Pregenerated sensors for COSMOC (Homo sapiens)
Ensembl gene IDs: ENSG00000260552Ensembl transcript IDs: ENST00000568654.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCTGGAAACATCTTCGTGGGACCCATCGAGAGGTTGTTTAAAGACTaGCACCCGCTCCCGCGCCCAGGTGGGGAAAGGGCTGGCCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: SGNIFVGPIERLFKD*HPLPRPGGERAGQK Trigger: CTTCTGGCCAGCCCTTTCCCCACCTGGGCGCGGGAGCGGGTGCCAGTCTTTAAACAACCTCTCGATGGGTCCCACGAAGATGTTTCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS TCA 90 bp | GGTCAAGGACCCAGGCTCTTATTTCGCTGTCTGACGTCCTTAGTATaGGGCTTTCACCTTCCAGGATGGCTGCTTGGCCTCCTGCCATGG | + |
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Preference number: 5 (lower is better) Translates to: GQGPRLLFRCLTSLV*GFHLPGWLLGLLPW Trigger: CCATGGCAGGAGGCCAAGCAGCCATCCTGGAAGGTGAAAGCCTCATACTAAGGACGTCAGACAGCGAAATAAGAGCCTGGGTCCTTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CCA 90 bp | TCTGACGTCCTTAGTATGAGGCTTTCACCTTCCAGGATGGCTGCTTaGCCTCCTGCCATGGTCTTTGCGTTCCAGCCAGCAAAGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: SDVLSMRLSPSRMAA*PPAMVFAFQPAKRK Trigger: CTTCCTCTTTGCTGGCTGGAACGCAAAGACCATGGCAGGAGGCCAAGCAGCCATCCTGGAAGGTGAAAGCCTCATACTAAGGACGTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CCA 90 bp | GAAATTAAATCTTTATTGCAGATGCCCATGTGCTCAGCAGAGAACTaGGGTGCTTCATTCTCGTTGCTTCTTCCACCGGCCTCTCCGCGA | + |
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Preference number: 5 (lower is better) Translates to: EIKSLLQMPMCSAEN*GASFSLLLPPASPR Trigger: TCGCGGAGAGGCCGGTGGAAGAAGCAACGAGAATGAAGCACCCCAGTTCTCTGCTGAGCACATGGGCATCTGCAATAAAGATTTAATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS GCA 90 bp | TACCGAGCTTCAGGAGAAGCTGGGAAATTAAATCTTTATTGCAGATaGCCATGTGCTCAGCAGAGAACTGGGGTGCTTCATTCTCGTTGC | + |
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Preference number: 5 (lower is better) Translates to: YRASGEAGKLNLYCR*PCAQQRTGVLHSRC Trigger: GCAACGAGAATGAAGCACCCCAGTTCTCTGCTGAGCACATGGGCATCTGCAATAAAGATTTAATTTCCCAGCTTCTCCTGAAGCTCGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS GCA 90 bp | TGGCCATACCGAGCTTCAGGAGAAGCTGGGAAATTAAATCTTTATTaGAGATGCCCATGTGCTCAGCAGAGAACTGGGGTGCTTCATTCT | + |
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Preference number: 5 (lower is better) Translates to: WPYRASGEAGKLNLY*RCPCAQQRTGVLHS Trigger: AGAATGAAGCACCCCAGTTCTCTGCTGAGCACATGGGCATCTGCAATAAAGATTTAATTTCCCAGCTTCTCCTGAAGCTCGGTATGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CCA 90 bp | CGGGCAGAATTTAGTGTTGTGGCCATACCGAGCTTCAGGAGAAGCTaGGAAATTAAATCTTTATTGCAGATGCCCATGTGCTCAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: RAEFSVVAIPSFRRS*EIKSLLQMPMCSAE Trigger: CTCTGCTGAGCACATGGGCATCTGCAATAAAGATTTAATTTCCCAGCTTCTCCTGAAGCTCGGTATGGCCACAACACTAAATTCTGCCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CCA 90 bp | GTTTATTTCTCTCATATGAAAGGAGTCAAGGCAGACAGACCAGGATaGGGAGGGAGATGTCTACAGGGTCAAGGACCCAGGCTCTTATTT | + |
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Preference number: 5 (lower is better) Translates to: VYFSHMKGVKADRPG*GGRCLQGQGPRLLF Trigger: AAATAAGAGCCTGGGTCCTTGACCCTGTAGACATCTCCCTCCCCATCCTGGTCTGTCTGCCTTGACTCCTTTCATATGAGAGAAATAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CCA 90 bp | TCCCATACTATTTTGCTTAATCTCCTCGGGCAGAATTTAGTGTTGTaGCCATACCGAGCTTCAGGAGAAGCTGGGAAATTAAATCTTTAT | + |
