RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CORO2A (Homo sapiens)

Ensembl gene IDs: ENSG00000106789

Ensembl transcript IDs: ENST00000343933.9, ENST00000375077.5

Found 526 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCTaGCCAAGGAATGGCATTGTGCAGAGGCATACCGGGAAGCTCTCT +
Preference number: 1 (lower is better)
Translates to: LFVKCAVWVPWGGGS*PRNGIVQRHTGKLS
Trigger: AGAGAGCTTCCCGGTATGCCTCTGCACAATGCCATTCCTTGGCCAGCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 90 bp CCTGAGGGCCTTGGTGGTGGCAGTCAGCAGTCATGGGCACAGTTCTaGAGTCTGCGTCCCTCCATAAGGGACAGCATCTATCCATATCAG +
Preference number: 1 (lower is better)
Translates to: PEGLGGGSQQSWAQF*SLRPSIRDSIYPYQ
Trigger: CTGATATGGATAGATGCTGTCCCTTATGGAGGGACGCAGACTTCAGAACTGTGCCCATGACTGCTGACTGCCACCACCAAGGCCCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 90 bp CCTGAGTCAACAGAAAGGGGACGCCCAGGGTATGGAATAAGGAGATaGGAGCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGC +
Preference number: 1 (lower is better)
Translates to: PESTERGRPGYGIRR*EHALPTGWDLNVLG
Trigger: GCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGCTCTCATCTCCTTATTCCATACCCTGGGCGTCCCCTTTCTGTTGACTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 90 bp GAGGGCAGGACTTGCAAGAGGTCACTGAGTAAGCTGGGGCACAGCTaGGGCCAGAAGCAACAGATTTCTACTCTTTGGGCTGAGAACTGC +
Preference number: 1 (lower is better)
Translates to: EGRTCKRSLSKLGHS*GQKQQISTLWAENC
Trigger: GCAGTTCTCAGCCCAAAGAGTAGAAATCTGTTGCTTCTGGCCTCAGCTGTGCCCCAGCTTACTCAGTGACCTCTTGCAAGTCCTGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CCA 90 bp AAAGACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTaGGGTGGAGGGAGCTGGCCAAGGAATGGCATTGTGCAGAGGCAT +
Preference number: 1 (lower is better)
Translates to: KDTCVLFVKCAVWVP*GGGSWPRNGIVQRH
Trigger: ATGCCTCTGCACAATGCCATTCCTTGGCCAGCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR GCA 90 bp AACAGAAAGGGGACGCCCAGGGTATGGAATAAGGAGATGAGAGCATaGTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCA +
Preference number: 1 (lower is better)
Translates to: NRKGTPRVWNKEMRA*SANWLGPECARQVP
Trigger: TGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGCTCTCATCTCCTTATTCCATACCCTGGGCGTCCCCTTTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CCA 90 bp ACGCCCAGGGTATGGAATAAGGAGATGAGAGCATGCTCTGCCAACTaGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATCAGCTC +
Preference number: 1 (lower is better)
Translates to: TPRVWNKEMRACSAN*LGPECARQVPLHQL
Trigger: GAGCTGATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGCTCTCATCTCCTTATTCCATACCCTGGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 90 bp GAGGCTAGGTCTTTGATTCTGAACATGGGGACTGTAATGCCTGCCTaGCCTGTGTTAGAACAGCATGTGTCACTGAGTGGAGGTGGGAGG +
Preference number: 1 (lower is better)
Translates to: EARSLILNMGTVMPA*PVLEQHVSLSGGGR
Trigger: CCTCCCACCTCCACTCAGTGACACATGCTGTTCTAACACAGGTCAGGCAGGCATTACAGTCCCCATGTTCAGAATCAAAGACCTAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CCA 90 bp GGAATTCTAATGTACACAGCTTGGGTTGAAACCTACCAGACTAGGTaGCCTCCTGCAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCT +
Preference number: 1 (lower is better)
Translates to: GILMYTAWVETYQTR*PPAVPTSAPESNRP
Trigger: AGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTGCAGGAGGCCACCTAGTCTGGTAGGTTTCAACCCAAGCTGTGTACATTAGAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CCA 90 bp AGTTTGTTCAAAGACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTaGGTCCCTTGGGGTGGAGGGAGCTGGCCAAGGAATGGCATTGTG +
Preference number: 1 (lower is better)
