Pregenerated sensors for CORT (Homo sapiens)
Ensembl gene IDs: ENSG00000241563Ensembl transcript IDs: ENST00000377049.4
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CATCAGAAGAAAAGCCCAGTGCCCGCACTCAGCACAGTCCAGTCGAACCACAAAGTCATTACACTTGCGTaGGCATTCATGGGTGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: HQKKSPVPALSTVQSNHKVITLA*AFMGEV Trigger: AACCTCACCCATGAATGCTCACGCAAGTGTAATGAC...TTTGTGGTTCGACTGGACTGTGCTGAGTGCGGGCACTGGGCTTTTCTTCTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGCTTCCCAGCACCATAATGAACATCAGAAGAAAAGCCCAGTGCCCGCACCAAAGATCTTCACTTTaGGTTCCAAATTACTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: TELPSTIMNIRRKAQCPHQRSSL*VPNYSR Trigger: TCTTGAGTAATTTGGAACCCAAAGTGAAGATCTTTG...GTGCGGGCACTGGGCTTTTCTTCTGATGTTCATTATGGTGCTGGGAAGCTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| 3UTR-3UTR CAA 90 bp | ATCAGAAGAAAAGCCCAGTGCCCGCACTCAGCACAGTCCAGTCGAACCACAAAAGGTCTGTCATTACACTaGCGTGAGCATTCATGGGTG | + |
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Preference number: 3 (lower is better) Translates to: IRRKAQCPHSAQSSRTTKGLSLH*REHSWV Trigger: CACCCATGAATGCTCACGCAAGTGTAATGACAGACC...TTTTGTGGTTCGACTGGACTGTGCTGAGTGCGGGCACTGGGCTTTTCTTCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| 3UTR GCA 72 bp | CCCAGCACCATAATGAACATCAGAAGAAAAGCCCAGTaGCCGCACTCAGCACAGTCCAGTCGAACCACAAAA | + |
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Preference number: 3 (lower is better) Translates to: PSTIMNIRRKAQ*PHSAQSSRTTK Trigger: TTTTGTGGTTCGACTGGACTGTGCTGAGTGCGGGCACTGGGCTTTTCTTCTGATGTTCATTATGGTGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| 3UTR-3UTR CAA 90 bp | GAGCTTCCCAGCACCATAATGAACATCAGAAGAAAAGCCCAGTGCCCGCACTCATCAAAGATCTTCACTTaGGGTTCCAAATTACTCAAG | + |
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Preference number: 3 (lower is better) Translates to: ELPSTIMNIRRKAQCPHSSKIFT*GSKLLK Trigger: CTTGAGTAATTTGGAACCCAAAGTGAAGATCTTTGA...TGAGTGCGGGCACTGGGCTTTTCTTCTGATGTTCATTATGGTGCTGGGAAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR CCA 90 bp | GAGCTTCCCAGCACCATAATGAACATCAGAAGAAAAGCCCAGTGCCCGCACTCACGCTGTCTCGGCCGGTaGGGCCACCCTCCAGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ELPSTIMNIRRKAQCPHSRCLGR*GHPPGA Trigger: TGCCCCTGGAGGGTGGCCCCACCGGCCGAGACAGCG...TGAGTGCGGGCACTGGGCTTTTCTTCTGATGTTCATTATGGTGCTGGGAAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR TCA 90 bp | GCTTCCCAGCACCATAATGAACATCAGAAGAAAAGCCCAGTGCCCGCACTCAGCGGGCTTCCTCTCCTATaGGGGGCCCGGCACTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ASQHHNEHQKKSPVPALSGLPLL*GARHWP Trigger: AGGCCAGTGCCGGGCCCCTCATAGGAGAGGAAGCCC...GCTGAGTGCGGGCACTGGGCTTTTCTTCTGATGTTCATTATGGTGCTGGGAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR CCA 90 bp | ACAGAGCTTCCCAGCACCATAATGAACATCAGAAGAAAAGCCCAGTGCCCGCACGGCCCGGCACTGGCCTaGGAGGTCCACTCAAACCAC | + |
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Preference number: 4 (lower is better) Translates to: TELPSTIMNIRRKAQCPHGPALA*EVHSNH Trigger: GTGGTTTGAGTGGACCTCCCAGGCCAGTGCCGGGCC...GTGCGGGCACTGGGCTTTTCTTCTGATGTTCATTATGGTGCTGGGAAGCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR GCA 90 bp | ATCAGAAGAAAAGCCCAGTGCCCGCACTCAGCACAGTCCAGTCGAACCACAAAATCTCTCCCACCCTGCTaGTGCTCTTCCTTCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: IRRKAQCPHSAQSSRTTKSLPPC*CSSFLA Trigger: TGCCAGGAAGGAAGAGCAGCAGCAGGGTGGGAGAGA...TTTTGTGGTTCGACTGGACTGTGCTGAGTGCGGGCACTGGGCTTTTCTTCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR GCA 90 bp | TCAGAAGAAAAGCCCAGTGCCCGCACTCAGCACAGTCCAGTCGAACCACAAAAAAGAAGAAAAGCCCAGTaGCCGCACTCAGCACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SEEKPSARTQHSPVEPQKRRKAQ*PHSAQS Trigger: GGACTGTGCTGAGTGCGGGCACTGGGCTTTTCTTCT...TTTTTGTGGTTCGACTGGACTGTGCTGAGTGCGGGCACTGGGCTTTTCTTCTGA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR CCA 90 bp | CACTGCTGCTTAATACATTTTATTCAGGTCTGTCATTACACTTGCGTGAGCATTCGCCTTCCTGCCGCCTaGCCACCTCCCGGGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: HCCLIHFIQVCHYTCVSIRLPAA*PPPGLP Trigger: AGGAAGCCCGGGAGGTGGCCAGGCGGCAGGAAGGCG...AATGCTCACGCAAGTGTAATGACAGACCTGAATAAAATGTATTAAGCAGCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR TCA 90 bp | GCTTCCCAGCACCATAATGAACATCAGAAGAAAAGCCCAGTGCCCGCACTCAGCGTGAGCATTCATGGGTaGGGTTTTATTTGCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ASQHHNEHQKKSPVPALSVSIHG*GFICRR Trigger: CCTCCTGCAAATAAAACCTCACCCATGAATGCTCAC...GCTGAGTGCGGGCACTGGGCTTTTCTTCTGATGTTCATTATGGTGCTGGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR CCA 90 bp | TCAGAAGAAAAGCCCAGTGCCCGCACTCAGCACAGTCCAGTCGAACCACAAAAATACATGTCTAACGCCTaGATCCTCTTCCCTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: SEEKPSARTQHSPVEPQKYMSNA*ILFPLP Trigger: GGGAAGAGGGAAGAGGATCCAGGCGTTAGACATGTA...TTTTTGTGGTTCGACTGGACTGTGCTGAGTGCGGGCACTGGGCTTTTCTTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR CCA 90 bp | AGCACCATAATGAACATCAGAAGAAAAGCCCAGTGCCCGCACTCAGCACAGTCCGACAATGGCATCTTGTaGGCTGACTGGAGCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: STIMNIRRKAQCPHSAQSDNGIL*ADWSFS Trigger: AGAGAAGCTCCAGTCAGCCCACAAGATGCCATTGTC...GGACTGTGCTGAGTGCGGGCACTGGGCTTTTCTTCTGATGTTCATTATGGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR TCA 90 bp | ATCAGAAGAAAAGCCCAGTGCCCGCACTCAGCACAGTCCAGTCGAACCACAAAAGTCATTACACTTGCGTaGGCATTCATGGGTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: IRRKAQCPHSAQSSRTTKVITLA*AFMGEV Trigger: AACCTCACCCATGAATGCTCACGCAAGTGTAATGAC...TTTTGTGGTTCGACTGGACTGTGCTGAGTGCGGGCACTGGGCTTTTCTTCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR CCA 90 bp | ACAGAGCTTCCCAGCACCATAATGAACATCAGAAGAAAAGCCCAGTGCCCGCACTTGCGTGAGCATTCATaGGTGAGGTTTTATTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: TELPSTIMNIRRKAQCPHLREHS*VRFYLQ Trigger: CTGCAAATAAAACCTCACCCATGAATGCTCACGCAA...GTGCGGGCACTGGGCTTTTCTTCTGATGTTCATTATGGTGCTGGGAAGCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR GCA 90 bp | CACTGCTGCTTAATACATTTTATTCAGGTCTGTCATTACACTTGCGTGAGCATTATTCCTGCCGCTTCCTaGATATGCTCGCTGTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: HCCLIHFIQVCHYTCVSIIPAAS*ICSLSR Trigger: CCGAGACAGCGAGCATATGCAGGAAGCGGCAGGAAT...AATGCTCACGCAAGTGTAATGACAGACCTGAATAAAATGTATTAAGCAGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR GCA 90 bp | ATCTTCACTTTGGGTTCCAAATTACTCAAGACACGTCAGTATTGGGCATTATTGTCCAGAAGAAGTTCCTaGAGGGCATTCTGTCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: IFTLGSKLLKTRQYWALLSRRSS*RAFCPG Trigger: GCCGGGACAGAATGCCCTGCAGGAACTTCTTCTGGA...CAATAATGCCCAATACTGACGTGTCTTGAGTAATTTGGAACCCAAAGTGAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR TCA 90 bp | TTATCAAAGATCTTCACTTTGGGTTCCAAATTACTCAAGACACGTCAGTATTGGCCTTCCTGGCAGCCCTaGAATCAATGTTTTGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LSKIFTLGSKLLKTRQYWPSWQP*NQCFGD