RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CORO2B (Homo sapiens)

Ensembl gene IDs: ENSG00000103647

Ensembl transcript IDs: ENST00000261861.10, ENST00000540068.6, ENST00000543950.3

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGAAGAGACAGAAAGGAGCCGGGCCGCTCGCTGTCCTCGTCGGGTaGGGCAGGCTTCCGGGGCTGCTGAGGGAAGAGGGGGTGGGACGA +
Preference number: 1 (lower is better)
Translates to: GKRQKGAGPLAVLVG*GRLPGLLREEGVGR
Trigger: TCGTCCCACCCCCTCTTCCCTCAGCAGCCCCGGAAGCCTGCCTCACCCGACGAGGACAGCGAGCGGCCCGGCTCCTTTCTGTCTCTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CCA 90 bp GGATGGAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTaGGTAGCCCTGGCCTCTGTGGATGGGATTTTCCGTAGGGCGGCC +
Preference number: 1 (lower is better)
Translates to: GWRFIKERPSSPGGA*VALASVDGIFRRAA
Trigger: GGCCGCCCTACGGAAAATCCCATCCACAGAGGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR GCA 90 bp CCGGGGCTGCTGAGGGAAGAGGGGGTGGGACGAAAGAGGGATCACTaGAGCCTGCAGTCCAGCACTTACACTGTGGTACCTTCAGTGATG +
Preference number: 1 (lower is better)
Translates to: PGLLREEGVGRKRDH*SLQSSTYTVVPSVM
Trigger: CATCACTGAAGGTACCACAGTGTAAGTGCTGGACTGCAGGCTGCAGTGATCCCTCTTTCGTCCCACCCCCTCTTCCCTCAGCAGCCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CCA 90 bp GAAGCCCACAAAGGGATTGGCATCTTGATGCAGCGGGAAAGGCCCTaGCCTTGGGGTCTGAACACCCAGGGTCTTGGTCGTGGGCCCATT +
Preference number: 1 (lower is better)
Translates to: EAHKGIGILMQRERP*PWGLNTQGLGRGPI
Trigger: AATGGGCCCACGACCAAGACCCTGGGTGTTCAGACCCCAAGGCCAGGGCCTTTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CCA 90 bp GAGCGTGAGGGGCCTCAACTGGGCAGTGTGGCACATCGGCACTACTaGTGCTGGGTAGACGGTAGCAGTGGCTTCCAGTTCTCATTCTCC +
Preference number: 1 (lower is better)
Translates to: EREGPQLGSVAHRHY*CWVDGSSGFQFSFS
Trigger: GGAGAATGAGAACTGGAAGCCACTGCTACCGTCTACCCAGCACCAGTAGTGCCGATGTGCCACACTGCCCAGTTGAGGCCCCTCACGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CCA 90 bp CACTGTCTAGCTGTGGGGTACGGGGTGAGGAGGCCCTACTGTAGCTaGCTGGGAGGATGGAGGTTCATAAAGGAAAGGCCCAGCTCACCT +
Preference number: 1 (lower is better)
Translates to: HCLAVGYGVRRPYCS*LGGWRFIKERPSSP
Trigger: AGGTGAGCTGGGCCTTTCCTTTATGAACCTCCATCCTCCCAGCCAGCTACAGTAGGGCCTCCTCACCCCGTACCCCACAGCTAGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR GCA 90 bp CGTGAGGGGCCTCAACTGGGCAGTGTGGCACATCGGCACTACTGGTaGTGGGTAGACGGTAGCAGTGGCTTCCAGTTCTCATTCTCCATA +
Preference number: 1 (lower is better)
Translates to: REGPQLGSVAHRHYW*WVDGSSGFQFSFSI
Trigger: TATGGAGAATGAGAACTGGAAGCCACTGCTACCGTCTACCCAGCACCAGTAGTGCCGATGTGCCACACTGCCCAGTTGAGGCCCCTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CCA 90 bp CAAATTGAATGGGAAAAGGGTGTGCAAGAGCTTTGTAGAGAATCATaGGGAAGGCAAGGGGTCATTATGGCCTTGGAGAGCAATCCTCTG +
Preference number: 1 (lower is better)
Translates to: QIEWEKGVQELCRES*GRQGVIMALESNPL
Trigger: CAGAGGATTGCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTCTTGCACACCCTTTTCCCATTCAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR TCA 90 bp CTCTCGGTTTCCTCATCTGCAGAAGGGAGTAGACGTGAGGCTCCATaGGATCCTATGTGTCAAAGGACTGCAGAAACTTTAAAGTGCTAT +
Preference number: 1 (lower is better)
Translates to: LSVSSSAEGSRREAP*DPMCQRTAETLKCY
Trigger: ATAGCACTTTAAAGTTTCTGCAGTCCTTTGACACATAGGATCTCATGGAGCCTCACGTCTACTCCCTTCTGCAGATGAGGAAACCGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp CTAGCTGTGGGGTACGGGGTGAGGAGGCCCTACTGTAGCTGGCTGGGAGGATGGTCCCCTCTTGCTTCCTaGTCCACTGAGATGGAGCCC +
Preference number: 2 (lower is better)
Translates to: LAVGYGVRRPYCSWLGGWSPLAS*STEMEP
Trigger: GGGCTCCATCTCAGTGGACCAGGAAGCAAGAGGGGA...CCATCCTCCCAGCCAGCTACAGTAGGGCCTCCTCACCCCGTACCCCACAGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp CTAGCTGTGGGGTACGGGGTGAGGAGGCCCTACTGTAGCTGGCTGGGAGGATGGGCACATCGGCACTACTaGTGCTGGGTAGACGGTAGC +
Preference number: 2 (lower is better)
Translates to: LAVGYGVRRPYCSWLGGWAHRHY*CWVDGS
Trigger: GCTACCGTCTACCCAGCACCAGTAGTGCCGATGTGC...CCATCCTCCCAGCCAGCTACAGTAGGGCCTCCTCACCCCGTACCCCACAGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR GCA 90 bp CTAGCTGTGGGGTACGGGGTGAGGAGGCCCTACTGTAGCTGGCTGGGAGGATGGCATCGGCACTACTGGTaGTGGGTAGACGGTAGCAGT +
Preference number: 2 (lower is better)
Translates to: LAVGYGVRRPYCSWLGGWHRHYW*WVDGSS
Trigger: ACTGCTACCGTCTACCCAGCACCAGTAGTGCCGATG...CCATCCTCCCAGCCAGCTACAGTAGGGCCTCCTCACCCCGTACCCCACAGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp GGATGGAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCCTGGTCCACTGAGATaGAGCCCCTGCCAACCCCAG +
Preference number: 2 (lower is better)
Translates to: GWRFIKERPSSPGGAWVAPGPLR*SPCQPQ
Trigger: CTGGGGTTGGCAGGGGCTCCATCTCAGTGGACCAGG...GGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp GAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCGGCACTACTGGTGCTaGGTAGACGGTAGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: EVHKGKAQLTWRGLGSPGRHYWC*VDGSSG
Trigger: GCCACTGCTACCGTCTACCCAGCACCAGTAGTGCCG...GCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp GCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGTGCTCAACTGGGCAGTGTaGCACATCGGCACTACTGGT +
Preference number: 2 (lower is better)
Translates to: ASRRTRPHLRWSPLGRVVLNWAV*HIGTTG
Trigger: ACCAGTAGTGCCGATGTGCCACACTGCCCAGTTGAG...CACCACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp GGATGGAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCGAAGCCATCAGACCCTaGTCTGCCTTCCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GWRFIKERPSSPGGAWVAEAIRP*SAFPRA
Trigger: GGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTC...GGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR GCA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGGGGATCACTGCAGCCTaGAGTCCAGCACTTACACTG +
Preference number: 2 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKGITAA*SPALTL
Trigger: CAGTGTAAGTGCTGGACTGCAGGCTGCAGTGATCCC...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCTCCCCTCTTGCTTCCTaGTCCACTGAGATGGAGCCC +
Preference number: 2 (lower is better)
Translates to: RFIKERPSSPGGAWVALASPLAS*STEMEP
Trigger: GGGCTCCATCTCAGTGGACCAGGAAGCAAGAGGGGA...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp GAAGAGACAGAAAGGAGCCGGGCCGCTCGCTGTCCTCGTCGGGTGAGGCAGGCTAGTTCTAAGTCTAGCTaGGATCCCGCTTCCCCTCTT +
Preference number: 2 (lower is better)
Translates to: EETERSRAARCPRRVRQASSKSS*DPASPL
Trigger: AAGAGGGGAAGCGGGATCCCAGCTAGACTTAGAACT...AGCCTGCCTCACCCGACGAGGACAGCGAGCGGCCCGGCTCCTTTCTGTCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp GTGGCTGAGATAGCGGTGCTGAGACACACGCAGAGCATCCCTAGAAGCCATCAGGTGAGGGGCCTCAACTaGGCAGTGTGGCACATCGGC +
Preference number: 2 (lower is better)
Translates to: VAEIAVLRHTQSIPRSHQVRGLN*AVWHIG
Trigger: GCCGATGTGCCACACTGCCCAGTTGAGGCCCCTCAC...CTGATGGCTTCTAGGGATGCTCTGCGTGTGTCTCAGCACCGCTATCTCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR TCA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCGCTGTCCTCGTCGGGTaGGGCAGGCTTCCGGGGCTG +
Preference number: 2 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSAVLVG*GRLPGL
Trigger: CAGCCCCGGAAGCCTGCCTCACCCGACGAGGACAGC...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR GCA 90 bp GAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCGAAAGAGGGATCACTaGAGCCTGCAGTCCAGCACT +
Preference number: 2 (lower is better)
Translates to: EVHKGKAQLTWRGLGSPGRKRDH*SLQSST
Trigger: AGTGCTGGACTGCAGGCTGCAGTGATCCCTCTTTCG...GCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp TACACTGTGGTACCTTCAGTGATGCTGAGAGCTCCAGGCGGGAGTGCTGAGATGCCCCCACTCCTGTCCTaGCTCTGTCTCTGGGGTCAC +
Preference number: 2 (lower is better)
Translates to: YTVVPSVMLRAPGGSAEMPPLLS*LCLWGH
Trigger: GTGACCCCAGAGACAGAGCCAGGACAGGAGTGGGGG...CATCTCAGCACTCCCGCCTGGAGCTCTCAGCATCACTGAAGGTACCACAGTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp GGGCCACTTCTCTCGGTTTCCTCATCTGCAGAAGGGAGTAGACGTGAGGCTCCAAGTGCTGAGATGTCCTaGCAGCCCCCTTCACAGGGG +
Preference number: 2 (lower is better)
Translates to: GPLLSVSSSAEGSRREAPSAEMS*QPPSQG
Trigger: CCCCTGTGAAGGGGGCTGCCAGGACATCTCAGCACT...TGGAGCCTCACGTCTACTCCCTTCTGCAGATGAGGAAACCGAGAGAAGTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CAA 90 bp CATAGAGACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTaGATGCAGCGGGAAAGGCCCTGGCCTTGGGGTCTGAACACCCAG +
Preference number: 2 (lower is better)
Translates to: HRDLGTGEAHKGIGI*MQRERPWPWGLNTQ
Trigger: CTGGGTGTTCAGACCCCAAGGCCAGGGCCTTTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTCTCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCCAGGAGGTTAGAGGTTaGCTTCCAGTTCTCGAGGTG +
Preference number: 2 (lower is better)
Translates to: RFIKERPSSPGGAWVALAQEVRG*LPVLEV
Trigger: CACCTCGAGAACTGGAAGCCAACCTCTAACCTCCTG...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp GTGGCTGAGATAGCGGTGCTGAGACACACGCAGAGCATCCCTAGAAGCCATCAGGCACATCGGCACTACTaGTGCTGGGTAGACGGTAGC +
Preference number: 2 (lower is better)
Translates to: VAEIAVLRHTQSIPRSHQAHRHY*CWVDGS
Trigger: GCTACCGTCTACCCAGCACCAGTAGTGCCGATGTGC...CTGATGGCTTCTAGGGATGCTCTGCGTGTGTCTCAGCACCGCTATCTCAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR TCA 90 bp GGACACCCATTTCTTGATTTCCAGATCTCACCCCAAACTGTGACTCTTCTGAGATCCAGGCGGGAGTGCTaGGATGTCCTGGCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: GHPFLDFQISPQTVTLLRSRREC*DVLAAP
Trigger: GGGGGCTGCCAGGACATCTCAGCACTCCCGCCTGGA...TCTCAGAAGAGTCACAGTTTGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR GCA 90 bp GACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGCAGCGGGAAGGGATCACTGCAGCCTaGAGTCCAGCACTTACACTG +
Preference number: 2 (lower is better)
Translates to: DLGTGEAHKGIGILMQREGITAA*SPALTL
Trigger: CAGTGTAAGTGCTGGACTGCAGGCTGCAGTGATCCC...TTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR GCA 90 bp GACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGCAGCGGGAACGAAAGAGGGATCACTaGAGCCTGCAGTCCAGCACT +
Preference number: 2 (lower is better)
Translates to: DLGTGEAHKGIGILMQRERKRDH*SLQSST
Trigger: AGTGCTGGACTGCAGGCTGCAGTGATCCCTCTTTCG...TTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR GCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCAAAGTGCTATACGGATaGGAGTGGCTGTGGTCATTC +
Preference number: 2 (lower is better)
Translates to: RFIKERPSSPGGAWVALAKVLYG*EWLWSF
Trigger: GAATGACCACAGCCACTCGCATCCGTATAGCACTTT...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp TTCCGTAGGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGACCCCCACTCCTGTCCTaGCTCTGTCTCTGGGGTCAC +
Preference number: 2 (lower is better)
Translates to: FRRAAMGKAGMEYNASSRPPLLS*LCLWGH
Trigger: GTGACCCCAGAGACAGAGCCAGGACAGGAGTGGGGG...TCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCCTACGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp GGGCCACTTCTCTCGGTTTCCTCATCTGCAGAAGGGAGTAGACGTGAGGCTCCATTCTCCATAGAGACTTaGGCACTGGTGAAGCCCACA +
Preference number: 2 (lower is better)
Translates to: GPLLSVSSSAEGSRREAPFSIET*ALVKPT
Trigger: TGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAA...TGGAGCCTCACGTCTACTCCCTTCTGCAGATGAGGAAACCGAGAGAAGTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR TCA 90 bp GGGCCACTTCTCTCGGTTTCCTCATCTGCAGAAGGGAGTAGACGTGAGGCTCCAGGAGAAGTTAAGGGATaGGTAGAAACGACGGAGAGA +
Preference number: 2 (lower is better)
Translates to: GPLLSVSSSAEGSRREAPGEVKG*VETTER
Trigger: TCTCTCCGTCGTTTCTACTCATCCCTTAACTTCTCC...TGGAGCCTCACGTCTACTCCCTTCTGCAGATGAGGAAACCGAGAGAAGTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp GGACACCCATTTCTTGATTTCCAGATCTCACCCCAAACTGTGACTCTTCTGAGAAGTGCTGAGATGTCCTaGCAGCCCCCTTCACAGGGG +
Preference number: 2 (lower is better)
Translates to: GHPFLDFQISPQTVTLLRSAEMS*QPPSQG
Trigger: CCCCTGTGAAGGGGGCTGCCAGGACATCTCAGCACT...TCTCAGAAGAGTCACAGTTTGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CAA 90 bp GAGCTTTGTAGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTaGGAGAGCAATCCTCTGAATTCCCTGAAGACAAGAGGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: ELCRESWGRQGVIMA*ESNPLNSLKTRGWE
Trigger: TTCCCACCCTCTTGTCTTCAGGGAATTCAGAGGATTGCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR TCA 90 bp GGACACCCATTTCTTGATTTCCAGATCTCACCCCAAACTGTGACTCTTCTGAGAAGACTTGGGCACTGGTaGAGCCCACAAAGGGATTGG +
Preference number: 2 (lower is better)
Translates to: GHPFLDFQISPQTVTLLRRLGHW*SPQRDW
Trigger: CCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTCT...TCTCAGAAGAGTCACAGTTTGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR GCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCTATGTGTCAAAGGACTaGAGAAACTTTAAAGTGCTA +
Preference number: 2 (lower is better)
Translates to: RFIKERPSSPGGAWVALAYVSKD*RNFKVL
Trigger: TAGCACTTTAAAGTTTCTGCAGTCCTTTGACACATA...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR GCA 90 bp GGACACCCATTTCTTGATTTCCAGATCTCACCCCAAACTGTGACTCTTCTGAGAGTGGCATCTCAGAGTTaGGTGACCTTGGGCCACTTC +
Preference number: 2 (lower is better)
Translates to: GHPFLDFQISPQTVTLLRVASQS*VTLGHF
Trigger: GAAGTGGCCCAAGGTCACGCAACTCTGAGATGCCAC...TCTCAGAAGAGTCACAGTTTGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp TTCCGTAGGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGACAGGAGGTTAGAGGTTaGCTTCCAGTTCTCGAGGTG +
Preference number: 2 (lower is better)
Translates to: FRRAAMGKAGMEYNASSRQEVRG*LPVLEV
Trigger: CACCTCGAGAACTGGAAGCCAACCTCTAACCTCCTG...TCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCCTACGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp TTCCGTAGGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGAGGCAAGGGGTCATTATaGCCTTGGAGAGCAATCCTC +
