RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CORO7 (Homo sapiens)

Ensembl gene IDs: ENSG00000262246

Ensembl transcript IDs: ENST00000251166.9, ENST00000537233.6, ENST00000570645.5, ENST00000570779.1, ENST00000570928.5, ENST00000571052.5, ENST00000571059.5, ENST00000571227.5, ENST00000571756.5, ENST00000572026.5, ENST00000572044.1, ENST00000572125.1, ENST00000572140.1, ENST00000572153.5, ENST00000572518.1, ENST00000572549.5, ENST00000572666.5, ENST00000572898.1, ENST00000573165.1, ENST00000573245.1, ENST00000573773.5, ENST00000574025.5, ENST00000574311.5, ENST00000574849.1, ENST00000575038.5, ENST00000575531.5, ENST00000575714.5, ENST00000575850.5, ENST00000576051.5, ENST00000576437.5, ENST00000576637.1, ENST00000577144.5, ENST00000614702.4, ENST00000617235.2, ENST00000631534.1, ENST00000631578.1, ENST00000631638.1, ENST00000631678.1, ENST00000631757.1, ENST00000631793.1, ENST00000631809.1, ENST00000631960.1, ENST00000632098.1, ENST00000632158.1, ENST00000632164.1, ENST00000632167.1, ENST00000632177.1, ENST00000632270.1, ENST00000632515.1, ENST00000632603.1, ENST00000632765.1, ENST00000632836.1, ENST00000632898.1, ENST00000632989.1, ENST00000633070.1, ENST00000633126.1, ENST00000633242.1, ENST00000633347.1, ENST00000633467.1, ENST00000633637.1, ENST00000633681.1, ENST00000633804.1, ENST00000633889.1, ENST00000634048.1

Found 1996 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCCGGACTCGGGGCAGCCGGAAGGCCACAGGCTCCAGGGAGGACTaGCGCAGCCGCAGGCACCGCATCAGCTCCACTTCCCGCACGTCG +
Preference number: 1 (lower is better)
Translates to: FRTRGSRKATGSRED*RSRRHRISSTSRTS
Trigger: CGACGTGCGGGAAGTGGAGCTGATGCGGTGCCTGCGGCTGCGTCAGTCCTCCCTGGAGCCTGTGGCCTTCCGGCTGCCCCGAGTCCGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR TCA 90 bp TGGCTGTGTCGCTCAGCTGTAGGACGCGGAGTACCTCGCAGCTCATaGCGGCCAGCGCCTGCCGGGGCACAAGGGCAGCCCCACGCAGCA +
Preference number: 1 (lower is better)
Translates to: WLCRSAVGRGVPRSS*RPAPAGAQGQPHAA
Trigger: TGCTGCGTGGGGCTGCCCTTGTGCCCCGGCAGGCGCTGGCCGTCATGAGCTGCGAGGTACTCCGCGTCCTACAGCTGAGCGACACAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR GCA 90 bp CACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTaGACCAGGTCCCCATGGGCTGCCAGCTCAGAATGCCGTCAGAGG +
Preference number: 1 (lower is better)
Translates to: HAVPTRAPSRLQTAL*TRSPWAASSECRQR
Trigger: CCTCTGACGGCATTCTGAGCTGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CCA 90 bp AGGGGTCCCAGGCCAGATCAGTCACAGCTGCCCCATTCTGCAGCGTaGGCAGTGCCGTGTCGGGCAGGCGGCCAGGCTTCCGTAGACAGC +
Preference number: 1 (lower is better)
Translates to: RGPRPDQSQLPHSAA*AVPCRAGGQASVDS
Trigger: GCTGTCTACGGAAGCCTGGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTGGCCTGGGACCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574311.5
ENST00000633467.1
3UTR TCA 90 bp GGCCAGGCTTCCGTAGCTCAAGCACAGCCACCTGTCCCCCGCTGCTaGGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGT +
Preference number: 1 (lower is better)
Translates to: GQASVAQAQPPVPRC*AAARPHAACWHRSR
Trigger: ACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGGTGGCTGTGCTTGAGCTACGGAAGCCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CCA 90 bp TCTGCACCTGCTGGTTGTCCCCAGCCCACCAGCTATGGGGGTCGGTaGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCGTGGA +
Preference number: 1 (lower is better)
Translates to: SAPAGCPQPTSYGGR*QAHSRQCPGTGPRG
Trigger: TCCACGAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGCTGGTGGGCTGGGGACAACCAGCAGGTGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR CCA 90 bp AGGCTGACCTTCTGCACCTGCTGGTTGTCCCCAGCCCACCAGCTATaGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGG +
Preference number: 1 (lower is better)
Translates to: RLTFCTCWLSPAHQL*GSVAGTQPAVSGNR
Trigger: CCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGCTGGTGGGCTGGGGACAACCAGCAGGTGCAGAAGGTCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR CCA 90 bp AGGGGTCCCAGGCCAGATCAGTCACAGCTGCCCCATTCTGCAGCGTaGGCAGTGCCGTGTCGGGCAGGCGGCCAGGCTTCCGTAGCTCAA +
Preference number: 1 (lower is better)
Translates to: RGPRPDQSQLPHSAA*AVPCRAGGQASVAQ
Trigger: TTGAGCTACGGAAGCCTGGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTGGCCTGGGACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR GCA 90 bp CTCACTGGGCTCATGTCAGGAGGCTGCAGGCTGAGAAGCCAGGGCTaGCCATTAGCGCCTTGCAGCCAGGCCTCGGCACTGAGCACAGGC +
Preference number: 1 (lower is better)
Translates to: LTGLMSGGCRLRSQG*PLAPCSQASALSTG
Trigger: GCCTGTGCTCAGTGCCGAGGCCTGGCTGCAAGGCGCTAATGGGCAGCCCTGGCTTCTCAGCCTGCAGCCTCCTGACATGAGCCCAGTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CCA 90 bp GGAACTTGGAACTGGGGCCCAGCAGGCTCTGCAGCGACCTCAAACTaGGGCTGGTCCCGATGCCACTGGTGCTGGAGAGTGAGGGCCCCA +
Preference number: 1 (lower is better)
Translates to: GTWNWGPAGSAATSN*GWSRCHWCWRVRAP
Trigger: TGGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGTCGCTGCAGAGCCTGCTGGGCCCCAGTTCCAAGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR CCA 90 bp ACAGTGGTGCCTGCTGCGCTCACCAGAATGCCGTCAGAGGTGGGGTaGAACTGCAGTACCTCCACTGGGAGGTCCTCGGGGCCCAGCACC +
Preference number: 1 (lower is better)
Translates to: TVVPAALTRMPSEVG*NCSTSTGRSSGPST
Trigger: GGTGCTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR GCA 90 bp ACACAAGGTGCTCCCAGGTGCCCATCCATGCCAGCCGGCTATCCCTaGTGTTCTCATGGGCCTGCGTGCTCTGAGAGGCCCGCGGCTTTG +
Preference number: 1 (lower is better)
Translates to: TQGAPRCPSMPAGYP*CSHGPACSERPAAL
Trigger: CAAAGCCGCGGGCCTCTCAGAGCACGCAGGCCCATGAGAACAGCAGGGATAGCCGGCTGGCATGGATGGGCACCTGGGAGCACCTTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR GCA 90 bp CAGGGGCTGCTGCTTGGCTGCGTCCCAGACCTTCACAGTGGTGCCTaGTGCGCTCACCAGAATGCCGTCAGAGGTGGGGTGGAACTGCAG +
Preference number: 1 (lower is better)
Translates to: QGLLLGCVPDLHSGA*CAHQNAVRGGVELQ
Trigger: CTGCAGTTCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR CCA 90 bp CCTTCACAGTGGTGCCTGCTGCGCTCACCAGAATGCCGTCAGAGGTaGGGTGGAACTGCAGTACCTCCACTGGGAGGTCCTCGGGGCCCA +
Preference number: 1 (lower is better)
Translates to: PSQWCLLRSPECRQR*GGTAVPPLGGPRGP
Trigger: TGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR CCA 90 bp GCTCTGTCAGGGGCTGCTGCTTGGCTGCGTCCCAGACCTTCACAGTaGTGCCTGCTGCGCTCACCAGAATGCCGTCAGAGGTGGGGTGGA +
Preference number: 1 (lower is better)
Translates to: ALSGAAAWLRPRPSQ*CLLRSPECRQRWGG
Trigger: TCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGCCCCTGACAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR TCA 90 bp CCCTTGAGGTTGGTGATGTGGCTGTCTCGGTGCAGGACAGTGCCCTaGGCATGGCGGAACTTGGAACTGGGGCCCAGCAGGCTCTGCAGC +
Preference number: 1 (lower is better)
Translates to: PLRLVMWLSRCRTVP*AWRNLELGPSRLCS
Trigger: GCTGCAGAGCCTGCTGGGCCCCAGTTCCAAGTTCCGCCATGCTCAGGGCACTGTCCTGCACCGAGACAGCCACATCACCAACCTCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR GCA 90 bp TGGCAGCCCAGGTGGGCCACGCGTCGCTTGTCCTCTCCTTGGCCTTaGAGAGGCACAATGCCCAGTACACCAGGACGGTCGGAGTTGAAG +
Preference number: 1 (lower is better)
Translates to: WQPRWATRRLSSPWP*RGTMPSTPGRSELK
Trigger: CTTCAACTCCGACCGTCCTGGTGTACTGGGCATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCGACGCGTGGCCCACCTGGGCTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR GCA 90 bp GGGCTGCTGCTTGGCTGCGTCCCAGACCTTCACAGTGGTGCCTGCTaGGCTCACCAGAATGCCGTCAGAGGTGGGGTGGAACTGCAGTAC +
Preference number: 1 (lower is better)
Translates to: GLLLGCVPDLHSGAC*AHQNAVRGGVELQY
Trigger: GTACTGCAGTTCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR GCA 90 bp CTGTCAGGGGCTGCTGCTTGGCTGCGTCCCAGACCTTCACAGTGGTaGCTGCTGCGCTCACCAGAATGCCGTCAGAGGTGGGGTGGAACT +
Preference number: 1 (lower is better)
Translates to: LSGAAAWLRPRPSQW*LLRSPECRQRWGGT
Trigger: AGTTCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGCCCCTGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR CCA 90 bp TCTGAATGGCAGCCCAGGTGGGCCACGCGTCGCTTGTCCTCTCCTTaGCCTTGCAGAGGCACAATGCCCAGTACACCAGGACGGTCGGAG +
Preference number: 1 (lower is better)
Translates to: SEWQPRWATRRLSSP*PCRGTMPSTPGRSE
Trigger: CTCCGACCGTCCTGGTGTACTGGGCATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCGACGCGTGGCCCACCTGGGCTGCCATTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CCA 90 bp GGAACTCCACAGCCTTGCGGGGCACATGGTAGCCGATGGGCACGATaGCTGTGTCGCTCAGCTGTAGGACGCGGAGTACCTCGCAGCTCA +
Preference number: 1 (lower is better)
Translates to: GTPQPCGAHGSRWAR*LCRSAVGRGVPRSS
Trigger: TGAGCTGCGAGGTACTCCGCGTCCTACAGCTGAGCGACACAGCCATCGTGCCCATCGGCTACCATGTGCCCCGCAAGGCTGTGGAGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR TCA 90 bp ACAGCAGGCAAGATGGGGCAGCGTGGGGTGACCAAAGATCCTGGATaGGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGTGAGACC +
Preference number: 1 (lower is better)
Translates to: TAGKMGQRGVTKDPG*GQSRLGPAQVSSET
Trigger: GGTCTCACTGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTGCCTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR GCA 90 bp CTGCGTCCCAGACCTTCACAGTGGTGCCTGCTGCGCTCACCAGAATaGCGTCAGAGGTGGGGTGGAACTGCAGTACCTCCACTGGGAGGT +
Preference number: 1 (lower is better)
Translates to: LRPRPSQWCLLRSPE*RQRWGGTAVPPLGG
Trigger: ACCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGGACGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR CCA 90 bp CCAGGCCTCGGCACTGAGCACAGGCTCCCAGATCACAGCCGTGTCTaGGAACACGTCATCCTGGAAGAACTCTTTCCGGACTCGGGGCAG +
Preference number: 1 (lower is better)
Translates to: PGLGTEHRLPDHSRV*EHVILEELFPDSGQ
Trigger: CTGCCCCGAGTCCGGAAAGAGTTCTTCCAGGATGACGTGTTCCCAGACACGGCTGTGATCTGGGAGCCTGTGCTCAGTGCCGAGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR TCA 90 bp GGTGGCCGGGCTTCGGATCCCAGCTCCACCACTTACACAGCTGTGTaGCCCGGGCAGGTCACTAAACCTCTCTGTGCCTCTTCTCCCTCA +
Preference number: 1 (lower is better)
Translates to: GGRASDPSSTTYTAV*PGQVTKPLCASSPS
Trigger: TGAGGGAGAAGAGGCACAGAGAGGTTTAGTGACCTGCCCGGGTCACACAGCTGTGTAAGTGGTGGAGCTGGGATCCGAAGCCCGGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571756.5
ENST00000633681.1
3UTR GCA 90 bp CAGCTGACCCCAGAGACAGCAGAGGTGAAAACAGTCCCTGGGAACTaGCAGAGGCCCAGAGGATGTGGAAGTGCCCACGGGAAGGCAGGA +
Preference number: 1 (lower is better)
Translates to: QLTPETAEVKTVPGN*QRPRGCGSAHGKAG
Trigger: TCCTGCCTTCCCGTGGGCACTTCCACATCCTCTGGGCCTCTGGCAGTTCCCAGGGACTGTTTTCACCTCTGCTGTCTCTGGGGTCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR GCA 90 bp GATGCGAACAGTGAGGTCATAGGAGGACGAGGCCAGCACATTGGCTaGCAGTGGGTGGAAGCGCAGGGAGCAGATCTTCTCCGTGTGGCC +
Preference number: 1 (lower is better)
Translates to: DANSEVIGGRGQHIG*QWVEAQGADLLRVA
Trigger: GGCCACACGGAGAAGATCTGCTCCCTGCGCTTCCACCCACTGGCAGCCAATGTGCTGGCCTCGTCCTCCTATGACCTCACTGTTCGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
3UTR TCA 90 bp GCTTCAGCCGATCAGCTCCAGCCTGAAGGTCCCAGATGCGAACAGTaGGGTCATAGGAGGACGAGGCCAGCACATTGGCTGCCAGTGGGT +
Preference number: 1 (lower is better)
Translates to: ASADQLQPEGPRCEQ*GHRRTRPAHWLPVG
Trigger: ACCCACTGGCAGCCAATGTGCTGGCCTCGTCCTCCTATGACCTCACTGTTCGCATCTGGGACCTTCAGGCTGGAGCTGATCGGCTGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
3UTR CCA 90 bp AAGGCCCTTGACCAGAACTGGAACAGCAGGCAAGATGGGGCAGCGTaGGGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACC +
Preference number: 1 (lower is better)
Translates to: KALDQNWNSRQDGAA*GDQRSWMRPIQAGT
Trigger: GGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTGCCTGCTGTTCCAGTTCTGGTCAAGGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR GCA 90 bp TTCACTTCGCGCTCACGCATCTGGTTGAATCCAGTAGACACAAGGTaGTCCCAGGTGCCCATCCATGCCAGCCGGCTATCCCTGCTGTTC +
Preference number: 1 (lower is better)
Translates to: FTSRSRIWLNPVDTR*SQVPIHASRLSLLF
Trigger: GAACAGCAGGGATAGCCGGCTGGCATGGATGGGCACCTGGGAGCACCTTGTGTCTACTGGATTCAACCAGATGCGTGAGCGCGAAGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CCA 90 bp GGACGGTCGGAGTTGAAGGCGATCAAGCTGCAGCTTGATTTGATGTaGTTCCTGCATGAAGGGGCGGTTCCTGCTCGAATGTCACTGATC +
Preference number: 1 (lower is better)
Translates to: GRSELKAIKLQLDLM*FLHEGAVPARMSLI
Trigger: GATCAGTGACATTCGAGCAGGAACCGCCCCTTCATGCAGGAACCACATCAAATCAAGCTGCAGCTTGATCGCCTTCAACTCCGACCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR TCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCGCAGGAGTGCAGGGGTaGCATGTGCCGGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: PATLHPWPHASGQLMSSSAGVQG*HVPGPE
Trigger: CTCTGGCCCCGGCACATGTCACCCCTGCACTCCTGC...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR TCA 90 bp GGTGAGGTGGAGGTGACGGGGGCGCAGGCTAGTCCCACTCGTCCTCGTCCACGCGCAGGAGTGCAGGGGTaGCATGTGCCGGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: GEVEVTGAQASPTRPRPRAGVQG*HVPGPE
Trigger: CTCTGGCCCCGGCACATGTCACCCCTGCACTCCTGC...GCGTGGACGAGGACGAGTGGGACTAGCCTGCGCCCCCGTCACCTCCACCTCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR TCA 90 bp CGGGGAGCAGCTCGTACAGGAATACACGGGTGTCGCCCTTGCCGGTCAGGAGCACACCACCCCGGGTGCTaGGGGCAGGGCCTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: RGAARTGIHGCRPCRSGAHHPGC*GQGLAR
Trigger: CCTGGCCAGGCCCTGCCCTCAGCACCCGGGGTGGTG...TGCTCCTGACCGGCAAGGGCGACACCCGTGTATTCCTGTACGAGCTGCTCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR TCA 90 bp CACCAGACAGGAAGTGAAGCTCGGGTGGGGCCGGCAGGCGGGGTTGAGGCTGACGCGAGGTGTCCAAGGTaGGGGAGGCCAGGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: HQTGSEARVGPAGGVEADARCPR*GRPGRW
Trigger: CCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGC...GTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTGTCTGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR-3UTR GCA 90 bp CACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGGCAGCTCTGTCAGGGGCTaGTGCTTGGCTGCGTCCCAG +
Preference number: 2 (lower is better)
Translates to: HQGSISAPDGALHQVPMGSSVRG*CLAASQ
Trigger: CTGGGACGCAGCCAAGCAGCAGCCCCTGACAGAGCT...GCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR-3UTR CCA 90 bp GGTGAGGTGGAGGTGACGGGGGCGCAGGCTAGTCCCACTCGTCCTCGTCCACGCGAGGCCCAGAGGATGTaGAAGTGCCCACGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: GEVEVTGAQASPTRPRPREAQRM*KCPREG
Trigger: GCCTTCCCGTGGGCACTTCCACATCCTCTGGGCCTC...GCGTGGACGAGGACGAGTGGGACTAGCCTGCGCCCCCGTCACCTCCACCTCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR CCA 90 bp TGGGCAGTGCCGTGTCGGGCAGGCGGCCAGGCTTCCGTAGCTCAAGCACAGCCAGAATGGCAGCCCAGGTaGGCCACGCGTCGCTTGTCC +
Preference number: 2 (lower is better)
Translates to: WAVPCRAGGQASVAQAQPEWQPR*ATRRLS
Trigger: GGACAAGCGACGCGTGGCCCACCTGGGCTGCCATTC...TGGCTGTGCTTGAGCTACGGAAGCCTGGCCGCCTGCCCGACACGGCACTGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CCA 90 bp GACCTCAAACTGGGGCTGGTCCCGATGCCACTGGTGCTGGAGAGTGAGGGCCCCGAAGTGAAGCTCGGGTaGGGCCGGCAGGCGGGGTTG +
Preference number: 2 (lower is better)
Translates to: DLKLGLVPMPLVLESEGPEVKLG*GRQAGL
Trigger: CAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTC...GGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR-3UTR TCA 90 bp GCGACCATCACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGGCAGGAGTGCAGGGGTaGCATGTGCCGGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: ATITYPDNASSASSLGPWAGVQG*HVPGPE
Trigger: CTCTGGCCCCGGCACATGTCACCCCTGCACTCCTGC...CCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp AGGGAGGCCAGGGCGCTGGAGAAGAACCGCGTGTCCCACAGCTTCACTTCGCGCAACATCCAAGGCAGGTaGGGGCCAGTCCCTGCGGGG +
Preference number: 2 (lower is better)
Translates to: REARALEKNRVSHSFTSRNIQGR*GPVPAG
Trigger: CCCCGCAGGGACTGGCCCGCACCTGCCTTGGATGTT...GCGCGAAGTGAAGCTGTGGGACACGCGGTTCTTCTCCAGCGCCCTGGCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp GTGGGTCCTCCCGGTTCCCCAGTTTTGCCACCATGGCATTCAGCAGCTCCTCCTCTGCAGCGTGGGCAGTaGCGTGTCGGGCAGGCGGCC +
Preference number: 2 (lower is better)
Translates to: VGPPGSPVLPPWHSAAPPLQRGQ*RVGQAA
Trigger: GGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAG...AGGAGGAGCTGCTGAATGCCATGGTGGCAAAACTGGGGAACCGGGAGGACCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp GCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGCTTCACAGTGGTGCCTaGTGCGCTCACCAGAATGCC +
Preference number: 2 (lower is better)
Translates to: ARRAHQGSISAPDGALHQLHSGA*CAHQNA
Trigger: GGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAG...CTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR-3UTR CCA 90 bp GACCTCAAACTGGGGCTGGTCCCGATGCCACTGGTGCTGGAGAGTGAGGGCCCCCTGCAGTACCTCCACTaGGAGGTCCTCGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: DLKLGLVPMPLVLESEGPLQYLH*EVLGAQ
Trigger: CTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAG...GGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CCA 90 bp GCTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCGGGAGGCCAGGGCGCTaGAGAAGAACCGCGTGTCCC +
Preference number: 2 (lower is better)
Translates to: AEQRHGHTQLVGTEAVTLGRPGR*RRTACP
Trigger: GGGACACGCGGTTCTTCTCCAGCGCCCTGGCCTCCC...GAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR-3UTR CCA 90 bp TTCCCGCACGTCGCACTCCGTCTTAGGCAGGAGGACGAGGCCCTTGTGGGGGTCGACACACTGGGTCACTaGGCTCAGCGCCGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: FPHVALRLRQEDEALVGVDTLGH*AQRRLL
Trigger: CAGCAGCCGGCGCTGAGCCCAGTGACCCAGTGTGTC...GACCCCCACAAGGGCCTCGTCCTCCTGCCTAAGACGGAGTGCGACGTGCGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CCA 90 bp GCCGGGCTTCGGATCCCAGCTCCACCACTTACACAGCTGTGTGACCCGGGCAGGCCAGCCCACCAGCTATaGGGGTCGGTGGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: AGLRIPAPPLTQLCDPGRPAHQL*GSVAGT
Trigger: TGTGCCTGCCACCGACCCCCATAGCTGGTGGGCTGG...CCTGCCCGGGTCACACAGCTGTGTAAGTGGTGGAGCTGGGATCCGAAGCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571756.5
ENST00000633681.1
3UTR-3UTR CCA 90 bp GGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGATTGGCTGCCAGTGGGTaGAAGCGCAGGGAGCAGATC +
Preference number: 2 (lower is better)
Translates to: GAQGHSGACRPAHAHPCRLAASG*KRREQI
Trigger: GATCTGCTCCCTGCGCTTCCACCCACTGGCAGCCAA...TCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
3UTR-3UTR CCA 90 bp TGCTCACCTTGCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCCCCAGACCTTCACAGTaGTGCCTGCTGCGCTCACCA +
Preference number: 2 (lower is better)
Translates to: CSPCTPCPPGLHLGSRRRPRPSQ*CLLRSP
Trigger: TGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGG...GCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGTGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR CAA 90 bp GCCACCTGTCCCCCGCTGCTGAGCAGCGGCACGGCCACACGCAGCTaGTTGGCACAGAAGCCGTCACTCTCACCAGGTGTGGTGAGGTTG +
Preference number: 2 (lower is better)
Translates to: ATCPPLLSSGTATRS*LAQKPSLSPGVVRL
Trigger: CAACCTCACCACACCTGGTGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR CAA 90 bp GTCAGGAGGCTGCAGGCTGAGAAGCCAGGGCTGCCCATTAGCGCCTaGCAGCCAGGCCTCGGCACTGAGCACAGGCTCCCAGATCACAGC +
Preference number: 2 (lower is better)
Translates to: VRRLQAEKPGLPISA*QPGLGTEHRLPDHS
Trigger: GCTGTGATCTGGGAGCCTGTGCTCAGTGCCGAGGCCTGGCTGCAAGGCGCTAATGGGCAGCCCTGGCTTCTCAGCCTGCAGCCTCCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp GGACTGACGCAGCCGCAGGCACCGCATCAGCTCCACTTCCCGCACGTCGCACTCCAGGTCCCCATGGGCTaGCAGCTCAGAATGCCGTCA +
Preference number: 2 (lower is better)
Translates to: GLTQPQAPHQLHFPHVALQVPMG*QLRMPS
Trigger: TGACGGCATTCTGAGCTGGCAGCCCATGGGGACCTG...GAGTGCGACGTGCGGGAAGTGGAGCTGATGCGGTGCCTGCGGCTGCGTCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp GCTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCCTCCAGACGGCGCTCTaGACCAGGTCCCCATGGGCT +
Preference number: 2 (lower is better)
Translates to: AEQRHGHTQLVGTEAVTLLQTAL*TRSPWA
Trigger: AGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAG...GAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp GACCTCAAACTGGGGCTGGTCCCGATGCCACTGGTGCTGGAGAGTGAGGGCCCCCCTCTCGCCCTTTCCTaGCAGGACCAGGAGCCCAGA +
Preference number: 2 (lower is better)
Translates to: DLKLGLVPMPLVLESEGPPLALS*QDQEPR
Trigger: TCTGGGCTCCTGGTCCTGGCAGGAAAGGGCGAGAGG...GGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR-3UTR GCA 90 bp TGGGCAGTGCCGTGTCGGGCAGGCGGCCAGGCTTCCGTAGCTCAAGCACAGCCAGGAACTCCACAGCCTTaGGGGGCACATGGTAGCCGA +
Preference number: 2 (lower is better)
Translates to: WAVPCRAGGQASVAQAQPGTPQP*GAHGSR
Trigger: TCGGCTACCATGTGCCCCGCAAGGCTGTGGAGTTCC...TGGCTGTGCTTGAGCTACGGAAGCCTGGCCGCCTGCCCGACACGGCACTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp TCACCTTGCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTCACAGTGGTGCCTGCTaGGCTCACCAGAATGCCGTC +
Preference number: 2 (lower is better)
Translates to: SPCTPCPPGLHLGSRRRSHSGAC*AHQNAV
Trigger: GACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTG...AGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR-3UTR CCA 90 bp GGACTGACGCAGCCGCAGGCACCGCATCAGCTCCACTTCCCGCACGTCGCACTCTGTCTGGGTCGTAGCTaGGCAGCAGGGTTGAGGGAG +
Preference number: 2 (lower is better)
Translates to: GLTQPQAPHQLHFPHVALCLGRS*AAGLRE
Trigger: CTCCCTCAACCCTGCTGCCCAGCTACGACCCAGACA...GAGTGCGACGTGCGGGAAGTGGAGCTGATGCGGTGCCTGCGGCTGCGTCAGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CAA 90 bp ACCTGTCCCCCGCTGCTGAGCAGCGGCACGGCCACACGCAGCTTGTaGGCACAGAAGCCGTCACTCTCACCAGGTGTGGTGAGGTTGAGC +
Preference number: 2 (lower is better)
Translates to: TCPPLLSSGTATRSL*AQKPSLSPGVVRLS
Trigger: GCTCAACCTCACCACACCTGGTGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR-3UTR TCA 90 bp GCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGCAGAGACAGCAGAGGTaGAAACAGTCCCTGGGAACT +
Preference number: 2 (lower is better)
Translates to: ARRAHQGSISAPDGALHQQRQQR*KQSLGT
Trigger: AGTTCCCAGGGACTGTTTTCACCTCTGCTGTCTCTG...CTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR TCA 90 bp CTGAGAAGCCAGGGCTGCCCATTAGCGCCTTGCAGCCAGGCCTCGGCACTGAGCGGACCATCAGCTCTGTaGTGCCCCCTTCTCCTGGCT +
Preference number: 2 (lower is better)
Translates to: LRSQGCPLAPCSQASALSGPSAL*CPLLLA
Trigger: AGCCAGGAGAAGGGGGCATCACAGAGCTGATGGTCC...GCTCAGTGCCGAGGCCTGGCTGCAAGGCGCTAATGGGCAGCCCTGGCTTCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp GGACTGACGCAGCCGCAGGCACCGCATCAGCTCCACTTCCCGCACGTCGCACTCCAGAGGATGTGGAAGTaGCCACGGGAAGGCAGGAGT +
Preference number: 2 (lower is better)
Translates to: GLTQPQAPHQLHFPHVALQRMWK*PREGRS
Trigger: ACTCCTGCCTTCCCGTGGGCACTTCCACATCCTCTG...GAGTGCGACGTGCGGGAAGTGGAGCTGATGCGGTGCCTGCGGCTGCGTCAGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp GGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGGCTGCCAGCTTGCAGAGGCACAATaGCCAGTACACCAGGACGGT +
Preference number: 2 (lower is better)
Translates to: GSISAPDGALHQVPMGCQLAEAQ*PVHQDG
Trigger: ACCGTCCTGGTGTACTGGGCATTGTGCCTCTGCAAG...CTGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp ACACTGGGTCACTGGGCTCAGCGCCGGCTGCTGCGGGACCACCTCGTAACAGTACCAGGTGCCCATCCATaGCAGCCGGCTATCCCTGCT +
Preference number: 2 (lower is better)
Translates to: TLGHWAQRRLLRDHLVTVPGAHP*QPAIPA
Trigger: AGCAGGGATAGCCGGCTGGCATGGATGGGCACCTGG...TACTGTTACGAGGTGGTCCCGCAGCAGCCGGCGCTGAGCCCAGTGACCCAGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp ACACTGGGTCACTGGGCTCAGCGCCGGCTGCTGCGGGACCACCTCGTAACAGTACCTCTCGCCCTTTCCTaGCAGGACCAGGAGCCCAGA +
Preference number: 2 (lower is better)
Translates to: TLGHWAQRRLLRDHLVTVPLALS*QDQEPR
Trigger: TCTGGGCTCCTGGTCCTGGCAGGAAAGGGCGAGAGG...TACTGTTACGAGGTGGTCCCGCAGCAGCCGGCGCTGAGCCCAGTGACCCAGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR-3UTR CCA 90 bp TGGGCAGTGCCGTGTCGGGCAGGCGGCCAGGCTTCCGTAGCTCAAGCACAGCCAGGTGAAAACAGTCCCTaGGAACTGCCAGAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: WAVPCRAGGQASVAQAQPGENSP*ELPEAQ
Trigger: CTGGGCCTCTGGCAGTTCCCAGGGACTGTTTTCACC...TGGCTGTGCTTGAGCTACGGAAGCCTGGCCGCCTGCCCGACACGGCACTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CCA 90 bp CACCAGACAGGAAGTGAAGCTCGGGTGGGGCCGGCAGGCGGGGTTGAGGCTGACAGCCGATGGGCACGATaGCTGTGTCGCTCAGCTGTA +
Preference number: 2 (lower is better)
Translates to: HQTGSEARVGPAGGVEADSRWAR*LCRSAV
Trigger: TACAGCTGAGCGACACAGCCATCGTGCCCATCGGCT...GTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTGTCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR-3UTR CCA 90 bp TCTGCAGCGACCTCAAACTGGGGCTGGTCCCGATGCCACTGGTGCTGGAGAGTGCCAGCCCACCAGCTATaGGGGTCGGTGGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: SAATSNWGWSRCHWCWRVPAHQL*GSVAGT
Trigger: TGTGCCTGCCACCGACCCCCATAGCTGGTGGGCTGG...CACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGTCGCTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR-3UTR TCA 90 bp TGGAACAGCAGGCAAGATGGGGCAGCGTGGGGTGACCAAAGATCCTGGATGAGGGCAGGAGTGCAGGGGTaGCATGTGCCGGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: WNSRQDGAAWGDQRSWMRAGVQG*HVPGPE
Trigger: CTCTGGCCCCGGCACATGTCACCCCTGCACTCCTGC...CCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTGCCTGCTGTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR TCA 90 bp TGGGTCCTCCCGGTTCCCCAGTTTTGCCACCATGGCATTCAGCAGCTCCTCCTTGCAGGAGTGCAGGGGTaGCATGTGCCGGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: WVLPVPQFCHHGIQQLLLAGVQG*HVPGPE
Trigger: CTCTGGCCCCGGCACATGTCACCCCTGCACTCCTGC...AAGGAGGAGCTGCTGAATGCCATGGTGGCAAAACTGGGGAACCGGGAGGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR TCA 90 bp GCTGCTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCAGGACGGTCGGAGTTaGAGGCGATCAAGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: AAEQRHGHTQLVGTEAVTQDGRS*RRSSCS
Trigger: GCTGCAGCTTGATCGCCTTCAACTCCGACCGTCCTG...AGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGCAGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR TCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGCAGGTGAGGTGGAGGTaGCGGGGGCGCAGGCTAGTC +
Preference number: 2 (lower is better)
Translates to: VTCAGAREVSSSLRMSREQVRWR*RGRRLV
Trigger: GACTAGCCTGCGCCCCCGTCACCTCCACCTCACCTG...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR GCA 90 bp GCTGCTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTTGCAGGGGTGACATGTaGCGGGGCCAGAGAGGTATC +
Preference number: 2 (lower is better)
Translates to: AAEQRHGHTQLVGTEAVTCRGDM*RGQRGI
Trigger: GATACCTCTCTGGCCCCGGCACATGTCACCCCTGCA...AGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp CGGGGAGCAGCTCGTACAGGAATACACGGGTGTCGCCCTTGCCGGTCAGGAGCAACCCTCGCTTGCGTCTaGATCACCCACGGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: RGAARTGIHGCRPCRSGATLACV*ITHGCL
Trigger: GAGACACCCGTGGGTGATGCAGACGCAAGCGAGGGT...TGCTCCTGACCGGCAAGGGCGACACCCGTGTATTCCTGTACGAGCTGCTCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CCA 90 bp CTGCTTGTCCTTGCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCCGCTTGTCCTCTCCTTaGCCTTGCAGAGGCACAATG +
Preference number: 2 (lower is better)
Translates to: LLVLARRAHQGSISAPDGRLSSP*PCRGTM
Trigger: CATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCG...GCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGACAAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CCA 90 bp GACCTCAAACTGGGGCTGGTCCCGATGCCACTGGTGCTGGAGAGTGAGGGCCCCCCCGCGGCTTTGTTCTaGGGTCAAAGATCCGCAGCT +
Preference number: 2 (lower is better)
Translates to: DLKLGLVPMPLVLESEGPPAALF*GQRSAA
Trigger: AGCTGCGGATCTTTGACCCCAGAACAAAGCCGCGGG...GGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGTC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CCA 90 bp ACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGGCCTTCCTGGCCAGGCTGAAGATCTaGTCTTGGTGGCCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: TYPDNASSASSLGPWAFLARLKI*SWWPCS
Trigger: GCTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGC...CAGGAAGGCCCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
3UTR CAA 90 bp ATGGCAGCCCAGGTGGGCCACGCGTCGCTTGTCCTCTCCTTGGCCTaGCAGAGGCACAATGCCCAGTACACCAGGACGGTCGGAGTTGAA +
Preference number: 2 (lower is better)
Translates to: MAAQVGHASLVLSLA*QRHNAQYTRTVGVE
Trigger: TTCAACTCCGACCGTCCTGGTGTACTGGGCATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCGACGCGTGGCCCACCTGGGCTGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR TCA 90 bp AGCGACCATCACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGTGGGGCAGCGTGGGGTaGCCAAAGATCCTGGATGAG +
Preference number: 2 (lower is better)
Translates to: SDHHIPRQCELRVLPWALWGSVG*PKILDE
Trigger: CTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCA...CAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR TCA 90 bp CTGCTGCCCATCAGGACTCCAGGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGGATGTGGTTCCTGCATaGAGGGGCGGTTCCTGCTCG +
Preference number: 2 (lower is better)
Translates to: LLPIRTPGQAEDLVLVALDVVPA*RGGSCS
Trigger: CGAGCAGGAACCGCCCCTTCATGCAGGAACCACATC...CAGGGCCACCAAGACCAGATCTTCAGCCTGGCCTGGAGTCCTGATGGGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR TCA 90 bp CTATGGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCGAGAAGTCCAAGTCGGTaGCTAGGTCTGAATGGCAGC +
Preference number: 2 (lower is better)
Translates to: LWGSVAGTQPAVSGNRSSRSPSR*LGLNGS
Trigger: GCTGCCATTCAGACCTAGTCACCGACTTGGACTTCT...CGAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR TCA 90 bp AGGTGTGGTGAGGTTGAGCCCCTTGAGGTTGGTGATGTGGCTGTCTCGGTGCAGTGGGCCTGCGTGCTCTaGGAGGCCCGCGGCTTTGTT +
Preference number: 2 (lower is better)
Translates to: RCGEVEPLEVGDVAVSVQWACVL*EARGFV
Trigger: AACAAAGCCGCGGGCCTCTCAGAGCACGCAGGCCCA...CTGCACCGAGACAGCCACATCACCAACCTCAAGGGGCTCAACCTCACCACACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR TCA 90 bp TGGGTCCTCCCGGTTCCCCAGTTTTGCCACCATGGCATTCAGCAGCTCCTCCTTTTCCAGGTACTGCGCTaGGGATGGGGCCCGACGAGC +
Preference number: 2 (lower is better)
Translates to: WVLPVPQFCHHGIQQLLLFQVLR*GWGPTS
Trigger: GCTCGTCGGGCCCCATCCTCAGCGCAGTACCTGGAA...AAGGAGGAGCTGCTGAATGCCATGGTGGCAAAACTGGGGAACCGGGAGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR GCA 90 bp ACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCTGCTTGCAGAGGCACAATaGCCAGTACACCAGGACGGT +