Translates to: SLFKDTCVLFVKCAV*VPWGGGSWPRNGIV
Trigger: CACAATGCCATTCCTTGGCCAGCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTCTTTGAACAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 90 bp ATGAAGAAACTGAGACCAGAGAGGGCAGGACTTGCAAGAGGTCACTaGGTAAGCTGGGGCACAGCTGAGGCCAGAAGCAACAGATTTCTA +
Preference number: 1 (lower is better)
Translates to: MKKLRPERAGLARGH*VSWGTAEARSNRFL
Trigger: TAGAAATCTGTTGCTTCTGGCCTCAGCTGTGCCCCAGCTTACTCAGTGACCTCTTGCAAGTCCTGCCCTCTCTGGTCTCAGTTTCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 90 bp ACTAAGGCAATCTTGGCTAGTGCATCAGACGGGAGTGAGCCCCAGTaGCTGAGTAAATGGAGAATAAGACAAGGAACACGAGCATCCGGC +
Preference number: 1 (lower is better)
Translates to: TKAILASASDGSEPQ*LSKWRIRQGTRASG
Trigger: GCCGGATGCTCGTGTTCCTTGTCTTATTCTCCATTTACTCAGTCACTGGGGCTCACTCCCGTCTGATGCACTAGCCAAGATTGCCTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CCA 90 bp CTGCAGATCACCTGTGGAGCTTATATGACCATACAGGCCCTACTCTaGAGATTCAGCTTCAGTTGGTCTGGAATGTGGCATGGGCATCTG +
Preference number: 1 (lower is better)
Translates to: LQITCGAYMTIQALL*RFSFSWSGMWHGHL
Trigger: CAGATGCCCATGCCACATTCCAGACCAACTGAAGCTGAATCTCCAGAGTAGGGCCTGTATGGTCATATAAGCTCCACAGGTGATCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 90 bp GCCAAAGCTCATCTCCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTaGGTCAACAGAAAGGGGACGCCCAGGGTATGGAATAAGGAGATG +
Preference number: 1 (lower is better)
Translates to: AKAHLLVLSSFSESS*VNRKGTPRVWNKEM
Trigger: CATCTCCTTATTCCATACCCTGGGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGGAGATGAGCTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 90 bp AAGTCTGCGTCCCTCCATAAGGGACAGCATCTATCCATATCAGGCTaGTTCTGGTTGGAAAGGTTGGTTTTGACCACCTGCCTGTGTTGT +
Preference number: 1 (lower is better)
Translates to: KSASLHKGQHLSISG*FWLERLVLTTCLCC
Trigger: ACAACACAGGCAGGTGGTCAAAACCAACCTTTCCAACCAGAATCAGCCTGATATGGATAGATGCTGTCCCTTATGGAGGGACGCAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR GCA 90 bp AGAGCAAAAAGACAGACCCAGAAAAGCAGGATCTCAGCCCAGCCCTaGCATGAAACAAATATCACTTGCCTCTCTCTAGGCCTTAGTTTC +
Preference number: 1 (lower is better)
Translates to: RAKRQTQKSRISAQP*HETNITCLSLGLSF
Trigger: GAAACTAAGGCCTAGAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTTTCTGGGTCTGTCTTTTTGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR GCA 90 bp CTGAGTAAATGGAGAATAAGACAAGGAACACGAGCATCCGGCCTGTaGAGACATACAAGCAGAATAAACCACAGCTGGGTAAGGGGCAAA +
Preference number: 1 (lower is better)
Translates to: LSKWRIRQGTRASGL*RHTSRINHSWVRGK
Trigger: TTTGCCCCTTACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTTCCTTGTCTTATTCTCCATTTACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CCA 90 bp GGTACACATGCAGTCTTCCATCTTCACTGTACTGCAGATCACCTGTaGAGCTTATATGACCATACAGGCCCTACTCTGGAGATTCAGCTT +
Preference number: 1 (lower is better)
Translates to: GTHAVFHLHCTADHL*SLYDHTGPTLEIQL
Trigger: AAGCTGAATCTCCAGAGTAGGGCCTGTATGGTCATATAAGCTCCACAGGTGATCTGCAGTACAGTGAAGATGGAAGACTGCATGTGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR GCA 90 bp CTGGAGCTTGCTGTCCTCTTCATCTTTATTGCAAATAGGTACACATaGAGTCTTCCATCTTCACTGTACTGCAGATCACCTGTGGAGCTT +
Preference number: 1 (lower is better)
Translates to: LELAVLFIFIANRYT*SLPSSLYCRSPVEL
Trigger: AAGCTCCACAGGTGATCTGCAGTACAGTGAAGATGGAAGACTGCATGTGTACCTATTTGCAATAAAGATGAAGAGGACAGCAAGCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCCTGGCATGTCTCCAGTaGTGGGGGCCCCCTACCTCC +
Preference number: 2 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSLACLQ*WGPPTS