Preference number: 2 (lower is better)
Translates to: FRRAAMGKAGMEYNASSRGKGSL*PWRAIL
Trigger: GAGGATTGCTCTCCAAGGCCATAATGACCCCTTGCC...TCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCCTACGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR TCA 90 bp GAGCTTTGTAGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTTGGAGAGCGGACTTTTATTAGCATaGGGTCAGGAGGTTAGAGGT +
Preference number: 2 (lower is better)
Translates to: ELCRESWGRQGVIMALESGLLLA*GQEVRG
Trigger: ACCTCTAACCTCCTGACCTCATGCTAATAAAAGTCC...GCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR TCA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCTGGACACCCATTTCTTaGTTTCCAGATCTCACCCCA +
Preference number: 2 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSWTPIS*FPDLTP
Trigger: TGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCCA...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp ATCTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCAGGCCTCATCTCAGATaGAGTCCCCTGGGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: ISPQTVTLLRTVFINSLCRPHLR*SPLGRV
Trigger: CACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCT...GCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR GCA 90 bp AGTGGCTTCCAGTTCTCATTCTCCATAGAGACTTGGGCACTGGTGAAGCCCACAAATGGGAAAAGGGTGTaGAAGAGCTTTGTAGAGAAT +
Preference number: 2 (lower is better)
Translates to: SGFQFSFSIETWALVKPTNGKRV*KSFVEN
Trigger: ATTCTCTACAAAGCTCTTGCACACCCTTTTCCCATT...TGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAATGAGAACTGGAAGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR GCA 90 bp ATCTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCCATCGGCACTACTGGTaGTGGGTAGACGGTAGCAGT +
Preference number: 2 (lower is better)
Translates to: ISPQTVTLLRTVFINSLCHRHYW*WVDGSS
Trigger: ACTGCTACCGTCTACCCAGCACCAGTAGTGCCGATG...GCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CCA 90 bp ATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCCCCATTGCAACCCTCAGTAGTTCTAAGTCTAGCTaGGATCCCGCTTCCCCTCTT +
Preference number: 2 (lower is better)
Translates to: IVDLLGDFISHFPIATLSSSKSS*DPASPL
Trigger: AAGAGGGGAAGCGGGATCCCAGCTAGACTTAGAACT...ACTGAGGGTTGCAATGGGGAAATGACTTATAAAGTCACCCAGCAGGTCAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR TCA 90 bp CTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGTGGACTTTTATTAGCATaGGGTCAGGAGGTTAGAGGT +
Preference number: 2 (lower is better)
Translates to: LTPNCDSSENSVYKLFVRGLLLA*GQEVRG
Trigger: ACCTCTAACCTCCTGACCTCATGCTAATAAAAGTCC...ACGCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR GCA 90 bp ATCTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCAAAGTGCTATACGGATaGGAGTGGCTGTGGTCATTC +
Preference number: 2 (lower is better)
Translates to: ISPQTVTLLRTVFINSLCKVLYG*EWLWSF
Trigger: GAATGACCACAGCCACTCGCATCCGTATAGCACTTT...GCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR GCA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCTTTATAAACTCTTTGTaGGTAGTGGGAAATGAAAGG +
Preference number: 2 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSFINSL*VVGNER
Trigger: CCTTTCATTTCCCACTACGCACAAAGAGTTTATAAA...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR TCA 72 bp CAGAAAGGAGCCGGGCCGCTCGCTGTCCTCGTCGGGTaGGGCAGGCTTCCGGGGCTGCTGAGGGAAGAGGGG +
Preference number: 3 (lower is better)
Translates to: QKGAGPLAVLVG*GRLPGLLREEG
Trigger: CCCCTCTTCCCTCAGCAGCCCCGGAAGCCTGCCTCACCCGACGAGGACAGCGAGCGGCCCGGCTCCTTTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CAA 90 bp GCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGTGGGAAAGGCCCTGGCCTaGGGGTCTGAACACCCAGGG +
Preference number: 3 (lower is better)
Translates to: ASRRTRPHLRWSPLGRVVGKALA*GSEHPG
Trigger: CCCTGGGTGTTCAGACCCCAAGGCCAGGGCCTTTCC...CACCACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CAA 90 bp GCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGTGATCCCGCTTCCCCTCTaGCTTCCTGGTCCACTGAGA +
Preference number: 3 (lower is better)
Translates to: ASRRTRPHLRWSPLGRVVIPLPL*LPGPLR
Trigger: TCTCAGTGGACCAGGAAGCAAGAGGGGAAGCGGGAT...CACCACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CCA 72 bp ATTGGCATCTTGATGCAGCGGGAAAGGCCCTGGCCTTaGGGTCTGAACACCCAGGGTCTTGGTCGTGGGCCC +
Preference number: 3 (lower is better)
Translates to: IGILMQRERPWP*GLNTQGLGRGP
Trigger: GGGCCCACGACCAAGACCCTGGGTGTTCAGACCCCAAGGCCAGGGCCTTTCCCGCTGCATCAAGATGCCAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CCA 72 bp AAGGATCTAGGGGCACAGAGCGTGAGGGGCCTCAACTaGGCAGTGTGGCACATCGGCACTACTGGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: KDLGAQSVRGLN*AVWHIGTTGAG
Trigger: CCCAGCACCAGTAGTGCCGATGTGCCACACTGCCCAGTTGAGGCCCCTCACGCTCTGTGCCCCTAGATCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CCA 72 bp GGGCCTCAACTGGGCAGTGTGGCACATCGGCACTACTaGTGCTGGGTAGACGGTAGCAGTGGCTTCCAGTTC +
Preference number: 3 (lower is better)
Translates to: GPQLGSVAHRHY*CWVDGSSGFQF
Trigger: GAACTGGAAGCCACTGCTACCGTCTACCCAGCACCAGTAGTGCCGATGTGCCACACTGCCCAGTTGAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CCA 72 bp GACACACGCAGAGCATCCCTAGAAGCCATCAGACCCTaGTCTGCCTTCCCCAGGGCCAAGCTCCACCCTTCT +
Preference number: 3 (lower is better)
Translates to: DTRRASLEAIRP*SAFPRAKLHPS
Trigger: AGAAGGGTGGAGCTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCGTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CCA 72 bp GCTGTGGGGTACGGGGTGAGGAGGCCCTACTGTAGCTaGCTGGGAGGATGGAGGTTCATAAAGGAAAGGCCC +
Preference number: 3 (lower is better)
Translates to: AVGYGVRRPYCS*LGGWRFIKERP
Trigger: GGGCCTTTCCTTTATGAACCTCCATCCTCCCAGCCAGCTACAGTAGGGCCTCCTCACCCCGTACCCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CAA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCGTCGTGGGCCCATTGTaGACCTGCTGGGTGACTTTA +
Preference number: 3 (lower is better)
Translates to: RFIKERPSSPGGAWVALAVVGPL*TCWVTL
Trigger: TAAAGTCACCCAGCAGGTCAACAATGGGCCCACGAC...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CAA 90 bp CTAGCTGTGGGGTACGGGGTGAGGAGGCCCTACTGTAGCTGGCTGGGAGGATGGGTGGACACCCATTTCTaGATTTCCAGATCTCACCCC +
Preference number: 3 (lower is better)
Translates to: LAVGYGVRRPYCSWLGGWVDTHF*ISRSHP
Trigger: GGGGTGAGATCTGGAAATCAAGAAATGGGTGTCCAC...CCATCCTCCCAGCCAGCTACAGTAGGGCCTCCTCACCCCGTACCCCACAGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CAA 90 bp CTCCATAGAGACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGGGAAAGGCCCTGGCCTaGGGGTCTGAACACCCAGGG +
Preference number: 3 (lower is better)
Translates to: LHRDLGTGEAHKGIGILMGKALA*GSEHPG
Trigger: CCCTGGGTGTTCAGACCCCAAGGCCAGGGCCTTTCC...CATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR GCA 72 bp CCTCAACTGGGCAGTGTGGCACATCGGCACTACTGGTaGTGGGTAGACGGTAGCAGTGGCTTCCAGTTCTCA +
Preference number: 3 (lower is better)
Translates to: PQLGSVAHRHYW*WVDGSSGFQFS
Trigger: TGAGAACTGGAAGCCACTGCTACCGTCTACCCAGCACCAGTAGTGCCGATGTGCCACACTGCCCAGTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CCA 72 bp AAAGGGATTGGCATCTTGATGCAGCGGGAAAGGCCCTaGCCTTGGGGTCTGAACACCCAGGGTCTTGGTCGT +
Preference number: 3 (lower is better)
Translates to: KGIGILMQRERP*PWGLNTQGLGR
Trigger: ACGACCAAGACCCTGGGTGTTCAGACCCCAAGGCCAGGGCCTTTCCCGCTGCATCAAGATGCCAATCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CAA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCGGGGTCATTATGGCCTaGGAGAGCAATCCTCTGAAT +
Preference number: 3 (lower is better)
Translates to: RFIKERPSSPGGAWVALAGVIMA*ESNPLN
Trigger: ATTCAGAGGATTGCTCTCCAAGGCCATAATGACCCC...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CAA 90 bp GGGCCACTTCTCTCGGTTTCCTCATCTGCAGAAGGGAGTAGACGTGAGGCTCCAGTCGTGGGCCCATTGTaGACCTGCTGGGTGACTTTA +
Preference number: 3 (lower is better)
Translates to: GPLLSVSSSAEGSRREAPVVGPL*TCWVTL
Trigger: TAAAGTCACCCAGCAGGTCAACAATGGGCCCACGAC...TGGAGCCTCACGTCTACTCCCTTCTGCAGATGAGGAAACCGAGAGAAGTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CAA 90 bp GACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGCAGCGGGAATTGGTCGTGGGCCCATaGTTGACCTGCTGGGTGACT +
Preference number: 3 (lower is better)
Translates to: DLGTGEAHKGIGILMQRELVVGP*LTCWVT
Trigger: AGTCACCCAGCAGGTCAACAATGGGCCCACGACCAA...TTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CAA 90 bp GGGCCACTTCTCTCGGTTTCCTCATCTGCAGAAGGGAGTAGACGTGAGGCTCCAGGGGTCATTATGGCCTaGGAGAGCAATCCTCTGAAT +
Preference number: 3 (lower is better)
Translates to: GPLLSVSSSAEGSRREAPGVIMA*ESNPLN
Trigger: ATTCAGAGGATTGCTCTCCAAGGCCATAATGACCCC...TGGAGCCTCACGTCTACTCCCTTCTGCAGATGAGGAAACCGAGAGAAGTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR TCA 72 bp CTGTGGTCATTCTACGTGCATAAGGCTGAAAGTGGCTaGGATAGCGGTGCTGAGACACACGCAGAGCATCCC +
Preference number: 3 (lower is better)
Translates to: LWSFYVHKAESG*DSGAETHAEHP
Trigger: GGGATGCTCTGCGTGTGTCTCAGCACCGCTATCTCAGCCACTTTCAGCCTTATGCACGTAGAATGACCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR GCA 72 bp TGCTATACGGATGCGAGTGGCTGTGGTCATTCTACGTaGATAAGGCTGAAAGTGGCTGAGATAGCGGTGCTG +
Preference number: 3 (lower is better)
Translates to: CYTDASGCGHST*IRLKVAEIAVL
Trigger: CAGCACCGCTATCTCAGCCACTTTCAGCCTTATGCACGTAGAATGACCACAGCCACTCGCATCCGTATAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CAA 90 bp GGACACCCATTTCTTGATTTCCAGATCTCACCCCAAACTGTGACTCTTCTGAGAATCCCGCTTCCCCTCTaGCTTCCTGGTCCACTGAGA +
Preference number: 3 (lower is better)
Translates to: GHPFLDFQISPQTVTLLRIPLPL*LPGPLR
Trigger: TCTCAGTGGACCAGGAAGCAAGAGGGGAAGCGGGAT...TCTCAGAAGAGTCACAGTTTGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CAA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCATTCTCCATAGAGACTaGGGCACTGGTGAAGCCCAC +
Preference number: 3 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSILHRD*GTGEAH
Trigger: GTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAAT...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CAA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCGTGTTTATAAACTCTTaGTGCGTAGTGGGAAATGAA +
Preference number: 3 (lower is better)
Translates to: RFIKERPSSPGGAWVALAVFINS*CVVGNE
Trigger: TTCATTTCCCACTACGCACAAAGAGTTTATAAACAC...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CCA 72 bp AGCAGTGGCTTCCAGTTCTCATTCTCCATAGAGACTTaGGCACTGGTGAAGCCCACAAAGGGATTGGCATCT +
Preference number: 3 (lower is better)
Translates to: SSGFQFSFSIET*ALVKPTKGLAS
Trigger: AGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAATGAGAACTGGAAGCCACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR GCA 72 bp CCCTGCCTGGCTCACAAATTGAATGGGAAAAGGGTGTaGAAGAGCTTTGTAGAGAATCATGGGGAAGGCAAG +
Preference number: 3 (lower is better)
Translates to: PCLAHKLNGKRV*KSFVENHGEGK
Trigger: CTTGCCTTCCCCATGATTCTCTACAAAGCTCTTGCACACCCTTTTCCCATTCAATTTGTGAGCCAGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CCA 72 bp TGGCCTCTGTGGATGGGATTTTCCGTAGGGCGGCCATaGGAAAAGCAGGTATGGAGTATAATGCATCTAGTA +
Preference number: 3 (lower is better)
Translates to: WPLWMGFSVGRP*EKQVWSIMHLV
Trigger: TACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCCTACGGAAAATCCCATCCACAGAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR TCA 72 bp ACAAGATCAAATGAAATGTGGCATCTCAGAGTTGCGTaGCCTTGGGCCACTTCTCTCGGTTTCCTCATCTGC +
Preference number: 3 (lower is better)
Translates to: TRSNEMWHLRVA*PWATSLGFLIC
Trigger: GCAGATGAGGAAACCGAGAGAAGTGGCCCAAGGTCACGCAACTCTGAGATGCCACATTTCATTTGATCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CAA 90 bp GGACACCCATTTCTTGATTTCCAGATCTCACCCCAAACTGTGACTCTTCTGAGATGCCTGGCTCACAAATaGAATGGGAAAAGGGTGTGC +
Preference number: 3 (lower is better)
Translates to: GHPFLDFQISPQTVTLLRCLAHK*NGKRVC
Trigger: GCACACCCTTTTCCCATTCAATTTGTGAGCCAGGCA...TCTCAGAAGAGTCACAGTTTGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR-3UTR CAA 90 bp CTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGTAAAGGGATTGGCATCTaGATGCAGCGGGAAAGGCCC +
Preference number: 3 (lower is better)
Translates to: LTPNCDSSENSVYKLFVRKGIGI*MQRERP
Trigger: GGGCCTTTCCCGCTGCATCAAGATGCCAATCCCTTT...ACGCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR GCA 72 bp TCAAAGGACTGCAGAAACTTTAAAGTGCTATACGGATaGGAGTGGCTGTGGTCATTCTACGTGCATAAGGCT +
Preference number: 3 (lower is better)
Translates to: SKDCRNFKVLYG*EWLWSFYVHKA
Trigger: AGCCTTATGCACGTAGAATGACCACAGCCACTCGCATCCGTATAGCACTTTAAAGTTTCTGCAGTCCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR GCA 72 bp GATCCTATGTGTCAAAGGACTGCAGAAACTTTAAAGTaGTATACGGATGCGAGTGGCTGTGGTCATTCTACG +
Preference number: 3 (lower is better)
Translates to: DPMCQRTAETLK*YTDASGCGHST
Trigger: CGTAGAATGACCACAGCCACTCGCATCCGTATAGCACTTTAAAGTTTCTGCAGTCCTTTGACACATAGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CCA 72 bp ACACTAATCCCTACCCTGCCTGGCTCACAAATTGAATaGGAAAAGGGTGTGCAAGAGCTTTGTAGAGAATCA +
Preference number: 3 (lower is better)
Translates to: TLIPTLPGSQIE*EKGVQELCRES
Trigger: TGATTCTCTACAAAGCTCTTGCACACCCTTTTCCCATTCAATTTGTGAGCCAGGCAGGGTAGGGATTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CCA 72 bp GACTGCAGAAACTTTAAAGTGCTATACGGATGCGAGTaGCTGTGGTCATTCTACGTGCATAAGGCTGAAAGT +
Preference number: 3 (lower is better)
Translates to: DCRNFKVLYGCE*LWSFYVHKAES
Trigger: ACTTTCAGCCTTATGCACGTAGAATGACCACAGCCACTCGCATCCGTATAGCACTTTAAAGTTTCTGCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GAAGAGACAGAAAGGAGCCGGGCCGCTCGCTGTCCTCGTCGGGTGAGGCAGGCTTCCAGGCGGGAGTGCTaGGATGTCCTGGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: EETERSRAARCPRRVRQASRREC*DVLAAP