Preference number: 2 (lower is better)
Translates to: TPGPVDPHTPILADSGQLLAEAQ*PVHQDG
Trigger: ACCGTCCTGGTGTACTGGGCATTGTGCCTCTGCAAG...CAGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp TTCCCGCACGTCGCACTCCGTCTTAGGCAGGAGGACGAGGCCCTTGTGGGGGTCTTGAGGCTGACCTTCTaGACCTGCTGGTTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: FPHVALRLRQEDEALVGVLRLTF*TCWLSP
Trigger: TGGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAA...GACCCCCACAAGGGCCTCGTCCTCCTGCCTAAGACGGAGTGCGACGTGCGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp TCTGCAGCGACCTCAAACTGGGGCTGGTCCCGATGCCACTGGTGCTGGAGAGTGACCCTCGCTTGCGTCTaGATCACCCACGGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: SAATSNWGWSRCHWCWRVTLACV*ITHGCL
Trigger: GAGACACCCGTGGGTGATGCAGACGCAAGCGAGGGT...CACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGTCGCTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR-3UTR CCA 90 bp CCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGTGGAGGCCCAGAGGATGTaGAAGTGCCCACGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: PKILDEANPGWDQPRSAVEAQRM*KCPREG
Trigger: GCCTTCCCGTGGGCACTTCCACATCCTCTGGGCCTC...CACTGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR CCA 90 bp GGAGGGGAAGAGAAACCCTCGCTTGCGTCTGCATCACCCACGGGTGTCTCCATCGAGGCCCAGAGGATGTaGAAGTGCCCACGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: GGEEKPSLASASPTGVSIEAQRM*KCPREG
Trigger: GCCTTCCCGTGGGCACTTCCACATCCTCTGGGCCTC...GATGGAGACACCCGTGGGTGATGCAGACGCAAGCGAGGGTTTCTCTTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CCA 90 bp GTGGGTCCTCCCGGTTCCCCAGTTTTGCCACCATGGCATTCAGCAGCTCCTCCTGAGGCCCAGAGGATGTaGAAGTGCCCACGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: VGPPGSPVLPPWHSAAPPEAQRM*KCPREG
Trigger: GCCTTCCCGTGGGCACTTCCACATCCTCTGGGCCTC...AGGAGGAGCTGCTGAATGCCATGGTGGCAAAACTGGGGAACCGGGAGGACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR CCA 90 bp CACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGGCCAGCTTGATTTGATGTaGTTCCTGCATGAAGGGGCG +
Preference number: 2 (lower is better)
Translates to: HQGSISAPDGALHQVPMGQLDLM*FLHEGA
Trigger: CGCCCCTTCATGCAGGAACCACATCAAATCAAGCTG...GCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CCA 90 bp AGGGAGGCCAGGGCGCTGGAGAAGAACCGCGTGTCCCACAGCTTCACTTCGCGCCGCTTGTCCTCTCCTTaGCCTTGCAGAGGCACAATG +
Preference number: 2 (lower is better)
Translates to: REARALEKNRVSHSFTSRRLSSP*PCRGTM
Trigger: CATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCG...GCGCGAAGTGAAGCTGTGGGACACGCGGTTCTTCTCCAGCGCCCTGGCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGAATGGCAGCCCAGGTaGGCCACGCGTCGCTTGTCC +
Preference number: 2 (lower is better)
Translates to: VTCAGAREVSSSLRMSREEWQPR*ATRRLS
Trigger: GGACAAGCGACGCGTGGCCCACCTGGGCTGCCATTC...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CCA 90 bp TCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCAAGCCGATGGGCACGATaGCTGTGTCGCTCAGCTGTA +
Preference number: 2 (lower is better)
Translates to: SSPATARRWGSKGSQARSSRWAR*LCRSAV
Trigger: TACAGCTGAGCGACACAGCCATCGTGCCCATCGGCT...TGATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CCA 90 bp GTGGGTCCTCCCGGTTCCCCAGTTTTGCCACCATGGCATTCAGCAGCTCCTCCTAGGACGAGGCCCTTGTaGGGGTCAGGCGACGTGAAG +
Preference number: 2 (lower is better)
Translates to: VGPPGSPVLPPWHSAAPPRTRPL*GSGDVK
Trigger: CTTCACGTCGCCTGACCCCCACAAGGGCCTCGTCCT...AGGAGGAGCTGCTGAATGCCATGGTGGCAAAACTGGGGAACCGGGAGGACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CAA 90 bp TCGGTGACTAGGTCTGAATGGCAGCCCAGGTGGGCCACGCGTCGCTaGTCCTCTCCTTGGCCTTGCAGAGGCACAATGCCCAGTACACCA +
Preference number: 2 (lower is better)
Translates to: SVTRSEWQPRWATRR*SSPWPCRGTMPSTP
Trigger: TGGTGTACTGGGCATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCGACGCGTGGCCCACCTGGGCTGCCATTCAGACCTAGTCACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR TCA 90 bp TGGGTCCTCCCGGTTCCCCAGTTTTGCCACCATGGCATTCAGCAGCTCCTCCTTCTGGTCCCAGGGCCCTaGGACTGGTGCTGCTCTAGA +
Preference number: 2 (lower is better)
Translates to: WVLPVPQFCHHGIQQLLLLVPGP*DWCCSR
Trigger: TCTAGAGCAGCACCAGTCTCAGGGCCCTGGGACCAG...AAGGAGGAGCTGCTGAATGCCATGGTGGCAAAACTGGGGAACCGGGAGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp GTGGGTCCTCCCGGTTCCCCAGTTTTGCCACCATGGCATTCAGCAGCTCCTCCTTGCAGGGGTGACATGTaGCGGGGCCAGAGAGGTATC +
Preference number: 2 (lower is better)
Translates to: VGPPGSPVLPPWHSAAPPCRGDM*RGQRGI
Trigger: GATACCTCTCTGGCCCCGGCACATGTCACCCCTGCA...AGGAGGAGCTGCTGAATGCCATGGTGGCAAAACTGGGGAACCGGGAGGACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR GCA 90 bp CCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGTGTGCAGGGGTGACATGTaGCGGGGCCAGAGAGGTATC +
Preference number: 2 (lower is better)
Translates to: PKILDEANPGWDQPRSAVCRGDM*RGQRGI
Trigger: GATACCTCTCTGGCCCCGGCACATGTCACCCCTGCA...CACTGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR GCA 90 bp CCAGACACCAGCAGACAGCGACCATCACATACCCAGACAATGCGAGCTCCGCGTTGTCCTTGCACGCCGTaGCCACCAGGGCTCCATCTC +
Preference number: 2 (lower is better)
Translates to: PDTSRQRPSHTQTMRAPRCPCTP*PPGLHL
Trigger: GAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGACA...ACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGCTGTCTGCTGGTGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp TCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCACCAGTAGACACAAGGTaGTCCCAGGTGCCCATCCAT +
Preference number: 2 (lower is better)
Translates to: SSPATARRWGSKGSQARSPVDTR*SQVPIH
Trigger: ATGGATGGGCACCTGGGAGCACCTTGTGTCTACTGG...TGATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp CCGCCGGCCAGGGCCTCAGCTTCATATAGGAGCAGCTGGCGCTCACTTTGGCTGTTGAGGCTGACCTTCTaGACCTGCTGGTTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: PPARASASYRSSWRSLWLLRLTF*TCWLSP
Trigger: TGGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAA...CAGCCAAAGTGAGCGCCAGCTGCTCCTATATGAAGCTGAGGCCCTGGCCGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp GCTATGGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCCTGACACAAGGTTTGTaGTCCCTGTGTTGTGTGGGT +
Preference number: 2 (lower is better)
Translates to: AMGVGGRHTAGSVREQVLLTQGL*SLCCVG
Trigger: ACCCACACAACACAGGGAGCACAAACCTTGTGTCAG...GAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571756.5
ENST00000633681.1
3UTR-3UTR CCA 90 bp AGCAGGCAAGATGGGGCAGCGTGGGGTGACCAAAGATCCTGGATGAGGCCAATCGAGGCCCAGAGGATGTaGAAGTGCCCACGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: SRQDGAAWGDQRSWMRPIEAQRM*KCPREG
Trigger: GCCTTCCCGTGGGCACTTCCACATCCTCTGGGCCTC...GATTGGCCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTGCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR CCA 90 bp ACACTGGGTCACTGGGCTCAGCGCCGGCTGCTGCGGGACCACCTCGTAACAGTATGTCAGCCGAGCCTGTaGCCAGGAGGAAGTCATCAA +
Preference number: 2 (lower is better)
Translates to: TLGHWAQRRLLRDHLVTVCQPSL*PGGSHQ
Trigger: TTGATGACTTCCTCCTGGCCACAGGCTCGGCTGACA...TACTGTTACGAGGTGGTCCCGCAGCAGCCGGCGCTGAGCCCAGTGACCCAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CCA 90 bp AAGGGTCCGCCGGCCAGGGCCTCAGCTTCATATAGGAGCAGCTGGCGCTCACTTCATCCTTGCAGACAGTaGCCAGCTGCTGCCCATCAG +
Preference number: 2 (lower is better)
Translates to: KGPPARASASYRSSWRSLHPCRQ*PAAAHQ
Trigger: CTGATGGGCAGCAGCTGGCCACTGTCTGCAAGGATG...AAGTGAGCGCCAGCTGCTCCTATATGAAGCTGAGGCCCTGGCCGGCGGACCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CAA 90 bp AGTGCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTaGAGGATGAGCCGTGAGGTGTGCACTAGGAAGTGGCAGCACAGG +
Preference number: 2 (lower is better)
Translates to: SAGVTCAGAREVSSS*RMSREVCTRKWQHR
Trigger: CCTGTGCTGCCACTTCCTAGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR TCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGTGGGGCAGCGTGGGGTaGCCAAAGATCCTGGATGAG +
Preference number: 2 (lower is better)
Translates to: VTCAGAREVSSSLRMSREWGSVG*PKILDE
Trigger: CTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCA...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR TCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGAGCCCCCAAGGCCCTTaGCCAGAACTGGAACAGCAG +
Preference number: 2 (lower is better)
Translates to: VTCAGAREVSSSLRMSRESPQGP*PELEQQ
Trigger: CTGCTGTTCCAGTTCTGGTCAAGGGCCTTGGGGGCT...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR TCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGGACCATCAGCTCTGTaGTGCCCCCTTCTCCTGGCT +
Preference number: 2 (lower is better)
Translates to: VTCAGAREVSSSLRMSREGPSAL*CPLLLA
Trigger: AGCCAGGAGAAGGGGGCATCACAGAGCTGATGGTCC...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR TCA 90 bp CAGAATGCCGTCAGAGGTGGGGTGGAACTGCAGTACCTCCACTGGGAGGTCCTCGCGGAAGAGCAGAGCTaGCATCGTTTCCAAGGCGCA +
Preference number: 2 (lower is better)
Translates to: QNAVRGGVELQYLHWEVLAEEQS*HRFQGA
Trigger: TGCGCCTTGGAAACGATGTCAGCTCTGCTCTTCCGC...GAGGACCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTCTGACGGCATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGTGCAGGGGTGACATGTaGCGGGGCCAGAGAGGTATC +
Preference number: 2 (lower is better)
Translates to: VTCAGAREVSSSLRMSRECRGDM*RGQRGI
Trigger: GATACCTCTCTGGCCCCGGCACATGTCACCCCTGCA...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR GCA 90 bp CCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGTGCAGAGGATGTGGAAGTaGCCACGGGAAGGCAGGAGT +
Preference number: 2 (lower is better)
Translates to: PKILDEANPGWDQPRSAVQRMWK*PREGRS
Trigger: ACTCCTGCCTTCCCGTGGGCACTTCCACATCCTCTG...CACTGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR GCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCAGAGGATGTGGAAGTaGCCACGGGAAGGCAGGAGT +
Preference number: 2 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSQRMWK*PREGRS
Trigger: ACTCCTGCCTTCCCGTGGGCACTTCCACATCCTCTG...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR GCA 90 bp GGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGATGAGCCGTGAGGTGTaGACTAGGAAGTGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: GDQRSWMRPIQAGTSPGQMSREV*TRKWQH
Trigger: GTGCTGCCACTTCCTAGTGCACACCTCACGGCTCAT...CTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR GCA 90 bp CCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGTGATGAGCCGTGAGGTGTaGACTAGGAAGTGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: PKILDEANPGWDQPRSAVMSREV*TRKWQH
Trigger: GTGCTGCCACTTCCTAGTGCACACCTCACGGCTCAT...CACTGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR GCA 90 bp GTGGGTCCTCCCGGTTCCCCAGTTTTGCCACCATGGCATTCAGCAGCTCCTCCTATGAGCCGTGAGGTGTaGACTAGGAAGTGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: VGPPGSPVLPPWHSAAPPMSREV*TRKWQH
Trigger: GTGCTGCCACTTCCTAGTGCACACCTCACGGCTCAT...AGGAGGAGCTGCTGAATGCCATGGTGGCAAAACTGGGGAACCGGGAGGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR GCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCATGAGCCGTGAGGTGTaGACTAGGAAGTGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSMSREV*TRKWQH
Trigger: GTGCTGCCACTTCCTAGTGCACACCTCACGGCTCAT...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR CCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGGTGAAAACAGTCCCTaGGAACTGCCAGAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: VTCAGAREVSSSLRMSREGENSP*ELPEAQ
Trigger: CTGGGCCTCTGGCAGTTCCCAGGGACTGTTTTCACC...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR CCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGCCCGCGGCTTTGTTCTaGGGTCAAAGATCCGCAGCT +
Preference number: 2 (lower is better)
Translates to: VTCAGAREVSSSLRMSREPAALF*GQRSAA
Trigger: AGCTGCGGATCTTTGACCCCAGAACAAAGCCGCGGG...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CAA 90 bp AGCTTGTTGGCACAGAAGCCGTCACTCTCACCAGGTGTGGTGAGGTaGAGCCCCTTGAGGTTGGTGATGTGGCTGTCTCGGTGCAGGACA +
Preference number: 2 (lower is better)
Translates to: SLLAQKPSLSPGVVR*SPLRLVMWLSRCRT
Trigger: TGTCCTGCACCGAGACAGCCACATCACCAACCTCAAGGGGCTCAACCTCACCACACCTGGTGAGAGTGACGGCTTCTGTGCCAACAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR-3UTR TCA 90 bp GGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGAGACAGCAGAGGTaGAAACAGTCCCTGGGAACT +
Preference number: 2 (lower is better)
Translates to: GDQRSWMRPIQAGTSPGQQRQQR*KQSLGT
Trigger: AGTTCCCAGGGACTGTTTTCACCTCTGCTGTCTCTG...CTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR TCA 90 bp CCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGTGCAGAGACAGCAGAGGTaGAAACAGTCCCTGGGAACT +
Preference number: 2 (lower is better)
Translates to: PKILDEANPGWDQPRSAVQRQQR*KQSLGT
Trigger: AGTTCCCAGGGACTGTTTTCACCTCTGCTGTCTCTG...CACTGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR TCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGACCAAAGATCCTGGATaGGGCCAATCCAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: VTCAGAREVSSSLRMSRETKDPG*GQSRLG
Trigger: TCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGT...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR TCA 90 bp AACAGTGAGGTCATAGGAGGACGAGGCCAGCACATTGGCTGCCAGTGGGTGGAAGCGGAAGAGCAGAGCTaGCATCGTTTCCAAGGCGCA +
Preference number: 2 (lower is better)
Translates to: NSEVIGGRGQHIGCQWVEAEEQS*HRFQGA
Trigger: TGCGCCTTGGAAACGATGTCAGCTCTGCTCTTCCGC...TTCCACCCACTGGCAGCCAATGTGCTGGCCTCGTCCTCCTATGACCTCACTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp AGGTGTGGTGAGGTTGAGCCCCTTGAGGTTGGTGATGTGGCTGTCTCGGTGCAGATGAGCCGTGAGGTGTaGACTAGGAAGTGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: RCGEVEPLEVGDVAVSVQMSREV*TRKWQH
Trigger: GTGCTGCCACTTCCTAGTGCACACCTCACGGCTCAT...CTGCACCGAGACAGCCACATCACCAACCTCAAGGGGCTCAACCTCACCACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CCA 90 bp GGAGGGGAAGAGAAACCCTCGCTTGCGTCTGCATCACCCACGGGTGTCTCCATCGGTGACCAAAGATCCTaGATGAGGCCAATCCAGGCT +
Preference number: 2 (lower is better)
Translates to: GGEEKPSLASASPTGVSIGDQRS*MRPIQA
Trigger: AGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC...GATGGAGACACCCGTGGGTGATGCAGACGCAAGCGAGGGTTTCTCTTCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGCCCTTGACCAGAACTaGAACAGCAGGCAAGATGGG +
Preference number: 2 (lower is better)
Translates to: VTCAGAREVSSSLRMSREALDQN*NSRQDG
Trigger: CCCATCTTGCCTGCTGTTCCAGTTCTGGTCAAGGGC...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR CCA 90 bp GATGTGGCTGTCTCGGTGCAGGACAGTGCCCTGAGCATGGCGGAACTTGGAACTTCCTGGCTACAAACCTaGGAAGTAGGGCAGCTGGTC +
Preference number: 2 (lower is better)
Translates to: DVAVSVQDSALSMAELGTSWLQT*EVGQLV
Trigger: GACCAGCTGCCCTACTTCCCAGGTTTGTAGCCAGGA...AGTTCCAAGTTCCGCCATGCTCAGGGCACTGTCCTGCACCGAGACAGCCACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR TCA 90 bp AAGGGTCCGCCGGCCAGGGCCTCAGCTTCATATAGGAGCAGCTGGCGCTCACTTCTGCTCGAATGTCACTaGTCCAGGAAAATAACACGG +
Preference number: 2 (lower is better)
Translates to: KGPPARASASYRSSWRSLLLECH*SRKITR
Trigger: CCGTGTTATTTTCCTGGATCAGTGACATTCGAGCAG...AAGTGAGCGCCAGCTGCTCCTATATGAAGCTGAGGCCCTGGCCGGCGGACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR TCA 90 bp TCAAAGCCAGACACCAGCAGACAGCGACCATCACATACCCAGACAATGCGAGCTGATGTGGTTCCTGCATaGAGGGGCGGTTCCTGCTCG +
Preference number: 2 (lower is better)
Translates to: SKPDTSRQRPSHTQTMRADVVPA*RGGSCS
Trigger: CGAGCAGGAACCGCCCCTTCATGCAGGAACCACATC...AGCTCGCATTGTCTGGGTATGTGATGGTCGCTGTCTGCTGGTGTCTGGCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR TCA 90 bp GGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGCAGCTTCAGCCGATCAGCTCCGATCAAGCTGCAGCTTaGTTTGATGTGGTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: GQAEDLVLVALQLQPISSDQAAA*FDVVPA
Trigger: TGCAGGAACCACATCAAATCAAGCTGCAGCTTGATC...GGAGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp AGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTAGGAAGTGGTGCAGGGGTGACATGTaGCGGGGCCAGAGAGGTATC +
Preference number: 2 (lower is better)
Translates to: REVSSSLRMSREVCTRKWCRGDM*RGQRGI
Trigger: GATACCTCTCTGGCCCCGGCACATGTCACCCCTGCA...CCACTTCCTAGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR TCA 90 bp ACGATGGCTGTGTCGCTCAGCTGTAGGACGCGGAGTACCTCGCAGCTCATGACGCTGCTCGAATGTCACTaGTCCAGGAAAATAACACGG +
Preference number: 2 (lower is better)
Translates to: TMAVSLSCRTRSTSQLMTLLECH*SRKITR
Trigger: CCGTGTTATTTTCCTGGATCAGTGACATTCGAGCAG...CGTCATGAGCTGCGAGGTACTCCGCGTCCTACAGCTGAGCGACACAGCCATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR TCA 90 bp GATCTGGTCTTGGTGGCCCTGCAGCTTCAGCCGATCAGCTCCAGCCTGAAGGTCAGCTGCAGCTTGATTTaGTGTGGTTCCTGCATGAAG +
Preference number: 2 (lower is better)
Translates to: DLVLVALQLQPISSSLKVSCSLI*CGSCMK
Trigger: CTTCATGCAGGAACCACATCAAATCAAGCTGCAGCT...GACCTTCAGGCTGGAGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR GCA 90 bp AGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTAGGAAGTGGCAGAGGATGTGGAAGTaGCCACGGGAAGGCAGGAGT +
Preference number: 2 (lower is better)
Translates to: REVSSSLRMSREVCTRKWQRMWK*PREGRS
Trigger: ACTCCTGCCTTCCCGTGGGCACTTCCACATCCTCTG...CCACTTCCTAGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR CCA 90 bp AGCAGGCAAGATGGGGCAGCGTGGGGTGACCAAAGATCCTGGATGAGGCCAATCCAGCTTGATTTGATGTaGTTCCTGCATGAAGGGGCG +
Preference number: 2 (lower is better)
Translates to: SRQDGAAWGDQRSWMRPIQLDLM*FLHEGA
Trigger: CGCCCCTTCATGCAGGAACCACATCAAATCAAGCTG...GATTGGCCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CAA 90 bp ACACCAGGACGGTCGGAGTTGAAGGCGATCAAGCTGCAGCTTGATTaGATGTGGTTCCTGCATGAAGGGGCGGTTCCTGCTCGAATGTCA +
Preference number: 2 (lower is better)
Translates to: TPGRSELKAIKLQLD*MWFLHEGAVPARMS
Trigger: TGACATTCGAGCAGGAACCGCCCCTTCATGCAGGAACCACATCAAATCAAGCTGCAGCTTGATCGCCTTCAACTCCGACCGTCCTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR TCA 90 bp AGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTAGGAAGTGGCAGAGACAGCAGAGGTaGAAACAGTCCCTGGGAACT +
Preference number: 2 (lower is better)
Translates to: REVSSSLRMSREVCTRKWQRQQR*KQSLGT
Trigger: AGTTCCCAGGGACTGTTTTCACCTCTGCTGTCTCTG...CCACTTCCTAGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR TCA 72 bp CGCTCAGCTGTAGGACGCGGAGTACCTCGCAGCTCATaGCGGCCAGCGCCTGCCGGGGCACAAGGGCAGCCC +
Preference number: 3 (lower is better)
Translates to: RSAVGRGVPRSS*RPAPAGAQGQP
Trigger: GGGCTGCCCTTGTGCCCCGGCAGGCGCTGGCCGTCATGAGCTGCGAGGTACTCCGCGTCCTACAGCTGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR TCA 72 bp CGGGGCAGCCGGAAGGCCACAGGCTCCAGGGAGGACTaGCGCAGCCGCAGGCACCGCATCAGCTCCACTTCC +
Preference number: 3 (lower is better)
Translates to: RGSRKATGSRED*RSRRHRISSTS
Trigger: GGAAGTGGAGCTGATGCGGTGCCTGCGGCTGCGTCAGTCCTCCCTGGAGCCTGTGGCCTTCCGGCTGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR GCA 72 bp CCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTaGACCAGGTCCCCATGGGCTGCCAGCTCTGTCAGG +
Preference number: 3 (lower is better)
Translates to: PTRAPSRLQTAL*TRSPWAASSVR
Trigger: CCTGACAGAGCTGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR CCA 72 bp TCCGCAGGGGGCACCAGACAGGAAGTGAAGCTCGGGTaGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGC +
Preference number: 3 (lower is better)
Translates to: SAGGTRQEVKLG*GRQAGLRLTFC
Trigger: GCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTGTCTGGTGCCCCCTGCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR-3UTR CAA 90 bp CCGCCGGCCAGGGCCTCAGCTTCATATAGGAGCAGCTGGCGCTCACTTTGGCTGGGCCGGCAGGCGGGGTaGAGGCTGACCTTCTGCACC +
Preference number: 3 (lower is better)
Translates to: PPARASASYRSSWRSLWLGRQAG*RLTFCT
Trigger: GGTGCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCC...CAGCCAAAGTGAGCGCCAGCTGCTCCTATATGAAGCTGAGGCCCTGGCCGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR GCA 72 bp CCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTaGACCAGGTCCCCATGGGCTGCCAGCTCAGAATGC +
Preference number: 3 (lower is better)
Translates to: PTRAPSRLQTAL*TRSPWAASSEC
Trigger: GCATTCTGAGCTGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR GCA 72 bp GGCTCTGCAGCGACCTCAAACTGGGGCTGGTCCCGATaGCACTGGTGCTGGAGAGTGAGGGCCCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: GSAATSNWGWSR*HWCWRVRAPGW
Trigger: CCAGCCTGGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGTCGCTGCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR CCA 72 bp GGCCCAGCAGGCTCTGCAGCGACCTCAAACTGGGGCTaGTCCCGATGCCACTGGTGCTGGAGAGTGAGGGCC +
Preference number: 3 (lower is better)
Translates to: GPAGSAATSNWG*SRCHWCWRVRA
Trigger: GGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGTCGCTGCAGAGCCTGCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR CCA 72 bp AGGCCAGATCAGTCACAGCTGCCCCATTCTGCAGCGTaGGCAGTGCCGTGTCGGGCAGGCGGCCAGGCTTCC +
Preference number: 3 (lower is better)
Translates to: RPDQSQLPHSAA*AVPCRAGGQAS
Trigger: GGAAGCCTGGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
3UTR-3UTR CAA 90 bp TGCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCACCAGGACGGTCGGAGTaGAAGGCGATCAAGCTGCAG +
Preference number: 3 (lower is better)
Translates to: CTPCPPGLHLGSRRRSAPPGRSE*KAIKLQ
Trigger: CTGCAGCTTGATCGCCTTCAACTCCGACCGTCCTGG...TGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CAA 90 bp CACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCTTGGGCCACGCGTCGCTaGTCCTCTCCTTGGCCTTGC +
Preference number: 3 (lower is better)
Translates to: HSGACRPAHAHPCRQWPAWATRR*SSPWPC
Trigger: GCAAGGCCAAGGAGAGGACAAGCGACGCGTGGCCCA...AGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CAA 90 bp TCTGCAGCGACCTCAAACTGGGGCTGGTCCCGATGCCACTGGTGCTGGAGAGTGGGCCGGCAGGCGGGGTaGAGGCTGACCTTCTGCACC +
Preference number: 3 (lower is better)
Translates to: SAATSNWGWSRCHWCWRVGRQAG*RLTFCT
Trigger: GGTGCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCC...CACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGTCGCTGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR GCA 72 bp GCTCCCAGGTGCCCATCCATGCCAGCCGGCTATCCCTaGTGTTCTCATGGGCCTGCGTGCTCTGAGAGGCCC +
Preference number: 3 (lower is better)
Translates to: APRCPSMPAGYP*CSHGPACSERP
Trigger: GGGCCTCTCAGAGCACGCAGGCCCATGAGAACAGCAGGGATAGCCGGCTGGCATGGATGGGCACCTGGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR GCA 72 bp GCGCTCACCAGAATGCCGTCAGAGGTGGGGTGGAACTaGAGTACCTCCACTGGGAGGTCCTCGGGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: ALTRMPSEVGWN*STSTGRSSGPS
Trigger: GCTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTCTGACGGCATTCTGGTGAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR CCA 72 bp TCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATaGGCTGCCAGCTCAGAATGCCGTCAGAGGTGGGGT +
Preference number: 3 (lower is better)
Translates to: SRLQTALCTRSP*AASSECRQRWG
Trigger: ACCCCACCTCTGACGGCATTCTGAGCTGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CCA 72 bp GCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTaGCCAGCTGCTGCCCATCAGGACTCCAGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: ACRPAHAHPCRQ*PAAAHQDSRPG
Trigger: GCCTGGCCTGGAGTCCTGATGGGCAGCAGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
3UTR-3UTR CAA 90 bp GGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGAGCTGAAGATCTGGTCTaGGTGGCCCTGCAGCTTCAG +
Preference number: 3 (lower is better)
Translates to: GAQGHSGACRPAHAHPCRAEDLV*VALQLQ
Trigger: CTGAAGCTGCAGGGCCACCAAGACCAGATCTTCAGC...TCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
3UTR TCA 72 bp GCAGAGGCACGAGACACCCAAGCGAGGTGTCCAAGGTaGGGGAGGCCAGGGCGCTGGAGAAGAACCGCGTGT +
Preference number: 3 (lower is better)
Translates to: AEARDTQARCPR*GRPGRWRRTAC
Trigger: ACACGCGGTTCTTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTGTCTCGTGCCTCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR GCA 72 bp TGCCAGCTCAGAATGCCGTCAGAGGTGGGGTGGAACTaGAGTACCTCCACTGGGAGGTCCTCGGGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: CQLRMPSEVGWN*STSTGRSSGPS
Trigger: GCTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTCTGACGGCATTCTGAGCTGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CCA 72 bp CCTGCTGCGCTCACCAGAATGCCGTCAGAGGTGGGGTaGAACTGCAGTACCTCCACTGGGAGGTCCTCGGGG +
Preference number: 3 (lower is better)
Translates to: PAALTRMPSEVG*NCSTSTGRSSG
Trigger: CCCCGAGGACCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR CCA 72 bp GGGGCTGCTGCTTGGCTGCGTCCCAGACCTTCACAGTaGTGCCTGCTGCGCTCACCAGAATGCCGTCAGAGG +
Preference number: 3 (lower is better)
Translates to: GAAAWLRPRPSQ*CLLRSPECRQR
Trigger: CCTCTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR-3UTR CAA 90 bp GTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCACCTGCTGGTTGTCCCCGAGGTATCTTCCAGCTaGAGGATGAGCCGTGAGGTG +
Preference number: 3 (lower is better)
Translates to: VGPAGGVEADLLHLLVVPEVSSS*RMSREV
Trigger: CACCTCACGGCTCATCCTCAAGCTGGAAGATACCTC...GGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CAA 90 bp GGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGGCTGCCATCGCTTGTCCTCTCCTaGGCCTTGCAGAGGCACAAT +
Preference number: 3 (lower is better)
Translates to: GLHLGSRRRSAPGPHGLPSLVLS*ALQRHN
Trigger: ATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCGA...TGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CAA 90 bp TCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCAAAGATCCGCAGCTGCTaGTCCTTGCACGCCGTGCCC +
Preference number: 3 (lower is better)
Translates to: SSPATARRWGSKGSQARSKIRSC*SLHAVP
Trigger: GGGCACGGCGTGCAAGGACAAGCAGCTGCGGATCTT...TGATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CAA 90 bp TTCCCGCACGTCGCACTCCGTCTTAGGCAGGAGGACGAGGCCCTTGTGGGGGTCGAGAGGCCCGCGGCTTaGTTCTGGGGTCAAAGATCC +
Preference number: 3 (lower is better)
Translates to: FPHVALRLRQEDEALVGVERPAA*FWGQRS
Trigger: GGATCTTTGACCCCAGAACAAAGCCGCGGGCCTCTC...GACCCCCACAAGGGCCTCGTCCTCCTGCCTAAGACGGAGTGCGACGTGCGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR GCA 72 bp CCCTGGGAACTGCCAGAGGCCCAGAGGATGTGGAAGTaGCCACGGGAAGGCAGGAGTGCAGGGGTGACATGT +
Preference number: 3 (lower is better)
Translates to: PWELPEAQRMWK*PREGRSAGVTC
Trigger: ACATGTCACCCCTGCACTCCTGCCTTCCCGTGGGCACTTCCACATCCTCTGGGCCTCTGGCAGTTCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
3UTR GCA 72 bp AGGTGGGCCACGCGTCGCTTGTCCTCTCCTTGGCCTTaGAGAGGCACAATGCCCAGTACACCAGGACGGTCG +
Preference number: 3 (lower is better)
Translates to: RWATRRLSSPWP*RGTMPSTPGRS
Trigger: CGACCGTCCTGGTGTACTGGGCATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCGACGCGTGGCCCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR GCA 72 bp CTGCTTGGCTGCGTCCCAGACCTTCACAGTGGTGCCTaGTGCGCTCACCAGAATGCCGTCAGAGGTGGGGTG +
Preference number: 3 (lower is better)
Translates to: LLGCVPDLHSGA*CAHQNAVRGGV
Trigger: CACCCCACCTCTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGGACGCAGCCAAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR GCA 72 bp GCTGCTGCTTGGCTGCGTCCCAGACCTTCACAGTGGTaGCTGCTGCGCTCACCAGAATGCCGTCAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: AAAWLRPRPSQW*LLRSPECRQRW
Trigger: CCACCTCTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR CCA 72 bp CAGCCCAGGTGGGCCACGCGTCGCTTGTCCTCTCCTTaGCCTTGCAGAGGCACAATGCCCAGTACACCAGGA +
Preference number: 3 (lower is better)
Translates to: QPRWATRRLSSP*PCRGTMPSTPG
Trigger: TCCTGGTGTACTGGGCATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCGACGCGTGGCCCACCTGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CCA 72 bp ATGGGCTGCCAGCTCAGAATGCCGTCAGAGGTGGGGTaGAACTGCAGTACCTCCACTGGGAGGTCCTCGGGG +
Preference number: 3 (lower is better)
Translates to: MGCQLRMPSEVG*NCSTSTGRSSG
Trigger: CCCCGAGGACCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTCTGACGGCATTCTGAGCTGGCAGCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CCA 72 bp GGGCCTGCGTGCTCTGAGAGGCCCGCGGCTTTGTTCTaGGGTCAAAGATCCGCAGCTGCTTGTCCTTGCACG +
Preference number: 3 (lower is better)
Translates to: GPACSERPAALF*GQRSAAACPCT
Trigger: CGTGCAAGGACAAGCAGCTGCGGATCTTTGACCCCAGAACAAAGCCGCGGGCCTCTCAGAGCACGCAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CCA 72 bp CAGCCTTGCGGGGCACATGGTAGCCGATGGGCACGATaGCTGTGTCGCTCAGCTGTAGGACGCGGAGTACCT +
Preference number: 3 (lower is better)
Translates to: QPCGAHGSRWAR*LCRSAVGRGVP
Trigger: AGGTACTCCGCGTCCTACAGCTGAGCGACACAGCCATCGTGCCCATCGGCTACCATGTGCCCCGCAAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR CCA 72 bp GGAACTCCACAGCCTTGCGGGGCACATGGTAGCCGATaGGCACGATGGCTGTGTCGCTCAGCTGTAGGACGC +
Preference number: 3 (lower is better)
Translates to: GTPQPCGAHGSR*ARWLCRSAVGR
Trigger: GCGTCCTACAGCTGAGCGACACAGCCATCGTGCCCATCGGCTACCATGTGCCCCGCAAGGCTGTGGAGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR-3UTR CAA 90 bp ACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGGCCTTCCTGACGGCCACACGCAGCTaGTTGGCACAGAAGCCGTCA +
Preference number: 3 (lower is better)
Translates to: TYPDNASSASSLGPWAFLTATRS*LAQKPS
Trigger: TGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGT...CAGGAAGGCCCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CAA 90 bp TTCCCGCACGTCGCACTCCGTCTTAGGCAGGAGGACGAGGCCCTTGTGGGGGTCGGCGACGTGAAGCTGTaGCACTCCAGGAAGAAAGGG +
Preference number: 3 (lower is better)
Translates to: FPHVALRLRQEDEALVGVGDVKL*HSRKKG
Trigger: CCCTTTCTTCCTGGAGTGCAACAGCTTCACGTCGCC...GACCCCCACAAGGGCCTCGTCCTCCTGCCTAAGACGGAGTGCGACGTGCGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CAA 90 bp ACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCACCAGGTGTGGTGAAGATCCGCAGCTGCTaGTCCTTGCACGCCGTGCCC +
Preference number: 3 (lower is better)
Translates to: TATRSLLAQKPSLSPGVVKIRSC*SLHAVP
Trigger: GGGCACGGCGTGCAAGGACAAGCAGCTGCGGATCTT...CACCACACCTGGTGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR TCA 72 bp AAGATGGGGCAGCGTGGGGTGACCAAAGATCCTGGATaGGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGC +
Preference number: 3 (lower is better)
Translates to: KMGQRGVTKDPG*GQSRLGPAQVS