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Preference number: 5 (lower is better) Translates to: SHTILLNLLGQNLVL*PYRASGEAGKLNLY Trigger: ATAAAGATTTAATTTCCCAGCTTCTCCTGAAGCTCGGTATGGCCACAACACTAAATTCTGCCCGAGGAGATTAAGCAAAATAGTATGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CCA 72 bp | ATCTTCGTGGGACCCATCGAGAGGTTGTTTAAAGACTaGCACCCGCTCCCGCGCCCAGGTGGGGAAAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: IFVGPIERLFKD*HPLPRPGGERA Trigger: AGCCCTTTCCCCACCTGGGCGCGGGAGCGGGTGCCAGTCTTTAAACAACCTCTCGATGGGTCCCACGAAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CAA 72 bp | GGGTCTGGAAACATCTTCGTGGGACCCATCGAGAGGTaGTTTAAAGACTGGCACCCGCTCCCGCGCCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GSGNIFVGPIER*FKDWHPLPRPG Trigger: ACCTGGGCGCGGGAGCGGGTGCCAGTCTTTAAACAACCTCTCGATGGGTCCCACGAAGATGTTTCCAGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS GCA 72 bp | GAGGCTTTCACCTTCCAGGATGGCTGCTTGGCCTCCTaGCATGGTCTTTGCGTTCCAGCCAGCAAAGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: EAFTFQDGCLAS*HGLCVPASKEE Trigger: TTCCTCTTTGCTGGCTGGAACGCAAAGACCATGGCAGGAGGCCAAGCAGCCATCCTGGAAGGTGAAAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS GCA 72 bp | ATTGCAGATGCCCATGTGCTCAGCAGAGAACTGGGGTaGTTCATTCTCGTTGCTTCTTCCACCGGCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: IADAHVLSRELG*FILVASSTGLS Trigger: GGAGAGGCCGGTGGAAGAAGCAACGAGAATGAAGCACCCCAGTTCTCTGCTGAGCACATGGGCATCTGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CCA 72 bp | TTTCACCTTCCAGGATGGCTGCTTGGCCTCCTGCCATaGTCTTTGCGTTCCAGCCAGCAAAGAGGAAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: FHLPGWLLGLLP*SLRSSQQRGRR Trigger: CCTTCTTCCTCTTTGCTGGCTGGAACGCAAAGACCATGGCAGGAGGCCAAGCAGCCATCCTGGAAGGTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CCA 72 bp | CTTAGTATGAGGCTTTCACCTTCCAGGATGGCTGCTTaGCCTCCTGCCATGGTCTTTGCGTTCCAGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LSMRLSPSRMAA*PPAMVFAFQPA Trigger: TGCTGGCTGGAACGCAAAGACCATGGCAGGAGGCCAAGCAGCCATCCTGGAAGGTGAAAGCCTCATACTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CAA 72 bp | ATGTGCTCAGCAGAGAACTGGGGTGCTTCATTCTCGTaGCTTCTTCCACCGGCCTCTCCGCGAGACATAGCT | + |
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Preference number: 6 (lower is better) Translates to: MCSAENWGASFS*LLPPASPRDIA Trigger: AGCTATGTCTCGCGGAGAGGCCGGTGGAAGAAGCAACGAGAATGAAGCACCCCAGTTCTCTGCTGAGCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS TCA 72 bp | CCCAGGCTCTTATTTCGCTGTCTGACGTCCTTAGTATaGGGCTTTCACCTTCCAGGATGGCTGCTTGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PRLLFRCLTSLV*GFHLPGWLLGL Trigger: GAGGCCAAGCAGCCATCCTGGAAGGTGAAAGCCTCATACTAAGGACGTCAGACAGCGAAATAAGAGCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CCA 72 bp | TCTCATATGAAAGGAGTCAAGGCAGACAGACCAGGATaGGGAGGGAGATGTCTACAGGGTCAAGGACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SHMKGVKADRPG*GGRCLQGQGPR Trigger: CCTGGGTCCTTGACCCTGTAGACATCTCCCTCCCCATCCTGGTCTGTCTGCCTTGACTCCTTTCATATGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CAA 90 bp | CAGATGCCCATGTGCTCAGCAGAGAACTGGGGTGCTTCATTCTCGTaGCTTCTTCCACCGGCCTCTCCGCGAGACATAGCTAAACTTGAA | + |
