATATCCTCATAGGCGCAACACTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS GCA 72 bp | TGGGATCAGAGCATAGCTCTCACAATGAAGGCTGCCTaGTGGCTTCAGGTCCTTCCCAAACCCTCACAACAC | + |
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Preference number: 6 (lower is better) Translates to: WDQSIALTMKAA*WLQVLPKPSQH Trigger: GTGTTGTGAGGGTTTGGGAAGGACCTGAAGCCAGCAGGCAGCCTTCATTGTGAGAGCTATGCTCTGATCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS GCA 72 bp | GCTTTGGGATCAGAGCATAGCTCTCACAATGAAGGCTaGCTGCTGGCTTCAGGTCCTTCCCAAACCCTCACA | + |
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Preference number: 6 (lower is better) Translates to: ALGSEHSSHNEG*LLASGPSQTLT Trigger: TGTGAGGGTTTGGGAAGGACCTGAAGCCAGCAGGCAGCCTTCATTGTGAGAGCTATGCTCTGATCCCAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 72 bp | GCTCTGCCTTCTTTCAACAAATACCACGCCAGGCTGTaGGGCTACAGGGCTCAGCAAAATGGATGCAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: ALPSFNKYHARL*GYRAQQNGCSQ Trigger: CTGACTGCATCCATTTTGCTGAGCCCTGTAGCCCCACAGCCTGGCGTGGTATTTGTTGAAAGAAGGCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CAA 90 bp | CCAGATCCTAGGGCAATGGGGAAACCTGGCATGGAAAAGTCAGCTTaGGGATCAGAGCATAGCTCTCACAATGAAGGCTGCCTGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PDPRAMGKPGMEKSA*GSEHSSHNEGCLLA Trigger: AGCCAGCAGGCAGCCTTCATTGTGAGAGCTATGCTCTGATCCCAAAGCTGACTTTTCCATGCCAGGTTTCCCCATTGCCCTAGGATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS TCA 72 bp | AATAGTCCCCCAGTGGCTGACGTCAAGCTATCAAAGTaGTGTCACCATACGTGGAGGTGGAAGGAGACAGGC | + |
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Preference number: 6 (lower is better) Translates to: NSPPVADVKLSK*CHHTWRWKETG Trigger: GCCTGTCTCCTTCCACCTCCACGTATGGTGACATCACTTTGATAGCTTGACGTCAGCCACTGGGGGACTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS GCA 72 bp | GGGCTCAGCAAAATGGATGCAGTCAGTCTTTCCTCTTaGAGTACACAGGTTTCACCCATAGAACCCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: GLSKMDAVSLSS*STQVSPIEPAG Trigger: GCCTGCGGGTTCTATGGGTGAAACCTGTGTACTGCAAGAGGAAAGACTGACTGCATCCATTTTGCTGAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 72 bp | GGGCAATGGGGAAACCTGGCATGGAAAAGTCAGCTTTaGGATCAGAGCATAGCTCTCACAATGAAGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GQWGNLAWKSQL*DQSIALTMKAA Trigger: GGCAGCCTTCATTGTGAGAGCTATGCTCTGATCCCAAAGCTGACTTTTCCATGCCAGGTTTCCCCATTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS TCA 72 bp | GGAATAACCAAGTCAGTGAAACTGGCAGACAGAAGATaGCAAATCCGGCTGCAAACCCCAAAGCCAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: GITKSVKLADRR*QIRLQTPKPGP Trigger: TGGGCCTGGCTTTGGGGTTTGCAGCCGGATTTGTCATCTTCTGTCTGCCAGTTTCACTGACTTGGTTATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 72 bp | CCGAGGAAGCTGGGGCTTGAATTTGGGCTGTTACCTTaGCCAAGTCCCTTCAATTCTCTGTGCCTCAACTTT | + |
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Preference number: 6 (lower is better) Translates to: PRKLGLEFGLLP*PSPFNSLCLNF Trigger: AAAGTTGAGGCACAGAGAATTGAAGGGACTTGGCCAAGGTAACAGCCCAAATTCAAGCCCCAGCTTCCTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CAA 72 bp | AGGGCTCAGCAAAATGGATGCAGTCAGTCTTTCCTCTaGCAGTACACAGGTTTCACCCATAGAACCCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RAQQNGCSQSFL*QYTGFTHRTRR Trigger: CCTGCGGGTTCTATGGGTGAAACCTGTGTACTGCAAGAGGAAAGACTGACTGCATCCATTTTGCTGAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS TCA 72 bp | CCACACAATGGAATATTCCTCAGCCACAGAGAGGAATaGAGCGCTGCCACACGCAACTACATGGATGAACCT | + |