Trigger: GGAGGTAGGGGGCCCCCATCACTGGAGACATGCCAG...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CAA 90 bp CCCATCGTGCTGCAGCTGCGGTTCCCAGAGATGTTGAGGGAGGGCTaGGGGCAACACTTCTGGACTTTTAAGGAGCCACCAGGCAGGACT +
Preference number: 2 (lower is better)
Translates to: PIVLQLRFPEMLREG*GQHFWTFKEPPGRT
Trigger: AGTCCTGCCTGGTGGCTCCTTAAAAGTCCAGAAGTGTTGCCCCAAGCCCTCCCTCAACATCTCTGGGAACCGCAGCTGCAGCACGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGGGCCAGAGGCTCTGCTaGCATGTCTCCAGTGATGGG +
Preference number: 2 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGGQRLC*HVSSDG
Trigger: CCCATCACTGGAGACATGCCAGCAGAGCCTCTGGCC...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGCTGCCCACATCATCCTaGAGGAGGCAGGCTGTGTAC +
Preference number: 2 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGLPTSS*RRQAVY
Trigger: GTACACAGCCTGCCTCCTGCAGGATGATGTGGGCAG...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGAGCCTCCCAAGTCGCTaGAATTACAGGCGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWSLPSR*NYRRLP
Trigger: TGGCAGGCGCCTGTAATTCCAGCGACTTGGGAGGCT...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGCTGGTCTTGAACTCCTaGCCTCAGAAGATCCGCCCA +
Preference number: 2 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGLVLNS*PQKIRP
Trigger: TGGGCGGATCTTCTGAGGTCAGGAGTTCAAGACCAG...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGTGGCCAGGCTGGTCTTaGACTCCTGACCTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGWPGWS*TPDLRR
Trigger: TCTTCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCA...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCGGCAAACAGGGGCACTaGACCCCCATCGTGCTGCAG +
Preference number: 2 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAGKQGH*TPIVLQ
Trigger: CTGCAGCACGATGGGGGTTCAGTGCCCCTGTTTGCC...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATGAACCCCCATCGTGCTaGAGCTGCGGTTCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: ACSANWLGPECARQVPLHEPPSC*SCGSQR
Trigger: TCTCTGGGAACCGCAGCTGCAGCACGATGGGGGTTC...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGATGAGCCACTGCGTCTaGCCCAGTCTTCCCCTATTC +
Preference number: 2 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGMSHCV*PSLPLF
Trigger: GAATAGGGGAAGACTGGGCCAGACGCAGTGGCTCAT...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATACCTACCAGACTAGGTaGCCTCCTGCAGTCCCCACC +
Preference number: 2 (lower is better)
Translates to: ACSANWLGPECARQVPLHTYQTR*PPAVPT
Trigger: GGTGGGGACTGCAGGAGGCCACCTAGTCTGGTAGGT...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATAGCCACTGCGCCTGGTaGGACTGGTTTCAAACTCCC +
Preference number: 2 (lower is better)
Translates to: ACSANWLGPECARQVPLHSHCAW*DWFQTP
Trigger: GGGAGTTTGAAACCAGTCTCACCAGGCGCAGTGGCT...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGTTCAAGCAATTCTCCTaGCTCAGCCTCCCAAGTCGC +
Preference number: 2 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWFKQFS*LSLPSR
Trigger: GCGACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAA...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGGGTCAAGGTTTCAGGTaGCAGATCCTGCAGAGAGCA +
Preference number: 2 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGGQGFR*QILQRA
Trigger: TGCTCTCTGCAGGATCTGCCACCTGAAACCTTGACC...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCAGCCACTGCGCCTGGTaGGACTGGTTTCAAACTCCC +
Preference number: 2 (lower is better)
Translates to: PSAVLILRKFLSQQKGDASHCAW*DWFQTP
Trigger: GGGAGTTTGAAACCAGTCTCACCAGGCGCAGTGGCT...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATTGGCCAGGCTGGTCTTaGACTCCTGACCTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: ACSANWLGPECARQVPLHWPGWS*TPDLRR