Trigger: GCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR TCA 72 bp TTGGTGATGTGGCTGTCTCGGTGCAGGACAGTGCCCTaGGCATGGCGGAACTTGGAACTGGGGCCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: LVMWLSRCRTVP*AWRNLELGPSR
Trigger: CCTGCTGGGCCCCAGTTCCAAGTTCCGCCATGCTCAGGGCACTGTCCTGCACCGAGACAGCCACATCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
3UTR GCA 72 bp CTTGGCTGCGTCCCAGACCTTCACAGTGGTGCCTGCTaGGCTCACCAGAATGCCGTCAGAGGTGGGGTGGAA +
Preference number: 3 (lower is better)
Translates to: LGCVPDLHSGAC*AHQNAVRGGVE
Trigger: TTCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGGACGCAGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR CCA 72 bp TCCCCATGGGCTGCCAGCTCAGAATGCCGTCAGAGGTaGGGTGGAACTGCAGTACCTCCACTGGGAGGTCCT +
Preference number: 3 (lower is better)
Translates to: SPWAASSECRQR*GGTAVPPLGGP
Trigger: AGGACCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTCTGACGGCATTCTGAGCTGGCAGCCCATGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CCA 72 bp CCGCCGGCCAGGGCCTCAGCTTCATATAGGAGCAGCTaGCGCTCACTTTGGCTGTCAAAGCCAGACACCAGC +
Preference number: 3 (lower is better)
Translates to: PPARASASYRSS*RSLWLSKPDTS
Trigger: GCTGGTGTCTGGCTTTGACAGCCAAAGTGAGCGCCAGCTGCTCCTATATGAAGCTGAGGCCCTGGCCGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CCA 72 bp TGGTGCCTGCTGCGCTCACCAGAATGCCGTCAGAGGTaGGGTGGAACTGCAGTACCTCCACTGGGAGGTCCT +
Preference number: 3 (lower is better)
Translates to: WCLLRSPECRQR*GGTAVPPLGGP
Trigger: AGGACCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAGCAGGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR-3UTR CAA 90 bp CGCAGGCTAGTCCCACTCGTCCTCGTCCACGCCTTCAAAGGAGTCCTGGGGGAGGAGGTATCTTCCAGCTaGAGGATGAGCCGTGAGGTG +
Preference number: 3 (lower is better)
Translates to: RRLVPLVLVHAFKGVLGEEVSSS*RMSREV
Trigger: CACCTCACGGCTCATCCTCAAGCTGGAAGATACCTC...CTCCCCCAGGACTCCTTTGAAGGCGTGGACGAGGACGAGTGGGACTAGCCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR CAA 90 bp ACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCACCAGGTGTGGTGGAGAGGCCCGCGGCTTaGTTCTGGGGTCAAAGATCC +
Preference number: 3 (lower is better)
Translates to: TATRSLLAQKPSLSPGVVERPAA*FWGQRS
Trigger: GGATCTTTGACCCCAGAACAAAGCCGCGGGCCTCTC...CACCACACCTGGTGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR GCA 72 bp CCAGAGACAGCAGAGGTGAAAACAGTCCCTGGGAACTaGCAGAGGCCCAGAGGATGTGGAAGTGCCCACGGG +
Preference number: 3 (lower is better)
Translates to: PETAEVKTVPGN*QRPRGCGSAHG
Trigger: CCCGTGGGCACTTCCACATCCTCTGGGCCTCTGGCAGTTCCCAGGGACTGTTTTCACCTCTGCTGTCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR TCA 72 bp GAACTGGAACAGCAGGCAAGATGGGGCAGCGTGGGGTaGCCAAAGATCCTGGATGAGGCCAATCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: ELEQQARWGSVG*PKILDEANPGW
Trigger: CCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTGCCTGCTGTTCCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR TCA 72 bp TGGCTGGGAGGATCACAGGACAGGCGGGCAGGAGCCTaGCACAAGGTTTGTGCTCCCTGTGTTGTGTGGGTA +
Preference number: 3 (lower is better)
Translates to: WLGGSQDRRAGA*HKVCAPCVVWV
Trigger: TACCCACACAACACAGGGAGCACAAACCTTGTGTCAGGCTCCTGCCCGCCTGTCCTGTGATCCTCCCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571756.5
ENST00000633681.1
3UTR GCA 72 bp AGTGAGGTCATAGGAGGACGAGGCCAGCACATTGGCTaGCAGTGGGTGGAAGCGCAGGGAGCAGATCTTCTC +
Preference number: 3 (lower is better)
Translates to: SEVIGGRGQHIG*QWVEAQGADLL
Trigger: GAGAAGATCTGCTCCCTGCGCTTCCACCCACTGGCAGCCAATGTGCTGGCCTCGTCCTCCTATGACCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
3UTR GCA 72 bp AGACCTTCACAGTGGTGCCTGCTGCGCTCACCAGAATaGCGTCAGAGGTGGGGTGGAACTGCAGTACCTCCA +
Preference number: 3 (lower is better)
Translates to: RPSQWCLLRSPE*RQRWGGTAVPP
Trigger: TGGAGGTACTGCAGTTCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
3UTR CCA 72 bp GCTGACCCCAGAGACAGCAGAGGTGAAAACAGTCCCTaGGAACTGCCAGAGGCCCAGAGGATGTGGAAGTGC +
Preference number: 3 (lower is better)
Translates to: ADPRDSRGENSP*ELPEAQRMWKC
Trigger: GCACTTCCACATCCTCTGGGCCTCTGGCAGTTCCCAGGGACTGTTTTCACCTCTGCTGTCTCTGGGGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR CCA 72 bp TCCCAGATCACAGCCGTGTCTGGGAACACGTCATCCTaGAAGAACTCTTTCCGGACTCGGGGCAGCCGGAAG +
Preference number: 3 (lower is better)
Translates to: SQITAVSGNTSS*KNSFRTRGSRK
Trigger: CTTCCGGCTGCCCCGAGTCCGGAAAGAGTTCTTCCAGGATGACGTGTTCCCAGACACGGCTGTGATCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CAA 90 bp CCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGTGGAGGTATCTTCCAGCTaGAGGATGAGCCGTGAGGTG +
Preference number: 3 (lower is better)
Translates to: PKILDEANPGWDQPRSAVEVSSS*RMSREV
Trigger: CACCTCACGGCTCATCCTCAAGCTGGAAGATACCTC...CACTGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR CAA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGCAGCTGGCGCTCACTTaGGCTGTCAAAGCCAGACAC +
Preference number: 3 (lower is better)
Translates to: VTCAGAREVSSSLRMSREQLALT*AVKARH
Trigger: GTGTCTGGCTTTGACAGCCAAAGTGAGCGCCAGCTG...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CAA 90 bp TGGAACAGCAGGCAAGATGGGGCAGCGTGGGGTGACCAAAGATCCTGGATGAGGGAGGTATCTTCCAGCTaGAGGATGAGCCGTGAGGTG +
Preference number: 3 (lower is better)
Translates to: WNSRQDGAAWGDQRSWMREVSSS*RMSREV
Trigger: CACCTCACGGCTCATCCTCAAGCTGGAAGATACCTC...CCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTGCCTGCTGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
3UTR-3UTR CAA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGAGGTATCTTCCAGCTaGAGGATGAGCCGTGAGGTG +
Preference number: 3 (lower is better)
Translates to: VTCAGAREVSSSLRMSREEVSSS*RMSREV
Trigger: CACCTCACGGCTCATCCTCAAGCTGGAAGATACCTC...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
3UTR-3UTR CAA 90 bp CCAGACACCAGCAGACAGCGACCATCACATACCCAGACAATGCGAGCTCCGCGTTCGCTTGTCCTCTCCTaGGCCTTGCAGAGGCACAAT +
Preference number: 3 (lower is better)
Translates to: PDTSRQRPSHTQTMRAPRSLVLS*ALQRHN
Trigger: ATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCGA...ACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGCTGTCTGCTGGTGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CCA 72 bp GTCGCCAGAGTTTTACCGTCCTGTCAGCCGAGCCTGTaGCCAGGAGGAAGTCATCAAAGGGCGAGAAGTCCA +
Preference number: 3 (lower is better)
Translates to: VARVLPSCQPSL*PGGSHQRARSP
Trigger: TGGACTTCTCGCCCTTTGATGACTTCCTCCTGGCCACAGGCTCGGCTGACAGGACGGTAAAACTCTGGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000572153.5
ENST00000632167.1
ENST00000633889.1
3UTR-3UTR CAA 90 bp GGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGCAGCTTCAGCCGATCAGCTCCAAGCTGCAGCTTGATTaGATGTGGTTCCTGCATGAA +
Preference number: 3 (lower is better)
Translates to: GQAEDLVLVALQLQPISSKLQLD*MWFLHE
Trigger: TTCATGCAGGAACCACATCAAATCAAGCTGCAGCTT...GGAGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR-3UTR CAA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGCAGCTCCTCCTTCTTTaGCTGGTCAGACTTTTCTTC +
Preference number: 3 (lower is better)
Translates to: VTCAGAREVSSSLRMSREQLLLL*LVRLFF
Trigger: GAAGAAAAGTCTGACCAGCAAAAGAAGGAGGAGCTG...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
3UTR CCA 72 bp GAGTTGAAGGCGATCAAGCTGCAGCTTGATTTGATGTaGTTCCTGCATGAAGGGGCGGTTCCTGCTCGAATG +
Preference number: 3 (lower is better)
Translates to: ELKAIKLQLDLM*FLHEGAVPARM
Trigger: CATTCGAGCAGGAACCGCCCCTTCATGCAGGAACCACATCAAATCAAGCTGCAGCTTGATCGCCTTCAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp TGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGCACCACCCCGGGTGCTaGGGGCAGGGCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CGYPPQSDPGVLTSHSEAHHPGC*GQGLAR
Trigger: CCTGGCCAGGCCCTGCCCTCAGCACCCGGGGTGGTG...CGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR TCA 90 bp CCCTGGGCCTTCCTGCAGGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACGCACCAGACAGGAAGTaGAGCTCGGGTGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: PWAFLQGLRATPGPVDPHAPDRK*SSGGAG
Trigger: GCCGGCCCCACCCGAGCTTCACTTCCTGTCTGGTGC...GTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGCAGGAAGGCCCAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp CTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCGGCTCCAGGGAGGACTaGCGCAGCCGCAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: LASSPATARRWGSKGSQAGSRED*RSRRHR
Trigger: GCGGTGCCTGCGGCTGCGTCAGTCCTCCCTGGAGCC...GGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCAACCGCGACTCCCGCTaGCTCGGCCCCACCCGGGAC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSNRDSR*LGPTRD
Trigger: GTCCCGGGTGGGGCCGAGGCAGCGGGAGTCGCGGTT...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp CTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAACCGCGACTCCCGCTaGCTCGGCCCCACCCGGGAC +
Preference number: 4 (lower is better)
Translates to: LASSPATARRWGSKGSQANRDSR*LGPTRD
Trigger: GTCCCGGGTGGGGCCGAGGCAGCGGGAGTCGCGGTT...GGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR CCA 90 bp CCCTGGGCCTTCCTGCAGGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACGGAGTCCTGGGGGAGTaGGTCCTCCCGGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PWAFLQGLRATPGPVDPHGVLGE*VLPVPQ
Trigger: CTGGGGAACCGGGAGGACCCACTCCCCCAGGACTCC...GTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGCAGGAAGGCCCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp TGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGGCGAGGTGTCCAAGGTaGGGGAGGCCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: CGYPPQSDPGVLTSHSEAARCPR*GRPGRW
Trigger: CCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGC...CGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp GTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCACCTGCTGGTTGTCCCCGTACCTCGCAGCTCATaGCGGCCAGCGCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: VGPAGGVEADLLHLLVVPVPRSS*RPAPAG
Trigger: CCCGGCAGGCGCTGGCCGTCATGAGCTGCGAGGTAC...GGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp GCTATGGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCCCTGTCCCCCGCTGCTaGGCAGCGGCACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: AMGVGGRHTAGSVREQVLPVPRC*AAARPH
Trigger: GTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGG...GAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCATGACGGCCAGCGCCTaGCGGGGCACAAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSMTASA*RGTRAA
Trigger: GGCTGCCCTTGTGCCCCGGCAGGCGCTGGCCGTCAT...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp CCTTGCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCAATGACGGCCAGCGCCTaGCGGGGCACAAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PCTPCPPGLHLGSRRRSAMTASA*RGTRAA
Trigger: GGCTGCCCTTGTGCCCCGGCAGGCGCTGGCCGTCAT...TGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGCAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp AGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACACTGCAGCGTGGGCAGTaGCGTGTCGGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RPSAGTRHSRILASSPATLQRGQ*RVGQAA
Trigger: GGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAG...TGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCGGCCCTGGGCCTTCCTaGAGGGGCTCAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSGPGPS*RGSGPL
Trigger: GAGTGGCCCTGAGCCCCTGCAGGAAGGCCCAGGGCC...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp GTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCACCTGCTGGTTGTCCCCGGCCCTGGGCCTTCCTaGAGGGGCTCAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: VGPAGGVEADLLHLLVVPGPGPS*RGSGPL
Trigger: GAGTGGCCCTGAGCCCCTGCAGGAAGGCCCAGGGCC...GGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGAGGCCCTGGGCCTTCCTaGAGGGGCTCAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: GAQGHSGACRPAHAHPCRGPGPS*RGSGPL
Trigger: GAGTGGCCCTGAGCCCCTGCAGGAAGGCCCAGGGCC...TCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGCACGGGTGTCGCCCTTaGCGGTCAGGAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: ARRAHQGSISAPDGALHQHGCRP*RSGAPG
Trigger: GCCTGGTGCTCCTGACCGGCAAGGGCGACACCCGTG...CTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp GCCCAGAGTCAGGGTCCAGCAGAGGCACGAGACACCCAAGCGAGGTGTCCAAGGCACCACCCCGGGTGCTaGGGGCAGGGCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AQSQGPAEARDTQARCPRHHPGC*GQGLAR
Trigger: CCTGGCCAGGCCCTGCCCTCAGCACCCGGGGTGGTG...CCTTGGACACCTCGCTTGGGTGTCTCGTGCCTCTGCTGGACCCTGACTCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp TCGCTTGCGTCTGCATCACCCACGGGTGTCTCCATCACCGCAGGCTGGGCTGTGCACCACCCCGGGTGCTaGGGGCAGGGCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLASASPTGVSITAGWAVHHPGC*GQGLAR
Trigger: CCTGGCCAGGCCCTGCCCTCAGCACCCGGGGTGGTG...CACAGCCCAGCCTGCGGTGATGGAGACACCCGTGGGTGATGCAGACGCAAGCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp CCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGAGCCTGTGGCCAGGAGGCACCACCCCGGGTGCTaGGGGCAGGGCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGSRQSFTVLSAEPVARRHHPGC*GQGLAR
Trigger: CCTGGCCAGGCCCTGCCCTCAGCACCCGGGGTGGTG...CCTCCTGGCCACAGGCTCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000572153.5
ENST00000632167.1
ENST00000633889.1
CDS-3UTR TCA 90 bp GGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGAGCACCAGACAGGAAGTaGAGCTCGGGTGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GAQGHSGACRPAHAHPCRAPDRK*SSGGAG
Trigger: GCCGGCCCCACCCGAGCTTCACTTCCTGTCTGGTGC...TCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp GTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCCCTGTCCCCCGCTGCTaGGCAGCGGCACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: VLTSHSEAMGVKGVPGQIPVPRC*AAARPH
Trigger: GTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGG...GATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp TCCAGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCCAGGTGAGGTGGAGGTaGCGGGGGCGCAGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: SRPSAGTRHSRILASSPAQVRWR*RGRRLV
Trigger: GACTAGCCTGCGCCCCCGTCACCTCCACCTCACCTG...GGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCCAGGTGAGGTGGAGGTaGCGGGGGCGCAGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSQVRWR*RGRRLV
Trigger: GACTAGCCTGCGCCCCCGTCACCTCCACCTCACCTG...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp GCAGGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCGCGTCGGGTCTCAGGTaGACGCTGAGCAACCGCGAC +
Preference number: 4 (lower is better)
Translates to: AGAQGHSGACRPAHAHPCASGLR*TLSNRD
Trigger: GTCGCGGTTGCTCAGCGTGCACCTGAGACCCGACGC...GCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGCAGGTCCCCATGGGCTaGCAGCTCTGTCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ARRAHQGSISAPDGALHQQVPMG*QLCQGL
Trigger: CAGCCCCTGACAGAGCTGGCAGCCCATGGGGACCTG...CTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR GCA 90 bp AGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAATGACGGCCAGCGCCTaGCGGGGCACAAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RPSAGTRHSRILASSPATMTASA*RGTRAA
Trigger: GGCTGCCCTTGTGCCCCGGCAGGCGCTGGCCGTCAT...TGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GACCTCAAACTGGGGCTGGTCCCGATGCCACTGGTGCTGGAGAGTGAGGGCCCCCTGCAGCGTGGGCAGTaGCGTGTCGGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: DLKLGLVPMPLVLESEGPLQRGQ*RVGQAA
Trigger: GGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAG...GGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGGCTGCCACACGGGTGTCGCCCTTaGCGGTCAGGAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GLHLGSRRRSAPGPHGLPHGCRP*RSGAPG
Trigger: GCCTGGTGCTCCTGACCGGCAAGGGCGACACCCGTG...TGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp CCCTGGGCCTTCCTGCAGGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACGGCGGAACTTGGAACTaGGGCCCAGCAGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PWAFLQGLRATPGPVDPHGGTWN*GPAGSA
Trigger: TGCAGAGCCTGCTGGGCCCCAGTTCCAAGTTCCGCC...GTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGCAGGAAGGCCCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCGGAGTCCTGGGGGAGTaGGTCCTCCCGGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSGVLGE*VLPVPQ
Trigger: CTGGGGAACCGGGAGGACCCACTCCCCCAGGACTCC...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp CTGCCCATCAGGACTCCAGGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGCAGCACCACCCCGGGTGCTaGGGGCAGGGCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPIRTPGQAEDLVLVALQHHPGC*GQGLAR
Trigger: CCTGGCCAGGCCCTGCCCTCAGCACCCGGGGTGGTG...CTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGCCTGGAGTCCTGATGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR TCA 90 bp AAACCCTCGCTTGCGTCTGCATCACCCACGGGTGTCTCCATCACCGCAGGCTGGCACCACCCCGGGTGCTaGGGGCAGGGCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KPSLASASPTGVSITAGWHHPGC*GQGLAR
Trigger: CCTGGCCAGGCCCTGCCCTCAGCACCCGGGGTGGTG...CCAGCCTGCGGTGATGGAGACACCCGTGGGTGATGCAGACGCAAGCGAGGGTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp GTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCGTACCTCGCAGCTCATaGCGGCCAGCGCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: VLTSHSEAMGVKGVPGQIVPRSS*RPAPAG
Trigger: CCCGGCAGGCGCTGGCCGTCATGAGCTGCGAGGTAC...GATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp AGGGCAGCCCCACGCAGCACGCTCTCCAGGACACACTGGGTCACTGGGCTCAGCGCACCAGACAGGAAGTaGAGCTCGGGTGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: RAAPRSTLSRTHWVTGLSAPDRK*SSGGAG
Trigger: GCCGGCCCCACCCGAGCTTCACTTCCTGTCTGGTGC...GCTGAGCCCAGTGACCCAGTGTGTCCTGGAGAGCGTGCTGCGTGGGGCTGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp GGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGGCCAGGCCTCGGCACTaGGCACAGGCTCCCAGATCA +
Preference number: 4 (lower is better)
Translates to: GPLRVPATVGSWRPHQPQARPRH*AQAPRS
Trigger: TGATCTGGGAGCCTGTGCTCAGTGCCGAGGCCTGGC...CTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp GGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGGCTGCCAGTTCCAGGTACTGCGCTaGGGATGGGGCCCGACGAGC +
Preference number: 4 (lower is better)
Translates to: GSISAPDGALHQVPMGCQFQVLR*GWGPTS
Trigger: GCTCGTCGGGCCCCATCCTCAGCGCAGTACCTGGAA...CTGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp GGACTGACGCAGCCGCAGGCACCGCATCAGCTCCACTTCCCGCACGTCGCACTCGCAGGAGTGCAGGGGTaGCATGTGCCGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GLTQPQAPHQLHFPHVALAGVQG*HVPGPE
Trigger: CTCTGGCCCCGGCACATGTCACCCCTGCACTCCTGC...GAGTGCGACGTGCGGGAAGTGGAGCTGATGCGGTGCCTGCGGCTGCGTCAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp CACCAGACAGGAAGTGAAGCTCGGGTGGGGCCGGCAGGCGGGGTTGAGGCTGACGCAGGAGTGCAGGGGTaGCATGTGCCGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: HQTGSEARVGPAGGVEADAGVQG*HVPGPE
Trigger: CTCTGGCCCCGGCACATGTCACCCCTGCACTCCTGC...GTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTGTCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCGTCTCAGGTGCACGCTaGGCAACCGCGACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSVSGAR*ATATPA
Trigger: AGCGGGAGTCGCGGTTGCTCAGCGTGCACCTGAGAC...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp GTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCACCTGCTGGTTGTCCCCGGCCGAGCCTCGGTGTaGCGGAACTTGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: VGPAGGVEADLLHLLVVPGRASV*RNLDTL
Trigger: CAGGGTGTCCAAGTTCCGGCACACCGAGGCTCGGCC...GGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp TCCAGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCCAGGTCCCCATGGGCTaGCAGCTCTGTCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRPSAGTRHSRILASSPAQVPMG*QLCQGL
Trigger: CAGCCCCTGACAGAGCTGGCAGCCCATGGGGACCTG...GGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576437.5
ENST00000632270.1
CDS-3UTR GCA 90 bp TGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGCAGGTCCCCATGGGCTaGCAGCTCTGTCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CGYPPQSDPGVLTSHSEAQVPMG*QLCQGL
Trigger: CAGCCCCTGACAGAGCTGGCAGCCCATGGGGACCTG...CGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576437.5
ENST00000632270.1
CDS-3UTR GCA 90 bp GGTGAGGTGGAGGTGACGGGGGCGCAGGCTAGTCCCACTCGTCCTCGTCCACGCCTCCAGACGGCGCTCTaGACCAGGTCCCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: GEVEVTGAQASPTRPRPRLQTAL*TRSPWA
Trigger: AGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAG...GCGTGGACGAGGACGAGTGGGACTAGCCTGCGCCCCCGTCACCTCCACCTCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp CCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGCTCCAGACGGCGCTCTaGACCAGGTCCCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: PTRAPSRLQTALCTRSPWLQTAL*TRSPWA
Trigger: AGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAG...CCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000572153.5
ENST00000632167.1
ENST00000633889.1
CDS-3UTR GCA 90 bp GGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACTCCAGACGGCGCTCTaGACCAGGTCCCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: GAQGHSGACRPAHAHPCRLQTAL*TRSPWA
Trigger: AGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAG...TCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR GCA 90 bp GGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGGCTGCCAGCTCCAGACGGCGCTCTaGACCAGGTCCCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: GSISAPDGALHQVPMGCQLQTAL*TRSPWA
Trigger: AGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAG...CTGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000572153.5
ENST00000632167.1
ENST00000633889.1
CDS-3UTR GCA 90 bp AGCCCCACGCAGCACGCTCTCCAGGACACACTGGGTCACTGGGCTCAGCGCCGGCTCCAGACGGCGCTCTaGACCAGGTCCCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: SPTQHALQDTLGHWAQRRLQTAL*TRSPWA
Trigger: AGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAG...CCGGCGCTGAGCCCAGTGACCCAGTGTGTCCTGGAGAGCGTGCTGCGTGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp AGCCCCACGCAGCACGCTCTCCAGGACACACTGGGTCACTGGGCTCAGCGCCGGGCAGCTGCTTGTCCTTaGACGCCGTGCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: SPTQHALQDTLGHWAQRRAAACP*TPCPPG
Trigger: CCCTGGTGGGCACGGCGTGCAAGGACAAGCAGCTGC...CCGGCGCTGAGCCCAGTGACCCAGTGTGTCCTGGAGAGCGTGCTGCGTGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCCAAGGTGCTCCCAGGTaGCCATCCATGCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSQGAPR*PSMPAG
Trigger: GCCGGCTGGCATGGATGGGCACCTGGGAGCACCTTG...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp CAGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACCAAGGTGCTCCCAGGTaGCCATCCATGCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: QALCGYPPQSDPGVLTSHQGAPR*PSMPAG
Trigger: GCCGGCTGGCATGGATGGGCACCTGGGAGCACCTTG...GTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CACCCAAGCGAGGTGTCCAAGGTGAGGGAGGCCAGGGCGCTGGAGAAGAACCGCATGACGGCCAGCGCCTaGCGGGGCACAAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: HPSEVSKVREARALEKNRMTASA*RGTRAA
Trigger: GGCTGCCCTTGTGCCCCGGCAGGCGCTGGCCGTCAT...GCGGTTCTTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp AGGCCAGATCAGTCACAGCTGCCCCATTCTGCAGCGTGGGCAGTGCCGTGTCGGCTGCAGCGTGGGCAGTaGCGTGTCGGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RPDQSQLPHSAAWAVPCRLQRGQ*RVGQAA
Trigger: GGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAG...CCGACACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp TCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCACTGCAGCGTGGGCAGTaGCGTGTCGGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SSPATARRWGSKGSQARSLQRGQ*RVGQAA
Trigger: GGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAG...TGATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCCTCTTCCAGGCCCTCTaGGGGTACCCGCCACAGTCG +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSLFQAL*GYPPQS
Trigger: CGACTGTGGCGGGTACCCGCAGAGGGCCTGGAAGAG...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp AGCCCCACGCAGCACGCTCTCCAGGACACACTGGGTCACTGGGCTCAGCGCCGGCTCTTCCAGGCCCTCTaGGGGTACCCGCCACAGTCG +
Preference number: 4 (lower is better)
Translates to: SPTQHALQDTLGHWAQRRLFQAL*GYPPQS
Trigger: CGACTGTGGCGGGTACCCGCAGAGGGCCTGGAAGAG...CCGGCGCTGAGCCCAGTGACCCAGTGTGTCCTGGAGAGCGTGCTGCGTGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGCTCTTCCAGGCCCTCTaGGGGTACCCGCCACAGTCG +
Preference number: 4 (lower is better)
Translates to: GPLRVPATVGSWRPHQPQLFQAL*GYPPQS
Trigger: CGACTGTGGCGGGTACCCGCAGAGGGCCTGGAAGAG...CTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GGCAGGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGTCCAGGCCCAACACTaGCAAGGGTCCGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: GRAWPGPGSRQSFTVLSAVQAQH*QGSAGQ
Trigger: CTGGCCGGCGGACCCTTGGCAGTGTTGGGCCTGGAC...GGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGTCCAGGCCCAACACTaGCAAGGGTCCGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: GHSGACRPAHAHPCRQWPVQAQH*QGSAGQ
Trigger: CTGGCCGGCGGACCCTTGGCAGTGTTGGGCCTGGAC...TGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp CTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAACATCCAAGGCAGGTaGGGGCCAGTCCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LASSPATARRWGSKGSQANIQGR*GPVPAG
Trigger: CCCCGCAGGGACTGGCCCGCACCTGCCTTGGATGTT...GGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp CGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCTCGGTGCAGGACAGTaGCCTGAGAGGCCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: RILASSPATARRWGSKGSLGAGQ*PERPAA
Trigger: AGCCGCGGGCCTCTCAGGGCACTGTCCTGCACCGAG...GGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576437.5
ENST00000632270.1
CDS-3UTR GCA 90 bp CAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCTCGGTGCAGGACAGTaGCCTGAGAGGCCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: QGHSGACRPAHAHPCRQWLGAGQ*PERPAA
Trigger: AGCCGCGGGCCTCTCAGGGCACTGTCCTGCACCGAG...CCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576437.5
ENST00000632270.1
CDS-3UTR CCA 90 bp GGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGGCTGCCAGGAATGGCAGCCCAGGTaGGCCACGCGTCGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GSISAPDGALHQVPMGCQEWQPR*ATRRLS
Trigger: GGACAAGCGACGCGTGGCCCACCTGGGCTGCCATTC...CTGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000572153.5
ENST00000632167.1
ENST00000633889.1
CDS-3UTR CCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCCTGCAGTACCTCCACTaGGAGGTCCTCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSLQYLH*EVLGAQ
Trigger: CTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAG...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp CACCTGTCCCCCGCTGCTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGGGAGGCCAGGGCGCTaGAGAAGAACCGCGTGTCCC +
Preference number: 4 (lower is better)
Translates to: HLSPAAEQRHGHTQLVGTGRPGR*RRTACP
Trigger: GGGACACGCGGTTCTTCTCCAGCGCCCTGGCCTCCC...TGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCAGCTATGGGGGTCGGTaGCAGGCACACAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSSYGGR*QAHSRQ
Trigger: CTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGCT...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp GGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGGCTGCCAGAGCTATGGGGGTCGGTaGCAGGCACACAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GSISAPDGALHQVPMGCQSYGGR*QAHSRQ
Trigger: CTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGCT...CTGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp TTCCTGCAGGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCCAGCCCACCAGCTATaGGGGTCGGTGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: FLQGLRATPGPVDPHTPIPAHQL*GSVAGT
Trigger: TGTGCCTGCCACCGACCCCCATAGCTGGTGGGCTGG...GATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGCAGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp CTTCCAGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGGAAGTGAAGCTCGGGTaGGGCCGGCAGGCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LPGPLRVPATVGSWRPHQEVKLG*GRQAGL
Trigger: CAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTC...CTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp CAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGGCTGGAGGGCGTaGAGGGCGAGGTCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: QGHSGACRPAHAHPCRQWPGWRA*RARSAN
Trigger: GTTCGCTGACCTCGCCCTCCACGCCCTCCAGCCTGG...CCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GCAGGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCGCAGCGACCTCAAACTaGGGCTGGTCCCGATGCCAC +
Preference number: 4 (lower is better)
Translates to: AGAQGHSGACRPAHAHPCAATSN*GWSRCH
Trigger: GTGGCATCGGGACCAGCCCCAGTTTGAGGTCGCTGC...GCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGCCCCATTCTGCAGCGTaGGCAGTGCCGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: GPLRVPATVGSWRPHQPQPHSAA*AVPCRA
Trigger: TGCCCGACACGGCACTGCCCACGCTGCAGAATGGGG...CTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGGCCACAGCGAGGCGATaGGGGTCAAAGGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GPLRVPATVGSWRPHQPQATARR*GSKGSQ
Trigger: CTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGC...CTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR CCA 90 bp CGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCAGGACGAGGCCCTTGTaGGGGTCAGGCGACGTGAAG +
Preference number: 4 (lower is better)
Translates to: RAHQGSISAPDGALHQVPRTRPL*GSGDVK
Trigger: CTTCACGTCGCCTGACCCCCACAAGGGCCTCGTCCT...GGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp GGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCACCACCCCGGGTGCTaGGGGCAGGGCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GDQRSWMRPIQAGTSPGQHHPGC*GQGLAR
Trigger: CCTGGCCAGGCCCTGCCCTCAGCACCCGGGGTGGTG...CTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp AGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGCACCACCCCGGGTGCTaGGGGCAGGGCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RGDMCRGQRGIFQLEDEPHHPGC*GQGLAR