Trigger: GGGGGCTGCCAGGACATCTCAGCACTCCCGCCTGGA...AGCCTGCCTCACCCGACGAGGACAGCGAGCGGCCCGGCTCCTTTCTGTCTCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp CTAGCTGTGGGGTACGGGGTGAGGAGGCCCTACTGTAGCTGGCTGGGAGGATGGCCCGCCGCTCGTCGCTaGTGTCAGCCCCGAATGTGC +
Preference number: 4 (lower is better)
Translates to: LAVGYGVRRPYCSWLGGWPAARR*CQPRMC
Trigger: GCACATTCGGGGCTGACATCAGCGACGAGCGGCGGG...CCATCCTCCCAGCCAGCTACAGTAGGGCCTCCTCACCCCGTACCCCACAGCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261861.10
CDS-3UTR TCA 90 bp GAAGAGACAGAAAGGAGCCGGGCCGCTCGCTGTCCTCGTCGGGTGAGGCAGGCTCTGTGGGGTACGGGGTaGGGAGGCCCTACTGTAGCT +
Preference number: 4 (lower is better)
Translates to: EETERSRAARCPRRVRQALWGTG*GGPTVA
Trigger: AGCTACAGTAGGGCCTCCTCACCCCGTACCCCACAG...AGCCTGCCTCACCCGACGAGGACAGCGAGCGGCCCGGCTCCTTTCTGTCTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCTCCAGGCGGGAGTGCTaGGATGTCCTGGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RFIKERPSSPGGAWVALASRREC*DVLAAP
Trigger: GGGGGCTGCCAGGACATCTCAGCACTCCCGCCTGGA...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCGAAGGAGCCGCCCCCTaGGCTCTCGGTGACGATGGC +
Preference number: 4 (lower is better)
Translates to: RFIKERPSSPGGAWVALAEGAAP*ALGDDG
Trigger: GCCATCGTCACCGAGAGCGCAGGGGGCGGCTCCTTC...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp TACACTGTGGTACCTTCAGTGATGCTGAGAGCTCCAGGCGGGAGTGCTGAGATGCGCCGGCTGTGCCCGTaGAGCTCCAGGAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: YTVVPSVMLRAPGGSAEMRRLCP*SSRSAS
Trigger: GGAGGCGCTCCTGGAGCTGCACGGGCACAGCCGGCG...CATCTCAGCACTCCCGCCTGGAGCTCTCAGCATCACTGAAGGTACCACAGTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GGGCCACTTCTCTCGGTTTCCTCATCTGCAGAAGGGAGTAGACGTGAGGCTCCACCCACACGCCGGCTGTaGCCGTGCAGCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GPLLSVSSSAEGSRREAPPTRRL*PCSSRS
Trigger: GCTCCTGGAGCTGCACGGGCACAGCCGGCGTGTGGG...TGGAGCCTCACGTCTACTCCCTTCTGCAGATGAGGAAACCGAGAGAAGTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGTGGACACATCCAGCCCGTaGTTGGGCATGACCCCTAGG +
Preference number: 4 (lower is better)
Translates to: ASRRTRPHLRWSPLGRVVDTSSP*LGMTPR
Trigger: CCTAGGGGTCATGCCCAAGCACGGGCTGGATGTGTC...CACCACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GAAGAGACAGAAAGGAGCCGGGCCGCTCGCTGTCCTCGTCGGGTGAGGCAGGCTGGTGGCCGCAGACCTTaGGGTAGTTGGGTTCAATCC +
Preference number: 4 (lower is better)
Translates to: EETERSRAARCPRRVRQAGGRRP*GSWVQS
Trigger: GGATTGAACCCAACTACCCCAAGGTCTGCGGCCACC...AGCCTGCCTCACCCGACGAGGACAGCGAGCGGCCCGGCTCCTTTCTGTCTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp CTCAGCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTCCTGGTCCACTGAGATaGAGCCCCTGCCAACCCCAG +
Preference number: 4 (lower is better)
Translates to: LSFQEDEASSQMESPGEGPGPLR*SPCQPQ
Trigger: CTGGGGTTGGCAGGGGCTCCATCTCAGTGGACCAGG...ACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGTGAGTGCTGAGATGTCCTaGCAGCCCCCTTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: ASRRTRPHLRWSPLGRVVSAEMS*QPPSQG
Trigger: CCCCTGTGAAGGGGGCTGCCAGGACATCTCAGCACT...CACCACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGTGGGAAGACTTGCACAATaGCCCACGGCACCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ASRRTRPHLRWSPLGRVVGRLAQ*PTAPSR
Trigger: CCTGCTGGGTGCCGTGGGCCATTGTGCAAGTCTTCC...CACCACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540068.6
CDS-3UTR CCA 90 bp GAAGAGACAGAAAGGAGCCGGGCCGCTCGCTGTCCTCGTCGGGTGAGGCAGGCTCATTCGACCGCGGCCTaGAAGACTTGCACAATGGCC +
Preference number: 4 (lower is better)
Translates to: EETERSRAARCPRRVRQAHSTAA*KTCTMA
Trigger: GGCCATTGTGCAAGTCTTCCAGGCCGCGGTCGAATG...AGCCTGCCTCACCCGACGAGGACAGCGAGCGGCCCGGCTCCTTTCTGTCTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540068.6
CDS-3UTR TCA 90 bp GACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGCAGCGGGAACCCCTGCGCTCTCGGTaGCGATGGCCAGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: DLGTGEAHKGIGILMQREPLRSR*RWPGSG
Trigger: CCCGCTTCCTGGCCATCGTCACCGAGAGCGCAGGGG...TTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp AGGGATTGGCATCTTGATGCAGCGGGAAAGGCCCTGGCCTTGGGGTCTGAACACCCTTGCACGTGGTGGTaGGCAGGCTGCCGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: RDWHLDAAGKALALGSEHPCTWW*AGCRPC
Trigger: ACACGGACGGCAGCCTGCTCACCACCACGTGCAAGG...GTGTTCAGACCCCAAGGCCAGGGCCTTTCCCGCTGCATCAAGATGCCAATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GGATGGAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCCTTGCACGTGGTGGTaGGCAGGCTGCCGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: GWRFIKERPSSPGGAWVAPCTWW*AGCRPC
Trigger: ACACGGACGGCAGCCTGCTCACCACCACGTGCAAGG...GGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGTGGCACGGGATCTCGGTTaGTGCCTCCCAGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: ASRRTRPHLRWSPLGRVVARDLG*CLPAIH
Trigger: ATGAATGGCTGGGAGGCATCAACCGAGATCCCGTGC...CACCACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGCAGCGGGAACCCACACGCCGGCTGTaGCCGTGCAGCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: DLGTGEAHKGIGILMQREPTRRL*PCSSRS
Trigger: GCTCCTGGAGCTGCACGGGCACAGCCGGCGTGTGGG...TTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGGCTGGAGCTGCCGAATaGGGATGTCCTTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKAGAAE*GCPSGP
Trigger: TGGCCCAGAAGGACATCCGCATTCGGCAGCTCCAGC...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GAAGAGACAGAAAGGAGCCGGGCCGCTCGCTGTCCTCGTCGGGTGAGGCAGGCTGGGATCACTGCAGCCTaGAGTCCAGCACTTACACTG +
Preference number: 4 (lower is better)
Translates to: EETERSRAARCPRRVRQAGITAA*SPALTL
Trigger: CAGTGTAAGTGCTGGACTGCAGGCTGCAGTGATCCC...AGCCTGCCTCACCCGACGAGGACAGCGAGCGGCCCGGCTCCTTTCTGTCTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCTCCAGCACATTGCCCTaGTGGCCGCAGACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RFIKERPSSPGGAWVALASSTLP*WPQTLG
Trigger: CCCCAAGGTCTGCGGCCACCAGGGCAATGTGCTGGA...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCGCCTTTCTGCGGGGCTaGGGAGCGGAACTCCATGAG +
Preference number: 4 (lower is better)
Translates to: RFIKERPSSPGGAWVALAAFLRG*GAELHE
Trigger: CTCATGGAGTTCCGCTCCCCAGCCCCGCAGAAAGGC...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCGTGAGGGGCCTCAACTaGGCAGTGTGGCACATCGGC +
Preference number: 4 (lower is better)
Translates to: RFIKERPSSPGGAWVALAVRGLN*AVWHIG
Trigger: GCCGATGTGCCACACTGCCCAGTTGAGGCCCCTCAC...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCGAAGCCATCAGACCCTaGTCTGCCTTCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RFIKERPSSPGGAWVALAEAIRP*SAFPRA
Trigger: GGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTC...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CAA 72 bp GATTGGCATCTTGATGCAGCGGGAAAGGCCCTGGCCTaGGGGTCTGAACACCCAGGGTCTTGGTCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: DWHLDAAGKALA*GSEHPGSWSWA
Trigger: GGCCCACGACCAAGACCCTGGGTGTTCAGACCCCAAGGCCAGGGCCTTTCCCGCTGCATCAAGATGCCAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp CTCAGCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGCTGCCGTCCGTGTTaGAGGACATGCAGAGGATCA +
Preference number: 4 (lower is better)
Translates to: LSFQEDEASSQMESPGEGGCRPC*RTCRGS
Trigger: TGATCCTCTGCATGTCCTTCAACACGGACGGCAGCC...ACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCTGGAGACCCCTGTCGTaGGGAGCCGCTTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: RFIKERPSSPGGAWVALAWRPLS*GAASCS
Trigger: GGAACATGAAGCGGCTCCTCACGACAGGGGTCTCCA...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGTGGCTCGATCAGGCCCTTaGGAGTCACCAGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: ASRRTRPHLRWSPLGRVVARSGP*ESPACR
Trigger: TCTACAAGCTGGTGACTCTCAAGGGCCTGATCGAGC...CACCACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGTCAATCCTGCCTGTCTaGTCCAGGGGGATGACGAGG +
Preference number: 4 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKSILPV*SRGMTR
Trigger: CCTCGTCATCCCCCTGGAGCAGACAGGCAGGATTGA...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGAGCAGTGCTCCCGGTTaGCCACCTTCCCGTAGACAT +
Preference number: 4 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKSSAPG*PPSRRH
Trigger: ATGTCTACGGGAAGGTGGCCAACCGGGAGCACTGCT...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GAAGAGACAGAAAGGAGCCGGGCCGCTCGCTGTCCTCGTCGGGTGAGGCAGGCTTGTGGTTTTTGCAGTTaGCCTCCTGCAGAACACGGC +
Preference number: 4 (lower is better)
Translates to: EETERSRAARCPRRVRQACGFCS*PPAEHG
Trigger: GCCGTGTTCTGCAGGAGGCCAACTGCAAAAACCACA...AGCCTGCCTCACCCGACGAGGACAGCGAGCGGCCCGGCTCCTTTCTGTCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGTCCCCTCTTGCTTCCTaGTCCACTGAGATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKSPLAS*STEMEP
Trigger: GGGCTCCATCTCAGTGGACCAGGAAGCAAGAGGGGA...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGTGTCCGTAGGGCGGCCATaGGAAAAGCAGGTATGGAGT +
Preference number: 4 (lower is better)
Translates to: ASRRTRPHLRWSPLGRVVSVGRP*EKQVWS
Trigger: ACTCCATACCTGCTTTTCCCATGGCCGCCCTACGGA...CACCACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp CTCAGCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTCGTGCACATTCTTGGTaGTGGGGATCCCATCGAAGC +
Preference number: 4 (lower is better)
Translates to: LSFQEDEASSQMESPGEGRAHSW*WGSHRS
Trigger: GCTTCGATGGGATCCCCATCACCAAGAATGTGCACG...ACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp AGGGATTGGCATCTTGATGCAGCGGGAAAGGCCCTGGCCTTGGGGTCTGAACACTGGAGACCCCTGTCGTaGGGAGCCGCTTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: RDWHLDAAGKALALGSEHWRPLS*GAASCS
Trigger: GGAACATGAAGCGGCTCCTCACGACAGGGGTCTCCA...GTGTTCAGACCCCAAGGCCAGGGCCTTTCCCGCTGCATCAAGATGCCAATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGGCTCGATCAGGCCCTTaGGAGTCACCAGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKARSGP*ESPACR
Trigger: TCTACAAGCTGGTGACTCTCAAGGGCCTGATCGAGC...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCGGAGGAGATGAGTGCTaGCACTGTCTAGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: EVHKGKAQLTWRGLGSPGGGDEC*HCLAVG
Trigger: CCCCACAGCTAGACAGTGTCAGCACTCATCTCCTCC...GCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp AGGGATTGGCATCTTGATGCAGCGGGAAAGGCCCTGGCCTTGGGGTCTGAACACGCTGGAGCTGCCGAATaGGGATGTCCTTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RDWHLDAAGKALALGSEHAGAAE*GCPSGP
Trigger: TGGCCCAGAAGGACATCCGCATTCGGCAGCTCCAGC...GTGTTCAGACCCCAAGGCCAGGGCCTTTCCCGCTGCATCAAGATGCCAATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGAGTTCCAGCTGGAGCTaGCGAATGCGGATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKSSSWS*RMRMSF
Trigger: GAAGGACATCCGCATTCGGCAGCTCCAGCTGGAACT...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGCGAAAGAGGGATCACTaGAGCCTGCAGTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKRKRDH*SLQSST
Trigger: AGTGCTGGACTGCAGGCTGCAGTGATCCCTCTTTCG...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GGGCCACTTCTCTCGGTTTCCTCATCTGCAGAAGGGAGTAGACGTGAGGCTCCAGCGGCCTGGAAGACTTaGACAATGGCCCACGGCACC +
Preference number: 4 (lower is better)
Translates to: GPLLSVSSSAEGSRREAPAAWKT*TMAHGT
Trigger: GGTGCCGTGGGCCATTGTGCAAGTCTTCCAGGCCGC...TGGAGCCTCACGTCTACTCCCTTCTGCAGATGAGGAAACCGAGAGAAGTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540068.6
CDS-3UTR CCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCGCACATCGGCACTACTaGTGCTGGGTAGACGGTAGC +
Preference number: 4 (lower is better)
Translates to: RFIKERPSSPGGAWVALAAHRHY*CWVDGS
Trigger: GCTACCGTCTACCCAGCACCAGTAGTGCCGATGTGC...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GGATGGAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCAGGCCTCATCTCAGATaGAGTCCCCTGGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GWRFIKERPSSPGGAWVARPHLR*SPLGRV
Trigger: CACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCT...GGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CAA 72 bp TTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTaGATGCAGCGGGAAAGGCCCTGGCCTTGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LGTGEAHKGIGI*MQRERPWPWGL
Trigger: CAGACCCCAAGGCCAGGGCCTTTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGTGGCCAGGACATCTTTGTaGCAGTCATGCAGAAACTCC +
Preference number: 4 (lower is better)
Translates to: ASRRTRPHLRWSPLGRVVARTSL*QSCRNS
Trigger: GGAGTTTCTGCATGACTGTCACAAAGATGTCCTGGC...CACCACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261861.10
CDS-3UTR TCA 90 bp GTGGCTGAGATAGCGGTGCTGAGACACACGCAGAGCATCCCTAGAAGCCATCAGGAACACCTCGCAGGCTaGCACATCCAGCCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: VAEIAVLRHTQSIPRSHQEHLAG*HIQPVL
Trigger: AAGCACGGGCTGGATGTGTCAGCCTGCGAGGTGTTC...CTGATGGCTTCTAGGGATGCTCTGCGTGTGTCTCAGCACCGCTATCTCAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GAAGAGACAGAAAGGAGCCGGGCCGCTCGCTGTCCTCGTCGGGTGAGGCAGGCTGGAGAAGTTAAGGGATaGGTAGAAACGACGGAGAGA +
Preference number: 4 (lower is better)
Translates to: EETERSRAARCPRRVRQAGEVKG*VETTER
Trigger: TCTCTCCGTCGTTTCTACTCATCCCTTAACTTCTCC...AGCCTGCCTCACCCGACGAGGACAGCGAGCGGCCCGGCTCCTTTCTGTCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGCAGCGGGAACTGTGGGGTACGGGGTaGGGAGGCCCTACTGTAGCT +
Preference number: 4 (lower is better)
Translates to: DLGTGEAHKGIGILMQRELWGTG*GGPTVA
Trigger: AGCTACAGTAGGGCCTCCTCACCCCGTACCCCACAG...TTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GGGCCACTTCTCTCGGTTTCCTCATCTGCAGAAGGGAGTAGACGTGAGGCTCCAGACACATCCAGCCCGTaGTTGGGCATGACCCCTAGG +