Trigger: GTCCCCAAAACATTGATTTCAGGGCTGCCAGGAAGG...CCAATACTGACGTGTCTTGAGTAATTTGGAACCCAAAGTGAAGATCTTTGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR GCA 90 bp | CACTGCTGCTTAATACATTTTATTCAGGTCTGTCATTACACTTGCGTGAGCATTGGAAAGTCAGGAGGCTaGTTTTCCTTATTCCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: HCCLIHFIQVCHYTCVSIGKSGG*FSLFLP Trigger: CGGCAGGAATAAGGAAAAGCAGCCTCCTGACTTTCC...AATGCTCACGCAAGTGTAATGACAGACCTGAATAAAATGTATTAAGCAGCAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR CCA 90 bp | ATCTTTATCAAAGATCTTCACTTTGGGTTCCAAATTACTCAAGACACGTCAGTAATCTTGTGGGCTGACTaGAGCTTCTCTCCCACCCTG | + |
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Preference number: 4 (lower is better) Translates to: IFIKDLHFGFQITQDTSVILWAD*SFSPTL Trigger: CAGGGTGGGAGAGAAGCTCCAGTCAGCCCACAAGAT...TACTGACGTGTCTTGAGTAATTTGGAACCCAAAGTGAAGATCTTTGATAAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS GCA 90 bp | ATGGCATCTTGTGGGCTGACTGGAGCTTCTCTCCCACCCTGCTGCTaGTCTTCCTTCCTGGCAGCCCTGAAATCAATGTTTTGGGGACTT | + |
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Preference number: 5 (lower is better) Translates to: MASCGLTGASLPPCC*SSFLAALKSMFWGL Trigger: AAGTCCCCAAAACATTGATTTCAGGGCTGCCAGGAAGGAAGAGCAGCAGCAGGGTGGGAGAGAAGCTCCAGTCAGCCCACAAGATGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR CAA 90 bp | ACAGAGCTTCCCAGCACCATAATGAACATCAGAAGAAAAGCCCAGTGCCCGCACGGGGACAATGGCATCTaGTGGGCTGACTGGAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: TELPSTIMNIRRKAQCPHGDNGI*WADWSF Trigger: GAAGCTCCAGTCAGCCCACAAGATGCCATTGTCCCC...GTGCGGGCACTGGGCTTTTCTTCTGATGTTCATTATGGTGCTGGGAAGCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR CAA 90 bp | ACAGAGCTTCCCAGCACCATAATGAACATCAGAAGAAAAGCCCAGTGCCCGCACCAATGTTTTGGGGACTaGGGTCTCTTCTTTGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: TELPSTIMNIRRKAQCPHQCFGD*GLFFGA Trigger: AGCTCCAAAGAAGAGACCCAAGTCCCCAAAACATTG...GTGCGGGCACTGGGCTTTTCTTCTGATGTTCATTATGGTGCTGGGAAGCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR CAA 90 bp | TCAGAAGAAAAGCCCAGTGCCCGCACTCAGCACAGTCCAGTCGAACCACAAAAACCTGAAATCAATGTTTaGGGGACTTGGGTCTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SEEKPSARTQHSPVEPQKPEINV*GTWVSS Trigger: AGAAGAGACCCAAGTCCCCAAAACATTGATTTCAGG...TTTTTGTGGTTCGACTGGACTGTGCTGAGTGCGGGCACTGGGCTTTTCTTCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR CAA 90 bp | GCTTCCCAGCACCATAATGAACATCAGAAGAAAAGCCCAGTGCCCGCACTCAGCAATCTCCAGCTGTTTTaGTGTCTATACATGTCTAAC | + |
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Preference number: 5 (lower is better) Translates to: ASQHHNEHQKKSPVPALSNLQLF*CLYMSN Trigger: GTTAGACATGTATAGACACAAAAACAGCTGGAGATT...GCTGAGTGCGGGCACTGGGCTTTTCTTCTGATGTTCATTATGGTGCTGGGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR CAA 90 bp | TCAGAAGAAAAGCCCAGTGCCCGCACTCAGCACAGTCCAGTCGAACCACAAAAATCAAAGATCTTCACTTaGGGTTCCAAATTACTCAAG | + |
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Preference number: 5 (lower is better) Translates to: SEEKPSARTQHSPVEPQKSKIFT*GSKLLK Trigger: CTTGAGTAATTTGGAACCCAAAGTGAAGATCTTTGA...TTTTTGTGGTTCGACTGGACTGTGCTGAGTGCGGGCACTGGGCTTTTCTTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS TCA 90 bp | CATTTTATTCAGGTCTGTCATTACACTTGCGTGAGCATTCATGGGTaGGGTTTTATTTGCAGGAGGAGAAGGTCTTCCAGAAGAAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: HFIQVCHYTCVSIHG*GFICRRRRSSRRSS Trigger: GGAACTTCTTCTGGAAGACCTTCTCCTCCTGCAAATAAAACCTCACCCATGAATGCTCACGCAAGTGTAATGACAGACCTGAATAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR CAA 90 bp | TTATCAAAGATCTTCACTTTGGGTTCCAAATTACTCAAGACACGTCAGTATTGGGGTCTGTCATTACACTaGCGTGAGCATTCATGGGTG | + |