Trigger: TCTTCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCA...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATAAGCTGGGGCACAGCTaGGGCCAGAAGCAACAGATT +
Preference number: 2 (lower is better)
Translates to: ACSANWLGPECARQVPLHKLGHS*GQKQQI
Trigger: AATCTGTTGCTTCTGGCCTCAGCTGTGCCCCAGCTT...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCCCTGTGGAGCTTATATaGCCATACAGGCCCTACTCT +
Preference number: 2 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSPVELI*PYRPYS
Trigger: AGAGTAGGGCCTGTATGGTCATATAAGCTCCACAGG...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATGGAATTACAGGCGCCTaGCACCACGCCCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: ACSANWLGPECARQVPLHGITGA*HHAQLI
Trigger: AATTAGCTGGGCGTGGTGGCAGGCGCCTGTAATTCC...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGTTGCCCAGGTTAGAGTaGAGTGGCACAATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGLPRLE*SGTISA
Trigger: AGCTGAGATTGTGCCACTGCACTCTAACCTGGGCAA...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGAGAGGGCAGGACTTaGAAGAGGTCACTGAGTAAG +
Preference number: 2 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGREGRT*KRSLSK
Trigger: CTTACTCAGTGACCTCTTGCAAGTCCTGCCCTCTCT...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCGAACCCCCATCGTGCTaGAGCTGCGGTTCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLAEPPSC*SCGSQR
Trigger: TCTCTGGGAACCGCAGCTGCAGCACGATGGGGGTTC...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATCCTGTAGAGCTCTGCTaGCCTGACAATGCCTGGGAT +
Preference number: 2 (lower is better)
Translates to: ACSANWLGPECARQVPLHPVELC*PDNAWD
Trigger: ATCCCAGGCATTGTCAGGGCAGCAGAGCTCTACAGG...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCGCTCTGCCAACTGGCTaGGACCTGAATGTGCTAGGC +
Preference number: 2 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAALPTG*DLNVLG
Trigger: GCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGC...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAATAGTGGTTGTCCTTaGGGGGACTTGTGGTTTGGT +
Preference number: 2 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGNSGCP*GDLWFG
Trigger: ACCAAACCACAAGTCCCCTCAAGGACAACCACTATT...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCTGGAAAGGTTGGTTTTaGCCACCTGCCTGTGTTGTA +
Preference number: 2 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSWKGWF*PPACVV
Trigger: TACAACACAGGCAGGTGGTCAAAACCAACCTTTCCA...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATTTCAAGCAATTCTCCTaGCTCAGCCTCCCAAGTCGC +
Preference number: 2 (lower is better)
Translates to: ACSANWLGPECARQVPLHFKQFS*LSLPSR
Trigger: GCGACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAA...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTATGATCTTGGTTCACTaGAACCTCCGCCTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGMILVH*NLRLPG
Trigger: GCCTGGGAGGCGGAGGTTGCAGTGAACCAAGATCAT...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCATGATCTTGGTTCACTaGAACCTCCGCCTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFMILVH*NLRLPG
Trigger: GCCTGGGAGGCGGAGGTTGCAGTGAACCAAGATCAT...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATGGTTGGAATACAGTGTaGGGAAGGGAGACACAGCCT +
Preference number: 2 (lower is better)
Translates to: ACSANWLGPECARQVPLHGWNTV*GRETQP
Trigger: AGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACC...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGAGGGAGCTGTCTGGTTaGAATACAGTGTGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLRELSG*NTVWGR