Preference number: 4 (lower is better)
Translates to: GPLLSVSSSAEGSRREAPDTSSP*LGMTPR
Trigger: CCTAGGGGTCATGCCCAAGCACGGGCTGGATGTGTC...TGGAGCCTCACGTCTACTCCCTTCTGCAGATGAGGAAACCGAGAGAAGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGTGAGACATTCCGGAACTTaGAGCTACGGTATTGCGGAC +
Preference number: 4 (lower is better)
Translates to: ASRRTRPHLRWSPLGRVVRHSGT*SYGIAD
Trigger: GTCCGCAATACCGTAGCTCCAAGTTCCGGAATGTCT...CACCACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp CTCAGCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTACCCGGTTCACTCTGTaGTTTTTGCAGTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSFQEDEASSQMESPGEGTRFTL*FLQLAS
Trigger: GGAGGCCAACTGCAAAAACCACAGAGTGAACCGGGT...ACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGCAGCGGGAAGCCTTTCTGCGGGGCTaGGGAGCGGAACTCCATGAG +
Preference number: 4 (lower is better)
Translates to: DLGTGEAHKGIGILMQREAFLRG*GAELHE
Trigger: CTCATGGAGTTCCGCTCCCCAGCCCCGCAGAAAGGC...TTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGTGCTGGCTCCGTGCCTaGTGTCATTGGGTAAATGTC +
Preference number: 4 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKCWLRA*CHWVNV
Trigger: GACATTTACCCAATGACACCAGGCACGGAGCCAGCA...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GTGGCTGAGATAGCGGTGCTGAGACACACGCAGAGCATCCCTAGAAGCCATCAGAGTGCTGAGATGTCCTaGCAGCCCCCTTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: VAEIAVLRHTQSIPRSHQSAEMS*QPPSQG
Trigger: CCCCTGTGAAGGGGGCTGCCAGGACATCTCAGCACT...CTGATGGCTTCTAGGGATGCTCTGCGTGTGTCTCAGCACCGCTATCTCAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GGGCCACTTCTCTCGGTTTCCTCATCTGCAGAAGGGAGTAGACGTGAGGCTCCACGGCACTACTGGTGCTaGGTAGACGGTAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GPLLSVSSSAEGSRREAPRHYWC*VDGSSG
Trigger: GCCACTGCTACCGTCTACCCAGCACCAGTAGTGCCG...TGGAGCCTCACGTCTACTCCCTTCTGCAGATGAGGAAACCGAGAGAAGTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp AGGGATTGGCATCTTGATGCAGCGGGAAAGGCCCTGGCCTTGGGGTCTGAACACAGTCGTAGCCAGCGCTaGACAGGATGTTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RDWHLDAAGKALALGSEHSRSQR*TGCCWW
Trigger: CCACCAACAACATCCTGTTCAGCGCTGGCTACGACT...GTGTTCAGACCCCAAGGCCAGGGCCTTTCCCGCTGCATCAAGATGCCAATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GTGGCTGAGATAGCGGTGCTGAGACACACGCAGAGCATCCCTAGAAGCCATCAGGGCTGCCGTCCGTGTTaGAGGACATGCAGAGGATCA +
Preference number: 4 (lower is better)
Translates to: VAEIAVLRHTQSIPRSHQGCRPC*RTCRGS
Trigger: TGATCCTCTGCATGTCCTTCAACACGGACGGCAGCC...CTGATGGCTTCTAGGGATGCTCTGCGTGTGTCTCAGCACCGCTATCTCAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GGGCCACTTCTCTCGGTTTCCTCATCTGCAGAAGGGAGTAGACGTGAGGCTCCAGGGAGCGGAACTCCATaGGGTAACTCAGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: GPLLSVSSSAEGSRREAPGSGTP*GNSGRA
Trigger: AGCCCTACCTGAGTTACCTCATGGAGTTCCGCTCCC...TGGAGCCTCACGTCTACTCCCTTCTGCAGATGAGGAAACCGAGAGAAGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GTGGCTGAGATAGCGGTGCTGAGACACACGCAGAGCATCCCTAGAAGCCATCAGGCACGGGATCTCGGTTaGTGCCTCCCAGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: VAEIAVLRHTQSIPRSHQARDLG*CLPAIH
Trigger: ATGAATGGCTGGGAGGCATCAACCGAGATCCCGTGC...CTGATGGCTTCTAGGGATGCTCTGCGTGTGTCTCAGCACCGCTATCTCAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp CTAGCTGTGGGGTACGGGGTGAGGAGGCCCTACTGTAGCTGGCTGGGAGGATGGGGAGAAGTTAAGGGATaGGTAGAAACGACGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LAVGYGVRRPYCSWLGGWGEVKG*VETTER
Trigger: TCTCTCCGTCGTTTCTACTCATCCCTTAACTTCTCC...CCATCCTCCCAGCCAGCTACAGTAGGGCCTCCTCACCCCGTACCCCACAGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp TACACTGTGGTACCTTCAGTGATGCTGAGAGCTCCAGGCGGGAGTGCTGAGATGTTGTTGGTGGTGGGGTaGCACTCGACCAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: YTVVPSVMLRAPGGSAEMLLVVG*HSTSPT
Trigger: TGTGGGGCTGGTCGAGTGGCACCCCACCACCAACAA...CATCTCAGCACTCCCGCCTGGAGCTCTCAGCATCACTGAAGGTACCACAGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGCGAATCTCATCCTGCTaGCGGAAGAACATTCGAAGG +
Preference number: 4 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKRISSC*RKNIRR
Trigger: CCTTCGAATGTTCTTCCGGCAGCAGGATGAGATTCG...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GGATGGAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCGGGATCACTGCAGCCTaGAGTCCAGCACTTACACTG +
Preference number: 4 (lower is better)
Translates to: GWRFIKERPSSPGGAWVAGITAA*SPALTL
Trigger: CAGTGTAAGTGCTGGACTGCAGGCTGCAGTGATCCC...GGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GGATGGAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCGTGGCATCTCAGAGTTaGGTGACCTTGGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: GWRFIKERPSSPGGAWVAVASQS*VTLGHF
Trigger: GAAGTGGCCCAAGGTCACGCAACTCTGAGATGCCAC...GGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGCAGCGGGAAATCCGGGGTCAGTGCTaGCTCCGTGCCTGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: DLGTGEAHKGIGILMQREIRGQC*LRAWCH
Trigger: ATGACACCAGGCACGGAGCCAGCACTGACCCCGGAT...TTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGAGAAAACAGCCCAGCTaGGGAGCTAACAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKRKQPS*GANSSW
Trigger: CCAAGAACTGTTAGCTCCCCAGCTGGGCTGTTTTCT...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCGGCAAGGGGTCATTATaGCCTTGGAGAGCAATCCTC +
Preference number: 4 (lower is better)
Translates to: RFIKERPSSPGGAWVALAGKGSL*PWRAIL
Trigger: GAGGATTGCTCTCCAAGGCCATAATGACCCCTTGCC...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCGGCAAGGGGTCATTATaGCCTTGGAGAGCAATCCTC +
Preference number: 4 (lower is better)
Translates to: EVHKGKAQLTWRGLGSPGGKGSL*PWRAIL
Trigger: GAGGATTGCTCTCCAAGGCCATAATGACCCCTTGCC...GCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GGGCCACTTCTCTCGGTTTCCTCATCTGCAGAAGGGAGTAGACGTGAGGCTCCACGTGCACATTCTTGGTaGTGGGGATCCCATCGAAGC +
Preference number: 4 (lower is better)
Translates to: GPLLSVSSSAEGSRREAPRAHSW*WGSHRS
Trigger: GCTTCGATGGGATCCCCATCACCAAGAATGTGCACG...TGGAGCCTCACGTCTACTCCCTTCTGCAGATGAGGAAACCGAGAGAAGTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp CTCAGCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTTGGACACCCATTTCTTaGTTTCCAGATCTCACCCCA +
Preference number: 4 (lower is better)
Translates to: LSFQEDEASSQMESPGEGWTPIS*FPDLTP
Trigger: TGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCCA...ACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp TACACTGTGGTACCTTCAGTGATGCTGAGAGCTCCAGGCGGGAGTGCTGAGATGATCCCATCGAAGCAGTaGTCCCGGTTGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: YTVVPSVMLRAPGGSAEMIPSKQ*SRLATF
Trigger: GAAGGTGGCCAACCGGGAGCACTGCTTCGATGGGAT...CATCTCAGCACTCCCGCCTGGAGCTCTCAGCATCACTGAAGGTACCACAGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCCAGAAGTGGTTGTCGTaGACATTCTTGGTGATGGGG +
Preference number: 4 (lower is better)
Translates to: RFIKERPSSPGGAWVALAQKWLS*TFLVMG
Trigger: CCCCATCACCAAGAATGTGCACGACAACCACTTCTG...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp ATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCCCCATTGCAACCCTCAGTCGCCGGCTGTGCCCGTaGAGCTCCAGGAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: IVDLLGDFISHFPIATLSRRLCP*SSRSAS
Trigger: GGAGGCGCTCCTGGAGCTGCACGGGCACAGCCGGCG...ACTGAGGGTTGCAATGGGGAAATGACTTATAAAGTCACCCAGCAGGTCAACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GGATGGAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCTCAGTGCTGGCTCCGTaGCTGGTGTCATTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: GWRFIKERPSSPGGAWVASVLAP*LVSLGK
Trigger: TTTACCCAATGACACCAGGCACGGAGCCAGCACTGA...GGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GTGGCTGAGATAGCGGTGCTGAGACACACGCAGAGCATCCCTAGAAGCCATCAGATGGAGAGGTCCTCCTaGTCCCAGAGGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: VAEIAVLRHTQSIPRSHQMERSS*SQRAIC
Trigger: ACAGATTGCCCTCTGGGACCAGGAGGACCTCTCCAT...CTGATGGCTTCTAGGGATGCTCTGCGTGTGTCTCAGCACCGCTATCTCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GGGCCACTTCTCTCGGTTTCCTCATCTGCAGAAGGGAGTAGACGTGAGGCTCCAATGGAGAGGTCCTCCTaGTCCCAGAGGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: GPLLSVSSSAEGSRREAPMERSS*SQRAIC
Trigger: ACAGATTGCCCTCTGGGACCAGGAGGACCTCTCCAT...TGGAGCCTCACGTCTACTCCCTTCTGCAGATGAGGAAACCGAGAGAAGTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp AGGGATTGGCATCTTGATGCAGCGGGAAAGGCCCTGGCCTTGGGGTCTGAACACATGCGGATGTCCTTCTaGGCCAGCTCCTCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: RDWHLDAAGKALALGSEHMRMSF*ASSSFN
Trigger: GTTGAAAGAGGAGCTGGCCCAGAAGGACATCCGCAT...GTGTTCAGACCCCAAGGCCAGGGCCTTTCCCGCTGCATCAAGATGCCAATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCTTTTTCAGTTCCAGCTaGAGCTGCCGAATGCGGATG +
Preference number: 4 (lower is better)
Translates to: RFIKERPSSPGGAWVALAFFSSS*SCRMRM
Trigger: CATCCGCATTCGGCAGCTCCAGCTGGAACTGAAAAA...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCTTTTTCAGTTCCAGCTaGAGCTGCCGAATGCGGATG +
Preference number: 4 (lower is better)
Translates to: EVHKGKAQLTWRGLGSPGFFSSS*SCRMRM
Trigger: CATCCGCATTCGGCAGCTCCAGCTGGAACTGAAAAA...GCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GAGCTTTGTAGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTTGGAGAGCCCCCCACTCCTGTCCTaGCTCTGTCTCTGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: ELCRESWGRQGVIMALESPPLLS*LCLWGH
Trigger: GTGACCCCAGAGACAGAGCCAGGACAGGAGTGGGGG...GCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp AGGGATTGGCATCTTGATGCAGCGGGAAAGGCCCTGGCCTTGGGGTCTGAACACCAGGAGGTTAGAGGTTaGCTTCCAGTTCTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: RDWHLDAAGKALALGSEHQEVRG*LPVLEV
Trigger: CACCTCGAGAACTGGAAGCCAACCTCTAACCTCCTG...GTGTTCAGACCCCAAGGCCAGGGCCTTTCCCGCTGCATCAAGATGCCAATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GTGGCTGAGATAGCGGTGCTGAGACACACGCAGAGCATCCCTAGAAGCCATCAGCTCAACTGGGCAGTGTaGCACATCGGCACTACTGGT +
Preference number: 4 (lower is better)
Translates to: VAEIAVLRHTQSIPRSHQLNWAV*HIGTTG
Trigger: ACCAGTAGTGCCGATGTGCCACACTGCCCAGTTGAG...CTGATGGCTTCTAGGGATGCTCTGCGTGTGTCTCAGCACCGCTATCTCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CAA 72 bp CAAGTTCTAAGTCTAGCTGGGATCCCGCTTCCCCTCTaGCTTCCTGGTCCACTGAGATGGAGCCCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: QVLSLAGIPLPL*LPGPLRWSPCQ
Trigger: TTGGCAGGGGCTCCATCTCAGTGGACCAGGAAGCAAGAGGGGAAGCGGGATCCCAGCTAGACTTAGAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp ATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCCCCATTGCAACCCTCAGTGCTGTCCTCGTCGGGTaGGGCAGGCTTCCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: IVDLLGDFISHFPIATLSAVLVG*GRLPGL
Trigger: CAGCCCCGGAAGCCTGCCTCACCCGACGAGGACAGC...ACTGAGGGTTGCAATGGGGAAATGACTTATAAAGTCACCCAGCAGGTCAACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GGACACCCATTTCTTGATTTCCAGATCTCACCCCAAACTGTGACTCTTCTGAGAGAAGGAGCCGCCCCCTaGGCTCTCGGTGACGATGGC +
Preference number: 4 (lower is better)
Translates to: GHPFLDFQISPQTVTLLREGAAP*ALGDDG
Trigger: GCCATCGTCACCGAGAGCGCAGGGGGCGGCTCCTTC...TCTCAGAAGAGTCACAGTTTGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCTCACTCTGTGGTTTTTaGAGTTGGCCTCCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: RFIKERPSSPGGAWVALASLCGF*SWPPAE
Trigger: TTCTGCAGGAGGCCAACTGCAAAAACCACAGAGTGA...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGAGTTCTTGGGGCTGTTaGGCAAGTTTTTCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKSSWGC*ASFSVP
Trigger: TGGAACTGAAAAACTTGCGCAACAGCCCCAAGAACT...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGTGTGGTCATTCTACGTaGATAAGGCTGAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKCGHST*IRLKVA
Trigger: AGCCACTTTCAGCCTTATGCACGTAGAATGACCACA...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp AGTGGCTTCCAGTTCTCATTCTCCATAGAGACTTGGGCACTGGTGAAGCCCACACTTCGATCAGGGGCATaGAGAGGTCCTCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SGFQFSFSIETWALVKPTLRSGA*RGPPGP
Trigger: GGGACCAGGAGGACCTCTCCATGCCCCTGATCGAAG...TGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAATGAGAACTGGAAGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GAGCTTTGTAGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTTGGAGAGCCTTCGATCAGGGGCATaGAGAGGTCCTCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: ELCRESWGRQGVIMALESLRSGA*RGPPGP
Trigger: GGGACCAGGAGGACCTCTCCATGCCCCTGATCGAAG...GCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GAGCTTTGTAGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTTGGAGAGCATCCGGGGTCAGTGCTaGCTCCGTGCCTGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: ELCRESWGRQGVIMALESIRGQC*LRAWCH
Trigger: ATGACACCAGGCACGGAGCCAGCACTGACCCCGGAT...GCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCCCCCCACTCCTGTCCTaGCTCTGTCTCTGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSPPLLS*LCLWGH
Trigger: GTGACCCCAGAGACAGAGCCAGGACAGGAGTGGGGG...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GGTCTTGGTCGTGGGCCCATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCCCTGGTCCACTGAGATaGAGCCCCTGCCAACCCCAG +
Preference number: 4 (lower is better)
Translates to: GLGRGPIVDLLGDFISHFPGPLR*SPCQPQ
Trigger: CTGGGGTTGGCAGGGGCTCCATCTCAGTGGACCAGG...GAAATGACTTATAAAGTCACCCAGCAGGTCAACAATGGGCCCACGACCAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCAAAGCTCCAGAAATGTaGGAGGAGGAGATGAGTGCT +
Preference number: 4 (lower is better)
Translates to: EVHKGKAQLTWRGLGSPGKAPEM*EEEMSA