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Preference number: 5 (lower is better) Translates to: LSKIFTLGSKLLKTRQYWGLSLH*REHSWV Trigger: CACCCATGAATGCTCACGCAAGTGTAATGACAGACC...CCAATACTGACGTGTCTTGAGTAATTTGGAACCCAAAGTGAAGATCTTTGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS CCA 90 bp | AATACATTTTATTCAGGTCTGTCATTACACTTGCGTGAGCATTCATaGGTGAGGTTTTATTTGCAGGAGGAGAAGGTCTTCCAGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: NTFYSGLSLHLREHS*VRFYLQEEKVFQKK Trigger: CTTCTTCTGGAAGACCTTCTCCTCCTGCAAATAAAACCTCACCCATGAATGCTCACGCAAGTGTAATGACAGACCTGAATAAAATGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS-3UTR CAA 90 bp | ATCTTCACTTTGGGTTCCAAATTACTCAAGACACGTCAGTATTGGGCATTATTGACTTGGGTCTCTTCTTaGGAGCTTGGTGGGTATTTT | + |
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Preference number: 5 (lower is better) Translates to: IFTLGSKLLKTRQYWALLTWVSS*ELGGYF Trigger: AAAATACCCACCAAGCTCCAAAGAAGAGACCCAAGT...CAATAATGCCCAATACTGACGTGTCTTGAGTAATTTGGAACCCAAAGTGAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS CCA 72 bp | CGGGCTTCCTCTCCTATGAGGGGCCCGGCACTGGCCTaGGAGGTCCACTCAAACCACCAAGCGAGGAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: RASSPMRGPALA*EVHSNHQARKV Trigger: GACTTTCCTCGCTTGGTGGTTTGAGTGGACCTCCCAGGCCAGTGCCGGGCCCCTCATAGGAGAGGAAGCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS GCA 72 bp | AGCGAGGAAAGTCAGGAGGCTGCTTTTCCTTATTCCTaGCGCTTCCTGCATATGCTCGCTGTCTCGGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: SEESQEAAFPYS*RFLHMLAVSAG Trigger: ACCGGCCGAGACAGCGAGCATATGCAGGAAGCGGCAGGAATAAGGAAAAGCAGCCTCCTGACTTTCCTCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS CAA 72 bp | CTGCTCTTCCTTCCTGGCAGCCCTGAAATCAATGTTTaGGGGACTTGGGTCTCTTCTTTGGAGCTTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: LLFLPGSPEINV*GTWVSSLELGG Trigger: CCCACCAAGCTCCAAAGAAGAGACCCAAGTCCCCAAAACATTGATTTCAGGGCTGCCAGGAAGGAAGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS CAA 90 bp | ACCCTGCTGCTGCTCTTCCTTCCTGGCAGCCCTGAAATCAATGTTTaGGGGACTTGGGTCTCTTCTTTGGAGCTTGGTGGGTATTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: TLLLLFLPGSPEINV*GTWVSSLELGGYFK Trigger: CTTAAAATACCCACCAAGCTCCAAAGAAGAGACCCAAGTCCCCAAAACATTGATTTCAGGGCTGCCAGGAAGGAAGAGCAGCAGCAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS CAA 90 bp | TCTTTGGAGCTTGGTGGGTATTTTAAGCCCAATCTCCAGCTGTTTTaGTGTCTATACATGTCTAACGCCTGGATCCTCTTCCCTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: SLELGGYFKPNLQLF*CLYMSNAWILFPLP Trigger: GGGAAGAGGGAAGAGGATCCAGGCGTTAGACATGTATAGACACAAAAACAGCTGGAGATTGGGCTTAAAATACCCACCAAGCTCCAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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| CDS TCA 72 bp | CAGGTCTGTCATTACACTTGCGTGAGCATTCATGGGTaGGGTTTTATTTGCAGGAGGAGAAGGTCTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: QVCHYTCVSIHG*GFICRRRRSSR Trigger: TCTGGAAGACCTTCTCCTCCTGCAAATAAAACCTCACCCATGAATGCTCACGCAAGTGTAATGACAGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377049.4 |
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