Trigger: CCTGGCCAGGCCCTGCCCTCAGCACCCGGGGTGGTG...CGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp CAGGAAGTGAAGCTCGGGTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCTGGGCCTGCGTGCTCTaGGAGGCCCGCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: QEVKLGWGRQAGLRLTFCWACVL*EARGFV
Trigger: AACAAAGCCGCGGGCCTCTCAGAGCACGCAGGCCCA...GCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp AGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACATGGGCCTGCGTGCTCTaGGAGGCCCGCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: RPSAGTRHSRILASSPATWACVL*EARGFV
Trigger: AACAAAGCCGCGGGCCTCTCAGAGCACGCAGGCCCA...TGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp TCGCTTGCGTCTGCATCACCCACGGGTGTCTCCATCACCGCAGGCTGGGCTGTGGCGAGGTGTCCAAGGTaGGGGAGGCCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SLASASPTGVSITAGWAVARCPR*GRPGRW
Trigger: CCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGC...CACAGCCCAGCCTGCGGTGATGGAGACACCCGTGGGTGATGCAGACGCAAGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp ACACTGGGTCACTGGGCTCAGCGCCGGCTGCTGCGGGACCACCTCGTAACAGTAGTACCTCGCAGCTCATaGCGGCCAGCGCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: TLGHWAQRRLLRDHLVTVVPRSS*RPAPAG
Trigger: CCCGGCAGGCGCTGGCCGTCATGAGCTGCGAGGTAC...TACTGTTACGAGGTGGTCCCGCAGCAGCCGGCGCTGAGCCCAGTGACCCAGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp AGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCACCAGGTCCTGTCCCCCGCTGCTaGGCAGCGGCACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: SGTATRSLLAQKPSLSPGPVPRC*AAARPH
Trigger: GTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGG...ACCTGGTGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp CTTGGTGGCCCTGCAGCTTCAGCCGATCAGCTCCAGCCTGAAGGTCCCAGATGCCCTGTCCCCCGCTGCTaGGCAGCGGCACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: LGGPAASADQLQPEGPRCPVPRC*AAARPH
Trigger: GTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGG...GCATCTGGGACCTTCAGGCTGGAGCTGATCGGCTGAAGCTGCAGGGCCACCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp TTGGCTGCCAGTGGGTGGAAGCGCAGGGAGCAGATCTTCTCCGTGTGGCCTGTGCCTGTCCCCCGCTGCTaGGCAGCGGCACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: LAASGWKRREQIFSVWPVPVPRC*AAARPH
Trigger: GTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGG...CACAGGCCACACGGAGAAGATCTGCTCCCTGCGCTTCCACCCACTGGCAGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCCAGTCTCTGGCGTGGTaGGCACCTCTTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSQSLAW*APLPGP
Trigger: AGGGCCTGGAAGAGGTGCTCACCACGCCAGAGACTG...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp TGCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCACAGTCTCTGGCGTGGTaGGCACCTCTTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: CTPCPPGLHLGSRRRSAPQSLAW*APLPGP
Trigger: AGGGCCTGGAAGAGGTGCTCACCACGCCAGAGACTG...TGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCTCTCCGTGTGGCCTGTaGGCACAGTCTCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSSPCGL*AQSLAW
Trigger: CCACGCCAGAGACTGTGCTCACAGGCCACACGGAGA...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCGGGGGTCAGGCGACGTaGAGCTGTTGCACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSGGQAT*SCCTPG
Trigger: TCCTGGAGTGCAACAGCTTCACGTCGCCTGACCCCC...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCCTGGTCCCAGGGCCCTaGGACTGGTGCTGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSLVPGP*DWCCSR
Trigger: TCTAGAGCAGCACCAGTCTCAGGGCCCTGGGACCAG...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp CTATGGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCGGGCCGAGCCTCGGTGTaGCGGAACTTGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: LWGSVAGTQPAVSGNRSSGRASV*RNLDTL
Trigger: CAGGGTGTCCAAGTTCCGGCACACCGAGGCTCGGCC...CGAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp TCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGGGCCGAGCCTCGGTGTaGCGGAACTTGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: SWRPHQPQRGDGGQRGPRGRASV*RNLDTL
Trigger: CAGGGTGTCCAAGTTCCGGCACACCGAGGCTCGGCC...CCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp TCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGCGAGGGGCCGAGCCTCGGTGTaGCGGAACTTGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: SAGTRHSRILASSPATARGRASV*RNLDTL
Trigger: CAGGGTGTCCAAGTTCCGGCACACCGAGGCTCGGCC...CCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCGAGGTGGGGTGGAACTaGAGTACCTCCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PCPPGLHLGSRRRSAPGPEVGWN*STSTGR
Trigger: CCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTC...GGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000572153.5
ENST00000632167.1
ENST00000633889.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCTCTGTCAGGGGCTGCTaGTTGGCTGCGTCCCAGACC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSSVRGC*LAASQT
Trigger: GGTCTGGGACGCAGCCAAGCAGCAGCCCCTGACAGA...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000614702.4
ENST00000617235.2
CDS-3UTR GCA 90 bp GGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGAGCCAGGTCCCCATGGGCTaGCAGCTCTGTCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GPGQALAVARVLPSCQPSQVPMG*QLCQGL
Trigger: CAGCCCCTGACAGAGCTGGCAGCCCATGGGGACCTG...GCTCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCTGTCCTTGCACGCCGTaGCCACCAGGGCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSCPCTP*PPGLHL
Trigger: GAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGACA...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp TCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGCGAGGGCAGCTGCTTGTCCTTaGACGCCGTGCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: SAGTRHSRILASSPATARAAACP*TPCPPG
Trigger: CCCTGGTGGGCACGGCGTGCAAGGACAAGCAGCTGC...CCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR GCA 90 bp GTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCACCTGCTGGTTGTCCCCCCAGCCGGCTATCCCTaGTGTTCTCATGGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: VGPAGGVEADLLHLLVVPPAGYP*CSHGPA
Trigger: CGCAGGCCCATGAGAACAGCAGGGATAGCCGGCTGG...GGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCAC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCCCTCTCGCCCTTTCCTaGCAGGACCAGGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSPLALS*QDQEPR
Trigger: TCTGGGCTCCTGGTCCTGGCAGGAAAGGGCGAGAGG...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp TCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCAATGACGGCCAGCGCCTaGCGGGGCACAAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSPATARRWGSKGSQARSMTASA*RGTRAA
Trigger: GGCTGCCCTTGTGCCCCGGCAGGCGCTGGCCGTCAT...TGATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCTCCCGATGCCACTGGTaGTGGAGAGTGAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LASSPATARRWGSKGSQASRCHW*WRVRAP
Trigger: TGGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGA...GGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGATCCCGATGCCACTGGTaGTGGAGAGTGAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GAQGHSGACRPAHAHPCRSRCHW*WRVRAP
Trigger: TGGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGA...TCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CAGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACTCCCGATGCCACTGGTaGTGGAGAGTGAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: QALCGYPPQSDPGVLTSHSRCHW*WRVRAP
Trigger: TGGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGA...GTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp TGGGCAGTGCCGTGTCGGGCAGGCGGCCAGGCTTCCGTAGCTCAAGCACAGCCAGGGCCCAGCAGGCTCTaGAGCGACCTCAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: WAVPCRAGGQASVAQAQPGPSRL*SDLKLG
Trigger: CCCCAGTTTGAGGTCGCTGCAGAGCCTGCTGGGCCC...TGGCTGTGCTTGAGCTACGGAAGCCTGGCCGCCTGCCCGACACGGCACTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGGCTGCCAACAGCTGCCCCATTCTaGAGCGTGGGCAGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: GLHLGSRRRSAPGPHGLPTAAPF*SVGSAV
Trigger: CACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGT...TGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCACAGCTGCCCCATTCTaGAGCGTGGGCAGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSTAAPF*SVGSAV
Trigger: CACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGT...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp TTCCTGCAGGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCACAGTGGCCAGCTGCTaGCCATCAGGACTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FLQGLRATPGPVDPHTPITVASC*PSGLQA
Trigger: GGCCTGGAGTCCTGATGGGCAGCAGCTGGCCACTGT...GATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGCAGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CACTCGTCCTCGTCCACGCCTTCAAAGGAGTCCTGGGGGAGTGGGTCCTCCCGGCACGGGTGTCGCCCTTaGCGGTCAGGAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: HSSSSTPSKESWGSGSSRHGCRP*RSGAPG
Trigger: GCCTGGTGCTCCTGACCGGCAAGGGCGACACCCGTG...CCGGGAGGACCCACTCCCCCAGGACTCCTTTGAAGGCGTGGACGAGGACGAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCTGCCCATTAGCGCCTTaGAGCCAGGCCTCGGCACTG +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSCPLAP*SQASAL
Trigger: CAGTGCCGAGGCCTGGCTGCAAGGCGCTAATGGGCA...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp TCCAGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCAGCCGAGCCTCGGTGTaGCGGAACTTGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: SRPSAGTRHSRILASSPASRASV*RNLDTL
Trigger: CAGGGTGTCCAAGTTCCGGCACACCGAGGCTCGGCT...GGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576437.5
ENST00000632270.1
CDS-3UTR GCA 90 bp GCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGCTGCCAGCTCAGAATaGCGTCAGAGGTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ARRAHQGSISAPDGALHQAASSE*RQRWGG
Trigger: TCCACCCCACCTCTGACGGCATTCTGAGCTGGCAGC...CTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp TCACCTTGCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGAATGGCAGCCCAGGTaGGCCACGCGTCGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SPCTPCPPGLHLGSRRRSEWQPR*ATRRLS
Trigger: GGACAAGCGACGCGTGGCCCACCTGGGCTGCCATTC...AGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR CCA 90 bp AGGGCAGCCCCACGCAGCACGCTCTCCAGGACACACTGGGTCACTGGGCTCAGCCTGCAGTACCTCCACTaGGAGGTCCTCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RAAPRSTLSRTHWVTGLSLQYLH*EVLGAQ
Trigger: CTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAG...GCTGAGCCCAGTGACCCAGTGTGTCCTGGAGAGCGTGCTGCGTGGGGCTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGCCCAGACCTTCACAGTaGTGCCTGCTGCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: ARRAHQGSISAPDGALHQPRPSQ*CLLRSP
Trigger: TGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGG...CTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR CCA 90 bp TCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGGACACACTGGGTCACTaGGCTCAGCGCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SWRPHQPQRGDGGQRGPRDTLGH*AQRRLL
Trigger: CAGCAGCCGGCGCTGAGCCCAGTGACCCAGTGTGTC...CCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GCAGGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCGCACATGGTAGCCGATaGGCACGATGGCTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: AGAQGHSGACRPAHAHPCAHGSR*ARWLCR
Trigger: GCGACACAGCCATCGTGCCCATCGGCTACCATGTGC...GCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp CTGCTTGTCCTTGCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCTCCATCACCGCAGGCTaGGCTGTGTCAGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LLVLARRAHQGSISAPDGSITAG*AVSGRG
Trigger: GCCCCTCCCTGACACAGCCCAGCCTGCGGTGATGGA...GCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGACAAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp AGGGCAGCCCCACGCAGCACGCTCTCCAGGACACACTGGGTCACTGGGCTCAGCTCCATCACCGCAGGCTaGGCTGTGTCAGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RAAPRSTLSRTHWVTGLSSITAG*AVSGRG
Trigger: GCCCCTCCCTGACACAGCCCAGCCTGCGGTGATGGA...GCTGAGCCCAGTGACCCAGTGTGTCCTGGAGAGCGTGCTGCGTGGGGCTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp CACCCAAGCGAGGTGTCCAAGGTGAGGGAGGCCAGGGCGCTGGAGAAGAACCGCCCAGGCTGGAGGGCGTaGAGGGCGAGGTCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: HPSEVSKVREARALEKNRPGWRA*RARSAN
Trigger: GTTCGCTGACCTCGCCCTCCACGCCCTCCAGCCTGG...GCGGTTCTTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCTGGTCCCGATGCCACTaGTGCTGGAGAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSWSRCH*CWRVRA
Trigger: GGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCA...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp CCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGGCAGCGACCTCAAACTaGGGCTGGTCCCGATGCCAC +
Preference number: 4 (lower is better)
Translates to: PTRAPSRLQTALCTRSPWAATSN*GWSRCH
Trigger: GTGGCATCGGGACCAGCCCCAGTTTGAGGTCGCTGC...CCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp GTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCACCTGCTGGTTGTCCCCGCAGCGACCTCAAACTaGGGCTGGTCCCGATGCCAC +
Preference number: 4 (lower is better)
Translates to: VGPAGGVEADLLHLLVVPAATSN*GWSRCH
Trigger: GTGGCATCGGGACCAGCCCCAGTTTGAGGTCGCTGC...GGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCGCAGCGACCTCAAACTaGGGCTGGTCCCGATGCCAC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSAATSN*GWSRCH
Trigger: GTGGCATCGGGACCAGCCCCAGTTTGAGGTCGCTGC...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp GGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCACCCCATTCTGCAGCGTaGGCAGTGCCGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: GHSGACRPAHAHPCRQWPPHSAA*AVPCRA
Trigger: TGCCCGACACGGCACTGCCCACGCTGCAGAATGGGG...TGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCCACAGCGAGGCGATaGGGGTCAAAGGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GHSGACRPAHAHPCRQWPATARR*GSKGSQ
Trigger: CTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGC...TGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR CCA 90 bp CAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGGCCACAGCGAGGCGATaGGGGTCAAAGGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: QGHSGACRPAHAHPCRQWATARR*GSKGSQ
Trigger: CTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGC...CCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GGTGAGGTGGAGGTGACGGGGGCGCAGGCTAGTCCCACTCGTCCTCGTCCACGCCACCAGGCCAGTGTCTaGGTCGTAGCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GEVEVTGAQASPTRPRPRHQASV*VVAGQQ
Trigger: CTGCTGCCCAGCTACGACCCAGACACTGGCCTGGTG...GCGTGGACGAGGACGAGTGGGACTAGCCTGCGCCCCCGTCACCTCCACCTCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR CCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCAGGACGAGGCCCTTGTaGGGGTCAGGCGACGTGAAG +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSRTRPL*GSGDVK
Trigger: CTTCACGTCGCCTGACCCCCACAAGGGCCTCGTCCT...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp TGCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGGGGCTTGGCTCACTaGGCTCATGTCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CTPCPPGLHLGSRRRSAPGGLAH*AHVRRL
Trigger: CAGCCTCCTGACATGAGCCCAGTGAGCCAAGCCCCC...TGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCGAGGCCAATCCAGGCTaGGACCAGCCCAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSEANPG*DQPRSA
Trigger: TGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTC...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp CCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGGAGGCCAATCCAGGCTaGGACCAGCCCAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PTRAPSRLQTALCTRSPWEANPG*DQPRSA
Trigger: TGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTC...CCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp TTCCTGCAGGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCGATGTGGTTCCTGCATaGAGGGGCGGTTCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: FLQGLRATPGPVDPHTPIDVVPA*RGGSCS
Trigger: CGAGCAGGAACCGCCCCTTCATGCAGGAACCACATC...GATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGCAGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCCAGGACGGTCGGAGTTaGAGGCGATCAAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSQDGRS*RRSSCS
Trigger: GCTGCAGCTTGATCGCCTTCAACTCCGACCGTCCTG...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp ACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGCACCACCCCGGGTGCTaGGGGCAGGGCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TCAGAREVSSSLRMSREVHHPGC*GQGLAR
Trigger: CCTGGCCAGGCCCTGCCCTCAGCACCCGGGGTGGTG...CACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp GACCTCAAACTGGGGCTGGTCCCGATGCCACTGGTGCTGGAGAGTGAGGGCCCCTGGGCCTGCGTGCTCTaGGAGGCCCGCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: DLKLGLVPMPLVLESEGPWACVL*EARGFV
Trigger: AACAAAGCCGCGGGCCTCTCAGAGCACGCAGGCCCA...GGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp CTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCAGCGAGGTGTCCAAGGTaGGGGAGGCCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LSSGTATRSLLAQKPSLSARCPR*GRPGRW
Trigger: CCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGC...TGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp AGCGACCATCACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGTACCTCGCAGCTCATaGCGGCCAGCGCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: SDHHIPRQCELRVLPWALVPRSS*RPAPAG
Trigger: CCCGGCAGGCGCTGGCCGTCATGAGCTGCGAGGTAC...CAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp CTGCCCATCAGGACTCCAGGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGCAGGTACCTCGCAGCTCATaGCGGCCAGCGCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: LPIRTPGQAEDLVLVALQVPRSS*RPAPAG
Trigger: CCCGGCAGGCGCTGGCCGTCATGAGCTGCGAGGTAC...CTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGCCTGGAGTCCTGATGGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp GCGACCATCACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGGCACCAGACAGGAAGTaGAGCTCGGGTGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: ATITYPDNASSASSLGPWAPDRK*SSGGAG
Trigger: GCCGGCCCCACCCGAGCTTCACTTCCTGTCTGGTGC...CCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCCCTGTCCCCCGCTGCTaGGCAGCGGCACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCPVPRC*AAARPH
Trigger: GTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGG...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp ACATTGGCTGCCAGTGGGTGGAAGCGCAGGGAGCAGATCTTCTCCGTGTGGCCTCCTGTCCCCCGCTGCTaGGCAGCGGCACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: TLAASGWKRREQIFSVWPPVPRC*AAARPH
Trigger: GTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGG...AGGCCACACGGAGAAGATCTGCTCCCTGCGCTTCCACCCACTGGCAGCCAATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp GATCTGGTCTTGGTGGCCCTGCAGCTTCAGCCGATCAGCTCCAGCCTGAAGGTCCCTGTCCCCCGCTGCTaGGCAGCGGCACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: DLVLVALQLQPISSSLKVPVPRC*AAARPH
Trigger: GTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGG...GACCTTCAGGCTGGAGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACCAGATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp AGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGCCTGTCCCCCGCTGCTaGGCAGCGGCACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: RGDMCRGQRGIFQLEDEPPVPRC*AAARPH
Trigger: GTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGG...CGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp GGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCACAGTCTCTGGCGTGGTaGGCACCTCTTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GHSGACRPAHAHPCRQWPQSLAW*APLPGP
Trigger: AGGGCCTGGAAGAGGTGCTCACCACGCCAGAGACTG...TGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp CTTCCAGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCAGTCTCTGGCGTGGTaGGCACCTCTTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LPGPLRVPATVGSWRPHQQSLAW*APLPGP
Trigger: AGGGCCTGGAAGAGGTGCTCACCACGCCAGAGACTG...CTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTGGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp CTTCCAGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGTCTCCGTGTGGCCTGTaGGCACAGTCTCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LPGPLRVPATVGSWRPHQSPCGL*AQSLAW
Trigger: CCACGCCAGAGACTGTGCTCACAGGCCACACGGAGA...CTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTGGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp TCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGCGAGGTCTCCGTGTGGCCTGTaGGCACAGTCTCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SAGTRHSRILASSPATARSPCGL*AQSLAW
Trigger: CCACGCCAGAGACTGTGCTCACAGGCCACACGGAGA...CCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp AGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGGGCTCCAGGGAGGACTaGCGCAGCCGCAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: RGDMCRGQRGIFQLEDEPGSRED*RSRRHR
Trigger: GCGGTGCCTGCGGCTGCGTCAGTCCTCCCTGGAGCC...CGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCGGCTCCAGGGAGGACTaGCGCAGCCGCAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSGSRED*RSRRHR
Trigger: GCGGTGCCTGCGGCTGCGTCAGTCCTCCCTGGAGCC...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp CCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGTGGGCTCCAGGGAGGACTaGCGCAGCCGCAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: PKILDEANPGWDQPRSAVGSRED*RSRRHR
Trigger: GCGGTGCCTGCGGCTGCGTCAGTCCTCCCTGGAGCC...CACTGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCGGCTCCAGGGAGGACTaGCGCAGCCGCAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCGSRED*RSRRHR
Trigger: GCGGTGCCTGCGGCTGCGTCAGTCCTCCCTGGAGCC...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp ACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCTGTTCCAGGTACTGCGCTaGGGATGGGGCCCGACGAGC +
Preference number: 4 (lower is better)
Translates to: TPGPVDPHTPILADSGQLFQVLR*GWGPTS
Trigger: GCTCGTCGGGCCCCATCCTCAGCGCAGTACCTGGAA...CAGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp CGCAGGCTAGTCCCACTCGTCCTCGTCCACGCCTTCAAAGGAGTCCTGGGGGAGCAGGTGAGGTGGAGGTaGCGGGGGCGCAGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: RRLVPLVLVHAFKGVLGEQVRWR*RGRRLV
Trigger: GACTAGCCTGCGCCCCCGTCACCTCCACCTCACCTG...CTCCCCCAGGACTCCTTTGAAGGCGTGGACGAGGACGAGTGGGACTAGCCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp TGCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAAGCCCCCAAGGCCCTTaGCCAGAACTGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: CTPCPPGLHLGSRRRSAPSPQGP*PELEQQ
Trigger: CTGCTGTTCCAGTTCTGGTCAAGGGCCTTGGGGGCT...TGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCAGCCCCCAAGGCCCTTaGCCAGAACTGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSSPQGP*PELEQQ
Trigger: CTGCTGTTCCAGTTCTGGTCAAGGGCCTTGGGGGCT...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp TCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCTGGTCCCAGGGCCCTaGGACTGGTGCTGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SAGTRHSRILASSPATARLVPGP*DWCCSR
Trigger: TCTAGAGCAGCACCAGTCTCAGGGCCCTGGGACCAG...CCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp GGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGGCTGCCAGGACCATCAGCTCTGTaGTGCCCCCTTCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GLHLGSRRRSAPGPHGLPGPSAL*CPLLLA
Trigger: AGCCAGGAGAAGGGGGCATCACAGAGCTGATGGTCC...TGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp CACCAGCTATGGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGAGGCGGGCAGGAGCCTaGCACAAGGTTTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: HQLWGSVAGTQPAVSGNRRRAGA*HKVCAP
Trigger: GGGAGCACAAACCTTGTGTCAGGCTCCTGCCCGCCT...CCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGCTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571756.5
ENST00000633681.1
CDS-3UTR GCA 90 bp CAGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACGAGGTGGGGTGGAACTaGAGTACCTCCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QALCGYPPQSDPGVLTSHEVGWN*STSTGR
Trigger: CCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTC...GTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR GCA 90 bp AGCCCCACGCAGCACGCTCTCCAGGACACACTGGGTCACTGGGCTCAGCGCCGGGAGGTGGGGTGGAACTaGAGTACCTCCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPTQHALQDTLGHWAQRREVGWN*STSTGR
Trigger: CCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTC...CCGGCGCTGAGCCCAGTGACCCAGTGTGTCCTGGAGAGCGTGCTGCGTGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGGAGGTGGGGTGGAACTaGAGTACCTCCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PTRAPSRLQTALCTRSPWEVGWN*STSTGR
Trigger: CCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTC...CCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000572153.5
ENST00000632167.1
ENST00000633889.1
CDS-3UTR GCA 90 bp CTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCCTGCGCTCACCAGAATaGCGTCAGAGGTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LASSPATARRWGSKGSQALRSPE*RQRWGG
Trigger: TCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAG...GGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000576437.5
ENST00000632270.1
CDS-3UTR GCA 90 bp TGCTCACCTTGCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCCTGCGCTCACCAGAATaGCGTCAGAGGTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CSPCTPCPPGLHLGSRRRLRSPE*RQRWGG
Trigger: TCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAG...GCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGTGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR GCA 90 bp CAGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACGGGCTGCTGCTTGGCTaGGTCCCAGACCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: QALCGYPPQSDPGVLTSHGLLLG*VPDLHS
Trigger: ACTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGCCC...GTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576437.5
ENST00000632270.1
CDS-3UTR GCA 90 bp CAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGTCTGTCAGGGGCTGCTaGTTGGCTGCGTCCCAGACC +
Preference number: 4 (lower is better)
Translates to: QGHSGACRPAHAHPCRQWSVRGC*LAASQT
Trigger: GGTCTGGGACGCAGCCAAGCAGCAGCCCCTGACAGA...CCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576437.5
ENST00000632270.1
CDS-3UTR GCA 90 bp AGGGCAGCCCCACGCAGCACGCTCTCCAGGACACACTGGGTCACTGGGCTCAGCTGTCCTTGCACGCCGTaGCCACCAGGGCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: RAAPRSTLSRTHWVTGLSCPCTP*PPGLHL
Trigger: GAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGACA...GCTGAGCCCAGTGACCCAGTGTGTCCTGGAGAGCGTGCTGCGTGGGGCTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CACCAGCTATGGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGCCAGCCGGCTATCCCTaGTGTTCTCATGGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: HQLWGSVAGTQPAVSGNRPAGYP*CSHGPA
Trigger: CGCAGGCCCATGAGAACAGCAGGGATAGCCGGCTGG...CCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGCTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp TCGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCAAGGTGCTCCCAGGTaGCCATCCATGCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: SDPGVLTSHSEAMGVKGVQGAPR*PSMPAG
Trigger: GCCGGCTGGCATGGATGGGCACCTGGGAGCACCTTG...GACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GTGGCCCTGCAGCTTCAGCCGATCAGCTCCAGCCTGAAGGTCCCAGATGCGAACATGACGGCCAGCGCCTaGCGGGGCACAAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VALQLQPISSSLKVPDANMTASA*RGTRAA
Trigger: GGCTGCCCTTGTGCCCCGGCAGGCGCTGGCCGTCAT...GTTCGCATCTGGGACCTTCAGGCTGGAGCTGATCGGCTGAAGCTGCAGGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCGGAACTCCACAGCCTTaGGGGGCACATGGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSGTPQP*GAHGSR
Trigger: TCGGCTACCATGTGCCCCGCAAGGCTGTGGAGTTCC...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp GGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGCTGACCTTCTGCACCTaGTGGTTGTCCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GPLRVPATVGSWRPHQPQLTFCT*WLSPAH
Trigger: GTGGGCTGGGGACAACCAGCAGGTGCAGAAGGTCAG...CTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp TCCAGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCCTGACCTTCTGCACCTaGTGGTTGTCCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SRPSAGTRHSRILASSPALTFCT*WLSPAH
Trigger: GTGGGCTGGGGACAACCAGCAGGTGCAGAAGGTCAG...GGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCACCCTCGCTTGCGTCTaGATCACCCACGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSTLACV*ITHGCL
Trigger: GAGACACCCGTGGGTGATGCAGACGCAAGCGAGGGT...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp CCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGACCCTCGCTTGCGTCTaGATCACCCACGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PTRAPSRLQTALCTRSPWTLACV*ITHGCL
Trigger: GAGACACCCGTGGGTGATGCAGACGCAAGCGAGGGT...CCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp CTATGGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCGTCCCGATGCCACTGGTaGTGGAGAGTGAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LWGSVAGTQPAVSGNRSSSRCHW*WRVRAP
Trigger: TGGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGA...CGAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CACCTGTCCCCCGCTGCTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACATGGGGCTGGTCCCGATaGCACTGGTGCTGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: HLSPAAEQRHGHTQLVGTWGWSR*HWCWRV
Trigger: CACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCA...TGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CAGGAAGTGAAGCTCGGGTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCTGGGGCTGGTCCCGATaGCACTGGTGCTGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: QEVKLGWGRQAGLRLTFCWGWSR*HWCWRV