Trigger: AGCACTCATCTCCTCCTCCCACATTTCTGGAGCTTT...GCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGCAGCGGGAACATCCAGGTTCCAGATaGGGACCTTGTAGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: DLGTGEAHKGIGILMQREHPGSR*GPCSRS
Trigger: GCTACGACTACAAGGTCCTCATCTGGAACCTGGATG...TTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GGTCTTGGTCGTGGGCCCATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCGAACACCTCGCAGGCTaGCACATCCAGCCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: GLGRGPIVDLLGDFISHFEHLAG*HIQPVL
Trigger: AAGCACGGGCTGGATGTGTCAGCCTGCGAGGTGTTC...GAAATGACTTATAAAGTCACCCAGCAGGTCAACAATGGGCCCACGACCAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp CTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGTGCTGTCCTCGTCGGGTaGGGCAGGCTTCCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LTPNCDSSENSVYKLFVRAVLVG*GRLPGL
Trigger: CAGCCCCGGAAGCCTGCCTCACCCGACGAGGACAGC...ACGCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GAGCTTTGTAGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTTGGAGAGCGGAGGAGATGAGTGCTaGCACTGTCTAGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ELCRESWGRQGVIMALESGGDEC*HCLAVG
Trigger: CCCCACAGCTAGACAGTGTCAGCACTCATCTCCTCC...GCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp AGTGGCTTCCAGTTCTCATTCTCCATAGAGACTTGGGCACTGGTGAAGCCCACATCAATCCTGCCTGTCTaGTCCAGGGGGATGACGAGG +
Preference number: 4 (lower is better)
Translates to: SGFQFSFSIETWALVKPTSILPV*SRGMTR
Trigger: CCTCGTCATCCCCCTGGAGCAGACAGGCAGGATTGA...TGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAATGAGAACTGGAAGCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp CTCCATAGAGACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGGGTGGCCGCAGACCTTaGGGTAGTTGGGTTCAATCC +
Preference number: 4 (lower is better)
Translates to: LHRDLGTGEAHKGIGILMGGRRP*GSWVQS
Trigger: GGATTGAACCCAACTACCCCAAGGTCTGCGGCCACC...CATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGCAGCGGGAAACCCGGTTCACTCTGTaGTTTTTGCAGTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: DLGTGEAHKGIGILMQRETRFTL*FLQLAS
Trigger: GGAGGCCAACTGCAAAAACCACAGAGTGAACCGGGT...TTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp TACACTGTGGTACCTTCAGTGATGCTGAGAGCTCCAGGCGGGAGTGCTGAGATGTGCTGGCTCCGTGCCTaGTGTCATTGGGTAAATGTC +
Preference number: 4 (lower is better)
Translates to: YTVVPSVMLRAPGGSAEMCWLRA*CHWVNV
Trigger: GACATTTACCCAATGACACCAGGCACGGAGCCAGCA...CATCTCAGCACTCCCGCCTGGAGCTCTCAGCATCACTGAAGGTACCACAGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GTGGCTGAGATAGCGGTGCTGAGACACACGCAGAGCATCCCTAGAAGCCATCAGTTCTCCATAGAGACTTaGGCACTGGTGAAGCCCACA +
Preference number: 4 (lower is better)
Translates to: VAEIAVLRHTQSIPRSHQFSIET*ALVKPT
Trigger: TGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAA...CTGATGGCTTCTAGGGATGCTCTGCGTGTGTCTCAGCACCGCTATCTCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp TTCCGTAGGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGAGAAGCCATCAGACCCTaGTCTGCCTTCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FRRAAMGKAGMEYNASSREAIRP*SAFPRA
Trigger: GGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTC...TCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCCTACGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp AGTGGCTTCCAGTTCTCATTCTCCATAGAGACTTGGGCACTGGTGAAGCCCACAAGGCCCTACTGTAGCTaGCTGGGAGGATGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: SGFQFSFSIETWALVKPTRPYCS*LGGWRF
Trigger: GAACCTCCATCCTCCCAGCCAGCTACAGTAGGGCCT...TGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAATGAGAACTGGAAGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp ATCTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCCCCCTGCGCTCTCGGTaGCGATGGCCAGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: ISPQTVTLLRTVFINSLCPLRSR*RWPGSG
Trigger: CCCGCTTCCTGGCCATCGTCACCGAGAGCGCAGGGG...GCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp AGTGGCTTCCAGTTCTCATTCTCCATAGAGACTTGGGCACTGGTGAAGCCCACAAGTCGTAGCCAGCGCTaGACAGGATGTTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGFQFSFSIETWALVKPTSRSQR*TGCCWW
Trigger: CCACCAACAACATCCTGTTCAGCGCTGGCTACGACT...TGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAATGAGAACTGGAAGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GAGCTTTGTAGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTTGGAGAGCAGACTTGGGCACTGGTaGAGCCCACAAAGGGATTGG +
Preference number: 4 (lower is better)
Translates to: ELCRESWGRQGVIMALESRLGHW*SPQRDW
Trigger: CCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTCT...GCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp TTCCGTAGGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATTGTTGGTGGTGGGGTaGCACTCGACCAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: FRRAAMGKAGMEYNASSRLLVVG*HSTSPT
Trigger: TGTGGGGCTGGTCGAGTGGCACCCCACCACCAACAA...TCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCCTACGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp TTCCGTAGGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATTCATCCGGGGTCAGTaGTGGCTCCGTGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: FRRAAMGKAGMEYNASSRFIRGQ*WLRAWC
Trigger: ACACCAGGCACGGAGCCAGCACTGACCCCGGATGAA...TCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCCTACGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp TACACTGTGGTACCTTCAGTGATGCTGAGAGCTCCAGGCGGGAGTGCTGAGATGCGAATCTCATCCTGCTaGCGGAAGAACATTCGAAGG +
Preference number: 4 (lower is better)
Translates to: YTVVPSVMLRAPGGSAEMRISSC*RKNIRR
Trigger: CCTTCGAATGTTCTTCCGGCAGCAGGATGAGATTCG...CATCTCAGCACTCCCGCCTGGAGCTCTCAGCATCACTGAAGGTACCACAGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GGATGGAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCGCAGAAACTTTAAAGTaGTATACGGATGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GWRFIKERPSSPGGAWVAAETLK*YTDASG
Trigger: GCCACTCGCATCCGTATAGCACTTTAAAGTTTCTGC...GGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GAAGAGACAGAAAGGAGCCGGGCCGCTCGCTGTCCTCGTCGGGTGAGGCAGGCTTTTATAAACTCTTTGTaGGTAGTGGGAAATGAAAGG +
Preference number: 4 (lower is better)
Translates to: EETERSRAARCPRRVRQAFINSL*VVGNER
Trigger: CCTTTCATTTCCCACTACGCACAAAGAGTTTATAAA...AGCCTGCCTCACCCGACGAGGACAGCGAGCGGCCCGGCTCCTTTCTGTCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GGACACCCATTTCTTGATTTCCAGATCTCACCCCAAACTGTGACTCTTCTGAGATCCAGCACATTGCCCTaGTGGCCGCAGACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GHPFLDFQISPQTVTLLRSSTLP*WPQTLG
Trigger: CCCCAAGGTCTGCGGCCACCAGGGCAATGTGCTGGA...TCTCAGAAGAGTCACAGTTTGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GTGGCTGAGATAGCGGTGCTGAGACACACGCAGAGCATCCCTAGAAGCCATCAGGGAGCTAACAGTTCTTaGGGCTGTTGCGCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: VAEIAVLRHTQSIPRSHQGANSS*GCCASF
Trigger: AAAACTTGCGCAACAGCCCCAAGAACTGTTAGCTCC...CTGATGGCTTCTAGGGATGCTCTGCGTGTGTCTCAGCACCGCTATCTCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGCAGCGGGAAAGCTGGCTGGGAGGATaGAGGTTCATAAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: DLGTGEAHKGIGILMQRESWLGG*RFIKER
Trigger: CCTTTCCTTTATGAACCTCCATCCTCCCAGCCAGCT...TTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GGTCTTGGTCGTGGGCCCATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCAGGCCCTACTGTAGCTaGCTGGGAGGATGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GLGRGPIVDLLGDFISHFRPYCS*LGGWRF
Trigger: GAACCTCCATCCTCCCAGCCAGCTACAGTAGGGCCT...GAAATGACTTATAAAGTCACCCAGCAGGTCAACAATGGGCCCACGACCAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp CTCCATAGAGACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGAGGGCTTCTCAGTGCTaGTCTCGTAGTACCGGATGT +
Preference number: 4 (lower is better)
Translates to: LHRDLGTGEAHKGIGILMRASQC*SRSTGC
Trigger: ACATCCGGTACTACGAGATCAGCACTGAGAAGCCCT...CATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GAGCTTTGTAGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTTGGAGAGCAGGGCTTCTCAGTGCTaGTCTCGTAGTACCGGATGT +
Preference number: 4 (lower is better)
Translates to: ELCRESWGRQGVIMALESRASQC*SRSTGC
Trigger: ACATCCGGTACTACGAGATCAGCACTGAGAAGCCCT...GCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp TACACTGTGGTACCTTCAGTGATGCTGAGAGCTCCAGGCGGGAGTGCTGAGATGTGGACACCCATTTCTTaGTTTCCAGATCTCACCCCA +
Preference number: 4 (lower is better)
Translates to: YTVVPSVMLRAPGGSAEMWTPIS*FPDLTP
Trigger: TGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCCA...CATCTCAGCACTCCCGCCTGGAGCTCTCAGCATCACTGAAGGTACCACAGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCAGTTGGGTTCAATCCTaGCTGTCTGCTCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSSWVQS*LSAPGG
Trigger: TCCCCCTGGAGCAGACAGGCAGGATTGAACCCAACT...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCAATGGGAAAAGGGTGTaGAAGAGCTTTGTAGAGAAT +
Preference number: 4 (lower is better)
Translates to: EVHKGKAQLTWRGLGSPGNGKRV*KSFVEN
Trigger: ATTCTCTACAAAGCTCTTGCACACCCTTTTCCCATT...GCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCCATCGGCACTACTGGTaGTGGGTAGACGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSHRHYW*WVDGSS
Trigger: ACTGCTACCGTCTACCCAGCACCAGTAGTGCCGATG...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGTGTTTATAAACTCTTTGTaGGTAGTGGGAAATGAAAGG +
Preference number: 4 (lower is better)
Translates to: ASRRTRPHLRWSPLGRVVFINSL*VVGNER
Trigger: CCTTTCATTTCCCACTACGCACAAAGAGTTTATAAA...CACCACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GAGCTTTGTAGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTTGGAGAGCTGTGGTTTTTGCAGTTaGCCTCCTGCAGAACACGGC +
Preference number: 4 (lower is better)
Translates to: ELCRESWGRQGVIMALESCGFCS*PPAEHG
Trigger: GCCGTGTTCTGCAGGAGGCCAACTGCAAAAACCACA...GCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GGTCTTGGTCGTGGGCCCATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCCTCAACTGGGCAGTGTaGCACATCGGCACTACTGGT +
Preference number: 4 (lower is better)
Translates to: GLGRGPIVDLLGDFISHFLNWAV*HIGTTG
Trigger: ACCAGTAGTGCCGATGTGCCACACTGCCCAGTTGAG...GAAATGACTTATAAAGTCACCCAGCAGGTCAACAATGGGCCCACGACCAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GGTCTTGGTCGTGGGCCCATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCTCCGTAGGGCGGCCATaGGAAAAGCAGGTATGGAGT +
Preference number: 4 (lower is better)
Translates to: GLGRGPIVDLLGDFISHFSVGRP*EKQVWS
Trigger: ACTCCATACCTGCTTTTCCCATGGCCGCCCTACGGA...GAAATGACTTATAAAGTCACCCAGCAGGTCAACAATGGGCCCACGACCAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGCAGCGGGAAAAAGCTCCAGAAATGTaGGAGGAGGAGATGAGTGCT +
Preference number: 4 (lower is better)
Translates to: DLGTGEAHKGIGILMQREKAPEM*EEEMSA
Trigger: AGCACTCATCTCCTCCTCCCACATTTCTGGAGCTTT...TTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp TTCCGTAGGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGAAGTTGGGTTCAATCCTaGCTGTCTGCTCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: FRRAAMGKAGMEYNASSRSWVQS*LSAPGG
Trigger: TCCCCCTGGAGCAGACAGGCAGGATTGAACCCAACT...TCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCCTACGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp AGTGGCTTCCAGTTCTCATTCTCCATAGAGACTTGGGCACTGGTGAAGCCCACACGTCGAATCTCATCCTaGTGCCGGAAGAACATTCGA +
Preference number: 4 (lower is better)
Translates to: SGFQFSFSIETWALVKPTRRISS*CRKNIR
Trigger: TCGAATGTTCTTCCGGCAGCAGGATGAGATTCGACG...TGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAATGAGAACTGGAAGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp TTCCGTAGGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGAAGTTCCAGCTGGAGCTaGCGAATGCGGATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: FRRAAMGKAGMEYNASSRSSSWS*RMRMSF
Trigger: GAAGGACATCCGCATTCGGCAGCTCCAGCTGGAACT...TCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCCTACGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp TTCCGTAGGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGACATCGGCACTACTGGTaGTGGGTAGACGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: FRRAAMGKAGMEYNASSRHRHYW*WVDGSS
Trigger: ACTGCTACCGTCTACCCAGCACCAGTAGTGCCGATG...TCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCCTACGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp TTCCGTAGGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGAGTGGCATCTCAGAGTTaGGTGACCTTGGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: FRRAAMGKAGMEYNASSRVASQS*VTLGHF
Trigger: GAAGTGGCCCAAGGTCACGCAACTCTGAGATGCCAC...TCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCCTACGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GAGCTTTGTAGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTTGGAGAGCAGACATTCCGGAACTTaGAGCTACGGTATTGCGGAC +
Preference number: 4 (lower is better)
Translates to: ELCRESWGRQGVIMALESRHSGT*SYGIAD
Trigger: GTCCGCAATACCGTAGCTCCAAGTTCCGGAATGTCT...GCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GAGCTTTGTAGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTTGGAGAGCAGACCTTGGGGTAGTTaGGTTCAATCCTGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: ELCRESWGRQGVIMALESRPWGS*VQSCLS
Trigger: AGACAGGCAGGATTGAACCCAACTACCCCAAGGTCT...GCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp CTCCATAGAGACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGAGTTCTAAGTCTAGCTaGGATCCCGCTTCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: LHRDLGTGEAHKGIGILMSSKSS*DPASPL
Trigger: AAGAGGGGAAGCGGGATCCCAGCTAGACTTAGAACT...CATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp ATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCCCCATTGCAACCCTCAGTAGGCCTCATCTCAGATaGAGTCCCCTGGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: IVDLLGDFISHFPIATLSRPHLR*SPLGRV