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Preference number: 6 (lower is better) Translates to: QMPMCSAENWGASFS*LLPPASPRDIAKLE Trigger: TTCAAGTTTAGCTATGTCTCGCGGAGAGGCCGGTGGAAGAAGCAACGAGAATGAAGCACCCCAGTTCTCTGCTGAGCACATGGGCATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CCA 72 bp | TCTTTATTGCAGATGCCCATGTGCTCAGCAGAGAACTaGGGTGCTTCATTCTCGTTGCTTCTTCCACCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SLLQMPMCSAEN*GASFSLLLPPA Trigger: GGCCGGTGGAAGAAGCAACGAGAATGAAGCACCCCAGTTCTCTGCTGAGCACATGGGCATCTGCAATAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CAA 90 bp | GTGGCCATACCGAGCTTCAGGAGAAGCTGGGAAATTAAATCTTTATaGCAGATGCCCATGTGCTCAGCAGAGAACTGGGGTGCTTCATTC | + |
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Preference number: 6 (lower is better) Translates to: VAIPSFRRSWEIKSL*QMPMCSAENWGASF Trigger: GAATGAAGCACCCCAGTTCTCTGCTGAGCACATGGGCATCTGCAATAAAGATTTAATTTCCCAGCTTCTCCTGAAGCTCGGTATGGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS GCA 72 bp | CGAGCTTCAGGAGAAGCTGGGAAATTAAATCTTTATTaGAGATGCCCATGTGCTCAGCAGAGAACTGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RASGEAGKLNLY*RCPCAQQRTGV Trigger: CACCCCAGTTCTCTGCTGAGCACATGGGCATCTGCAATAAAGATTTAATTTCCCAGCTTCTCCTGAAGCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CAA 72 bp | CCGAGCTTCAGGAGAAGCTGGGAAATTAAATCTTTATaGCAGATGCCCATGTGCTCAGCAGAGAACTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: PSFRRSWEIKSL*QMPMCSAENWG Trigger: ACCCCAGTTCTCTGCTGAGCACATGGGCATCTGCAATAAAGATTTAATTTCCCAGCTTCTCCTGAAGCTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS GCA 72 bp | AGCTGGGAAATTAAATCTTTATTGCAGATGCCCATGTaGTCAGCAGAGAACTGGGGTGCTTCATTCTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: SWEIKSLLQMPM*SAENWGASFSL Trigger: CAACGAGAATGAAGCACCCCAGTTCTCTGCTGAGCACATGGGCATCTGCAATAAAGATTTAATTTCCCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS GCA 72 bp | TCAGGAGAAGCTGGGAAATTAAATCTTTATTGCAGATaGCCATGTGCTCAGCAGAGAACTGGGGTGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SGEAGKLNLYCR*PCAQQRTGVLH Trigger: ATGAAGCACCCCAGTTCTCTGCTGAGCACATGGGCATCTGCAATAAAGATTTAATTTCCCAGCTTCTCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CCA 72 bp | ATTTTGCTTAATCTCCTCGGGCAGAATTTAGTGTTGTaGCCATACCGAGCTTCAGGAGAAGCTGGGAAATTA | + |
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Preference number: 6 (lower is better) Translates to: ILLNLLGQNLVL*PYRASGEAGKL Trigger: TAATTTCCCAGCTTCTCCTGAAGCTCGGTATGGCCACAACACTAAATTCTGCCCGAGGAGATTAAGCAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CAA 90 bp | CCTGCCCCTGACTTTAAAAACATTTCTTGGAAGTCCCATACTATTTaGCTTAATCTCCTCGGGCAGAATTTAGTGTTGTGGCCATACCGA | + |
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Preference number: 6 (lower is better) Translates to: PAPDFKNISWKSHTI*LNLLGQNLVLWPYR Trigger: TCGGTATGGCCACAACACTAAATTCTGCCCGAGGAGATTAAGCAAAATAGTATGGGACTTCCAAGAAATGTTTTTAAAGTCAGGGGCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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| CDS CAA 90 bp | AAGTCCCATACTATTTTGCTTAATCTCCTCGGGCAGAATTTAGTGTaGTGGCCATACCGAGCTTCAGGAGAAGCTGGGAAATTAAATCTT | + |
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Preference number: 6 (lower is better) Translates to: KSHTILLNLLGQNLV*WPYRASGEAGKLNL Trigger: AAGATTTAATTTCCCAGCTTCTCCTGAAGCTCGGTATGGCCACAACACTAAATTCTGCCCGAGGAGATTAAGCAAAATAGTATGGGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568654.1 |
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