Trigger: CACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCA...GCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp TCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGTGGGGCTGGTCCCGATaGCACTGGTGCTGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SWRPHQPQRGDGGQRGPRWGWSR*HWCWRV
Trigger: CACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCA...CCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CACCAGCTATGGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTGGGGCTGGTCCCGATaGCACTGGTGCTGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: HQLWGSVAGTQPAVSGNRWGWSR*HWCWRV
Trigger: CACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCA...CCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGCTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp TCTGCAGCGTGGGCAGTGCCGTGTCGGGCAGGCGGCCAGGCTTCCGTAGACAGCCTCGGTGCAGGACAGTaGCCTGAGCATGGCGGAACT +
Preference number: 4 (lower is better)
Translates to: SAAWAVPCRAGGQASVDSLGAGQ*PEHGGT
Trigger: AGTTCCGCCATGCTCAGGGCACTGTCCTGCACCGAG...GCTGTCTACGGAAGCCTGGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574311.5
ENST00000633467.1
CDS-3UTR GCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCTGCAGCGTGGGCAGTaGCGTGTCGGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSLQRGQ*RVGQAA
Trigger: GGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAG...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp CTCCAGGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGCAGCTTCAGCCGATCACTGCAGCGTGGGCAGTaGCGTGTCGGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LQARLKIWSWWPCSFSRSLQRGQ*RVGQAA
Trigger: GGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAG...TGATCGGCTGAAGCTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGCCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCACAGCTGCCCCATTCTaGAGCGTGGGCAGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: RILASSPATARRWGSKGSTAAPF*SVGSAV
Trigger: CACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGT...GGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGAGCGGCCAGCACATTGGCTaGCAGTGGGTGGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: GPGQALAVARVLPSCQPSGQHIG*QWVEAQ
Trigger: CTGCGCTTCCACCCACTGGCAGCCAATGTGCTGGCC...GCTCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GCAGGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCTGGTCTTGGTGGCCCTaGAGCTTCAGCCGATCAGCT +
Preference number: 4 (lower is better)
Translates to: AGAQGHSGACRPAHAHPCWSWWP*SFSRSA
Trigger: AGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACCA...GCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp AGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAACAGTGGCCAGCTGCTaGCCATCAGGACTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RPSAGTRHSRILASSPATTVASC*PSGLQA
Trigger: GGCCTGGAGTCCTGATGGGCAGCAGCTGGCCACTGT...TGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp TCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGCGAGGACAGTGGCCAGCTGCTaGCCATCAGGACTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SAGTRHSRILASSPATARTVASC*PSGLQA
Trigger: GGCCTGGAGTCCTGATGGGCAGCAGCTGGCCACTGT...CCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCTGCCCATTAGCGCCTTaGAGCCAGGCCTCGGCACTG +
Preference number: 4 (lower is better)
Translates to: RILASSPATARRWGSKGSCPLAP*SQASAL
Trigger: CAGTGCCGAGGCCTGGCTGCAAGGCGCTAATGGGCA...GGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp CCCATCAGGACTCCAGGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGCAGCTTAACCGCGACTCCCGCTaGCTCGGCCCCACCCGGGAC +
Preference number: 4 (lower is better)
Translates to: PIRTPGQAEDLVLVALQLNRDSR*LGPTRD
Trigger: GTCCCGGGTGGGGCCGAGGCAGCGGGAGTCGCGGTT...AAGCTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGCCTGGAGTCCTGATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR GCA 90 bp CCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGTGAACCGCGACTCCCGCTaGCTCGGCCCCACCCGGGAC +
Preference number: 4 (lower is better)
Translates to: PKILDEANPGWDQPRSAVNRDSR*LGPTRD
Trigger: GTCCCGGGTGGGGCCGAGGCAGCGGGAGTCGCGGTT...CACTGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp CGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCTCAAAGATCCGCAGCTaGTTGTCCTCGCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RILASSPATARRWGSKGSSKIRS*LSSRRG
Trigger: GCCCCGCCGCGAGGACAAGCAGCTGCGGATCTTTGA...GGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000574311.5
ENST00000633467.1
CDS-3UTR CCA 90 bp CACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCTGAATGGCAGCCCAGGTaGGCCACGCGTCGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: HSGACRPAHAHPCRQWPAEWQPR*ATRRLS
Trigger: GGACAAGCGACGCGTGGCCCACCTGGGCTGCCATTC...AGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp GTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCACCTGCTGGTTGTCCCCGTGACTAGGTCTGAATaGCAGCCCAGGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: VGPAGGVEADLLHLLVVPVTRSE*QPRWAT
Trigger: CGTGGCCCACCTGGGCTGCCATTCAGACCTAGTCAC...GGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp ACAGGAAGTGAAGCTCGGGTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCTGCAGTACCTCCACTaGGAGGTCCTCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TGSEARVGPAGGVEADLLLQYLH*EVLGAQ
Trigger: CTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAG...CAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp CTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCCCCAGACCTTCACAGTaGTGCCTGCTGCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: LASSPATARRWGSKGSQAPRPSQ*CLLRSP
Trigger: TGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGG...GGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000576437.5
ENST00000632270.1
CDS-3UTR CCA 90 bp ACACCCAAGCGAGGTGTCCAAGGTGAGGGAGGCCAGGGCGCTGGAGAAGAACCGGGGAGGCCAGGGCGCTaGAGAAGAACCGCGTGTCCC +
Preference number: 4 (lower is better)
Translates to: TPKRGVQGEGGQGAGEEPGRPGR*RRTACP
Trigger: GGGACACGCGGTTCTTCTCCAGCGCCCTGGCCTCCC...CGGTTCTTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GCTATGGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCCTCTCCAGGACACACTaGGTCACTGGGCTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: AMGVGGRHTAGSVREQVLLSRTH*VTGLSA
Trigger: GGCGCTGAGCCCAGTGACCCAGTGTGTCCTGGAGAG...GAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGGGGAACAGGTCCTCGTaGAACTCCACAGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GPLRVPATVGSWRPHQPQGNRSS*NSTALR
Trigger: CCGCAAGGCTGTGGAGTTCCACGAGGACCTGTTCCC...CTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp TTCCTGCAGGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCGGGAACAGGTCCTCGTaGAACTCCACAGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: FLQGLRATPGPVDPHTPIGNRSS*NSTALR
Trigger: CCGCAAGGCTGTGGAGTTCCACGAGGACCTGTTCCC...GATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGCAGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp ACAGGAAGTGAAGCTCGGGTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGAGCTATGGGGGTCGGTaGCAGGCACACAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: TGSEARVGPAGGVEADLLSYGGR*QAHSRQ
Trigger: CTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGCT...CAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp TCCGTGTGGCCTGTGAGCACAGTCTCTGGCGTGGTGAGCACCTCTTCCAGGCCCGAAGTGAAGCTCGGGTaGGGCCGGCAGGCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SVWPVSTVSGVVSTSSRPEVKLG*GRQAGL
Trigger: CAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTC...GGGCCTGGAAGAGGTGCTCACCACGCCAGAGACTGTGCTCACAGGCCACACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCGTGGAACTTCCATCACCGCAGGCTaGGCTGTGTCAGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GRWQAHSRQCPGTGPRGTSITAG*AVSGRG
Trigger: GCCCCTCCCTGACACAGCCCAGCCTGCGGTGATGGA...AGTTCCACGAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GCTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCCCAGGCTGGAGGGCGTaGAGGGCGAGGTCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: AEQRHGHTQLVGTEAVTLPGWRA*RARSAN
Trigger: GTTCGCTGACCTCGCCCTCCACGCCCTCCAGCCTGG...GAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp TCCGTGTGGCCTGTGAGCACAGTCTCTGGCGTGGTGAGCACCTCTTCCAGGCCCCCAGGCTGGAGGGCGTaGAGGGCGAGGTCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: SVWPVSTVSGVVSTSSRPPGWRA*RARSAN
Trigger: GTTCGCTGACCTCGCCCTCCACGCCCTCCAGCCTGG...GGGCCTGGAAGAGGTGCTCACCACGCCAGAGACTGTGCTCACAGGCCACACGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GCCCAGAGTCAGGGTCCAGCAGAGGCACGAGACACCCAAGCGAGGTGTCCAAGGCCAGGCTGGAGGGCGTaGAGGGCGAGGTCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: AQSQGPAEARDTQARCPRPGWRA*RARSAN
Trigger: GTTCGCTGACCTCGCCCTCCACGCCCTCCAGCCTGG...CCTTGGACACCTCGCTTGGGTGTCTCGTGCCTCTGCTGGACCCTGACTCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GCTATGGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCTGGTCCCGATGCCACTaGTGCTGGAGAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: AMGVGGRHTAGSVREQVLWSRCH*CWRVRA
Trigger: GGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCA...GAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCACCTCAAACTGGGGCTaGTCCCGATGCCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSTSNWG*SRCHWC
Trigger: GCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGT...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp CAGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACACCTCAAACTGGGGCTaGTCCCGATGCCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: QALCGYPPQSDPGVLTSHTSNWG*SRCHWC
Trigger: GCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGT...GTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp ACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCTGGCCACAGCGAGGCGATaGGGGTCAAAGGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: TPGPVDPHTPILADSGQLATARR*GSKGSQ
Trigger: CTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGC...CAGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR CCA 90 bp CGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCGCCACAGTCGGATCCTaGCGTCCTCACCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: RILASSPATARRWGSKGSATVGS*RPHQPQ
Trigger: CTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGC...GGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GGTGAGGTGGAGGTGACGGGGGCGCAGGCTAGTCCCACTCGTCCTCGTCCACGCTTGGCTGCCAGTGGGTaGAAGCGCAGGGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: GEVEVTGAQASPTRPRPRLAASG*KRREQI
Trigger: GATCTGCTCCCTGCGCTTCCACCCACTGGCAGCCAA...GCGTGGACGAGGACGAGTGGGACTAGCCTGCGCCCCCGTCACCTCCACCTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCTTGGCTGCCAGTGGGTaGAAGCGCAGGGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSLAASG*KRREQI
Trigger: GATCTGCTCCCTGCGCTTCCACCCACTGGCAGCCAA...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp GCGTGGGCAGTGCCGTGTCGGGCAGGCGGCCAGGCTTCCGTAGACAGCTGTGTGTTGGCTGCCAGTGGGTaGAAGCGCAGGGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: AWAVPCRAGGQASVDSCVLAASG*KRREQI
Trigger: GATCTGCTCCCTGCGCTTCCACCCACTGGCAGCCAA...CACACAGCTGTCTACGGAAGCCTGGCCGCCTGCCCGACACGGCACTGCCCACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574311.5
ENST00000633467.1
CDS-3UTR CCA 90 bp CCCTGGGCCTTCCTGCAGGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACAAGATCTGGTCTTGGTaGCCCTGCAGCTTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: PWAFLQGLRATPGPVDPHKIWSW*PCSFSR
Trigger: TCGGCTGAAGCTGCAGGGCCACCAAGACCAGATCTT...GTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGCAGGAAGGCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp CTATGGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCGCACCAGGCCAGTGTCTaGGTCGTAGCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LWGSVAGTQPAVSGNRSSHQASV*VVAGQQ
Trigger: CTGCTGCCCAGCTACGACCCAGACACTGGCCTGGTG...CGAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp GGACTGACGCAGCCGCAGGCACCGCATCAGCTCCACTTCCCGCACGTCGCACTCGAGGCCCAGAGGATGTaGAAGTGCCCACGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GLTQPQAPHQLHFPHVALEAQRM*KCPREG
Trigger: GCCTTCCCGTGGGCACTTCCACATCCTCTGGGCCTC...GAGTGCGACGTGCGGGAAGTGGAGCTGATGCGGTGCCTGCGGCTGCGTCAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp AGCCGATGGGCACGATGGCTGTGTCGCTCAGCTGTAGGACGCGGAGTACCTCGCGCAGCCCTGGTGGGGTaGGGCCCTCACCTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: SRWARWLCRSAVGRGVPRAALVG*GPHLKH
Trigger: GTGCTTGAGGTGAGGGCCCCACCCCACCAGGGCTGC...GCGAGGTACTCCGCGTCCTACAGCTGAGCGACACAGCCATCGTGCCCATCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571756.5
ENST00000633681.1
3UTR CAA 72 bp CCCCCGCTGCTGAGCAGCGGCACGGCCACACGCAGCTaGTTGGCACAGAAGCCGTCACTCTCACCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: PPLLSSGTATRS*LAQKPSLSPGV
Trigger: CACACCTGGTGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGCAGCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp GAGTTTTACCGTCCTGTCAGCCGAGCCTGTGGCCAGGAGGAAGTCATCAAAGGGCACCACCCCGGGTGCTaGGGGCAGGGCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EFYRPVSRACGQEEVIKGHHPGC*GQGLAR
Trigger: CCTGGCCAGGCCCTGCCCTCAGCACCCGGGGTGGTG...CCCTTTGATGACTTCCTCCTGGCCACAGGCTCGGCTGACAGGACGGTAAAACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000572153.5
ENST00000632167.1
ENST00000633889.1
CDS-3UTR TCA 90 bp GCGACCATCACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGTGGGCCTGCGTGCTCTaGGAGGCCCGCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: ATITYPDNASSASSLGPWWACVL*EARGFV
Trigger: AACAAAGCCGCGGGCCTCTCAGAGCACGCAGGCCCA...CCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp AGGCCAGATCAGTCACAGCTGCCCCATTCTGCAGCGTGGGCAGTGCCGTGTCGGTGGGCCTGCGTGCTCTaGGAGGCCCGCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: RPDQSQLPHSAAWAVPCRWACVL*EARGFV
Trigger: AACAAAGCCGCGGGCCTCTCAGAGCACGCAGGCCCA...CCGACACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp AGCCGATGGGCACGATGGCTGTGTCGCTCAGCTGTAGGACGCGGAGTACCTCGCTGGGCCTGCGTGCTCTaGGAGGCCCGCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: SRWARWLCRSAVGRGVPRWACVL*EARGFV
Trigger: AACAAAGCCGCGGGCCTCTCAGAGCACGCAGGCCCA...GCGAGGTACTCCGCGTCCTACAGCTGAGCGACACAGCCATCGTGCCCATCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp GCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTGCGAGGTGTCCAAGGTaGGGGAGGCCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: AGAREVSSSLRMSREVCTARCPR*GRPGRW
Trigger: CCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGC...AGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCGCGAGGTGTCCAAGGTaGGGGAGGCCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSARCPR*GRPGRW
Trigger: CCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGC...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp CCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGTGGTACCTCGCAGCTCATaGCGGCCAGCGCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: PKILDEANPGWDQPRSAVVPRSS*RPAPAG
Trigger: CCCGGCAGGCGCTGGCCGTCATGAGCTGCGAGGTAC...CACTGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCGTACCTCGCAGCTCATaGCGGCCAGCGCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCVPRSS*RPAPAG
Trigger: CCCGGCAGGCGCTGGCCGTCATGAGCTGCGAGGTAC...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp CTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCAGCACCAGACAGGAAGTaGAGCTCGGGTGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: LSSGTATRSLLAQKPSLSAPDRK*SSGGAG
Trigger: GCCGGCCCCACCCGAGCTTCACTTCCTGTCTGGTGC...TGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp GTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCACCTGCTGGTTGTCCCCTGCAGGACAGTGCCCTaGGCATGGCGGAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: VGPAGGVEADLLHLLVVPCRTVP*AWRNLE
Trigger: TTCCAAGTTCCGCCATGCTCAGGGCACTGTCCTGCA...GGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp ACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGCCTGTCCCCCGCTGCTaGGCAGCGGCACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: TCAGAREVSSSLRMSREVPVPRC*AAARPH
Trigger: GTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGG...CACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp CACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCTTCTCCGTGTGGCCTGTaGGCACAGTCTCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: HSGACRPAHAHPCRQWPASPCGL*AQSLAW
Trigger: CCACGCCAGAGACTGTGCTCACAGGCCACACGGAGA...AGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp GGCTCCATCTCGGCTCCAGACGGCGCTCTGCACCAGGTCCCCATGGGCTGCCAGCCCAGATGCGAACAGTaGGGTCATAGGAGGACGAGG +
Preference number: 4 (lower is better)
Translates to: GSISAPDGALHQVPMGCQPRCEQ*GHRRTR
Trigger: CCTCGTCCTCCTATGACCTCACTGTTCGCATCTGGG...CTGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCCGATCAGCTCCAGCCTaGAGGTCCCAGATGCGAACA +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSRSAPA*RSQMRT
Trigger: TGTTCGCATCTGGGACCTTCAGGCTGGAGCTGATCG...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp TCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGCGAGGGACTCCAGGCCAGGCTaGAGATCTGGTCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SAGTRHSRILASSPATARDSRPG*RSGLGG
Trigger: GCCACCAAGACCAGATCTTCAGCCTGGCCTGGAGTC...CCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp CACTCGTCCTCGTCCACGCCTTCAAAGGAGTCCTGGGGGAGTGGGTCCTCCCGGGGGGGTCAGGCGACGTaGAGCTGTTGCACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HSSSSTPSKESWGSGSSRGGQAT*SCCTPG
Trigger: TCCTGGAGTGCAACAGCTTCACGTCGCCTGACCCCC...CCGGGAGGACCCACTCCCCCAGGACTCCTTTGAAGGCGTGGACGAGGACGAGTG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp TGGAACAGCAGGCAAGATGGGGCAGCGTGGGGTGACCAAAGATCCTGGATGAGGGGCTCCAGGGAGGACTaGCGCAGCCGCAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: WNSRQDGAAWGDQRSWMRGSRED*RSRRHR
Trigger: GCGGTGCCTGCGGCTGCGTCAGTCCTCCCTGGAGCC...CCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTGCCTGCTGTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp CGCAGGCTAGTCCCACTCGTCCTCGTCCACGCCTTCAAAGGAGTCCTGGGGGAGTTCCAGGTACTGCGCTaGGGATGGGGCCCGACGAGC +
Preference number: 4 (lower is better)
Translates to: RRLVPLVLVHAFKGVLGEFQVLR*GWGPTS
Trigger: GCTCGTCGGGCCCCATCCTCAGCGCAGTACCTGGAA...CTCCCCCAGGACTCCTTTGAAGGCGTGGACGAGGACGAGTGGGACTAGCCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp GGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCGTGGAACTAGGCGGGCAGGAGCCTaGCACAAGGTTTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GRWQAHSRQCPGTGPRGTRRAGA*HKVCAP
Trigger: GGGAGCACAAACCTTGTGTCAGGCTCCTGCCCGCCT...AGTTCCACGAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571756.5
ENST00000633681.1
CDS-3UTR GCA 90 bp ACACCCAAGCGAGGTGTCCAAGGTGAGGGAGGCCAGGGCGCTGGAGAAGAACCGGCGTCGGGTCTCAGGTaGACGCTGAGCAACCGCGAC +
Preference number: 4 (lower is better)
Translates to: TPKRGVQGEGGQGAGEEPASGLR*TLSNRD
Trigger: GTCGCGGTTGCTCAGCGTGCACCTGAGACCCGACGC...CGGTTCTTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp TGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGAGCCTGTGGGCCGAGCCTCGGTGTaGCGGAACTTGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: WPGPGSRQSFTVLSAEPVGRASV*RNLDTL
Trigger: CAGGGTGTCCAAGTTCCGGCACACCGAGGCTCGGCC...CACAGGCTCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000572153.5
ENST00000632167.1
ENST00000633889.1
CDS-3UTR GCA 90 bp GCTGCCAGCTCTGTCAGGGGCTGCTGCTTGGCTGCGTCCCAGACCTTCACAGTGGGCCGAGCCTCGGTGTaGCGGAACTTGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: AASSVRGCCLAASQTFTVGRASV*RNLDTL
Trigger: CAGGGTGTCCAAGTTCCGGCACACCGAGGCTCGGCC...CACTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGCCCCTGACAGAGCTGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR GCA 90 bp CTGCTTGTCCTTGCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGAGGTGGGGTGGAACTaGAGTACCTCCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLVLARRAHQGSISAPDGEVGWN*STSTGR
Trigger: CCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTC...GCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGACAAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp CGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCGAGGTGGGGTGGAACTaGAGTACCTCCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RILASSPATARRWGSKGSEVGWN*STSTGR
Trigger: CCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTC...GGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR GCA 90 bp GGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGAGCCTGCGCTCACCAGAATaGCGTCAGAGGTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GPGQALAVARVLPSCQPSLRSPE*RQRWGG
Trigger: TCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAG...GCTCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR GCA 90 bp GCCGTCAGAGGTGGGGTGGAACTGCAGTACCTCCACTGGGAGGTCCTCGGGGCCCACAGTGGTGCCTGCTaGGCTCACCAGAATGCCGTC +
Preference number: 4 (lower is better)
Translates to: AVRGGVELQYLHWEVLGAHSGAC*AHQNAV
Trigger: GACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTG...GGCCCCGAGGACCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTCTGACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR GCA 90 bp TCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGCGAGGGGGCTGCTGCTTGGCTaGGTCCCAGACCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: SAGTRHSRILASSPATARGLLLG*VPDLHS
Trigger: ACTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGCCC...CCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000576437.5
ENST00000632270.1
CDS-3UTR GCA 90 bp GGGCTGCCAGCTCTGTCAGGGGCTGCTGCTTGGCTGCGTCCCAGACCTTCACAGAGCTCTGTCAGGGGCTaGTGCTTGGCTGCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GLPALSGAAAWLRPRPSQSSVRG*CLAASQ
Trigger: CTGGGACGCAGCCAAGCAGCAGCCCCTGACAGAGCT...CTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGCCCCTGACAGAGCTGGCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR GCA 90 bp CAGGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGATGTCCTTGCACGCCGTaGCCACCAGGGCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: QGLARPWQSPEFYRPVSRCPCTP*PPGLHL
Trigger: GAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGACA...TCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCGTGGAACTTGTCCTTGCACGCCGTaGCCACCAGGGCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: GRWQAHSRQCPGTGPRGTCPCTP*PPGLHL
Trigger: GAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGACA...AGTTCCACGAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGAGCCTGTGGCCAGGAGGGCAGCTGCTTGTCCTTaGACGCCGTGCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PGSRQSFTVLSAEPVARRAAACP*TPCPPG
Trigger: CCCTGGTGGGCACGGCGTGCAAGGACAAGCAGCTGC...CCTCCTGGCCACAGGCTCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCCCTCTCGCCCTTTCCTaGCAGGACCAGGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VLTSHSEAMGVKGVPGQIPLALS*QDQEPR
Trigger: TCTGGGCTCCTGGTCCTGGCAGGAAAGGGCGAGAGG...GATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GCCGGGCTTCGGATCCCAGCTCCACCACTTACACAGCTGTGTGACCCGGGCAGGCCTCTCGCCCTTTCCTaGCAGGACCAGGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: AGLRIPAPPLTQLCDPGRPLALS*QDQEPR
Trigger: TCTGGGCTCCTGGTCCTGGCAGGAAAGGGCGAGAGG...CCTGCCCGGGTCACACAGCTGTGTAAGTGGTGGAGCTGGGATCCGAAGCCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571756.5
ENST00000633681.1
CDS-3UTR GCA 90 bp GCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTATGACGGCCAGCGCCTaGCGGGGCACAAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AGAREVSSSLRMSREVCTMTASA*RGTRAA
Trigger: GGCTGCCCTTGTGCCCCGGCAGGCGCTGGCCGTCAT...AGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCATGACGGCCAGCGCCTaGCGGGGCACAAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCMTASA*RGTRAA
Trigger: GGCTGCCCTTGTGCCCCGGCAGGCGCTGGCCGTCAT...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp TCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGGGAACTCCACAGCCTTaGGGGGCACATGGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: SWRPHQPQRGDGGQRGPRGTPQP*GAHGSR
Trigger: TCGGCTACCATGTGCCCCGCAAGGCTGTGGAGTTCC...CCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CAGGAAGTGAAGCTCGGGTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCCTGACCTTCTGCACCTaGTGGTTGTCCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: QEVKLGWGRQAGLRLTFCLTFCT*WLSPAH
Trigger: GTGGGCTGGGGACAACCAGCAGGTGCAGAAGGTCAG...GCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp AGGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGAGTCCCGATGCCACTGGTaGTGGAGAGTGAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RAWPGPGSRQSFTVLSAESRCHW*WRVRAP
Trigger: TGGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGA...CTCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp CTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTTGGGGCTGGTCCCGATaGCACTGGTGCTGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LRATPGPVDPHTPILADSWGWSR*HWCWRV
Trigger: CACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCA...ACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp TCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCAGGGCCCAGCAGGCTCTaGAGCGACCTCAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: SSPATARRWGSKGSQARSGPSRL*SDLKLG
Trigger: CCCCAGTTTGAGGTCGCTGCAGAGCCTGCTGGGCCC...TGATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GTCCCAGGCCAGATCAGTCACAGCTGCCCCATTCTGCAGCGTGGGCAGTGCCGTGGGCCCAGCAGGCTCTaGAGCGACCTCAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: VPGQISHSCPILQRGQCRGPSRL*SDLKLG
Trigger: CCCCAGTTTGAGGTCGCTGCAGAGCCTGCTGGGCCC...ACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTGGCCTGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGCTGCAGCGTGGGCAGTaGCGTGTCGGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: VTCAGAREVSSSLRMSRELQRGQ*RVGQAA
Trigger: GGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAG...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp CCAGACACCAGCAGACAGCGACCATCACATACCCAGACAATGCGAGCTCCGCGTCTGCAGCGTGGGCAGTaGCGTGTCGGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PDTSRQRPSHTQTMRAPRLQRGQ*RVGQAA
Trigger: GGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAG...ACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGCTGTCTGCTGGTGTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp AGCAGGCAAGATGGGGCAGCGTGGGGTGACCAAAGATCCTGGATGAGGCCAATCCTGCAGCGTGGGCAGTaGCGTGTCGGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SRQDGAAWGDQRSWMRPILQRGQ*RVGQAA
Trigger: GGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAG...GATTGGCCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTGCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp GTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCACAGCTGCCCCATTCTaGAGCGTGGGCAGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: VLTSHSEAMGVKGVPGQITAAPF*SVGSAV
Trigger: CACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGT...GATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCCAGATCAGTCACAGCTaGCCCATTCTGCAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSQISHS*PILQRG
Trigger: CCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTG...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp CTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCCAGATCAGTCACAGCTaGCCCATTCTGCAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: LASSPATARRWGSKGSQAQISHS*PILQRG
Trigger: CCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTG...GGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp AGGCCAGATCAGTCACAGCTGCCCCATTCTGCAGCGTGGGCAGTGCCGTGTCGGCTCTTCCAGGCCCTCTaGGGGTACCCGCCACAGTCG +
Preference number: 4 (lower is better)
Translates to: RPDQSQLPHSAAWAVPCRLFQAL*GYPPQS
Trigger: CGACTGTGGCGGGTACCCGCAGAGGGCCTGGAAGAG...CCGACACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp ATCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGGCCAGCACATTGGCTaGCAGTGGGTGGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: ILASSPATARRWGSKGSQGQHIG*QWVEAQ
Trigger: CTGCGCTTCCACCCACTGGCAGCCAATGTGCTGGCC...CTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp TCCAGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCTGGTCTTGGTGGCCCTaGAGCTTCAGCCGATCAGCT +
Preference number: 4 (lower is better)
Translates to: SRPSAGTRHSRILASSPAWSWWP*SFSRSA
Trigger: AGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACCA...GGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GAGGTGGGGTGGAACTGCAGTACCTCCACTGGGAGGTCCTCGGGGCCCAGCACCCAGACAGTGGCCAGCTaGTGCCCATCAGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: EVGWNCSTSTGRSSGPSTQTVAS*CPSGLQ
Trigger: CTGGAGTCCTGATGGGCAGCAGCTGGCCACTGTCTG...GGTGCTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCGGCCCTGGGCCTTCCTaGAGGGGCTCAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSGPGPS*RGSGPL
Trigger: GAGTGGCCCTGAGCCCCTGCAGGAAGGCCCAGGGCC...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp GCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTGGCCCTGGGCCTTCCTaGAGGGGCTCAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: AGAREVSSSLRMSREVCTGPGPS*RGSGPL
Trigger: GAGTGGCCCTGAGCCCCTGCAGGAAGGCCCAGGGCC...AGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCGGCCCTGGGCCTTCCTaGAGGGGCTCAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCGPGPS*RGSGPL
Trigger: GAGTGGCCCTGAGCCCCTGCAGGAAGGCCCAGGGCC...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp GGTGAGGTGGAGGTGACGGGGGCGCAGGCTAGTCCCACTCGTCCTCGTCCACGCCACATACCCAGACAATaGGAGCTCCGCGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GEVEVTGAQASPTRPRPRHIPRQ*ELRVLP