Trigger: CACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCT...ACTGAGGGTTGCAATGGGGAAATGACTTATAAAGTCACCCAGCAGGTCAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GGTCTTGGTCGTGGGCCCATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCTTGGAGCTACGGTATTaGGGACGCCAGGACATCTTT +
Preference number: 4 (lower is better)
Translates to: GLGRGPIVDLLGDFISHFLELRY*GRQDIF
Trigger: AAAGATGTCCTGGCGTCCGCAATACCGTAGCTCCAA...GAAATGACTTATAAAGTCACCCAGCAGGTCAACAATGGGCCCACGACCAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261861.10
CDS-3UTR GCA 90 bp GGACACCCATTTCTTGATTTCCAGATCTCACCCCAAACTGTGACTCTTCTGAGACGAAAGAGGGATCACTaGAGCCTGCAGTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: GHPFLDFQISPQTVTLLRRKRDH*SLQSST
Trigger: AGTGCTGGACTGCAGGCTGCAGTGATCCCTCTTTCG...TCTCAGAAGAGTCACAGTTTGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GAGCTTTGTAGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTTGGAGAGCCGTGCCTGGTGTCATTaGGTAAATGTCTTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: ELCRESWGRQGVIMALESRAWCH*VNVFLV
Trigger: TACCAGGAAGACATTTACCCAATGACACCAGGCACG...GCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCAGAAAACAGCCCAGCTaGGGAGCTAACAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSRKQPS*GANSSW
Trigger: CCAAGAACTGTTAGCTCCCCAGCTGGGCTGTTTTCT...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp CTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGTGGGAGCGGAACTCCATaGGGTAACTCAGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LTPNCDSSENSVYKLFVRGSGTP*GNSGRA
Trigger: AGCCCTACCTGAGTTACCTCATGGAGTTCCGCTCCC...ACGCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp AGTGGCTTCCAGTTCTCATTCTCCATAGAGACTTGGGCACTGGTGAAGCCCACAGGACTTTTATTAGCATaGGGTCAGGAGGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: SGFQFSFSIETWALVKPTGLLLA*GQEVRG
Trigger: ACCTCTAACCTCCTGACCTCATGCTAATAAAAGTCC...TGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAATGAGAACTGGAAGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp CTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGTATCCCATCGAAGCAGTaGTCCCGGTTGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: LTPNCDSSENSVYKLFVRIPSKQ*SRLATF
Trigger: GAAGGTGGCCAACCGGGAGCACTGCTTCGATGGGAT...ACGCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCTCACTCTGTGGTTTTTaGAGTTGGCCTCCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSSLCGF*SWPPAE
Trigger: TTCTGCAGGAGGCCAACTGCAAAAACCACAGAGTGA...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp ATCTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCTTCATCCGGGGTCAGTaGTGGCTCCGTGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: ISPQTVTLLRTVFINSLCFIRGQ*WLRAWC
Trigger: ACACCAGGCACGGAGCCAGCACTGACCCCGGATGAA...GCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp AGTGGCTTCCAGTTCTCATTCTCCATAGAGACTTGGGCACTGGTGAAGCCCACAAGTTCTTGGGGCTGTTaGGCAAGTTTTTCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SGFQFSFSIETWALVKPTSSWGC*ASFSVP
Trigger: TGGAACTGAAAAACTTGCGCAACAGCCCCAAGAACT...TGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAATGAGAACTGGAAGCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCAAAGTGCTATACGGATaGGAGTGGCTGTGGTCATTC +
Preference number: 4 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSKVLYG*EWLWSF
Trigger: GAATGACCACAGCCACTCGCATCCGTATAGCACTTT...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp ATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCCCCATTGCAACCCTCAGTTTGGAGCTACGGTATTaGGGACGCCAGGACATCGCT +
Preference number: 4 (lower is better)
Translates to: IVDLLGDFISHFPIATLSLELRY*GRQDIA
Trigger: AGCGATGTCCTGGCGTCCGCAATACCGTAGCTCCAA...ACTGAGGGTTGCAATGGGGAAATGACTTATAAAGTCACCCAGCAGGTCAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540068.6
CDS-3UTR CCA 90 bp CTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGTAGCAGTGCTCCCGGTTaGCCACCTTCCCGTAGACAT +
Preference number: 4 (lower is better)
Translates to: LTPNCDSSENSVYKLFVRSSAPG*PPSRRH
Trigger: ATGTCTACGGGAAGGTGGCCAACCGGGAGCACTGCT...ACGCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCAGGATCACATCCGTGTaGCAGTCAATCATCTTCACC +
Preference number: 4 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSRITSV*QSIIFT
Trigger: GGTGAAGATGATTGACTGCCACACGGATGTGATCCT...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp ATCTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCCGGCACTACTGGTGCTaGGTAGACGGTAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: ISPQTVTLLRTVFINSLCRHYWC*VDGSSG
Trigger: GCCACTGCTACCGTCTACCCAGCACCAGTAGTGCCG...GCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
3UTR CAA 72 bp AGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTaGGAGAGCAATCCTCTGAATTCCCTGAAGACAAGA +
Preference number: 4 (lower is better)
Translates to: RESWGRQGVIMA*ESNPLNSLKTR
Trigger: TCTTGTCTTCAGGGAATTCAGAGGATTGCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp ATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCCCCATTGCAACCCTCAGTTCAGTGCTGGCTCCGTaGCTGGTGTCATTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: IVDLLGDFISHFPIATLSSVLAP*LVSLGK
Trigger: TTTACCCAATGACACCAGGCACGGAGCCAGCACTGA...ACTGAGGGTTGCAATGGGGAAATGACTTATAAAGTCACCCAGCAGGTCAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GGACACCCATTTCTTGATTTCCAGATCTCACCCCAAACTGTGACTCTTCTGAGAAGTTCTAAGTCTAGCTaGGATCCCGCTTCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: GHPFLDFQISPQTVTLLRSSKSS*DPASPL
Trigger: AAGAGGGGAAGCGGGATCCCAGCTAGACTTAGAACT...TCTCAGAAGAGTCACAGTTTGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp GGACACCCATTTCTTGATTTCCAGATCTCACCCCAAACTGTGACTCTTCTGAGATTCTCCATAGAGACTTaGGCACTGGTGAAGCCCACA +
Preference number: 4 (lower is better)
Translates to: GHPFLDFQISPQTVTLLRFSIET*ALVKPT
Trigger: TGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAA...TCTCAGAAGAGTCACAGTTTGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp CTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGTCATCCAGGTTCCAGATaGGGACCTTGTAGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: LTPNCDSSENSVYKLFVRHPGSR*GPCSRS
Trigger: GCTACGACTACAAGGTCCTCATCTGGAACCTGGATG...ACGCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp CTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGTATGCGGATGTCCTTCTaGGCCAGCTCCTCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: LTPNCDSSENSVYKLFVRMRMSF*ASSSFN
Trigger: GTTGAAAGAGGAGCTGGCCCAGAAGGACATCCGCAT...ACGCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp GGACACCCATTTCTTGATTTCCAGATCTCACCCCAAACTGTGACTCTTCTGAGAGGACTTTTATTAGCATaGGGTCAGGAGGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: GHPFLDFQISPQTVTLLRGLLLA*GQEVRG
Trigger: ACCTCTAACCTCCTGACCTCATGCTAATAAAAGTCC...TCTCAGAAGAGTCACAGTTTGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp CTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGTCAGAAGTGGTTGTCGTaGACATTCTTGGTGATGGGG +
Preference number: 4 (lower is better)
Translates to: LTPNCDSSENSVYKLFVRQKWLS*TFLVMG
Trigger: CCCCATCACCAAGAATGTGCACGACAACCACTTCTG...ACGCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp ATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCCCCATTGCAACCCTCAGTCGTGCCTGGTGTCATTaGGTAAATGTCTTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: IVDLLGDFISHFPIATLSRAWCH*VNVFLV
Trigger: TACCAGGAAGACATTTACCCAATGACACCAGGCACG...ACTGAGGGTTGCAATGGGGAAATGACTTATAAAGTCACCCAGCAGGTCAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp ATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCCCCATTGCAACCCTCAGTGGAGCTAACAGTTCTTaGGGCTGTTGCGCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: IVDLLGDFISHFPIATLSGANSS*GCCASF
Trigger: AAAACTTGCGCAACAGCCCCAAGAACTGTTAGCTCC...ACTGAGGGTTGCAATGGGGAAATGACTTATAAAGTCACCCAGCAGGTCAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp ATCTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCCAGGAGGTTAGAGGTTaGCTTCCAGTTCTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: ISPQTVTLLRTVFINSLCQEVRG*LPVLEV
Trigger: CACCTCGAGAACTGGAAGCCAACCTCTAACCTCCTG...GCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp CTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGTAGCTGGCTGGGAGGATaGAGGTTCATAAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LTPNCDSSENSVYKLFVRSWLGG*RFIKER
Trigger: CCTTTCCTTTATGAACCTCCATCCTCCCAGCCAGCT...ACGCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp ATCTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCCGTCGAATCTCATCCTaGTGCCGGAAGAACATTCGA +
Preference number: 4 (lower is better)
Translates to: ISPQTVTLLRTVFINSLCRRISS*CRKNIR
Trigger: TCGAATGTTCTTCCGGCAGCAGGATGAGATTCGACG...GCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp CTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGTAAAGTGCTATACGGATaGGAGTGGCTGTGGTCATTC +
Preference number: 4 (lower is better)
Translates to: LTPNCDSSENSVYKLFVRKVLYG*EWLWSF
Trigger: GAATGACCACAGCCACTCGCATCCGTATAGCACTTT...ACGCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp ATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCCCCATTGCAACCCTCAGTGCAGAAACTTTAAAGTaGTATACGGATGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: IVDLLGDFISHFPIATLSAETLK*YTDASG
Trigger: GCCACTCGCATCCGTATAGCACTTTAAAGTTTCTGC...ACTGAGGGTTGCAATGGGGAAATGACTTATAAAGTCACCCAGCAGGTCAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp CTCCATAGAGACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGTATGTGTCAAAGGACTaGAGAAACTTTAAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: LHRDLGTGEAHKGIGILMYVSKD*RNFKVL
Trigger: TAGCACTTTAAAGTTTCTGCAGTCCTTTGACACATA...CATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp AGTGGCTTCCAGTTCTCATTCTCCATAGAGACTTGGGCACTGGTGAAGCCCACATATGTGTCAAAGGACTaGAGAAACTTTAAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: SGFQFSFSIETWALVKPTYVSKD*RNFKVL
Trigger: TAGCACTTTAAAGTTTCTGCAGTCCTTTGACACATA...TGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAATGAGAACTGGAAGCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CCA 90 bp CTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGTAGGATCACATCCGTGTaGCAGTCAATCATCTTCACC +
Preference number: 4 (lower is better)
Translates to: LTPNCDSSENSVYKLFVRRITSV*QSIIFT
Trigger: GGTGAAGATGATTGACTGCCACACGGATGTGATCCT...ACGCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR TCA 90 bp ATCTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCTGCATTTATAATAGATaGGCCTCCTTCGCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: ISPQTVTLLRTVFINSLCCIYNR*ASFAAG
Trigger: TCCTGCGGCGAAGGAGGCTCATCTATTATAAATGCA...GCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261861.10
CDS-3UTR GCA 90 bp GGACACCCATTTCTTGATTTCCAGATCTCACCCCAAACTGTGACTCTTCTGAGAAATGGGAAAAGGGTGTaGAAGAGCTTTGTAGAGAAT +
Preference number: 4 (lower is better)
Translates to: GHPFLDFQISPQTVTLLRNGKRV*KSFVEN
Trigger: ATTCTCTACAAAGCTCTTGCACACCCTTTTCCCATT...TCTCAGAAGAGTCACAGTTTGGGGTGAGATCTGGAAATCAAGAAATGGGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR GCA 90 bp CTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGTTGTGGTCATTCTACGTaGATAAGGCTGAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LTPNCDSSENSVYKLFVRCGHST*IRLKVA
Trigger: AGCCACTTTCAGCCTTATGCACGTAGAATGACCACA...ACGCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS GCA 90 bp TTGTTGGTGGTGGGGTGCCACTCGACCAGCCCCACACGCCGGCTGTaGCCGTGCAGCTCCAGGAGCGCCTCCGTCATGTTCCGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LLVVGCHSTSPTRRL*PCSSRSASVMFRFS
Trigger: GCTGAAGCGGAACATGACGGAGGCGCTCCTGGAGCTGCACGGGCACAGCCGGCGTGTGGGGCTGGTCGAGTGGCACCCCACCACCAACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS-3UTR CAA 90 bp CTCAGCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGAAAGGCCCTGGCCTaGGGGTCTGAACACCCAGGG +
Preference number: 5 (lower is better)
Translates to: LSFQEDEASSQMESPGEGGKALA*GSEHPG
Trigger: CCCTGGGTGTTCAGACCCCAAGGCCAGGGCCTTTCC...ACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GAAGAGACAGAAAGGAGCCGGGCCGCTCGCTGTCCTCGTCGGGTGAGGCAGGCTTTGGTCGTGGGCCCATaGTTGACCTGCTGGGTGACT +
Preference number: 5 (lower is better)
Translates to: EETERSRAARCPRRVRQALVVGP*LTCWVT
Trigger: AGTCACCCAGCAGGTCAACAATGGGCCCACGACCAA...AGCCTGCCTCACCCGACGAGGACAGCGAGCGGCCCGGCTCCTTTCTGTCTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GGATGGAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCGGAAAGGCCCTGGCCTaGGGGTCTGAACACCCAGGG +
Preference number: 5 (lower is better)
Translates to: GWRFIKERPSSPGGAWVAGKALA*GSEHPG
Trigger: CCCTGGGTGTTCAGACCCCAAGGCCAGGGCCTTTCC...GGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GAAGAGACAGAAAGGAGCCGGGCCGCTCGCTGTCCTCGTCGGGTGAGGCAGGCTAAAGGGATTGGCATCTaGATGCAGCGGGAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: EETERSRAARCPRRVRQAKGIGI*MQRERP
Trigger: GGGCCTTTCCCGCTGCATCAAGATGCCAATCCCTTT...AGCCTGCCTCACCCGACGAGGACAGCGAGCGGCCCGGCTCCTTTCTGTCTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS CCA 90 bp AGCAGTGCTCCCGGTTGGCCACCTTCCCGTAGACATTCCGGAACTTaGAGCTACGGTATTGCGGACGCCAGGACATCAGGTGGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SSAPGWPPSRRHSGT*SYGIADARTSGGAP
Trigger: AGGAGCCCCACCTGATGTCCTGGCGTCCGCAATACCGTAGCTCCAAGTTCCGGAATGTCTACGGGAAGGTGGCCAACCGGGAGCACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543950.3