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Preference number: 6 (lower is better) Translates to: PHNGIFLSHREE*SAATRNYMDEP Trigger: AGGTTCATCCATGTAGTTGCGTGTGGCAGCGCTTCATTCCTCTCTGTGGCTGAGGAATATTCCATTGTGTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 72 bp | ACAGAGAGGAATGAAGCGCTGCCACACGCAACTACATaGATGAACCTCGGAAACAGGATGCTGAGTGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: TERNEALPHATT*MNLGNRMLSER Trigger: TCTTTCACTCAGCATCCTGTTTCCGAGGTTCATCCATGTAGTTGCGTGTGGCAGCGCTTCATTCCTCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 72 bp | AGGAGTGGATTATCAAAACACGGTCCGTCCACACAATaGAATATTCCTCAGCCACAGAGAGGAATGAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: RSGLSKHGPSTQ*NIPQPQRGMKR Trigger: GCGCTTCATTCCTCTCTGTGGCTGAGGAATATTCCATTGTGTGGACGGACCGTGTTTTGATAATCCACTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS TCA 72 bp | CTCGGAAACAGGATGCTGAGTGAAAGAAGCCAGGCATaGAGACCATGTACTGTCAGCTGCCATTGGTATAAA | + |
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Preference number: 6 (lower is better) Translates to: LGNRMLSERSQA*RPCTVSCHWYK Trigger: TTTATACCAATGGCAGCTGACAGTACATGGTCTTCATGCCTGGCTTCTTTCACTCAGCATCCTGTTTCCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS GCA 72 bp | CGGGGTACAAGTGTAAGGTCTGCTATTCAGGAGTGTTaGGCCTATGAGGATATTCCTAACCAATGCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: RGTSVRSAIQEC*AYEDIPNQCRE Trigger: TTCTCTGCATTGGTTAGGAATATCCTCATAGGCGCAACACTCCTGAATAGCAGACCTTACACTTGTACCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS GCA 72 bp | TGCACACTTGATGAGAACACCTGGTACAAAGCGGAGTaGTCAACAGTCAGAGAGAATGTTCTACAGGACTGT | + |
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Preference number: 6 (lower is better) Translates to: CTLDENTWYKAE*STVRENVLQDC Trigger: ACAGTCCTGTAGAACATTCTCTCTGACTGTTGAGCACTCCGCTTTGTACCAGGTGTTCTCATCAAGTGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 72 bp | AGCATAAAAGGGGCTTGCACACTTGATGAGAACACCTaGTACAAAGCGGAGTGCTCAACAGTCAGAGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: SIKGACTLDENT*YKAECSTVREN Trigger: ATTCTCTCTGACTGTTGAGCACTCCGCTTTGTACCAGGTGTTCTCATCAAGTGTGCAAGCCCCTTTTATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS TCA 72 bp | GTGATGATGACCAATAAACCAAAGACTCTGAACTGCTaGAGAAATACAGCCACAGTCCCCAGCACCCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: VMMTNKPKTLNC*RNTATVPSTLN Trigger: ATTCAGGGTGCTGGGGACTGTGGCTGTATTTCTTCAGCAGTTCAGAGTCTTTGGTTTATTGGTCATCATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS TCA 72 bp | GGGCTTGCACAACACTGTGAATGTTCTGAAAGCCACTaGATTGTACACTTTAAAATGGTTCAGGCCAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: GLAQHCECSESH*IVHFKMVQARC Trigger: GCACCTGGCCTGAACCATTTTAAAGTGTACAATTCAGTGGCTTTCAGAACATTCACAGTGTTGTGCAAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS TCA 72 bp | CTGGGAAGTCAAAATTCTGGTACTTACTGGTCTCTCTaGCAGACTGAGAATAGAAAAATAGAAGCAGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: LGSQNSGTYWSL*QTENRKIEAAG Trigger: GCCCGCTGCTTCTATTTTTCTATTCTCAGTCTGTCAGAGAGACCAGTAAGTACCAGAATTTTGACTTCCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS CCA 72 bp | GTACTGAGAATGACACACAGTAGTAAATATGAATCATaGAAGGTGGAAGCAACCCCTATGTCCATCAACAGA | + |
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Preference number: 6 (lower is better) Translates to: VLRMTHSSKYES*KVEATPMSINR Trigger: TCTGTTGATGGACATAGGGGTTGCTTCCACCTTCCATGATTCATATTTACTACTGTGTGTCATTCTCAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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| CDS TCA 72 bp | AGGAGAGGAACTGATCTTCATTGTATTGAAAGACAATaGAAGCGACACAATTTGTTCTTCCCACGAACACAC | + |
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Preference number: 6 (lower is better) Translates to: RRGTDLHCIERQ*KRHNLFFPRTH Trigger: GTGTGTTCGTGGGAAGAACAAATTGTGTCGCTTTCATTGTCTTTCAATACAATGAAGATCAGTTCCTCTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567278.1 |
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