Trigger: AGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTG...GCGTGGACGAGGACGAGTGGGACTAGCCTGCGCCCCCGTCACCTCCACCTCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp ACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCTGTGCCCATTAGCGCCTTaGAGCCAGGCCTCGGCACTG +
Preference number: 4 (lower is better)
Translates to: TPGPVDPHTPILADSGQLCPLAP*SQASAL
Trigger: CAGTGCCGAGGCCTGGCTGCAAGGCGCTAATGGGCA...CAGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp CACCAGACAGGAAGTGAAGCTCGGGTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTGAGAAGCCAGGGCTaGCCATTAGCGCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: HQTGSEARVGPAGGVEADLRSQG*PLAPCS
Trigger: GCTGCAAGGCGCTAATGGGCAGCCCTGGCTTCTCAG...GTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTGTCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp AGCAGGCAAGATGGGGCAGCGTGGGGTGACCAAAGATCCTGGATGAGGCCAATCAACCGCGACTCCCGCTaGCTCGGCCCCACCCGGGAC +
Preference number: 4 (lower is better)
Translates to: SRQDGAAWGDQRSWMRPINRDSR*LGPTRD
Trigger: GTCCCGGGTGGGGCCGAGGCAGCGGGAGTCGCGGTT...GATTGGCCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTGCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp CAGACACCAGCAGACAGCGACCATCACATACCCAGACAATGCGAGCTCCGCGTCAACCGCGACTCCCGCTaGCTCGGCCCCACCCGGGAC +
Preference number: 4 (lower is better)
Translates to: QTPADSDHHIPRQCELRVNRDSR*LGPTRD
Trigger: GTCCCGGGTGGGGCCGAGGCAGCGGGAGTCGCGGTT...GACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGCTGTCTGCTGGTGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGAACCGCGACTCCCGCTaGCTCGGCCCCACCCGGGAC +
Preference number: 4 (lower is better)
Translates to: VTCAGAREVSSSLRMSRENRDSR*LGPTRD
Trigger: GTCCCGGGTGGGGCCGAGGCAGCGGGAGTCGCGGTT...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp TACCGTCCTGTCAGCCGAGCCTGTGGCCAGGAGGAAGTCATCAAAGGGCGAGAAAACCGCGACTCCCGCTaGCTCGGCCCCACCCGGGAC +
Preference number: 4 (lower is better)
Translates to: YRPVSRACGQEEVIKGRENRDSR*LGPTRD
Trigger: GTCCCGGGTGGGGCCGAGGCAGCGGGAGTCGCGGTT...TTCTCGCCCTTTGATGACTTCCTCCTGGCCACAGGCTCGGCTGACAGGACGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp AGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACACCTCATCAGTCCTCCTaGCGTTTCGGGGGTCCGAAG +
Preference number: 4 (lower is better)
Translates to: RPSAGTRHSRILASSPATPHQSS*RFGGPK
Trigger: CTTCGGACCCCCGAAACGGCAGGAGGACTGATGAGG...TGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp CAGGAAGTGAAGCTCGGGTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCGCTGCCAGCTCAGAATaGCGTCAGAGGTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QEVKLGWGRQAGLRLTFCAASSE*RQRWGG
Trigger: TCCACCCCACCTCTGACGGCATTCTGAGCTGGCAGC...GCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp GCCGAGCCTGTGGCCAGGAGGAAGTCATCAAAGGGCGAGAAGTCCAAGTCGGTGCTTTGGGGCTCCACCTaGTCAGGCTCGCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: AEPVARRKSSKGEKSKSVLWGST*SGSRRG
Trigger: GCCCCGCCGCGAGCCTGAGCAGGTGGAGCCCCAAAG...CACCGACTTGGACTTCTCGCCCTTTGATGACTTCCTCCTGGCCACAGGCTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp AGCCGATGGGCACGATGGCTGTGTCGCTCAGCTGTAGGACGCGGAGTACCTCGCGAATGGCAGCCCAGGTaGGCCACGCGTCGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SRWARWLCRSAVGRGVPREWQPR*ATRRLS
Trigger: GGACAAGCGACGCGTGGCCCACCTGGGCTGCCATTC...GCGAGGTACTCCGCGTCCTACAGCTGAGCGACACAGCCATCGTGCCCATCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGAGCGTGACTAGGTCTGAATaGCAGCCCAGGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: GPGQALAVARVLPSCQPSVTRSE*QPRWAT
Trigger: CGTGGCCCACCTGGGCTGCCATTCAGACCTAGTCAC...GCTCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000572153.5
ENST00000632167.1
ENST00000633889.1
CDS-3UTR CCA 90 bp GGCAGGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGTGACTAGGTCTGAATaGCAGCCCAGGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: GRAWPGPGSRQSFTVLSAVTRSE*QPRWAT
Trigger: CGTGGCCCACCTGGGCTGCCATTCAGACCTAGTCAC...GGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000572153.5
ENST00000632167.1
ENST00000633889.1
CDS-3UTR CCA 90 bp CACGAGACACCCAAGCGAGGTGTCCAAGGTGAGGGAGGCCAGGGCGCTGGAGAACTGCAGTACCTCCACTaGGAGGTCCTCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HETPKRGVQGEGGQGAGELQYLH*EVLGAQ
Trigger: CTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAG...TTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTGTCTCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp CCAGCTCTGTCAGGGGCTGCTGCTTGGCTGCGTCCCAGACCTTCACAGTGGTGCCTGCAGTACCTCCACTaGGAGGTCCTCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PALSGAAAWLRPRPSQWCLQYLH*EVLGAQ
Trigger: CTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAG...GCACCACTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGCCCCTGACAGAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR CCA 90 bp ACACCCAAGCGAGGTGTCCAAGGTGAGGGAGGCCAGGGCGCTGGAGAAGAACCGCTGCAGTACCTCCACTaGGAGGTCCTCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TPKRGVQGEGGQGAGEEPLQYLH*EVLGAQ
Trigger: CTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAG...CGGTTCTTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp TTCCTGCAGGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCCCGCGGCTTTGTTCTaGGGTCAAAGATCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: FLQGLRATPGPVDPHTPIPAALF*GQRSAA
Trigger: AGCTGCGGATCTTTGACCCCAGAACAAAGCCGCGGG...GATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGCAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp ACACCCAAGCGAGGTGTCCAAGGTGAGGGAGGCCAGGGCGCTGGAGAAGAACCGGACACACTGGGTCACTaGGCTCAGCGCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TPKRGVQGEGGQGAGEEPDTLGH*AQRRLL
Trigger: CAGCAGCCGGCGCTGAGCCCAGTGACCCAGTGTGTC...CGGTTCTTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GTCCCAGGCCAGATCAGTCACAGCTGCCCCATTCTGCAGCGTGGGCAGTGCCGTGACACACTGGGTCACTaGGCTCAGCGCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VPGQISHSCPILQRGQCRDTLGH*AQRRLL
Trigger: CAGCAGCCGGCGCTGAGCCCAGTGACCCAGTGTGTC...ACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTGGCCTGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GCCCAGAGTCAGGGTCCAGCAGAGGCACGAGACACCCAAGCGAGGTGTCCAAGGGACACACTGGGTCACTaGGCTCAGCGCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AQSQGPAEARDTQARCPRDTLGH*AQRRLL
Trigger: CAGCAGCCGGCGCTGAGCCCAGTGACCCAGTGTGTC...CCTTGGACACCTCGCTTGGGTGTCTCGTGCCTCTGCTGGACCCTGACTCTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp AGGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGAGCTCTCCAGGACACACTaGGTCACTGGGCTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: RAWPGPGSRQSFTVLSAELSRTH*VTGLSA
Trigger: GGCGCTGAGCCCAGTGACCCAGTGTGTCCTGGAGAG...CTCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCAGCCGATGGGCACGATaGCTGTGTCGCTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSSRWAR*LCRSAV
Trigger: TACAGCTGAGCGACACAGCCATCGTGCCCATCGGCT...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp GTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCACCTGCTGGTTGTCCCCAGCCGATGGGCACGATaGCTGTGTCGCTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: VGPAGGVEADLLHLLVVPSRWAR*LCRSAV
Trigger: TACAGCTGAGCGACACAGCCATCGTGCCCATCGGCT...GGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp CAGGAAGTGAAGCTCGGGTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCGCACATGGTAGCCGATaGGCACGATGGCTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: QEVKLGWGRQAGLRLTFCAHGSR*ARWLCR
Trigger: GCGACACAGCCATCGTGCCCATCGGCTACCATGTGC...GCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCACATGGTAGCCGATaGGCACGATGGCTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: GHSGACRPAHAHPCRQWPAHGSR*ARWLCR
Trigger: GCGACACAGCCATCGTGCCCATCGGCTACCATGTGC...TGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp TCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCAAGCTATGGGGGTCGGTaGCAGGCACACAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: SSPATARRWGSKGSQARSSYGGR*QAHSRQ
Trigger: CTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGCT...TGATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp CGACCATCACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGGCCAGCCCACCAGCTATaGGGGTCGGTGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: RPSHTQTMRAPRPPLGPGPAHQL*GSVAGT
Trigger: TGTGCCTGCCACCGACCCCCATAGCTGGTGGGCTGG...CCCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GCCCAGAGTCAGGGTCCAGCAGAGGCACGAGACACCCAAGCGAGGTGTCCAAGGCCAGCCCACCAGCTATaGGGGTCGGTGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: AQSQGPAEARDTQARCPRPAHQL*GSVAGT
Trigger: TGTGCCTGCCACCGACCCCCATAGCTGGTGGGCTGG...CCTTGGACACCTCGCTTGGGTGTCTCGTGCCTCTGCTGGACCCTGACTCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp CCATCACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGGCCTTCCATCACCGCAGGCTaGGCTGTGTCAGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PSHTQTMRAPRPPLGPGPSITAG*AVSGRG
Trigger: GCCCCTCCCTGACACAGCCCAGCCTGCGGTGATGGA...AGGCCCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GCGACCATCACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGTCCATCACCGCAGGCTaGGCTGTGTCAGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ATITYPDNASSASSLGPWSITAG*AVSGRG
Trigger: GCCCCTCCCTGACACAGCCCAGCCTGCGGTGATGGA...CCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp AAACCCTCGCTTGCGTCTGCATCACCCACGGGTGTCTCCATCACCGCAGGCTGGCCAGGCTGGAGGGCGTaGAGGGCGAGGTCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: KPSLASASPTGVSITAGWPGWRA*RARSAN
Trigger: GTTCGCTGACCTCGCCCTCCACGCCCTCCAGCCTGG...CCAGCCTGCGGTGATGGAGACACCCGTGGGTGATGCAGACGCAAGCGAGGGTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCGTGGAACTTGGTCCCGATGCCACTaGTGCTGGAGAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GRWQAHSRQCPGTGPRGTWSRCH*CWRVRA
Trigger: GGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCA...AGTTCCACGAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GGCAGGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCACCTCAAACTGGGGCTaGTCCCGATGCCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: GRAWPGPGSRQSFTVLSATSNWG*SRCHWC
Trigger: GCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGT...GGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp CACTCGTCCTCGTCCACGCCTTCAAAGGAGTCCTGGGGGAGTGGGTCCTCCCGGGGCGGAACTTGGAACTaGGGCCCAGCAGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: HSSSSTPSKESWGSGSSRGGTWN*GPAGSA
Trigger: TGCAGAGCCTGCTGGGCCCCAGTTCCAAGTTCCGCC...CCGGGAGGACCCACTCCCCCAGGACTCCTTTGAAGGCGTGGACGAGGACGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp CACCCAAGCGAGGTGTCCAAGGTGAGGGAGGCCAGGGCGCTGGAGAAGAACCGCGGCGGAACTTGGAACTaGGGCCCAGCAGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: HPSEVSKVREARALEKNRGGTWN*GPAGSA
Trigger: TGCAGAGCCTGCTGGGCCCCAGTTCCAAGTTCCGCC...GCGGTTCTTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp ACAGGAAGTGAAGCTCGGGTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGGGCGGAACTTGGAACTaGGGCCCAGCAGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TGSEARVGPAGGVEADLLGGTWN*GPAGSA
Trigger: TGCAGAGCCTGCTGGGCCCCAGTTCCAAGTTCCGCC...CAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp CGCAGGCTAGTCCCACTCGTCCTCGTCCACGCCTTCAAAGGAGTCCTGGGGGAGCCCCATTCTGCAGCGTaGGCAGTGCCGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: RRLVPLVLVHAFKGVLGEPHSAA*AVPCRA
Trigger: TGCCCGACACGGCACTGCCCACGCTGCAGAATGGGG...CTCCCCCAGGACTCCTTTGAAGGCGTGGACGAGGACGAGTGGGACTAGCCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp ACACCCAAGCGAGGTGTCCAAGGTGAGGGAGGCCAGGGCGCTGGAGAAGAACCGGCCACAGCGAGGCGATaGGGGTCAAAGGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: TPKRGVQGEGGQGAGEEPATARR*GSKGSQ
Trigger: CTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGC...CGGTTCTTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp AGGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGAGGCCACAGTCGGATCCTaGCGTCCTCACCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: RAWPGPGSRQSFTVLSAEATVGS*RPHQPQ
Trigger: CTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGC...CTCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp CACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCTGCCACAGTCGGATCCTaGCGTCCTCACCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: HSGACRPAHAHPCRQWPAATVGS*RPHQPQ
Trigger: CTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGC...AGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR CCA 90 bp CGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCTTGGCTGCCAGTGGGTaGAAGCGCAGGGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: RILASSPATARRWGSKGSLAASG*KRREQI
Trigger: GATCTGCTCCCTGCGCTTCCACCCACTGGCAGCCAA...GGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GCAGGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAAGATCTGGTCTTGGTaGCCCTGCAGCTTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: AGAQGHSGACRPAHAHPCKIWSW*PCSFSR
Trigger: TCGGCTGAAGCTGCAGGGCCACCAAGACCAGATCTT...GCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GGCAGGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCTGTCTGGGTCGTAGCTaGGCAGCAGGGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GRAWPGPGSRQSFTVLSACLGRS*AAGLRE
Trigger: CTCCCTCAACCCTGCTGCCCAGCTACGACCCAGACA...GGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp CACTCGTCCTCGTCCACGCCTTCAAAGGAGTCCTGGGGGAGTGGGTCCTCCCGGCACCAGGCCAGTGTCTaGGTCGTAGCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HSSSSTPSKESWGSGSSRHQASV*VVAGQQ
Trigger: CTGCTGCCCAGCTACGACCCAGACACTGGCCTGGTG...CCGGGAGGACCCACTCCCCCAGGACTCCTTTGAAGGCGTGGACGAGGACGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR CCA 90 bp GCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAGGGGGCTTGGCTCACTaGGCTCATGTCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ATVGSWRPHQPQRGDGGQGGLAH*AHVRRL
Trigger: CAGCCTCCTGACATGAGCCCAGTGAGCCAAGCCCCC...TTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp GGTCTTGGTGGCCCTGCAGCTTCAGCCGATCAGCTCCAGCCTGAAGGTCCCAGAGGAGTCCTGGGGGAGTaGGTCCTCCCGGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GLGGPAASADQLQPEGPRGVLGE*VLPVPQ
Trigger: CTGGGGAACCGGGAGGACCCACTCCCCCAGGACTCC...TCTGGGACCTTCAGGCTGGAGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp AGGGAGGCCAGGGCGCTGGAGAAGAACCGCGTGTCCCACAGCTTCACTTCGCGCCCTTCAAAGGAGTCCTaGGGGAGTGGGTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: REARALEKNRVSHSFTSRPSKES*GSGSSR
Trigger: CCGGGAGGACCCACTCCCCCAGGACTCCTTTGAAGG...GCGCGAAGTGAAGCTGTGGGACACGCGGTTCTTCTCCAGCGCCCTGGCCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp TCCAGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCCAAGATGGGGCAGCGTaGGGTGACCAAAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: SRPSAGTRHSRILASSPAQDGAA*GDQRSW
Trigger: CCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTG...GGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp GGACTGACGCAGCCGCAGGCACCGCATCAGCTCCACTTCCCGCACGTCGCACTCTGCACCAGGTCCCCATaGGCTGCCAGCTCAGAATGC +
Preference number: 4 (lower is better)
Translates to: GLTQPQAPHQLHFPHVALCTRSP*AASSEC
Trigger: GCATTCTGAGCTGGCAGCCCATGGGGACCTGGTGCA...GAGTGCGACGTGCGGGAAGTGGAGCTGATGCGGTGCCTGCGGCTGCGTCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CAA 72 bp GCAGCCCAGGTGGGCCACGCGTCGCTTGTCCTCTCCTaGGCCTTGCAGAGGCACAATGCCCAGTACACCAGG +
Preference number: 4 (lower is better)
Translates to: AAQVGHASLVLS*ALQRHNAQYTR
Trigger: CCTGGTGTACTGGGCATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCGACGCGTGGCCCACCTGGGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
3UTR CAA 72 bp CCGCTGCTGAGCAGCGGCACGGCCACACGCAGCTTGTaGGCACAGAAGCCGTCACTCTCACCAGGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PLLSSGTATRSL*AQKPSLSPGVV
Trigger: CACCACACCTGGTGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGCAGCGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp ACAGGAAGTGAAGCTCGGGTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGGGAACTTGGACACCCTaGAGCGGTTCATGGCGACGG +
Preference number: 4 (lower is better)
Translates to: TGSEARVGPAGGVEADLLGTWTP*SGSWRR
Trigger: CCGTCGCCATGAACCGCTTCAGGGTGTCCAAGTTCC...CAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp AGCCGATGGGCACGATGGCTGTGTCGCTCAGCTGTAGGACGCGGAGTACCTCGCCTGCTCGAATGTCACTaGTCCAGGACTCGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: SRWARWLCRSAVGRGVPRLLECH*SRTRGG
Trigger: CCCGCCGCGAGTCCTGGATCAGTGACATTCGAGCAG...GCGAGGTACTCCGCGTCCTACAGCTGAGCGACACAGCCATCGTGCCCATCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571756.5
ENST00000633681.1
CDS-3UTR TCA 90 bp CAGACACCAGCAGACAGCGACCATCACATACCCAGACAATGCGAGCTCCGCGTCGCGAGGTGTCCAAGGTaGGGGAGGCCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: QTPADSDHHIPRQCELRVARCPR*GRPGRW
Trigger: CCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGC...GACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGCTGTCTGCTGGTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGCGAGGTGTCCAAGGTaGGGGAGGCCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: VTCAGAREVSSSLRMSREARCPR*GRPGRW
Trigger: CCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGC...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp ACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGGTACCTCGCAGCTCATaGCGGCCAGCGCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: TCAGAREVSSSLRMSREVVPRSS*RPAPAG
Trigger: CCCGGCAGGCGCTGGCCGTCATGAGCTGCGAGGTAC...CACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp AGCAGGCAAGATGGGGCAGCGTGGGGTGACCAAAGATCCTGGATGAGGCCAATCGTACCTCGCAGCTCATaGCGGCCAGCGCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: SRQDGAAWGDQRSWMRPIVPRSS*RPAPAG
Trigger: CCCGGCAGGCGCTGGCCGTCATGAGCTGCGAGGTAC...GATTGGCCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTGCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp CAGACACCAGCAGACAGCGACCATCACATACCCAGACAATGCGAGCTCCGCGTCGTACCTCGCAGCTCATaGCGGCCAGCGCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: QTPADSDHHIPRQCELRVVPRSS*RPAPAG
Trigger: CCCGGCAGGCGCTGGCCGTCATGAGCTGCGAGGTAC...GACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGCTGTCTGCTGGTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp AGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGGCACCAGACAGGAAGTaGAGCTCGGGTGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: RGDMCRGQRGIFQLEDEPAPDRK*SSGGAG
Trigger: GCCGGCCCCACCCGAGCTTCACTTCCTGTCTGGTGC...CGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp CCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGTGGCACCAGACAGGAAGTaGAGCTCGGGTGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: PKILDEANPGWDQPRSAVAPDRK*SSGGAG
Trigger: GCCGGCCCCACCCGAGCTTCACTTCCTGTCTGGTGC...CACTGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp AACAGTGAGGTCATAGGAGGACGAGGCCAGCACATTGGCTGCCAGTGGGTGGAACCTGTCCCCCGCTGCTaGGCAGCGGCACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: NSEVIGGRGQHIGCQWVEPVPRC*AAARPH
Trigger: GTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGG...TTCCACCCACTGGCAGCCAATGTGCTGGCCTCGTCCTCCTATGACCTCACTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp ACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGGCCTTCCTGCAGTCTCTGGCGTGGTaGGCACCTCTTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TYPDNASSASSLGPWAFLQSLAW*APLPGP
Trigger: AGGGCCTGGAAGAGGTGCTCACCACGCCAGAGACTG...CAGGAAGGCCCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp AGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACACCCAGATGCGAACAGTaGGGTCATAGGAGGACGAGG +
Preference number: 4 (lower is better)
Translates to: RPSAGTRHSRILASSPATPRCEQ*GHRRTR
Trigger: CCTCGTCCTCCTATGACCTCACTGTTCGCATCTGGG...TGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp CTTTCCGGACTCGGGGCAGCCGGAAGGCCACAGGCTCCAGGGAGGACTGACGCACGATCAGCTCCAGCCTaGAGGTCCCAGATGCGAACA +
Preference number: 4 (lower is better)
Translates to: LSGLGAAGRPQAPGRTDARSAPA*RSQMRT
Trigger: TGTTCGCATCTGGGACCTTCAGGCTGGAGCTGATCG...TGCGTCAGTCCTCCCTGGAGCCTGTGGCCTTCCGGCTGCCCCGAGTCCGGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp TGGGCAGTGCCGTGTCGGGCAGGCGGCCAGGCTTCCGTAGCTCAAGCACAGCCACGATCAGCTCCAGCCTaGAGGTCCCAGATGCGAACA +
Preference number: 4 (lower is better)
Translates to: WAVPCRAGGQASVAQAQPRSAPA*RSQMRT
Trigger: TGTTCGCATCTGGGACCTTCAGGCTGGAGCTGATCG...TGGCTGTGCTTGAGCTACGGAAGCCTGGCCGCCTGCCCGACACGGCACTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp CTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCAGCCAGGCCTCGGCACTaGGCACAGGCTCCCAGATCA +
Preference number: 4 (lower is better)
Translates to: LSSGTATRSLLAQKPSLSARPRH*AQAPRS
Trigger: TGATCTGGGAGCCTGTGCTCAGTGCCGAGGCCTGGC...TGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp AGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGCAGGTGAGGTGGAGGTaGCGGGGGCGCAGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: RGDMCRGQRGIFQLEDEPQVRWR*RGRRLV
Trigger: GACTAGCCTGCGCCCCCGTCACCTCCACCTCACCTG...CGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCAGGTGAGGTGGAGGTaGCGGGGGCGCAGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSQVRWR*RGRRLV
Trigger: GACTAGCCTGCGCCCCCGTCACCTCCACCTCACCTG...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp CCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGTGGCAGGAGTGCAGGGGTaGCATGTGCCGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PKILDEANPGWDQPRSAVAGVQG*HVPGPE
Trigger: CTCTGGCCCCGGCACATGTCACCCCTGCACTCCTGC...CACTGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCGCAGGAGTGCAGGGGTaGCATGTGCCGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCAGVQG*HVPGPE
Trigger: CTCTGGCCCCGGCACATGTCACCCCTGCACTCCTGC...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp AGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGGCAGGAGTGCAGGGGTaGCATGTGCCGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: RGDMCRGQRGIFQLEDEPAGVQG*HVPGPE
Trigger: CTCTGGCCCCGGCACATGTCACCCCTGCACTCCTGC...CGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCGCAGGAGTGCAGGGGTaGCATGTGCCGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSAGVQG*HVPGPE
Trigger: CTCTGGCCCCGGCACATGTCACCCCTGCACTCCTGC...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp GGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGAACCAAAGATCCTGGATaGGGCCAATCCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GAQGHSGACRPAHAHPCRTKDPG*GQSRLG
Trigger: TCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGT...TCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp CTGCTGCCCATCAGGACTCCAGGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGGTCTCAGGTGCACGCTaGGCAACCGCGACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LLPIRTPGQAEDLVLVALVSGAR*ATATPA
Trigger: AGCGGGAGTCGCGGTTGCTCAGCGTGCACCTGAGAC...CAGGGCCACCAAGACCAGATCTTCAGCCTGGCCTGGAGTCCTGATGGGCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR TCA 90 bp TTGGCTGCCAGTGGGTGGAAGCGCAGGGAGCAGATCTTCTCCGTGTGGCCTGTGGTCTCAGGTGCACGCTaGGCAACCGCGACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LAASGWKRREQIFSVWPVVSGAR*ATATPA
Trigger: AGCGGGAGTCGCGGTTGCTCAGCGTGCACCTGAGAC...CACAGGCCACACGGAGAAGATCTGCTCCCTGCGCTTCCACCCACTGGCAGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR TCA 90 bp CTGCCCATCAGGACTCCAGGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGCAGGTCTCAGGTGCACGCTaGGCAACCGCGACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LPIRTPGQAEDLVLVALQVSGAR*ATATPA
Trigger: AGCGGGAGTCGCGGTTGCTCAGCGTGCACCTGAGAC...CTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGCCTGGAGTCCTGATGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR TCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCCCTGTCAGCCGAGCCTaGATGGCAGCCCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCPVSRA*MAAQVG
Trigger: GCCCACCTGGGCTGCCATTCAGGCTCGGCTGACAGG...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537233.6
ENST00000617235.2
CDS-3UTR GCA 90 bp CTGCGTCCCAGACCTTCACAGTGGTGCCTGCTGCGCTCACCAGAATGCCGTCAGGGCCGAGCCTCGGTGTaGCGGAACTTGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: LRPRPSQWCLLRSPECRQGRASV*RNLDTL
Trigger: CAGGGTGTCCAAGTTCCGGCACACCGAGGCTCGGCC...CTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGGACGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR GCA 90 bp AAACCCTCGCTTGCGTCTGCATCACCCACGGGTGTCTCCATCACCGCAGGCTGGGGCCGAGCCTCGGTGTaGCGGAACTTGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: KPSLASASPTGVSITAGWGRASV*RNLDTL
Trigger: CAGGGTGTCCAAGTTCCGGCACACCGAGGCTCGGCC...CCAGCCTGCGGTGATGGAGACACCCGTGGGTGATGCAGACGCAAGCGAGGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp GCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAACTGCGCTCACCAGAATaGCGTCAGAGGTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ATVGSWRPHQPQRGDGGQLRSPE*RQRWGG
Trigger: TCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAG...TTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576437.5
ENST00000632270.1
CDS-3UTR GCA 90 bp CACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCTCACAGTGGTGCCTGCTaGGCTCACCAGAATGCCGTC +
Preference number: 4 (lower is better)
Translates to: HSGACRPAHAHPCRQWPAHSGAC*AHQNAV
Trigger: GACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTG...AGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576437.5
ENST00000632270.1
CDS-3UTR GCA 90 bp AGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACACTTCACAGTGGTGCCTaGTGCGCTCACCAGAATGCC +
Preference number: 4 (lower is better)
Translates to: RPSAGTRHSRILASSPATLHSGA*CAHQNA
Trigger: GGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAG...TGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576437.5
ENST00000632270.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCAGACCTTCACAGTGGTaGCTGCTGCGCTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSRPSQW*LLRSPE
Trigger: TTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCT...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000614702.4
ENST00000617235.2
CDS-3UTR GCA 90 bp AGGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGAGGGGCTGCTGCTTGGCTaGGTCCCAGACCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: RAWPGPGSRQSFTVLSAEGLLLG*VPDLHS
Trigger: ACTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGCCC...CTCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR GCA 90 bp CCAGCTCTGTCAGGGGCTGCTGCTTGGCTGCGTCCCAGACCTTCACAGTGGTGCTCTGTCAGGGGCTGCTaGTTGGCTGCGTCCCAGACC +
Preference number: 4 (lower is better)
Translates to: PALSGAAAWLRPRPSQWCSVRGC*LAASQT
Trigger: GGTCTGGGACGCAGCCAAGCAGCAGCCCCTGACAGA...GCACCACTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGCCCCTGACAGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR GCA 90 bp TCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCATGTCCTTGCACGCCGTaGCCACCAGGGCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: SSPATARRWGSKGSQARSCPCTP*PPGLHL
Trigger: GAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGACA...TGATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR GCA 90 bp GCTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCTGTCCTTGCACGCCGTaGCCACCAGGGCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: AEQRHGHTQLVGTEAVTLCPCTP*PPGLHL
Trigger: GAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGACA...GAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCAGCAGCTGCTTGTCCTTaGACGCCGTGCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: LSSGTATRSLLAQKPSLSAAACP*TPCPPG
Trigger: CCCTGGTGGGCACGGCGTGCAAGGACAAGCAGCTGC...TGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCTCAAAGATCCGCAGCTaGTTGTCCTTGCACGCCGTG +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSSKIRS*LSLHAV
Trigger: CACGGCGTGCAAGGACAAGCAGCTGCGGATCTTTGA...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp GTGGCCCTGCAGCTTCAGCCGATCAGCTCCAGCCTGAAGGTCCCAGATGCGAACCAAGGTGCTCCCAGGTaGCCATCCATGCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: VALQLQPISSSLKVPDANQGAPR*PSMPAG
Trigger: GCCGGCTGGCATGGATGGGCACCTGGGAGCACCTTG...GTTCGCATCTGGGACCTTCAGGCTGGAGCTGATCGGCTGAAGCTGCAGGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp TCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCACCTCTCGCCCTTTCCTaGCAGGACCAGGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SSPATARRWGSKGSQARSPLALS*QDQEPR
Trigger: TCTGGGCTCCTGGTCCTGGCAGGAAAGGGCGAGAGG...TGATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CCGCCGGCCAGGGCCTCAGCTTCATATAGGAGCAGCTGGCGCTCACTTTGGCTGCCTCTCGCCCTTTCCTaGCAGGACCAGGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PPARASASYRSSWRSLWLPLALS*QDQEPR
Trigger: TCTGGGCTCCTGGTCCTGGCAGGAAAGGGCGAGAGG...CAGCCAAAGTGAGCGCCAGCTGCTCCTATATGAAGCTGAGGCCCTGGCCGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp TGGAACAGCAGGCAAGATGGGGCAGCGTGGGGTGACCAAAGATCCTGGATGAGGATGACGGCCAGCGCCTaGCGGGGCACAAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: WNSRQDGAAWGDQRSWMRMTASA*RGTRAA
Trigger: GGCTGCCCTTGTGCCCCGGCAGGCGCTGGCCGTCAT...CCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTGCCTGCTGTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp ACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGATGACGGCCAGCGCCTaGCGGGGCACAAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TCAGAREVSSSLRMSREVMTASA*RGTRAA
Trigger: GGCTGCCCTTGTGCCCCGGCAGGCGCTGGCCGTCAT...CACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp AGGTGTGGTGAGGTTGAGCCCCTTGAGGTTGGTGATGTGGCTGTCTCGGTGCAGATGACGGCCAGCGCCTaGCGGGGCACAAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RCGEVEPLEVGDVAVSVQMTASA*RGTRAA