CDS-3UTR CAA 90 bp GCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGTGCTTGGAGCTACGGTATaGCGGACGCCAGGACATCTT +
Preference number: 5 (lower is better)
Translates to: ASRRTRPHLRWSPLGRVVLGATV*RTPGHL
Trigger: AAGATGTCCTGGCGTCCGCAATACCGTAGCTCCAAG...CACCACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261861.10
CDS-3UTR CAA 90 bp GGATGGAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCACATCCAGCCCGTGCTaGGGCATGACCCCTAGGCCT +
Preference number: 5 (lower is better)
Translates to: GWRFIKERPSSPGGAWVATSSPC*GMTPRP
Trigger: AGGCCTAGGGGTCATGCCCAAGCACGGGCTGGATGT...GGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp CTCAGCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTATCCCGCTTCCCCTCTaGCTTCCTGGTCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: LSFQEDEASSQMESPGEGIPLPL*LPGPLR
Trigger: TCTCAGTGGACCAGGAAGCAAGAGGGGAAGCGGGAT...ACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCTTGATATCCAGCACATaGCCCTGGTGGCCGCAGACC +
Preference number: 5 (lower is better)
Translates to: RFIKERPSSPGGAWVALALISST*PWWPQT
Trigger: GGTCTGCGGCCACCAGGGCAATGTGCTGGATATCAA...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp CTCAGCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTATCACACGCAGCTTCTaGTCCTTGCACGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LSFQEDEASSQMESPGEGITRSF*SLHVVV
Trigger: CACCACCACGTGCAAGGACAAGAAGCTGCGTGTGAT...ACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGCTGTGGTTTTTGCAGTaGGCCTCCTGCAGAACACGG +
Preference number: 5 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKLWFLQ*ASCRTR
Trigger: CCGTGTTCTGCAGGAGGCCAACTGCAAAAACCACAG...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp CTCAGCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTAGAGGGCAATCTGTCTaGTGTTCCACCTGGAGACCC +
Preference number: 5 (lower is better)
Translates to: LSFQEDEASSQMESPGEGRGQSV*CSTWRP
Trigger: GGGTCTCCAGGTGGAACACAAGACAGATTGCCCTCT...ACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGACGCCAGGACATCGCTaGTCAGAATCATTCGACCGC +
Preference number: 5 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKTPGHR*SESFDR
Trigger: GCGGTCGAATGATTCTGACAAGCGATGTCCTGGCGT...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540068.6
CDS-3UTR CAA 90 bp AGGGATTGGCATCTTGATGCAGCGGGAAAGGCCCTGGCCTTGGGGTCTGAACACCTTGGAGCTACGGTATaGCGGACGCCAGGACATCGC +
Preference number: 5 (lower is better)
Translates to: RDWHLDAAGKALALGSEHLGATV*RTPGHR
Trigger: GCGATGTCCTGGCGTCCGCAATACCGTAGCTCCAAG...GTGTTCAGACCCCAAGGCCAGGGCCTTTCCCGCTGCATCAAGATGCCAATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540068.6
CDS TCA 90 bp GCTAAGACCATGAAGGCTGTACCCTGCACAGATGGGCCGTGTGGATaGATAGCGCCCAAGGAGTTATGCCACATGGGGGCCACGGGTGCA +
Preference number: 5 (lower is better)
Translates to: AKTMKAVPCTDGPCG*IAPKELCHMGATGA
Trigger: TGCACCCGTGGCCCCCATGTGGCATAACTCCTTGGGCGCTATTCATCCACACGGCCCATCTGTGCAGGGTACAGCCTTCATGGTCTTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543950.3
CDS-3UTR CAA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGACGGCACAGAAGTGGTaGTCGTGCACATTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKTAQKW*SCTFLV
Trigger: CACCAAGAATGTGCACGACAACCACTTCTGTGCCGT...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGCCGTGCCTGGTGTCATaGGGTAAATGTCTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKPCLVS*GKCLPG
Trigger: ACCAGGAAGACATTTACCCAATGACACCAGGCACGG...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GCTTCCAGGAGGACGAGGCCTCATCTCAGATGGAGTCCCCTGGGGAGGGTGGTGGGGGTCATTATGGCCTaGGAGAGCAATCCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: ASRRTRPHLRWSPLGRVVGVIMA*ESNPLN
Trigger: ATTCAGAGGATTGCTCTCCAAGGCCATAATGACCCC...CACCACCCTCCCCAGGGGACTCCATCTGAGATGAGGCCTCGTCCTCCTGGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS GCA 90 bp CACGGGATCTCGGTTGATGCCTCCCAGCCATTCATCCGGGGTCAGTaGTGGCTCCGTGCCTGGTGTCATTGGGTAAATGTCTTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: HGISVDASQPFIRGQ*WLRAWCHWVNVFLV
Trigger: TACCAGGAAGACATTTACCCAATGACACCAGGCACGGAGCCAGCACTGACCCCGGATGAATGGCTGGGAGGCATCAACCGAGATCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS CCA 90 bp GGGATCTCGGTTGATGCCTCCCAGCCATTCATCCGGGGTCAGTGCTaGCTCCGTGCCTGGTGTCATTGGGTAAATGTCTTCCTGGTAGGA +
Preference number: 5 (lower is better)
Translates to: GISVDASQPFIRGQC*LRAWCHWVNVFLVG
Trigger: TCCTACCAGGAAGACATTTACCCAATGACACCAGGCACGGAGCCAGCACTGACCCCGGATGAATGGCTGGGAGGCATCAACCGAGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS CCA 90 bp AGCAGTGCTCCCGGTTGGCCACCTTCCCGTAGACATTCCGGAACTTaGAGCTACGGTATTGCGGACGCCAGGACATCGCTTGTCAGAATC +
Preference number: 5 (lower is better)
Translates to: SSAPGWPPSRRHSGT*SYGIADARTSLVRI
Trigger: GATTCTGACAAGCGATGTCCTGGCGTCCGCAATACCGTAGCTCCAAGTTCCGGAATGTCTACGGGAAGGTGGCCAACCGGGAGCACTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540068.6
CDS-3UTR CAA 90 bp GAGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCTTGTCGTGCACATTCTaGGTGATGGGGATCCCATCG +
Preference number: 5 (lower is better)
Translates to: EVHKGKAQLTWRGLGSPGLSCTF*VMGIPS
Trigger: CGATGGGATCCCCATCACCAAGAATGTGCACGACAA...GCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGCAGTTCTTGGGGCTGTaGCGCAAGTTTTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKQFLGL*RKFFSS
Trigger: GGAACTGAAAAACTTGCGCAACAGCCCCAAGAACTG...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp CGCAGAGCATCCCTAGAAGCCATCAGACCCTGGTCTGCCTTCCCCAGGGCCAAGTGCCTGGCTCACAAATaGAATGGGAAAAGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: RRASLEAIRPWSAFPRAKCLAHK*NGKRVC
Trigger: GCACACCCTTTTCCCATTCAATTTGTGAGCCAGGCA...CTTGGCCCTGGGGAAGGCAGACCAGGGTCTGATGGCTTCTAGGGATGCTCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp CTCCATAGAGACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGCGCGGCCTGGAAGACTaGCACAATGGCCCACGGCAC +
Preference number: 5 (lower is better)
Translates to: LHRDLGTGEAHKGIGILMRGLED*HNGPRH
Trigger: GTGCCGTGGGCCATTGTGCAAGTCTTCCAGGCCGCG...CATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540068.6
CDS GCA 90 bp TCCTTCTGGGCCAGCTCCTCTTTCAACCGTCGAATCTCATCCTGCTaGCGGAAGAACATTCGAAGGAGCTCATTCTCTGTCCTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SFWASSSFNRRISSC*RKNIRRSSFSVLGG
Trigger: CCCACCCAGGACAGAGAATGAGCTCCTTCGAATGTTCTTCCGGCAGCAGGATGAGATTCGACGGTTGAAAGAGGAGCTGGCCCAGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS GCA 90 bp TGGGGCTGTTGCGCAAGTTTTTCAGTTCCAGCTGGAGCTGCCGAATaGGGATGTCCTTCTGGGCCAGCTCCTCTTTCAACCGTCGAATCT +
Preference number: 5 (lower is better)
Translates to: WGCCASFSVPAGAAE*GCPSGPAPLSTVES
Trigger: AGATTCGACGGTTGAAAGAGGAGCTGGCCCAGAAGGACATCCGCATTCGGCAGCTCCAGCTGGAACTGAAAAACTTGCGCAACAGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS GCA 90 bp CAGTTCTTGGGGCTGTTGCGCAAGTTTTTCAGTTCCAGCTGGAGCTaGCGAATGCGGATGTCCTTCTGGGCCAGCTCCTCTTTCAACCGT +
Preference number: 5 (lower is better)
Translates to: QFLGLLRKFFSSSWS*RMRMSFWASSSFNR
Trigger: ACGGTTGAAAGAGGAGCTGGCCCAGAAGGACATCCGCATTCGGCAGCTCCAGCTGGAACTGAAAAACTTGCGCAACAGCCCCAAGAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS CCA 90 bp AAGTTTTTCAGTTCCAGCTGGAGCTGCCGAATGCGGATGTCCTTCTaGGCCAGCTCCTCTTTCAACCGTCGAATCTCATCCTGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: KFFSSSWSCRMRMSF*ASSSFNRRISSCCR
Trigger: CCGGCAGCAGGATGAGATTCGACGGTTGAAAGAGGAGCTGGCCCAGAAGGACATCCGCATTCGGCAGCTCCAGCTGGAACTGAAAAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS-3UTR CAA 90 bp AGGTTCATAAAGGAAAGGCCCAGCTCACCTGGAGGGGCTTGGGTAGCCCTGGCCATGAAGGGGTTCCATTaGATATCCAGCACATTGCCC +
Preference number: 5 (lower is better)
Translates to: RFIKERPSSPGGAWVALAMKGFH*ISSTLP
Trigger: GGGCAATGTGCTGGATATCAAATGGAACCCCTTCAT...GGCCAGGGCTACCCAAGCCCCTCCAGGTGAGCTGGGCCTTTCCTTTATGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGCAGCGGGAAAAAGGGATTGGCATCTaGATGCAGCGGGAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: DLGTGEAHKGIGILMQREKGIGI*MQRERP
Trigger: GGGCCTTTCCCGCTGCATCAAGATGCCAATCCCTTT...TTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GTGGCTGAGATAGCGGTGCTGAGACACACGCAGAGCATCCCTAGAAGCCATCAGATTCTCCATAGAGACTaGGGCACTGGTGAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: VAEIAVLRHTQSIPRSHQILHRD*GTGEAH
Trigger: GTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAAT...CTGATGGCTTCTAGGGATGCTCTGCGTGTGTCTCAGCACCGCTATCTCAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp AGTGGCTTCCAGTTCTCATTCTCCATAGAGACTTGGGCACTGGTGAAGCCCACAAGGCTGCCGTCCGTGTaGAAGGACATGCAGAGGATC +
Preference number: 5 (lower is better)
Translates to: SGFQFSFSIETWALVKPTRLPSV*KDMQRI
Trigger: GATCCTCTGCATGTCCTTCAACACGGACGGCAGCCT...TGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAATGAGAACTGGAAGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GGTCTTGGTCGTGGGCCCATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCCGCAGCTTCTTGTCCTaGCACGTGGTGGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: GLGRGPIVDLLGDFISHFRSFLS*HVVVSR
Trigger: CCTGCTCACCACCACGTGCAAGGACAAGAAGCTGCG...GAAATGACTTATAAAGTCACCCAGCAGGTCAACAATGGGCCCACGACCAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GGGCCACTTCTCTCGGTTTCCTCATCTGCAGAAGGGAGTAGACGTGAGGCTCCATTCACTCTGTGGTTTTaGCAGTTGGCCTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: GPLLSVSSSAEGSRREAPFTLWF*QLASCR
Trigger: TCTGCAGGAGGCCAACTGCAAAAACCACAGAGTGAA...TGGAGCCTCACGTCTACTCCCTTCTGCAGATGAGGAAACCGAGAGAAGTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp CTCCATAGAGACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGATCCCGCTTCCCCTCTaGCTTCCTGGTCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: LHRDLGTGEAHKGIGILMIPLPL*LPGPLR
Trigger: TCTCAGTGGACCAGGAAGCAAGAGGGGAAGCGGGAT...CATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GAGCTTTGTAGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTTGGAGAGCTTGGTCGTGGGCCCATaGTTGACCTGCTGGGTGACT +
Preference number: 5 (lower is better)
Translates to: ELCRESWGRQGVIMALESLVVGP*LTCWVT
Trigger: AGTCACCCAGCAGGTCAACAATGGGCCCACGACCAA...GCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS GCA 90 bp ATGTCCTTCTGGGCCAGCTCCTCTTTCAACCGTCGAATCTCATCCTaGTGCCGGAAGAACATTCGAAGGAGCTCATTCTCTGTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: MSFWASSSFNRRISS*CRKNIRRSSFSVLG
Trigger: ACCCAGGACAGAGAATGAGCTCCTTCGAATGTTCTTCCGGCAGCAGGATGAGATTCGACGGTTGAAAGAGGAGCTGGCCCAGAAGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS-3UTR CAA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCAGGCTGCCGTCCGTGTaGAAGGACATGCAGAGGATC +
Preference number: 5 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSRLPSV*KDMQRI
Trigger: GATCCTCTGCATGTCCTTCAACACGGACGGCAGCCT...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp CTCCATAGAGACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGATCACACGCAGCTTCTaGTCCTTGCACGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LHRDLGTGEAHKGIGILMITRSF*SLHVVV
Trigger: CACCACCACGTGCAAGGACAAGAAGCTGCGTGTGAT...CATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp TACACTGTGGTACCTTCAGTGATGCTGAGAGCTCCAGGCGGGAGTGCTGAGATGTGCCTGGCTCACAAATaGAATGGGAAAAGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: YTVVPSVMLRAPGGSAEMCLAHK*NGKRVC
Trigger: GCACACCCTTTTCCCATTCAATTTGTGAGCCAGGCA...CATCTCAGCACTCCCGCCTGGAGCTCTCAGCATCACTGAAGGTACCACAGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS CCA 90 bp TTGGAGCTACGGTATTGCGGACGCCAGGACATCAGGTGGGGCTCCTaGATGACACCAGACAAGCTTCAGAGGAAACAAACTTGTATCTTC +
Preference number: 5 (lower is better)
Translates to: LELRYCGRQDIRWGS*MTPDKLQRKQTCIF
Trigger: GAAGATACAAGTTTGTTTCCTCTGAAGCTTGTCTGGTGTCATCCAGGAGCCCCACCTGATGTCCTGGCGTCCGCAATACCGTAGCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543950.3
CDS-3UTR CAA 90 bp CTCCATAGAGACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGTTGTCGTGCACATTCTaGGTGATGGGGATCCCATCG +
Preference number: 5 (lower is better)
Translates to: LHRDLGTGEAHKGIGILMLSCTF*VMGIPS
Trigger: CGATGGGATCCCCATCACCAAGAATGTGCACGACAA...CATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GACTTGGGCACTGGTGAAGCCCACAAAGGGATTGGCATCTTGATGCAGCGGGAAATGAAGGGGTTCCATTaGATATCCAGCACATTGCCC +
Preference number: 5 (lower is better)
Translates to: DLGTGEAHKGIGILMQREMKGFH*ISSTLP
Trigger: GGGCAATGTGCTGGATATCAAATGGAACCCCTTCAT...TTCCCGCTGCATCAAGATGCCAATCCCTTTGTGGGCTTCACCAGTGCCCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCAGAGGGCAATCTGTCTaGTGTTCCACCTGGAGACCC +
Preference number: 5 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSRGQSV*CSTWRP
Trigger: GGGTCTCCAGGTGGAACACAAGACAGATTGCCCTCT...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GAGCTTTGTAGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTTGGAGAGCCCGTGCCTGGTGTCATaGGGTAAATGTCTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: ELCRESWGRQGVIMALESPCLVS*GKCLPG
Trigger: ACCAGGAAGACATTTACCCAATGACACCAGGCACGG...GCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCGTCGTGGGCCCATTGTaGACCTGCTGGGTGACTTTA +
Preference number: 5 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSVVGPL*TCWVTL
Trigger: TAAAGTCACCCAGCAGGTCAACAATGGGCCCACGAC...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GAGCTTTGTAGAGAATCATGGGGAAGGCAAGGGGTCATTATGGCCTTGGAGAGCATTCTCCATAGAGACTaGGGCACTGGTGAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: ELCRESWGRQGVIMALESILHRD*GTGEAH
Trigger: GTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAAT...GCTCTCCAAGGCCATAATGACCCCTTGCCTTCCCCATGATTCTCTACAAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS TCA 90 bp AGCTACGGTATTGCGGACGCCAGGACATCAGGTGGGGCTCCTGGATaGCACCAGACAAGCTTCAGAGGAAACAAACTTGTATCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: SYGIADARTSGGAPG*HQTSFRGNKLVSSL
Trigger: CAAAGAAGATACAAGTTTGTTTCCTCTGAAGCTTGTCTGGTGTCATCCAGGAGCCCCACCTGATGTCCTGGCGTCCGCAATACCGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543950.3
CDS-3UTR CAA 90 bp AGTGGCTTCCAGTTCTCATTCTCCATAGAGACTTGGGCACTGGTGAAGCCCACACACGAGGCAATGATGTaGTCGATGAAGGGGTTCCAT +
Preference number: 5 (lower is better)
Translates to: SGFQFSFSIETWALVKPTHEAMM*SMKGFH
Trigger: ATGGAACCCCTTCATCGACAACATCATTGCCTCGTG...TGTGGGCTTCACCAGTGCCCAAGTCTCTATGGAGAATGAGAACTGGAAGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp ATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCCCCATTGCAACCCTCAGTCGCAGCTTCTTGTCCTaGCACGTGGTGGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: IVDLLGDFISHFPIATLSRSFLS*HVVVSR
Trigger: CCTGCTCACCACCACGTGCAAGGACAAGAAGCTGCG...ACTGAGGGTTGCAATGGGGAAATGACTTATAAAGTCACCCAGCAGGTCAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GGTCTTGGTCGTGGGCCCATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCTTCACTCTGTGGTTTTaGCAGTTGGCCTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: GLGRGPIVDLLGDFISHFFTLWF*QLASCR
Trigger: TCTGCAGGAGGCCAACTGCAAAAACCACAGAGTGAA...GAAATGACTTATAAAGTCACCCAGCAGGTCAACAATGGGCCCACGACCAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp ATCTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCACATCCAGCCCGTGCTaGGGCATGACCCCTAGGCCT +
Preference number: 5 (lower is better)
Translates to: ISPQTVTLLRTVFINSLCTSSPC*GMTPRP
Trigger: AGGCCTAGGGGTCATGCCCAAGCACGGGCTGGATGT...GCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCGTGGACACCCATTTCTaGATTTCCAGATCTCACCCC +
Preference number: 5 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSVDTHF*ISRSHP
Trigger: GGGGTGAGATCTGGAAATCAAGAAATGGGTGTCCAC...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp CTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGTCTGTGGTTTTTGCAGTaGGCCTCCTGCAGAACACGG +
Preference number: 5 (lower is better)
Translates to: LTPNCDSSENSVYKLFVRLWFLQ*ASCRTR
Trigger: CCGTGTTCTGCAGGAGGCCAACTGCAAAAACCACAG...ACGCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp TACACTGTGGTACCTTCAGTGATGCTGAGAGCTCCAGGCGGGAGTGCTGAGATGGTGTTTATAAACTCTTaGTGCGTAGTGGGAAATGAA +
Preference number: 5 (lower is better)
Translates to: YTVVPSVMLRAPGGSAEMVFINS*CVVGNE
Trigger: TTCATTTCCCACTACGCACAAAGAGTTTATAAACAC...CATCTCAGCACTCCCGCCTGGAGCTCTCAGCATCACTGAAGGTACCACAGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp ATTGTTGACCTGCTGGGTGACTTTATAAGTCATTTCCCCATTGCAACCCTCAGTCACGAGGCAATGATGTaGTCGATGAAGGGGTTCCAT +
Preference number: 5 (lower is better)
Translates to: IVDLLGDFISHFPIATLSHEAMM*SMKGFH
Trigger: ATGGAACCCCTTCATCGACAACATCATTGCCTCGTG...ACTGAGGGTTGCAATGGGGAAATGACTTATAAAGTCACCCAGCAGGTCAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp ATCTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGTCGTGGGCCCATTGTaGACCTGCTGGGTGACTTTA +
Preference number: 5 (lower is better)
Translates to: ISPQTVTLLRTVFINSLCVVGPL*TCWVTL
Trigger: TAAAGTCACCCAGCAGGTCAACAATGGGCCCACGAC...GCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp ATCTCACCCCAAACTGTGACTCTTCTGAGAACAGTGTTTATAAACTCTTTGTGCGGGGTCATTATGGCCTaGGAGAGCAATCCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: ISPQTVTLLRTVFINSLCGVIMA*ESNPLN
Trigger: ATTCAGAGGATTGCTCTCCAAGGCCATAATGACCCC...GCACAAAGAGTTTATAAACACTGTTCTCAGAAGAGTCACAGTTTGGGGTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS-3UTR CAA 90 bp GGGCGGCCATGGGAAAAGCAGGTATGGAGTATAATGCATCTAGTAGATCCTAGCGTGTTTATAAACTCTTaGTGCGTAGTGGGAAATGAA +
Preference number: 5 (lower is better)
Translates to: GRPWEKQVWSIMHLVDPSVFINS*CVVGNE
Trigger: TTCATTTCCCACTACGCACAAAGAGTTTATAAACAC...GCTAGGATCTACTAGATGCATTATACTCCATACCTGCTTTTCCCATGGCCGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261861.10
ENST00000540068.6
CDS TCA 90 bp CACAACACTCTTCTTTTCTTTGATGGGAGCCTTAAATACCATTTTTaGGGACTTCTTATAGCCTTCTTTCAAAGACATCAGCACGGGATC +
Preference number: 5 (lower is better)
Translates to: HNTLLFFDGSLKYHF*GLLIAFFQRHQHGI
Trigger: GATCCCGTGCTGATGTCTTTGAAAGAAGGCTATAAGAAGTCCTCAAAAATGGTATTTAAGGCTCCCATCAAAGAAAAGAAGAGTGTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS CAA 72 bp CGGAACACCTCGCAGGCTGACACATCCAGCCCGTGCTaGGGCATGACCCCTAGGCCTTTCTGCGGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: RNTSQADTSSPC*GMTPRPFCGAG
Trigger: CCCAGCCCCGCAGAAAGGCCTAGGGGTCATGCCCAAGCACGGGCTGGATGTGTCAGCCTGCGAGGTGTTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS GCA 72 bp AAGCGGAACACCTCGCAGGCTGACACATCCAGCCCGTaGTTGGGCATGACCCCTAGGCCTTTCTGCGGGGCT +
Preference number: 6 (lower is better)
Translates to: KRNTSQADTSSP*LGMTPRPFCGA
Trigger: AGCCCCGCAGAAAGGCCTAGGGGTCATGCCCAAGCACGGGCTGGATGTGTCAGCCTGCGAGGTGTTCCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS TCA 72 bp TGGAGCTACGGTATTGCGGACGCCAGGACATCTTTGTaGCAGTCATGCAGAAACTCCGCGGCGGAGCGGGGG +
Preference number: 6 (lower is better)
Translates to: WSYGIADARTSL*QSCRNSAAERG
Trigger: CCCCCGCTCCGCCGCGGAGTTTCTGCATGACTGTCACAAAGATGTCCTGGCGTCCGCAATACCGTAGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261861.10
CDS CAA 72 bp CGCTTGTCAGAATCATTCGACCGCGGCCTGGAAGACTaGCACAATGGCCCACGGCACCCAGCAGGCGGTTTG +
Preference number: 6 (lower is better)
Translates to: RLSESFDRGLED*HNGPRHPAGGL
Trigger: CAAACCGCCTGCTGGGTGCCGTGGGCCATTGTGCAAGTCTTCCAGGCCGCGGTCGAATGATTCTGACAAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540068.6
CDS CCA 72 bp CAGGACATCGCTTGTCAGAATCATTCGACCGCGGCCTaGAAGACTTGCACAATGGCCCACGGCACCCAGCAG +
Preference number: 6 (lower is better)
Translates to: QDIACQNHSTAA*KTCTMAHGTQQ
Trigger: CTGCTGGGTGCCGTGGGCCATTGTGCAAGTCTTCCAGGCCGCGGTCGAATGATTCTGACAAGCGATGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540068.6
CDS CCA 72 bp CCCGGTTGGCCACCTTCCCGTAGACATTCCGGAACTTaGAGCTACGGTATTGCGGACGCCAGGACATCGCTT +
Preference number: 6 (lower is better)
Translates to: PGWPPSRRHSGT*SYGIADARTSL
Trigger: AAGCGATGTCCTGGCGTCCGCAATACCGTAGCTCCAAGTTCCGGAATGTCTACGGGAAGGTGGCCAACCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540068.6
CDS CCA 72 bp CCCGGTTGGCCACCTTCCCGTAGACATTCCGGAACTTaGAGCTACGGTATTGCGGACGCCAGGACATCAGGT +
Preference number: 6 (lower is better)
Translates to: PGWPPSRRHSGT*SYGIADARTSG
Trigger: ACCTGATGTCCTGGCGTCCGCAATACCGTAGCTCCAAGTTCCGGAATGTCTACGGGAAGGTGGCCAACCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543950.3
CDS TCA 72 bp ATGAAGGCTGTACCCTGCACAGATGGGCCGTGTGGATaGATAGCGCCCAAGGAGTTATGCCACATGGGGGCC +
Preference number: 6 (lower is better)
Translates to: MKAVPCTDGPCG*IAPKELCHMGA
Trigger: GGCCCCCATGTGGCATAACTCCTTGGGCGCTATTCATCCACACGGCCCATCTGTGCAGGGTACAGCCTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543950.3
CDS GCA 72 bp CTCCCAGCCATTCATCCGGGGTCAGTGCTGGCTCCGTaGCTGGTGTCATTGGGTAAATGTCTTCCTGGTAGG +
Preference number: 6 (lower is better)
Translates to: LPAIHPGSVLAP*LVSLGKCLPGR
Trigger: CCTACCAGGAAGACATTTACCCAATGACACCAGGCACGGAGCCAGCACTGACCCCGGATGAATGGCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS GCA 72 bp TCGGTTGATGCCTCCCAGCCATTCATCCGGGGTCAGTaGTGGCTCCGTGCCTGGTGTCATTGGGTAAATGTC +
Preference number: 6 (lower is better)
Translates to: SVDASQPFIRGQ*WLRAWCHWVNV
Trigger: GACATTTACCCAATGACACCAGGCACGGAGCCAGCACTGACCCCGGATGAATGGCTGGGAGGCATCAACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS GCA 72 bp GGGCTGTTGCGCAAGTTTTTCAGTTCCAGCTGGAGCTaGCGAATGCGGATGTCCTTCTGGGCCAGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: GLLRKFFSSSWS*RMRMSFWASSS
Trigger: AGAGGAGCTGGCCCAGAAGGACATCCGCATTCGGCAGCTCCAGCTGGAACTGAAAAACTTGCGCAACAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS CCA 72 bp CCCGGTTGGCCACCTTCCCGTAGACATTCCGGAACTTaGAGCTACGGTATTGCGGACGCCAGGACATCTTTG +
Preference number: 6 (lower is better)
Translates to: PGWPPSRRHSGT*SYGIADARTSL
Trigger: CAAAGATGTCCTGGCGTCCGCAATACCGTAGCTCCAAGTTCCGGAATGTCTACGGGAAGGTGGCCAACCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261861.10
CDS CCA 72 bp AGTTCCAGCTGGAGCTGCCGAATGCGGATGTCCTTCTaGGCCAGCTCCTCTTTCAACCGTCGAATCTCATCC +
Preference number: 6 (lower is better)
Translates to: SSSWSCRMRMSF*ASSSFNRRISS
Trigger: GGATGAGATTCGACGGTTGAAAGAGGAGCTGGCCCAGAAGGACATCCGCATTCGGCAGCTCCAGCTGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS CCA 72 bp GACCATGAAGGCTGTACCCTGCACAGATGGGCCGTGTaGATGAATAGCGCCCAAGGAGTTATGCCACATGGG +
Preference number: 6 (lower is better)
Translates to: DHEGCTLHRWAV*MNSAQGVMPHG
Trigger: CCCATGTGGCATAACTCCTTGGGCGCTATTCATCCACACGGCCCATCTGTGCAGGGTACAGCCTTCATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543950.3
CDS CAA 72 bp CATCCGGGGTCAGTGCTGGCTCCGTGCCTGGTGTCATaGGGTAAATGTCTTCCTGGTAGGAATCTGACCTCC +
Preference number: 6 (lower is better)
Translates to: HPGSVLAPCLVS*GKCLPGRNLTS
Trigger: GGAGGTCAGATTCCTACCAGGAAGACATTTACCCAATGACACCAGGCACGGAGCCAGCACTGACCCCGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS CAA 90 bp TCCCAGATCCGCACCGACGTGTCCTCCGAGCACGAGGCAATGATGTaGTCGATGAAGGGGTTCCATTTGATATCCAGCACATTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: SQIRTDVSSEHEAMM*SMKGFHLISSTLPW
Trigger: CCAGGGCAATGTGCTGGATATCAAATGGAACCCCTTCATCGACAACATCATTGCCTCGTGCTCGGAGGACACGTCGGTGCGGATCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS GCA 72 bp TGCGCAAGTTTTTCAGTTCCAGCTGGAGCTGCCGAATaGGGATGTCCTTCTGGGCCAGCTCCTCTTTCAACC +
Preference number: 6 (lower is better)
Translates to: CASFSVPAGAAE*GCPSGPAPLST
Trigger: GGTTGAAAGAGGAGCTGGCCCAGAAGGACATCCGCATTCGGCAGCTCCAGCTGGAACTGAAAAACTTGCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS GCA 72 bp CAGGAGGCACTCACATCACCATCCCAGAGACCCCGCTaGAGCAGTCAAGATAACGGGAATCTGACTACCTTC +
Preference number: 6 (lower is better)
Translates to: QEALTSPSQRPR*SSQDNGNLTTF
Trigger: GAAGGTAGTCAGATTCCCGTTATCTTGACTGCTGCAGCGGGGTCTCTGGGATGGTGATGTGAGTGCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543950.3
CDS CCA 72 bp TTCATGTTCCCCAGGAACACCACCCGGTTCACTCTGTaGTTTTTGCAGTTGGCCTCCTGCAGAACACGGCCA +
Preference number: 6 (lower is better)
Translates to: FMFPRNTTRFTL*FLQLASCRTRP
Trigger: TGGCCGTGTTCTGCAGGAGGCCAACTGCAAAAACCACAGAGTGAACCGGGTGGTGTTCCTGGGGAACATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS CCA 72 bp CGGTATTGCGGACGCCAGGACATCAGGTGGGGCTCCTaGATGACACCAGACAAGCTTCAGAGGAAACAAACT +
Preference number: 6 (lower is better)
Translates to: RYCGRQDIRWGS*MTPDKLQRKQT
Trigger: AGTTTGTTTCCTCTGAAGCTTGTCTGGTGTCATCCAGGAGCCCCACCTGATGTCCTGGCGTCCGCAATACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543950.3
CDS CCA 72 bp AAACGACGGAGAGATCGGCTTAGAAAACAGCCCAGCTaGGGAGCTAACAGTTCTTGGGGCTGTTGCGCAAGT +
Preference number: 6 (lower is better)
Translates to: KRRRDRLRKQPS*GANSSWGCCAS
Trigger: ACTTGCGCAACAGCCCCAAGAACTGTTAGCTCCCCAGCTGGGCTGTTTTCTAAGCCGATCTCTCCGTCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS CAA 72 bp CACGAGGCAATGATGTTGTCGATGAAGGGGTTCCATTaGATATCCAGCACATTGCCCTGGTGGCCGCAGACC +
Preference number: 6 (lower is better)
Translates to: HEAMMLSMKGFH*ISSTLPWWPQT
Trigger: GGTCTGCGGCCACCAGGGCAATGTGCTGGATATCAAATGGAACCCCTTCATCGACAACATCATTGCCTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS CAA 72 bp CGCACCGACGTGTCCTCCGAGCACGAGGCAATGATGTaGTCGATGAAGGGGTTCCATTTGATATCCAGCACA +
Preference number: 6 (lower is better)
Translates to: RTDVSSEHEAMM*SMKGFHLISST
Trigger: TGTGCTGGATATCAAATGGAACCCCTTCATCGACAACATCATTGCCTCGTGCTCGGAGGACACGTCGGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS TCA 72 bp ATTGCGGACGCCAGGACATCAGGTGGGGCTCCTGGATaGCACCAGACAAGCTTCAGAGGAAACAAACTTGTA +
Preference number: 6 (lower is better)
Translates to: IADARTSGGAPG*HQTSFRGNKLV
Trigger: TACAAGTTTGTTTCCTCTGAAGCTTGTCTGGTGTCATCCAGGAGCCCCACCTGATGTCCTGGCGTCCGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543950.3
CDS GCA 72 bp GCCAGCTCCTCTTTCAACCGTCGAATCTCATCCTGCTaGCGGAAGAACATTCGAAGGAGCTCATTCTCTGTC +
Preference number: 6 (lower is better)
Translates to: ASSSFNRRISSC*RKNIRRSSFSV
Trigger: GACAGAGAATGAGCTCCTTCGAATGTTCTTCCGGCAGCAGGATGAGATTCGACGGTTGAAAGAGGAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS GCA 72 bp TGGGCCAGCTCCTCTTTCAACCGTCGAATCTCATCCTaGTGCCGGAAGAACATTCGAAGGAGCTCATTCTCT +
Preference number: 6 (lower is better)
Translates to: WASSSFNRRISS*CRKNIRRSSFS
Trigger: AGAGAATGAGCTCCTTCGAATGTTCTTCCGGCAGCAGGATGAGATTCGACGGTTGAAAGAGGAGCTGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261861.10
ENST00000540068.6
ENST00000543950.3
CDS CAA 90 bp GTGGGGCTCCTGGATGACACCAGACAAGCTTCAGAGGAAACAAACTaGTATCTTCTTTGCACATCCAAGTTGTCAGGGCTGCCAGCTAAG +
Preference number: 6 (lower is better)
Translates to: VGLLDDTRQASEETN*YLLCTSKLSGLPAK
Trigger: CTTAGCTGGCAGCCCTGACAACTTGGATGTGCAAAGAAGATACAAGTTTGTTTCCTCTGAAGCTTGTCTGGTGTCATCCAGGAGCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543950.3
CDS GCA 72 bp AGACAAGCTTCAGAGGAAACAAACTTGTATCTTCTTTaGACATCCAAGTTGTCAGGGCTGCCAGCTAAGACC +
Preference number: 6 (lower is better)
Translates to: RQASEETNLYLL*TSKLSGLPAKT
Trigger: GGTCTTAGCTGGCAGCCCTGACAACTTGGATGTGCAAAGAAGATACAAGTTTGTTTCCTCTGAAGCTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543950.3