Trigger: GGCTGCCCTTGTGCCCCGGCAGGCGCTGGCCGTCAT...CTGCACCGAGACAGCCACATCACCAACCTCAAGGGGCTCAACCTCACCACACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp AGCCCCACGCAGCACGCTCTCCAGGACACACTGGGTCACTGGGCTCAGCGCCGGTTGAGGCTGACCTTCTaGACCTGCTGGTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SPTQHALQDTLGHWAQRRLRLTF*TCWLSP
Trigger: TGGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAA...CCGGCGCTGAGCCCAGTGACCCAGTGTGTCCTGGAGAGCGTGCTGCGTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp GTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCACCCTCGCTTGCGTCTaGATCACCCACGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: VLTSHSEAMGVKGVPGQITLACV*ITHGCL
Trigger: GAGACACCCGTGGGTGATGCAGACGCAAGCGAGGGT...GATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CAGGAAGTGAAGCTCGGGTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGCAGAGAAACCCTCGCTTaGGTCTGCATCACCCACGGG +
Preference number: 4 (lower is better)
Translates to: QEVKLGWGRQAGLRLTFCRETLA*VCITHG
Trigger: CCCGTGGGTGATGCAGACGCAAGCGAGGGTTTCTCT...GCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp GCGACCATCACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGACAGCTGCCCCATTCTaGAGCGTGGGCAGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: ATITYPDNASSASSLGPWTAAPF*SVGSAV
Trigger: CACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGT...CCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GGTCTTGGTGGCCCTGCAGCTTCAGCCGATCAGCTCCAGCCTGAAGGTCCCAGACTCTTCCAGGCCCTCTaGGGGTACCCGCCACAGTCG +
Preference number: 4 (lower is better)
Translates to: GLGGPAASADQLQPEGPRLFQAL*GYPPQS
Trigger: CGACTGTGGCGGGTACCCGCAGAGGGCCTGGAAGAG...TCTGGGACCTTCAGGCTGGAGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp TGGAACAGCAGGCAAGATGGGGCAGCGTGGGGTGACCAAAGATCCTGGATGAGGGGCCCTGGGCCTTCCTaGAGGGGCTCAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: WNSRQDGAAWGDQRSWMRGPGPS*RGSGPL
Trigger: GAGTGGCCCTGAGCCCCTGCAGGAAGGCCCAGGGCC...CCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTGCCTGCTGTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp GACACCAGCAGACAGCGACCATCACATACCCAGACAATGCGAGCTCCGCGTCCTGGCCCTGGGCCTTCCTaGAGGGGCTCAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: DTSRQRPSHTQTMRAPRPGPGPS*RGSGPL
Trigger: GAGTGGCCCTGAGCCCCTGCAGGAAGGCCCAGGGCC...AGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGCTGTCTGCTGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTGTCCAGGCCCAACACTaGCAAGGGTCCGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGAREVSSSLRMSREVCTVQAQH*QGSAGQ
Trigger: CTGGCCGGCGGACCCTTGGCAGTGTTGGGCCTGGAC...AGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR GCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCGTCCAGGCCCAACACTaGCAAGGGTCCGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCVQAQH*QGSAGQ
Trigger: CTGGCCGGCGGACCCTTGGCAGTGTTGGGCCTGGAC...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR GCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCGTCCAGGCCCAACACTaGCAAGGGTCCGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSVQAQH*QGSAGQ
Trigger: CTGGCCGGCGGACCCTTGGCAGTGTTGGGCCTGGAC...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR GCA 90 bp AGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGGTCCAGGCCCAACACTaGCAAGGGTCCGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: RGDMCRGQRGIFQLEDEPVQAQH*QGSAGQ
Trigger: CTGGCCGGCGGACCCTTGGCAGTGTTGGGCCTGGAC...CGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR GCA 90 bp GGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCACGGGTGTCGCCCTTaGCGGTCAGGAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GDQRSWMRPIQAGTSPGQHGCRP*RSGAPG
Trigger: GCCTGGTGCTCCTGACCGGCAAGGGCGACACCCGTG...CTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCCACGGGTGTCGCCCTTaGCGGTCAGGAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCHGCRP*RSGAPG
Trigger: GCCTGGTGCTCCTGACCGGCAAGGGCGACACCCGTG...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR GCA 90 bp CCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGTGCACGGGTGTCGCCCTTaGCGGTCAGGAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: PKILDEANPGWDQPRSAVHGCRP*RSGAPG
Trigger: GCCTGGTGCTCCTGACCGGCAAGGGCGACACCCGTG...CACTGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCCCGGTTCCCCAGTTTTaGCACCATGGCATTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSPVPQF*HHGIQQ
Trigger: CTGCTGAATGCCATGGTGGCAAAACTGGGGAACCGG...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCATGAGCCGTGAGGTGTaGACTAGGAAGTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSMSREV*TRKWQH
Trigger: GTGCTGCCACTTCCTAGTGCACACCTCACGGCTCAT...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp CACTCGTCCTCGTCCACGCCTTCAAAGGAGTCCTGGGGGAGTGGGTCCTCCCGGTGCAGGGGTGACATGTaGCGGGGCCAGAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: HSSSSTPSKESWGSGSSRCRGDM*RGQRGI
Trigger: GATACCTCTCTGGCCCCGGCACATGTCACCCCTGCA...CCGGGAGGACCCACTCCCCCAGGACTCCTTTGAAGGCGTGGACGAGGACGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR GCA 90 bp GGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGCAGCTTCAGCCGATCAGCTCCAACATCCAAGGCAGGTaGGGGCCAGTCCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: GQAEDLVLVALQLQPISSNIQGR*GPVPAG
Trigger: CCCCGCAGGGACTGGCCCGCACCTGCCTTGGATGTT...GGAGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GCCGGGCTTCGGATCCCAGCTCCACCACTTACACAGCTGTGTGACCCGGGCAGGCAGGTCCCCATGGGCTaGCAGCTCAGAATGCCGTCA +
Preference number: 4 (lower is better)
Translates to: AGLRIPAPPLTQLCDPGRQVPMG*QLRMPS
Trigger: TGACGGCATTCTGAGCTGGCAGCCCATGGGGACCTG...CCTGCCCGGGTCACACAGCTGTGTAAGTGGTGGAGCTGGGATCCGAAGCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571756.5
ENST00000633681.1
CDS-3UTR GCA 90 bp CACCCAAGCGAGGTGTCCAAGGTGAGGGAGGCCAGGGCGCTGGAGAAGAACCGCCAGGTCCCCATGGGCTaGCAGCTCAGAATGCCGTCA +
Preference number: 4 (lower is better)
Translates to: HPSEVSKVREARALEKNRQVPMG*QLRMPS
Trigger: TGACGGCATTCTGAGCTGGCAGCCCATGGGGACCTG...GCGGTTCTTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp GCTGCCAGCTCTGTCAGGGGCTGCTGCTTGGCTGCGTCCCAGACCTTCACAGTGTCACCTTGCACGCCGTaGCCACCAGGGCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: AASSVRGCCLAASQTFTVSPCTP*PPGLHL
Trigger: GAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGTGA...CACTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGCCCCTGACAGAGCTGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR GCA 90 bp CTGCAGCTTCAGCCGATCAGCTCCAGCCTGAAGGTCCCAGATGCGAACAGTGAGCTTTGGGGCTCCACCTaGTCAGGCTCGCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LQLQPISSSLKVPDANSELWGST*SGSRRG
Trigger: GCCCCGCCGCGAGCCTGAGCAGGTGGAGCCCCAAAG...CTCACTGTTCGCATCTGGGACCTTCAGGCTGGAGCTGATCGGCTGAAGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp CAGGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGAGTGACTAGGTCTGAATaGCAGCCCAGGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: QGLARPWQSPEFYRPVSRVTRSE*QPRWAT
Trigger: CGTGGCCCACCTGGGCTGCCATTCAGACCTAGTCAC...TCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000572153.5
ENST00000632167.1
ENST00000633889.1
CDS-3UTR CCA 90 bp GTGGCCCTGCAGCTTCAGCCGATCAGCTCCAGCCTGAAGGTCCCAGATGCGAACCTGCAGTACCTCCACTaGGAGGTCCTCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VALQLQPISSSLKVPDANLQYLH*EVLGAQ
Trigger: CTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAG...GTTCGCATCTGGGACCTTCAGGCTGGAGCTGATCGGCTGAAGCTGCAGGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR CCA 90 bp TCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCGTCAGAGGTGGGGTaGAACTGCAGTACCTCCACT +
Preference number: 4 (lower is better)
Translates to: SWRPHQPQRGDGGQRGPRPSEVG*NCSTST
Trigger: AGTGGAGGTACTGCAGTTCCACCCCACCTCTGACGG...CCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR CCA 90 bp CGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCCCGCGGCTTTGTTCTaGGGTCAAAGATCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RILASSPATARRWGSKGSPAALF*GQRSAA
Trigger: AGCTGCGGATCTTTGACCCCAGAACAAAGCCGCGGG...GGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR CCA 90 bp AGGGCAGCCCCACGCAGCACGCTCTCCAGGACACACTGGGTCACTGGGCTCAGCCCCGCGGCTTTGTTCTaGGGTCAAAGATCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RAAPRSTLSRTHWVTGLSPAALF*GQRSAA
Trigger: AGCTGCGGATCTTTGACCCCAGAACAAAGCCGCGGG...GCTGAGCCCAGTGACCCAGTGTGTCCTGGAGAGCGTGCTGCGTGGGGCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCGGGAGGCCAGGGCGCTaGAGAAGAACCGCGTGTCCC +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCGRPGR*RRTACP
Trigger: GGGACACGCGGTTCTTCTCCAGCGCCCTGGCCTCCC...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR CCA 90 bp AGAAACCCTCGCTTGCGTCTGCATCACCCACGGGTGTCTCCATCACCGCAGGCTGGGAGGCCAGGGCGCTaGAGAAGAACCGCGTGTCCC +
Preference number: 4 (lower is better)
Translates to: RNPRLRLHHPRVSPSPQAGRPGR*RRTACP
Trigger: GGGACACGCGGTTCTTCTCCAGCGCCCTGGCCTCCC...AGCCTGCGGTGATGGAGACACCCGTGGGTGATGCAGACGCAAGCGAGGGTTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCGGGAGGCCAGGGCGCTaGAGAAGAACCGCGTGTCCC +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSGRPGR*RRTACP
Trigger: GGGACACGCGGTTCTTCTCCAGCGCCCTGGCCTCCC...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR CCA 90 bp ACATTGGCTGCCAGTGGGTGGAAGCGCAGGGAGCAGATCTTCTCCGTGTGGCCTGGGAGGCCAGGGCGCTaGAGAAGAACCGCGTGTCCC +
Preference number: 4 (lower is better)
Translates to: TLAASGWKRREQIFSVWPGRPGR*RRTACP
Trigger: GGGACACGCGGTTCTTCTCCAGCGCCCTGGCCTCCC...AGGCCACACGGAGAAGATCTGCTCCCTGCGCTTCCACCCACTGGCAGCCAATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTGGGAGGCCAGGGCGCTaGAGAAGAACCGCGTGTCCC +
Preference number: 4 (lower is better)
Translates to: AGAREVSSSLRMSREVCTGRPGR*RRTACP
Trigger: GGGACACGCGGTTCTTCTCCAGCGCCCTGGCCTCCC...AGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR CCA 90 bp GGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGGGGAGGCCAGGGCGCTaGAGAAGAACCGCGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GDQRSWMRPIQAGTSPGQGRPGR*RRTACP
Trigger: GGGACACGCGGTTCTTCTCCAGCGCCCTGGCCTCCC...CTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp GACCTCAAACTGGGGCTGGTCCCGATGCCACTGGTGCTGGAGAGTGAGGGCCCCGGGAACAGGTCCTCGTaGAACTCCACAGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: DLKLGLVPMPLVLESEGPGNRSS*NSTALR
Trigger: CCGCAAGGCTGTGGAGTTCCACGAGGACCTGTTCCC...GGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp CACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCTGGGAACAGGTCCTCGTaGAACTCCACAGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: HSGACRPAHAHPCRQWPAGNRSS*NSTALR
Trigger: CCGCAAGGCTGTGGAGTTCCACGAGGACCTGTTCCC...AGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GCCGGGCTTCGGATCCCAGCTCCACCACTTACACAGCTGTGTGACCCGGGCAGGGGGAACAGGTCCTCGTaGAACTCCACAGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: AGLRIPAPPLTQLCDPGRGNRSS*NSTALR
Trigger: CCGCAAGGCTGTGGAGTTCCACGAGGACCTGTTCCC...CCTGCCCGGGTCACACAGCTGTGTAAGTGGTGGAGCTGGGATCCGAAGCCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571756.5
ENST00000633681.1
CDS-3UTR CCA 90 bp AGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCACCAGGTAGCTATGGGGGTCGGTaGCAGGCACACAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: SGTATRSLLAQKPSLSPGSYGGR*QAHSRQ
Trigger: CTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGCT...ACCTGGTGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GGTCTTGGTGGCCCTGCAGCTTCAGCCGATCAGCTCCAGCCTGAAGGTCCCAGACCAGCCCACCAGCTATaGGGGTCGGTGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: GLGGPAASADQLQPEGPRPAHQL*GSVAGT
Trigger: TGTGCCTGCCACCGACCCCCATAGCTGGTGGGCTGG...TCTGGGACCTTCAGGCTGGAGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCGTGGAACTACCTTCTGCACCTGCTaGTTGTCCCCAGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: GRWQAHSRQCPGTGPRGTTFCTC*LSPAHQ
Trigger: CTGGTGGGCTGGGGACAACCAGCAGGTGCAGAAGGT...AGTTCCACGAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGGAAGTGAAGCTCGGGTaGGGCCGGCAGGCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GDQRSWMRPIQAGTSPGQEVKLG*GRQAGL
Trigger: CAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTC...CTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp ACGATGGCTGTGTCGCTCAGCTGTAGGACGCGGAGTACCTCGCAGCTCATGACGGAAGTGAAGCTCGGGTaGGGCCGGCAGGCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: TMAVSLSCRTRSTSQLMTEVKLG*GRQAGL
Trigger: CAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTC...CGTCATGAGCTGCGAGGTACTCCGCGTCCTACAGCTGAGCGACACAGCCATCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp ACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCACCAGGTGTGGTGGAAGTGAAGCTCGGGTaGGGCCGGCAGGCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: TATRSLLAQKPSLSPGVVEVKLG*GRQAGL
Trigger: CAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTC...CACCACACCTGGTGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp CTTGGTGGCCCTGCAGCTTCAGCCGATCAGCTCCAGCCTGAAGGTCCCAGATGCTCCATCACCGCAGGCTaGGCTGTGTCAGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LGGPAASADQLQPEGPRCSITAG*AVSGRG
Trigger: GCCCCTCCCTGACACAGCCCAGCCTGCGGTGATGGA...GCATCTGGGACCTTCAGGCTGGAGCTGATCGGCTGAAGCTGCAGGGCCACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTCCAGGCTGGAGGGCGTaGAGGGCGAGGTCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: AGAREVSSSLRMSREVCTPGWRA*RARSAN
Trigger: GTTCGCTGACCTCGCCCTCCACGCCCTCCAGCCTGG...AGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR CCA 90 bp AGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGCCAGGCTGGAGGGCGTaGAGGGCGAGGTCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: RGDMCRGQRGIFQLEDEPPGWRA*RARSAN
Trigger: GTTCGCTGACCTCGCCCTCCACGCCCTCCAGCCTGG...CGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR CCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCCCAGGCTGGAGGGCGTaGAGGGCGAGGTCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCPGWRA*RARSAN
Trigger: GTTCGCTGACCTCGCCCTCCACGCCCTCCAGCCTGG...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR CCA 90 bp ACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGGCCTTCCTGTGGTCCCGATGCCACTaGTGCTGGAGAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TYPDNASSASSLGPWAFLWSRCH*CWRVRA
Trigger: GGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCA...CAGGAAGGCCCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp AGGCCAGATCAGTCACAGCTGCCCCATTCTGCAGCGTGGGCAGTGCCGTGTCGGTGGTCCCGATGCCACTaGTGCTGGAGAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RPDQSQLPHSAAWAVPCRWSRCH*CWRVRA
Trigger: GGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCA...CCGACACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp CGACCATCACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGGTGGTCCCGATGCCACTaGTGCTGGAGAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RPSHTQTMRAPRPPLGPGWSRCH*CWRVRA
Trigger: GGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCA...CCCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp ACAGGAAGTGAAGCTCGGGTGGGGCCGGCAGGCGGGGTTGAGGCTGACCTTCTGACCTCAAACTGGGGCTaGTCCCGATGCCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: TGSEARVGPAGGVEADLLTSNWG*SRCHWC
Trigger: GCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGT...CAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GCCCAGAGTCAGGGTCCAGCAGAGGCACGAGACACCCAAGCGAGGTGTCCAAGGGGCGGAACTTGGAACTaGGGCCCAGCAGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AQSQGPAEARDTQARCPRGGTWN*GPAGSA
Trigger: TGCAGAGCCTGCTGGGCCCCAGTTCCAAGTTCCGCC...CCTTGGACACCTCGCTTGGGTGTCTCGTGCCTCTGCTGGACCCTGACTCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp CCATCACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGGCCTGGCGGAACTTGGAACTaGGGCCCAGCAGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PSHTQTMRAPRPPLGPGPGGTWN*GPAGSA
Trigger: TGCAGAGCCTGCTGGGCCCCAGTTCCAAGTTCCGCC...AGGCCCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GCAGGGGCTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCTTGAGGTTGGTGATGTaGCTGTCTCGGTGCAGGACA +
Preference number: 4 (lower is better)
Translates to: AGAQGHSGACRPAHAHPCLRLVM*LSRCRT
Trigger: TGTCCTGCACCGAGACAGCCACATCACCAACCTCAA...GCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR CCA 90 bp GGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGCAGCTTCAGCCGATCAGCTCCCCCCATTCTGCAGCGTaGGCAGTGCCGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: GQAEDLVLVALQLQPISSPHSAA*AVPCRA
Trigger: TGCCCGACACGGCACTGCCCACGCTGCAGAATGGGG...GGAGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR CCA 90 bp AGCCGATGGGCACGATGGCTGTGTCGCTCAGCTGTAGGACGCGGAGTACCTCGCGCCACAGTCGGATCCTaGCGTCCTCACCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: SRWARWLCRSAVGRGVPRATVGS*RPHQPQ
Trigger: CTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGC...GCGAGGTACTCCGCGTCCTACAGCTGAGCGACACAGCCATCGTGCCCATCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCCTGAAGATCTGGTCTTaGTGGCCCTGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSLKIWS*WPCSFS
Trigger: GCTGAAGCTGCAGGGCCACCAAGACCAGATCTTCAG...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp GTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCGCCAGGCTGAAGATCTaGTCTTGGTGGCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VLTSHSEAMGVKGVPGQIARLKI*SWWPCS
Trigger: GCTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGC...GATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR CCA 90 bp CTGAGAAGCCAGGGCTGCCCATTAGCGCCTTGCAGCCAGGCCTCGGCACTGAGCTGTCTGGGTCGTAGCTaGGCAGCAGGGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LRSQGCPLAPCSQASALSCLGRS*AAGLRE
Trigger: CTCCCTCAACCCTGCTGCCCAGCTACGACCCAGACA...GCTCAGTGCCGAGGCCTGGCTGCAAGGCGCTAATGGGCAGCCCTGGCTTCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp GCTGCTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTAGGACGAGGCCCTTGTaGGGGTCAGGCGACGTGAAG +
Preference number: 4 (lower is better)
Translates to: AAEQRHGHTQLVGTEAVTRTRPL*GSGDVK
Trigger: CTTCACGTCGCCTGACCCCCACAAGGGCCTCGTCCT...AGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCGGAGTCCTGGGGGAGTaGGTCCTCCCGGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSGVLGE*VLPVPQ
Trigger: CTGGGGAACCGGGAGGACCCACTCCCCCAGGACTCC...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR CCA 90 bp GCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTGGAGTCCTGGGGGAGTaGGTCCTCCCGGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: AGAREVSSSLRMSREVCTGVLGE*VLPVPQ
Trigger: CTGGGGAACCGGGAGGACCCACTCCCCCAGGACTCC...AGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR CCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCGGAGTCCTGGGGGAGTaGGTCCTCCCGGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCGVLGE*VLPVPQ
Trigger: CTGGGGAACCGGGAGGACCCACTCCCCCAGGACTCC...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR CCA 90 bp GGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGGGAGTCCTGGGGGAGTaGGTCCTCCCGGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GDQRSWMRPIQAGTSPGQGVLGE*VLPVPQ
Trigger: CTGGGGAACCGGGAGGACCCACTCCCCCAGGACTCC...CTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp AGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGGGAGTCCTGGGGGAGTaGGTCCTCCCGGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RGDMCRGQRGIFQLEDEPGVLGE*VLPVPQ
Trigger: CTGGGGAACCGGGAGGACCCACTCCCCCAGGACTCC...CGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR CCA 90 bp GTGGGTCCTCCCGGTTCCCCAGTTTTGCCACCATGGCATTCAGCAGCTCCTCCTGGAGTCCTGGGGGAGTaGGTCCTCCCGGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VGPPGSPVLPPWHSAAPPGVLGE*VLPVPQ
Trigger: CTGGGGAACCGGGAGGACCCACTCCCCCAGGACTCC...AGGAGGAGCTGCTGAATGCCATGGTGGCAAAACTGGGGAACCGGGAGGACCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR CCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCGCCCTTGACCAGAACTaGAACAGCAGGCAAGATGGG +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSALDQN*NSRQDG
Trigger: CCCATCTTGCCTGCTGTTCCAGTTCTGGTCAAGGGC...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp GGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGCCACAGTCCTGGCTACAAACCTaGGAAGTAGGGCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GPLRVPATVGSWRPHQPQSWLQT*EVGQLV
Trigger: GACCAGCTGCCCTACTTCCCAGGTTTGTAGCCAGGA...CTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp TTCCCGCACGTCGCACTCCGTCTTAGGCAGGAGGACGAGGCCCTTGTGGGGGTCTGCACCAGGTCCCCATaGGCTGCCAGCTCAGAATGC +
Preference number: 4 (lower is better)
Translates to: FPHVALRLRQEDEALVGVCTRSP*AASSEC
Trigger: GCATTCTGAGCTGGCAGCCCATGGGGACCTGGTGCA...GACCCCCACAAGGGCCTCGTCCTCCTGCCTAAGACGGAGTGCGACGTGCGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp CACCCAAGCGAGGTGTCCAAGGTGAGGGAGGCCAGGGCGCTGGAGAAGAACCGCTGCACCAGGTCCCCATaGGCTGCCAGCTCAGAATGC +
Preference number: 4 (lower is better)
Translates to: HPSEVSKVREARALEKNRCTRSP*AASSEC
Trigger: GCATTCTGAGCTGGCAGCCCATGGGGACCTGGTGCA...GCGGTTCTTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp CACCTGTCCCCCGCTGCTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGGCTCAGCAATTCTTTaGGGCTCCACCTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: HLSPAAEQRHGHTQLVGTGSAIL*GSTCSG
Trigger: GCCTGAGCAGGTGGAGCCCCAAAGAATTGCTGAGCC...TGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp TCGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCGGGTCTCCCGGCACCTaGCTCAGCAATTCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: SDPGVLTSHSEAMGVKGVGSPGT*LSNSLG
Trigger: CCCCAAAGAATTGCTGAGCCAGGTGCCGGGAGACCC...GACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp AACAGTACAGCTGCCTCTCGCCCTTTCCTGCCAGGACCAGGAGCCCAGAGTCAGGCAGCCCTGGTGGGGTaGGGCCCTCACCTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: NSTAASRPFLPGPGAQSQAALVG*GPHLKH
Trigger: GTGCTTGAGGTGAGGGCCCCACCCCACCAGGGCTGC...CTGACTCTGGGCTCCTGGTCCTGGCAGGAAAGGGCGAGAGGCAGCTGTACTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571756.5
ENST00000633681.1
CDS-3UTR CCA 90 bp ACACTGGGTCACTGGGCTCAGCGCCGGCTGCTGCGGGACCACCTCGTAACAGTACCCATGGCAGGTGGCTaGGAGGATCACAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: TLGHWAQRRLLRDHLVTVPMAGG*EDHRTG
Trigger: GCCTGTCCTGTGATCCTCCCAGCCACCTGCCATGGG...TACTGTTACGAGGTGGTCCCGCAGCAGCCGGCGCTGAGCCCAGTGACCCAGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571756.5
ENST00000633681.1
CDS-3UTR CCA 90 bp ACACCCAAGCGAGGTGTCCAAGGTGAGGGAGGCCAGGGCGCTGGAGAAGAACCGCCCATGGCAGGTGGCTaGGAGGATCACAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: TPKRGVQGEGGQGAGEEPPMAGG*EDHRTG
Trigger: GCCTGTCCTGTGATCCTCCCAGCCACCTGCCATGGG...CGGTTCTTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571756.5
ENST00000633681.1
3UTR CAA 72 bp CAGGTGGGCCACGCGTCGCTTGTCCTCTCCTTGGCCTaGCAGAGGCACAATGCCCAGTACACCAGGACGGTC +
Preference number: 4 (lower is better)
Translates to: QVGHASLVLSLA*QRHNAQYTRTV
Trigger: GACCGTCCTGGTGTACTGGGCATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCGACGCGTGGCCCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR TCA 90 bp AGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCACCAGGTCTGCTCGAATGTCACTaGTCCAGGACTCGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: SGTATRSLLAQKPSLSPGLLECH*SRTRGG
Trigger: CCCGCCGCGAGTCCTGGATCAGTGACATTCGAGCAG...ACCTGGTGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571756.5
ENST00000633681.1
CDS-3UTR TCA 90 bp GCTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCCAGGACGGTCGGAGTTaGAGGCGATCAAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AEQRHGHTQLVGTEAVTLQDGRS*RRSSCS
Trigger: GCTGCAGCTTGATCGCCTTCAACTCCGACCGTCCTG...GAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp AGCCCCACGCAGCACGCTCTCCAGGACACACTGGGTCACTGGGCTCAGCGCCGGAGAAGTCCAAGTCGGTaGCTAGGTCTGAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: SPTQHALQDTLGHWAQRRRSPSR*LGLNGS
Trigger: GCTGCCATTCAGACCTAGTCACCGACTTGGACTTCT...CCGGCGCTGAGCCCAGTGACCCAGTGTGTCCTGGAGAGCGTGCTGCGTGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp CCCGCCACCCTGCACCCCTGGCCACATGCTAGCGGGCAGCTGATGAGCAGCAGCAGAAGTCCAAGTCGGTaGCTAGGTCTGAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: PATLHPWPHASGQLMSSSRSPSR*LGLNGS
Trigger: GCTGCCATTCAGACCTAGTCACCGACTTGGACTTCT...GCTGCTGCTCATCAGCTGCCCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251166.9
ENST00000571227.5
ENST00000614702.4
ENST00000632167.1
CDS-3UTR TCA 90 bp GCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTTGGGCCTGCGTGCTCTaGGAGGCCCGCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: AGAREVSSSLRMSREVCTWACVL*EARGFV
Trigger: AACAAAGCCGCGGGCCTCTCAGAGCACGCAGGCCCA...AGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCTGGGCCTGCGTGCTCTaGGAGGCCCGCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSWACVL*EARGFV
Trigger: AACAAAGCCGCGGGCCTCTCAGAGCACGCAGGCCCA...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp AGCTCCAGCCTGAAGGTCCCAGATGCGAACAGTGAGGTCATAGGAGGACGAGGCGCACCAGACAGGAAGTaGAGCTCGGGTGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SSSLKVPDANSEVIGGRGAPDRK*SSGGAG
Trigger: GCCGGCCCCACCCGAGCTTCACTTCCTGTCTGGTGC...GCCTCGTCCTCCTATGACCTCACTGTTCGCATCTGGGACCTTCAGGCTGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGCACCAGACAGGAAGTaGAGCTCGGGTGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: VTCAGAREVSSSLRMSREAPDRK*SSGGAG
Trigger: GCCGGCCCCACCCGAGCTTCACTTCCTGTCTGGTGC...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp GGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCGTGGAACTTGCAGGACAGTGCCCTaGGCATGGCGGAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: GRWQAHSRQCPGTGPRGTCRTVP*AWRNLE
Trigger: TTCCAAGTTCCGCCATGCTCAGGGCACTGTCCTGCA...AGTTCCACGAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR TCA 90 bp GAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTAGGAAGTGGCAGCCTGTCCCCCGCTGCTaGGCAGCGGCACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: EVSSSLRMSREVCTRKWQPVPRC*AAARPH
Trigger: GTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGG...CTGCCACTTCCTAGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp AGCGACCATCACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGCAGTCTCTGGCGTGGTaGGCACCTCTTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SDHHIPRQCELRVLPWALQSLAW*APLPGP
Trigger: AGGGCCTGGAAGAGGTGCTCACCACGCCAGAGACTG...CAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp CTGCCCATCAGGACTCCAGGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGCAGTCTCCGTGTGGCCTGTaGGCACAGTCTCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LPIRTPGQAEDLVLVALQSPCGL*AQSLAW
Trigger: CCACGCCAGAGACTGTGCTCACAGGCCACACGGAGA...CTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGCCTGGAGTCCTGATGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp CACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCTCCCAGATGCGAACAGTaGGGTCATAGGAGGACGAGG +
Preference number: 4 (lower is better)
Translates to: HSGACRPAHAHPCRQWPAPRCEQ*GHRRTR
Trigger: CCTCGTCCTCCTATGACCTCACTGTTCGCATCTGGG...AGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp TCGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCCAGATGCGAACAGTaGGGTCATAGGAGGACGAGG +
Preference number: 4 (lower is better)
Translates to: SDPGVLTSHSEAMGVKGVPRCEQ*GHRRTR
Trigger: CCTCGTCCTCCTATGACCTCACTGTTCGCATCTGGG...GACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp CACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCTCGATCAGCTCCAGCCTaGAGGTCCCAGATGCGAACA +
Preference number: 4 (lower is better)
Translates to: HSGACRPAHAHPCRQWPARSAPA*RSQMRT
Trigger: TGTTCGCATCTGGGACCTTCAGGCTGGAGCTGATCG...AGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp CTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTCGATCAGCTCCAGCCTaGAGGTCCCAGATGCGAACA +
Preference number: 4 (lower is better)
Translates to: LRATPGPVDPHTPILADSRSAPA*RSQMRT
Trigger: TGTTCGCATCTGGGACCTTCAGGCTGGAGCTGATCG...ACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR TCA 90 bp CGACCATCACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGGGACTCCAGGCCAGGCTaGAGATCTGGTCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RPSHTQTMRAPRPPLGPGDSRPG*RSGLGG
Trigger: GCCACCAAGACCAGATCTTCAGCCTGGCCTGGAGTC...CCCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR TCA 90 bp GAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTAGGAAGTGGCAGGGCTCCAGGGAGGACTaGCGCAGCCGCAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: EVSSSLRMSREVCTRKWQGSRED*RSRRHR
Trigger: GCGGTGCCTGCGGCTGCGTCAGTCCTCCCTGGAGCC...CTGCCACTTCCTAGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp AGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGGCCAGGCCTCGGCACTaGGCACAGGCTCCCAGATCA +
Preference number: 4 (lower is better)
Translates to: RGDMCRGQRGIFQLEDEPARPRH*AQAPRS
Trigger: TGATCTGGGAGCCTGTGCTCAGTGCCGAGGCCTGGC...CGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp GGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGGCCAGGCCTCGGCACTaGGCACAGGCTCCCAGATCA +
Preference number: 4 (lower is better)
Translates to: GDQRSWMRPIQAGTSPGQARPRH*AQAPRS
Trigger: TGATCTGGGAGCCTGTGCTCAGTGCCGAGGCCTGGC...CTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR TCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCTTCCAGGTACTGCGCTaGGGATGGGGCCCGACGAGC +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSFQVLR*GWGPTS
Trigger: GCTCGTCGGGCCCCATCCTCAGCGCAGTACCTGGAA...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp GCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTTTCCAGGTACTGCGCTaGGGATGGGGCCCGACGAGC +
Preference number: 4 (lower is better)
Translates to: AGAREVSSSLRMSREVCTFQVLR*GWGPTS
Trigger: GCTCGTCGGGCCCCATCCTCAGCGCAGTACCTGGAA...AGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp AGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTTCCAGGTACTGCGCTaGGGATGGGGCCCGACGAGC +
Preference number: 4 (lower is better)
Translates to: RGDMCRGQRGIFQLEDEPFQVLR*GWGPTS
Trigger: GCTCGTCGGGCCCCATCCTCAGCGCAGTACCTGGAA...CGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp TGGGTCCTCCCGGTTCCCCAGTTTTGCCACCATGGCATTCAGCAGCTCCTCCTTCAGGTGAGGTGGAGGTaGCGGGGGCGCAGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: WVLPVPQFCHHGIQQLLLQVRWR*RGRRLV
Trigger: GACTAGCCTGCGCCCCCGTCACCTCCACCTCACCTG...AAGGAGGAGCTGCTGAATGCCATGGTGGCAAAACTGGGGAACCGGGAGGACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576637.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGCAGGAGTGCAGGGGTaGCATGTGCCGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: VTCAGAREVSSSLRMSREAGVQG*HVPGPE
Trigger: CTCTGGCCCCGGCACATGTCACCCCTGCACTCCTGC...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp ACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGGCAGGAGTGCAGGGGTaGCATGTGCCGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TCAGAREVSSSLRMSREVAGVQG*HVPGPE
Trigger: CTCTGGCCCCGGCACATGTCACCCCTGCACTCCTGC...CACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR TCA 90 bp GCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTGTCTCAGGTGCACGCTaGGCAACCGCGACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: AGAREVSSSLRMSREVCTVSGAR*ATATPA
Trigger: AGCGGGAGTCGCGGTTGCTCAGCGTGCACCTGAGAC...AGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCGTCTCAGGTGCACGCTaGGCAACCGCGACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCVSGAR*ATATPA
Trigger: AGCGGGAGTCGCGGTTGCTCAGCGTGCACCTGAGAC...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCGTCTCAGGTGCACGCTaGGCAACCGCGACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSVSGAR*ATATPA
Trigger: AGCGGGAGTCGCGGTTGCTCAGCGTGCACCTGAGAC...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR TCA 90 bp ACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGCCTGTCAGCCGAGCCTaGATGGCAGCCCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: TCAGAREVSSSLRMSREVPVSRA*MAAQVG
Trigger: GCCCACCTGGGCTGCCATTCAGGCTCGGCTGACAGG...CACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537233.6
ENST00000617235.2
CDS-3UTR GCA 90 bp GGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGGCGTCGGGTCTCAGGTaGACGCTGAGCAACCGCGAC +
Preference number: 4 (lower is better)
Translates to: GDQRSWMRPIQAGTSPGQASGLR*TLSNRD
Trigger: GTCGCGGTTGCTCAGCGTGCACCTGAGACCCGACGC...CTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp GGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGGGCCGAGCCTCGGTGTaGCGGAACTTGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: GDQRSWMRPIQAGTSPGQGRASV*RNLDTL
Trigger: CAGGGTGTCCAAGTTCCGGCACACCGAGGCTCGGCC...CTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp GCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTGGCCGAGCCTCGGTGTaGCGGAACTTGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: AGAREVSSSLRMSREVCTGRASV*RNLDTL
Trigger: CAGGGTGTCCAAGTTCCGGCACACCGAGGCTCGGCC...AGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp GGACTGACGCAGCCGCAGGCACCGCATCAGCTCCACTTCCCGCACGTCGCACTCCTTGCAGAGGCACAATaGCCAGTACACCAGGACGGT +
Preference number: 4 (lower is better)
Translates to: GLTQPQAPHQLHFPHVALLAEAQ*PVHQDG
Trigger: ACCGTCCTGGTGTACTGGGCATTGTGCCTCTGCAAG...GAGTGCGACGTGCGGGAAGTGGAGCTGATGCGGTGCCTGCGGCTGCGTCAGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GGGCTGCCAGCTCTGTCAGGGGCTGCTGCTTGGCTGCGTCCCAGACCTTCACAGCTTCACAGTGGTGCCTaGTGCGCTCACCAGAATGCC +
Preference number: 4 (lower is better)
Translates to: GLPALSGAAAWLRPRPSQLHSGA*CAHQNA
Trigger: GGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAG...CTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGCCCCTGACAGAGCTGGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR GCA 90 bp CAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGAGACCTTCACAGTGGTaGCTGCTGCGCTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: QGHSGACRPAHAHPCRQWRPSQW*LLRSPE
Trigger: TTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCT...CCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576437.5
ENST00000632270.1
CDS-3UTR GCA 90 bp GCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTCAGGTCCCCATGGGCTaGCAGCTCTGTCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AGAREVSSSLRMSREVCTQVPMG*QLCQGL
Trigger: CAGCCCCTGACAGAGCTGGCAGCCCATGGGGACCTG...AGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000614702.4
ENST00000617235.2
CDS-3UTR GCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCAGGTCCCCATGGGCTaGCAGCTCTGTCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSQVPMG*QLCQGL
Trigger: CAGCCCCTGACAGAGCTGGCAGCCCATGGGGACCTG...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000614702.4
ENST00000617235.2
CDS-3UTR GCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCCTCCAGACGGCGCTCTaGACCAGGTCCCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCLQTAL*TRSPWA
Trigger: AGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAG...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp AACAGTACAGCTGCCTCTCGCCCTTTCCTGCCAGGACCAGGAGCCCAGAGTCAGCTCCAGACGGCGCTCTaGACCAGGTCCCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: NSTAASRPFLPGPGAQSQLQTAL*TRSPWA
Trigger: AGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAG...CTGACTCTGGGCTCCTGGTCCTGGCAGGAAAGGGCGAGAGGCAGCTGTACTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGTGGCAGCTGCTTGTCCTTaGACGCCGTGCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PKILDEANPGWDQPRSAVAAACP*TPCPPG
Trigger: CCCTGGTGGGCACGGCGTGCAAGGACAAGCAGCTGC...CACTGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp AGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGGCAGCTGCTTGTCCTTaGACGCCGTGCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: RGDMCRGQRGIFQLEDEPAAACP*TPCPPG
Trigger: CCCTGGTGGGCACGGCGTGCAAGGACAAGCAGCTGC...CGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCGCAGCTGCTTGTCCTTaGACGCCGTGCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCAAACP*TPCPPG
Trigger: CCCTGGTGGGCACGGCGTGCAAGGACAAGCAGCTGC...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp GGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGGCAGCTGCTTGTCCTTaGACGCCGTGCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: GDQRSWMRPIQAGTSPGQAAACP*TPCPPG
Trigger: CCCTGGTGGGCACGGCGTGCAAGGACAAGCAGCTGC...CTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp CTTCCAGGCCCTCTGCGGGTACCCGCCACAGTCGGATCCTGGCGTCCTCACCAGTCAAAGATCCGCAGCTaGTTGTCCTTGCACGCCGTG +
Preference number: 4 (lower is better)
Translates to: LPGPLRVPATVGSWRPHQSKIRS*LSLHAV
Trigger: CACGGCGTGCAAGGACAAGCAGCTGCGGATCTTTGA...CTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR GCA 90 bp CACCAGCTATGGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCAAAGATCCGCAGCTaGTTGTCCTTGCACGCCGTG +
Preference number: 4 (lower is better)
Translates to: HQLWGSVAGTQPAVSGNRSKIRS*LSLHAV
Trigger: CACGGCGTGCAAGGACAAGCAGCTGCGGATCTTTGA...CCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CTGCTGCCCATCAGGACTCCAGGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGCCAGCCGGCTATCCCTaGTGTTCTCATGGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: LLPIRTPGQAEDLVLVALPAGYP*CSHGPA
Trigger: CGCAGGCCCATGAGAACAGCAGGGATAGCCGGCTGG...CAGGGCCACCAAGACCAGATCTTCAGCCTGGCCTGGAGTCCTGATGGGCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp TTGGCTGCCAGTGGGTGGAAGCGCAGGGAGCAGATCTTCTCCGTGTGGCCTGTGCCAGCCGGCTATCCCTaGTGTTCTCATGGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: LAASGWKRREQIFSVWPVPAGYP*CSHGPA
Trigger: CGCAGGCCCATGAGAACAGCAGGGATAGCCGGCTGG...CACAGGCCACACGGAGAAGATCTGCTCCCTGCGCTTCCACCCACTGGCAGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGCAGCTTCAGCCGATCAGCTCCCCAGGTGCCCATCCATaGCAGCCGGCTATCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GQAEDLVLVALQLQPISSPGAHP*QPAIPA
Trigger: AGCAGGGATAGCCGGCTGGCATGGATGGGCACCTGG...GGAGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GTGGCCCTGCAGCTTCAGCCGATCAGCTCCAGCCTGAAGGTCCCAGATGCGAACCCAGGTGCCCATCCATaGCAGCCGGCTATCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VALQLQPISSSLKVPDANPGAHP*QPAIPA
Trigger: AGCAGGGATAGCCGGCTGGCATGGATGGGCACCTGG...GTTCGCATCTGGGACCTTCAGGCTGGAGCTGATCGGCTGAAGCTGCAGGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTCAAGGTGCTCCCAGGTaGCCATCCATGCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: AGAREVSSSLRMSREVCTQGAPR*PSMPAG
Trigger: GCCGGCTGGCATGGATGGGCACCTGGGAGCACCTTG...AGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp ACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCACCAGGTGTGGTGCAAGGTGCTCCCAGGTaGCCATCCATGCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: TATRSLLAQKPSLSPGVVQGAPR*PSMPAG
Trigger: GCCGGCTGGCATGGATGGGCACCTGGGAGCACCTTG...CACCACACCTGGTGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCACCTCTCGCCCTTTCCTaGCAGGACCAGGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LSSGTATRSLLAQKPSLSPLALS*QDQEPR
Trigger: TCTGGGCTCCTGGTCCTGGCAGGAAAGGGCGAGAGG...TGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp AGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCACCAGGTCCTCTCGCCCTTTCCTaGCAGGACCAGGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SGTATRSLLAQKPSLSPGPLALS*QDQEPR
Trigger: TCTGGGCTCCTGGTCCTGGCAGGAAAGGGCGAGAGG...ACCTGGTGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CACGAGACACCCAAGCGAGGTGTCCAAGGTGAGGGAGGCCAGGGCGCTGGAGAAGGAACTCCACAGCCTTaGGGGGCACATGGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: HETPKRGVQGEGGQGAGEGTPQP*GAHGSR
Trigger: TCGGCTACCATGTGCCCCGCAAGGCTGTGGAGTTCC...TTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTGTCTCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp TCCGTGTGGCCTGTGAGCACAGTCTCTGGCGTGGTGAGCACCTCTTCCAGGCCCGGAACTCCACAGCCTTaGGGGGCACATGGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: SVWPVSTVSGVVSTSSRPGTPQP*GAHGSR
Trigger: TCGGCTACCATGTGCCCCGCAAGGCTGTGGAGTTCC...GGGCCTGGAAGAGGTGCTCACCACGCCAGAGACTGTGCTCACAGGCCACACGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GCTGCTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTGACCTTCTGCACCTaGTGGTTGTCCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: AAEQRHGHTQLVGTEAVTLTFCT*WLSPAH
Trigger: GTGGGCTGGGGACAACCAGCAGGTGCAGAAGGTCAG...AGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CACCAGCTATGGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTTGAGGCTGACCTTCTaGACCTGCTGGTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: HQLWGSVAGTQPAVSGNRLRLTF*TCWLSP
Trigger: TGGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAA...CCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CGGATCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCTTGAGGCTGACCTTCTaGACCTGCTGGTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RILASSPATARRWGSKGSLRLTF*TCWLSP
Trigger: TGGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAA...GGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTGGGCCCAGCAGGCTCTaGAGCGACCTCAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: AGAREVSSSLRMSREVCTGPSRL*SDLKLG
Trigger: CCCCAGTTTGAGGTCGCTGCAGAGCCTGCTGGGCCC...AGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCGGGCCCAGCAGGCTCTaGAGCGACCTCAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSGPSRL*SDLKLG
Trigger: CCCCAGTTTGAGGTCGCTGCAGAGCCTGCTGGGCCC...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp AACAGTACAGCTGCCTCTCGCCCTTTCCTGCCAGGACCAGGAGCCCAGAGTCAGGGGCCCAGCAGGCTCTaGAGCGACCTCAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: NSTAASRPFLPGPGAQSQGPSRL*SDLKLG
Trigger: CCCCAGTTTGAGGTCGCTGCAGAGCCTGCTGGGCCC...CTGACTCTGGGCTCCTGGTCCTGGCAGGAAAGGGCGAGAGGCAGCTGTACTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp GGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGGGGCCCAGCAGGCTCTaGAGCGACCTCAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: GDQRSWMRPIQAGTSPGQGPSRL*SDLKLG
Trigger: CCCCAGTTTGAGGTCGCTGCAGAGCCTGCTGGGCCC...CTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp ACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCACCAGGTGTGGTGGGGCCCAGCAGGCTCTaGAGCGACCTCAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: TATRSLLAQKPSLSPGVVGPSRL*SDLKLG
Trigger: CCCCAGTTTGAGGTCGCTGCAGAGCCTGCTGGGCCC...CACCACACCTGGTGAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp AGCCGATGGGCACGATGGCTGTGTCGCTCAGCTGTAGGACGCGGAGTACCTCGCCTCGGTGCAGGACAGTaGCCTGAGCATGGCGGAACT +
Preference number: 4 (lower is better)
Translates to: SRWARWLCRSAVGRGVPRLGAGQ*PEHGGT
Trigger: AGTTCCGCCATGCTCAGGGCACTGTCCTGCACCGAG...GCGAGGTACTCCGCGTCCTACAGCTGAGCGACACAGCCATCGTGCCCATCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp TGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGAGCCTGTGCTCGGTGCAGGACAGTaGCCTGAGCATGGCGGAACT +
Preference number: 4 (lower is better)
Translates to: WPGPGSRQSFTVLSAEPVLGAGQ*PEHGGT
Trigger: AGTTCCGCCATGCTCAGGGCACTGTCCTGCACCGAG...CACAGGCTCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GCCCAGAGTCAGGGTCCAGCAGAGGCACGAGACACCCAAGCGAGGTGTCCAAGGCTCGGTGCAGGACAGTaGCCTGAGCATGGCGGAACT +
Preference number: 4 (lower is better)
Translates to: AQSQGPAEARDTQARCPRLGAGQ*PEHGGT
Trigger: AGTTCCGCCATGCTCAGGGCACTGTCCTGCACCGAG...CCTTGGACACCTCGCTTGGGTGTCTCGTGCCTCTGCTGGACCCTGACTCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp GAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTAGGAAGTGGCAGCTGCAGCGTGGGCAGTaGCGTGTCGGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: EVSSSLRMSREVCTRKWQLQRGQ*RVGQAA
Trigger: GGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAG...CTGCCACTTCCTAGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp CTGCTGCCCATCAGGACTCCAGGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGACAGCTGCCCCATTCTaGAGCGTGGGCAGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: LLPIRTPGQAEDLVLVALTAAPF*SVGSAV
Trigger: CACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGT...CAGGGCCACCAAGACCAGATCTTCAGCCTGGCCTGGAGTCCTGATGGGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CTGCCCATCAGGACTCCAGGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGCAGACAGCTGCCCCATTCTaGAGCGTGGGCAGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: LPIRTPGQAEDLVLVALQTAAPF*SVGSAV
Trigger: CACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGT...CTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGCCTGGAGTCCTGATGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp ACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCTGCAGATCAGTCACAGCTaGCCCATTCTGCAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: TPGPVDPHTPILADSGQLQISHS*PILQRG
Trigger: CCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTG...CAGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTCAGATCAGTCACAGCTaGCCCATTCTGCAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: LRATPGPVDPHTPILADSQISHS*PILQRG
Trigger: CCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTG...ACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp GGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCGTGGAACTCAGATCAGTCACAGCTaGCCCATTCTGCAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: GRWQAHSRQCPGTGPRGTQISHS*PILQRG
Trigger: CCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTG...AGTTCCACGAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCCTCTTCCAGGCCCTCTaGGGGTACCCGCCACAGTCG +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCLFQAL*GYPPQS
Trigger: CGACTGTGGCGGGTACCCGCAGAGGGCCTGGAAGAG...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp GCCGAGCCTGTGGCCAGGAGGAAGTCATCAAAGGGCGAGAAGTCCAAGTCGGTGCTCTTCCAGGCCCTCTaGGGGTACCCGCCACAGTCG +
Preference number: 4 (lower is better)
Translates to: AEPVARRKSSKGEKSKSVLFQAL*GYPPQS
Trigger: CGACTGTGGCGGGTACCCGCAGAGGGCCTGGAAGAG...CACCGACTTGGACTTCTCGCCCTTTGATGACTTCCTCCTGGCCACAGGCTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCTCTTCCAGGCCCTCTaGGGGTACCCGCCACAGTCG +
Preference number: 4 (lower is better)
Translates to: GDQRSWMRPIQAGTSPGQLFQAL*GYPPQS
Trigger: CGACTGTGGCGGGTACCCGCAGAGGGCCTGGAAGAG...CTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp AGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGCTCTTCCAGGCCCTCTaGGGGTACCCGCCACAGTCG +
Preference number: 4 (lower is better)
Translates to: RGDMCRGQRGIFQLEDEPLFQAL*GYPPQS
Trigger: CGACTGTGGCGGGTACCCGCAGAGGGCCTGGAAGAG...CGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR GCA 90 bp CTCCAGGCCAGGCTGAAGATCTGGTCTTGGTGGCCCTGCAGCTTCAGCCGATCACTCTTCCAGGCCCTCTaGGGGTACCCGCCACAGTCG +
Preference number: 4 (lower is better)
Translates to: LQARLKIWSWWPCSFSRSLFQAL*GYPPQS
Trigger: CGACTGTGGCGGGTACCCGCAGAGGGCCTGGAAGAG...TGATCGGCTGAAGCTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGCCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp ACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTGGCCAGCTGTGGTCTTGGTGGCCCTaGAGCTTCAGCCGATCAGCT +
Preference number: 4 (lower is better)
Translates to: TPGPVDPHTPILADSGQLWSWWP*SFSRSA
Trigger: AGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACCA...CAGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CCATCACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGGCCTCAGACAGTGGCCAGCTaGTGCCCATCAGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: PSHTQTMRAPRPPLGPGPQTVAS*CPSGLQ
Trigger: CTGGAGTCCTGATGGGCAGCAGCTGGCCACTGTCTG...AGGCCCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp CTCAGGGCCACTCCGGGGCCTGTAGACCCGCACACGCCCATCCTTGCAGACAGTCACATACCCAGACAATaGGAGCTCCGCGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LRATPGPVDPHTPILADSHIPRQ*ELRVLP
Trigger: AGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTG...ACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000632167.1
ENST00000633467.1
CDS-3UTR GCA 90 bp TGGAACAGCAGGCAAGATGGGGCAGCGTGGGGTGACCAAAGATCCTGGATGAGGGTCCAGGCCCAACACTaGCAAGGGTCCGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: WNSRQDGAAWGDQRSWMRVQAQH*QGSAGQ
Trigger: CTGGCCGGCGGACCCTTGGCAGTGTTGGGCCTGGAC...CCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTGCCTGCTGTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTCCAGGCCCAACACTaGCAAGGGTCCGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: VTCAGAREVSSSLRMSREVQAQH*QGSAGQ
Trigger: CTGGCCGGCGGACCCTTGGCAGTGTTGGGCCTGGAC...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR GCA 90 bp ACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGGTCCAGGCCCAACACTaGCAAGGGTCCGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: TCAGAREVSSSLRMSREVVQAQH*QGSAGQ
Trigger: CTGGCCGGCGGACCCTTGGCAGTGTTGGGCCTGGAC...CACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR GCA 90 bp TGGAACAGCAGGCAAGATGGGGCAGCGTGGGGTGACCAAAGATCCTGGATGAGGCACGGGTGTCGCCCTTaGCGGTCAGGAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: WNSRQDGAAWGDQRSWMRHGCRP*RSGAPG
Trigger: GCCTGGTGCTCCTGACCGGCAAGGGCGACACCCGTG...CCTCATCCAGGATCTTTGGTCACCCCACGCTGCCCCATCTTGCCTGCTGTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR GCA 90 bp GTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGCACGGGTGTCGCCCTTaGCGGTCAGGAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: VTCAGAREVSSSLRMSREHGCRP*RSGAPG
Trigger: GCCTGGTGCTCCTGACCGGCAAGGGCGACACCCGTG...CTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000576637.1
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000631757.1
ENST00000632167.1
CDS-3UTR GCA 90 bp GGACTGACGCAGCCGCAGGCACCGCATCAGCTCCACTTCCCGCACGTCGCACTCCCGGTTCCCCAGTTTTaGCACCATGGCATTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLTQPQAPHQLHFPHVALPVPQF*HHGIQQ
Trigger: CTGCTGAATGCCATGGTGGCAAAACTGGGGAACCGG...GAGTGCGACGTGCGGGAAGTGGAGCTGATGCGGTGCCTGCGGCTGCGTCAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GGCAGGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCATGAGCCGTGAGGTGTaGACTAGGAAGTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GRAWPGPGSRQSFTVLSAMSREV*TRKWQH
Trigger: GTGCTGCCACTTCCTAGTGCACACCTCACGGCTCAT...GGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GCTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCTGCAGGGGTGACATGTaGCGGGGCCAGAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: AEQRHGHTQLVGTEAVTLCRGDM*RGQRGI
Trigger: GATACCTCTCTGGCCCCGGCACATGTCACCCCTGCA...GAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GCCCAGAGTCAGGGTCCAGCAGAGGCACGAGACACCCAAGCGAGGTGTCCAAGGTGCAGGGGTGACATGTaGCGGGGCCAGAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: AQSQGPAEARDTQARCPRCRGDM*RGQRGI
Trigger: GATACCTCTCTGGCCCCGGCACATGTCACCCCTGCA...CCTTGGACACCTCGCTTGGGTGTCTCGTGCCTCTGCTGGACCCTGACTCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCAACATCCAAGGCAGGTaGGGGCCAGTCCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCNIQGR*GPVPAG
Trigger: CCCCGCAGGGACTGGCCCGCACCTGCCTTGGATGTT...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251166.9
ENST00000571227.5
ENST00000614702.4
ENST00000632167.1
CDS-3UTR GCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCAACATCCAAGGCAGGTaGGGGCCAGTCCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSNIQGR*GPVPAG
Trigger: CCCCGCAGGGACTGGCCCGCACCTGCCTTGGATGTT...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251166.9
ENST00000571227.5
ENST00000614702.4
ENST00000632167.1
CDS-3UTR GCA 90 bp CGACCATCACATACCCAGACAATGCGAGCTCCGCGTCCTCCCTTGGGCCCTGGGCAGGTCCCCATGGGCTaGCAGCTCAGAATGCCGTCA +
Preference number: 4 (lower is better)
Translates to: RPSHTQTMRAPRPPLGPGQVPMG*QLRMPS
Trigger: TGACGGCATTCTGAGCTGGCAGCCCATGGGGACCTG...CCCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR GCA 90 bp GCTGAGCAGCGGCACGGCCACACGCAGCTTGTTGGCACAGAAGCCGTCACTCTCGCTGCCAGCTCAGAATaGCGTCAGAGGTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: AEQRHGHTQLVGTEAVTLAASSE*RQRWGG
Trigger: TCCACCCCACCTCTGACGGCATTCTGAGCTGGCAGC...GAGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR GCA 90 bp CTGCGTCCCAGACCTTCACAGTGGTGCCTGCTGCGCTCACCAGAATGCCGTCAGTCACCTTGCACGCCGTaGCCACCAGGGCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: LRPRPSQWCLLRSPECRQSPCTP*PPGLHL
Trigger: GAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGTGA...CTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGGACGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR CCA 90 bp CACCAGCTATGGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGCGCTTGTCCTCTCCTTaGCCTTGCAGAGGCACAATG +
Preference number: 4 (lower is better)
Translates to: HQLWGSVAGTQPAVSGNRRLSSP*PCRGTM
Trigger: CATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCG...CCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp CTATGGGGGTCGGTGGCAGGCACACAGCCGGCAGTGTCCGGGAACAGGTCCTCGCGCTTGTCCTCTCCTTaGCCTTGCAGAGGCACAATG +
Preference number: 4 (lower is better)
Translates to: LWGSVAGTQPAVSGNRSSRLSSP*PCRGTM
Trigger: CATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCG...CGAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGACCCCCATAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCACTGAATGGCAGCCCAGGTaGGCCACGCGTCGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: AGAREVSSSLRMSREVCTEWQPR*ATRRLS
Trigger: GGACAAGCGACGCGTGGCCCACCTGGGCTGCCATTC...AGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR CCA 90 bp GGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGGAATGGCAGCCCAGGTaGGCCACGCGTCGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GDQRSWMRPIQAGTSPGQEWQPR*ATRRLS
Trigger: GGACAAGCGACGCGTGGCCCACCTGGGCTGCCATTC...CTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp GGAGGGGAAGAGAAACCCTCGCTTGCGTCTGCATCACCCACGGGTGTCTCCATCGAATGGCAGCCCAGGTaGGCCACGCGTCGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GGEEKPSLASASPTGVSIEWQPR*ATRRLS
Trigger: GGACAAGCGACGCGTGGCCCACCTGGGCTGCCATTC...GATGGAGACACCCGTGGGTGATGCAGACGCAAGCGAGGGTTTCTCTTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp AGAAACCCTCGCTTGCGTCTGCATCACCCACGGGTGTCTCCATCACCGCAGGCTGAATGGCAGCCCAGGTaGGCCACGCGTCGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RNPRLRLHHPRVSPSPQAEWQPR*ATRRLS
Trigger: GGACAAGCGACGCGTGGCCCACCTGGGCTGCCATTC...AGCCTGCGGTGATGGAGACACCCGTGGGTGATGCAGACGCAAGCGAGGGTTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp ACACCCAAGCGAGGTGTCCAAGGTGAGGGAGGCCAGGGCGCTGGAGAAGAACCGGTGACTAGGTCTGAATaGCAGCCCAGGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: TPKRGVQGEGGQGAGEEPVTRSE*QPRWAT
Trigger: CGTGGCCCACCTGGGCTGCCATTCAGACCTAGTCAC...CGGTTCTTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp GGCAGGGCCTGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCTGTCAGCCGAGCCTGTaGCCAGGAGGAAGTCATCAA +
Preference number: 4 (lower is better)
Translates to: GRAWPGPGSRQSFTVLSACQPSL*PGGSHQ
Trigger: TTGATGACTTCCTCCTGGCCACAGGCTCGGCTGACA...GGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000572153.5
ENST00000632167.1
ENST00000633889.1
CDS-3UTR CCA 90 bp TCACCTTGCACGCCGTGCCCACCAGGGCTCCATCTCGGCTCCAGACGGCGCTCTTGTCAGCCGAGCCTGTaGCCAGGAGGAAGTCATCAA +
Preference number: 4 (lower is better)
Translates to: SPCTPCPPGLHLGSRRRSCQPSL*PGGSHQ
Trigger: TTGATGACTTCCTCCTGGCCACAGGCTCGGCTGACA...AGAGCGCCGTCTGGAGCCGAGATGGAGCCCTGGTGGGCACGGCGTGCAAGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR CCA 90 bp GGTGACCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCTGCAGTACCTCCACTaGGAGGTCCTCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GDQRSWMRPIQAGTSPGQLQYLH*EVLGAQ
Trigger: CTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAG...CTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp GCAGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCTGCAGTACCTCCACTaGGAGGTCCTCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: AGVTCAGAREVSSSLRMSLQYLH*EVLGAQ
Trigger: CTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAG...GCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp TTCACAGTGGTGCCTGCTGCGCTCACCAGAATGCCGTCAGAGGTGGGGTGGAACCTGCAGTACCTCCACTaGGAGGTCCTCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: FTVVPAALTRMPSEVGWNLQYLH*EVLGAQ
Trigger: CTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAG...GTTCCACCCCACCTCTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR CCA 90 bp CACCCAAGCGAGGTGTCCAAGGTGAGGGAGGCCAGGGCGCTGGAGAAGAACCGCCCGTCAGAGGTGGGGTaGAACTGCAGTACCTCCACT +
Preference number: 4 (lower is better)
Translates to: HPSEVSKVREARALEKNRPSEVG*NCSTST
Trigger: AGTGGAGGTACTGCAGTTCCACCCCACCTCTGACGG...GCGGTTCTTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000571756.5
ENST00000632167.1
ENST00000633681.1
CDS-3UTR CCA 90 bp TGGGCAGTGCCGTGTCGGGCAGGCGGCCAGGCTTCCGTAGCTCAAGCACAGCCAGAATGCCGTCAGAGGTaGGGTGGAACTGCAGTACCT +
Preference number: 4 (lower is better)
Translates to: WAVPCRAGGQASVAQAQPECRQR*GGTAVP
Trigger: AGGTACTGCAGTTCCACCCCACCTCTGACGGCATTC...TGGCTGTGCTTGAGCTACGGAAGCCTGGCCGCCTGCCCGACACGGCACTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571227.5
ENST00000632167.1
CDS-3UTR CCA 90 bp TCCTGGCGTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGGAATGCCGTCAGAGGTaGGGTGGAACTGCAGTACCT +
Preference number: 4 (lower is better)
Translates to: SWRPHQPQRGDGGQRGPRECRQR*GGTAVP
Trigger: AGGTACTGCAGTTCCACCCCACCTCTGACGGCATTC...CCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571227.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
CDS-3UTR CCA 90 bp TGGCCAGGCCCTGGCAGTCGCCAGAGTTTTACCGTCCTGTCAGCCGAGCCTGTGCCCAGACCTTCACAGTaGTGCCTGCTGCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: WPGPGSRQSFTVLSAEPVPRPSQ*CLLRSP
Trigger: TGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGG...CACAGGCTCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572153.5
ENST00000633889.1
CDS-3UTR CCA 90 bp GTCCTCACCAGCCACAGCGAGGCGATGGGGGTCAAAGGGGTCCCAGGCCAGATCCCCGCGGCTTTGTTCTaGGGTCAAAGATCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: VLTSHSEAMGVKGVPGQIPAALF*GQRSAA
Trigger: AGCTGCGGATCTTTGACCCCAGAACAAAGCCGCGGG...GATCTGGCCTGGGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000571227.5
ENST00000574311.5
ENST00000576437.5
ENST00000632167.1
ENST00000632270.1
ENST00000633467.1
CDS-3UTR CCA 90 bp CCAAAGATCCTGGATGAGGCCAATCCAGGCTGGGACCAGCCCAGGTCAGCAGTGGACACACTGGGTCACTaGGCTCAGCGCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PKILDEANPGWDQPRSAVDTLGH*AQRRLL
Trigger: CAGCAGCCGGCGCTGAGCCCAGTGACCCAGTGTGTC...CACTGCTGACCTGGGCTGGTCCCAGCCTGGATTGGCCTCATCCAGGATCTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000614702.4
ENST00000617235.2
ENST00000632167.1
CDS-3UTR CCA 90 bp AGGGGTGACATGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGGACACACTGGGTCACTaGGCTCAGCGCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RGDMCRGQRGIFQLEDEPDTLGH*AQRRLL
Trigger: CAGCAGCCGGCGCTGAGCCCAGTGACCCAGTGTGTC...CGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACATGTCACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR CCA 90 bp TGTGCCGGGGCCAGAGAGGTATCTTCCAGCTTGAGGATGAGCCGTGAGGTGTGCGACACACTGGGTCACTaGGCTCAGCGCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CAGAREVSSSLRMSREVCDTLGH*AQRRLL
Trigger: CAGCAGCCGGCGCTGAGCCCAGTGACCCAGTGTGTC...GCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251166.9
ENST00000537233.6
ENST00000571227.5
ENST00000574025.5
ENST00000614702.4
ENST00000617235.2
ENST00000631534.1
ENST00000632167.1
CDS-3UTR CCA 90 bp TTCTCCGTGTGGCCTGTGAGCACAGTCTCTGGCGTGGTGAGCACCTCTTCCAGGGACACACTGGGTCACTaGGCTCAGCGCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FSVWPVSTVSGVVSTSSRDTLGH*AQRRLL
Trigger: CAGCAGCCGGCGCTGAGCCCAGTGACCCAGTGTGTC...CCTGGAAGAGGTGCTCACCACGCCAGAGACTGTGCTCACAGGCCACACGGAGAA<