Trigger: CCTTCCCCACACTGTATTCCAACCAGACAGCTCCCT...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCACACTAAGGCAATCTTaGCTAGTGCATCAGACGGGA +
Preference number: 2 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSTLRQS*LVHQTG
Trigger: TCCCGTCTGATGCACTAGCCAAGATTGCCTTAGTGT...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCACAATGCCTGGGATTTaGCCTTCTTTTCTGGAGCAC +
Preference number: 2 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSTMPGI*PSFLEH
Trigger: GTGCTCCAGAAAAGAAGGCCAAATCCCAGGCATTGT...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGGCATGTGTCACTGAGTaGAGGTGGGAGGAATTTGTA +
Preference number: 2 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGACVTE*RWEEFV
Trigger: TACAAATTCCTCCCACCTCCACTCAGTGACACATGC...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATGAGCTGGCCAAGGAATaGCATTGTGCAGAGGCATAC +
Preference number: 2 (lower is better)
Translates to: ACSANWLGPECARQVPLHELAKE*HCAEAY
Trigger: GTATGCCTCTGCACAATGCCATTCCTTGGCCAGCTC...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CAA 90 bp ACCACCTGCCTGTGTTGTAGAATTGGGTTGAATGCCTCTGACCCCTaGCCAGTGTCCGTTAGTTTCTGTAGCAAACCCAGATCACCCCAC +
Preference number: 2 (lower is better)
Translates to: TTCLCCRIGLNASDP*PVSVSFCSKPRSPH
Trigger: GTGGGGTGATCTGGGTTTGCTACAGAAACTAACGGACACTGGCAAGGGGTCAGAGGCATTCAACCCAATTCTACAACACAGGCAGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGCTCTGGACCACAGTTTaGAAATCACAGACAGGTCAA +
Preference number: 2 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWLWTTV*KSQTGQ
Trigger: TTGACCTGTCTGTGATTTTCAAACTGTGGTCCAGAG...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCCTGGTCTTGAACTCCTaGCCTCAGAAGATCCGCCCA +
Preference number: 2 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLALVLNS*PQKIRP
Trigger: TGGGCGGATCTTCTGAGGTCAGGAGTTCAAGACCAG...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGTCCCCAGCTGTAAAATaGGGAACTTGGGTCAAATCA +
Preference number: 2 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGSPAVK*GTWVKS
Trigger: TGATTTGACCCAAGTTCCTCATTTTACAGCTGGGGA...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGCTATCCATATCAGGCTaGTTCTGGTTGGAAAGGTTG +
Preference number: 2 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGLSISG*FWLERL
Trigger: CAACCTTTCCAACCAGAATCAGCCTGATATGGATAG...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTTCATGGGCACAGTTCTaGAGTCTGCGTCCCTCCATA +
Preference number: 2 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGSWAQF*SLRPSI
Trigger: TATGGAGGGACGCAGACTTCAGAACTGTGCCCATGA...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGATCTCAGCCCAGCCCTaGCATGAAACAAATATCACT +
Preference number: 2 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWISAQP*HETNIT
Trigger: AGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGAT...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGATGCCTCTGACCCCTTaGCAGTGTCCGTTAGTTTCT +
Preference number: 2 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLMPLTP*QCPLVS
Trigger: AGAAACTAACGGACACTGGCAAGGGGTCAGAGGCAT...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATGGGGTTTCACCATGTTaGCCAGGCTGGTTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: ACSANWLGPECARQVPLHGVSPC*PGWFLS
Trigger: AGAAAGAAACCAGCCTGGCCAACATGGTGAAACCCC...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTGGTTGGAATACAGTGTaGGGAAGGGAGACACAGCCT +
Preference number: 2 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGGWNTV*GRETQP
Trigger: AGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACC...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCGGTCAAGGTTTCAGGTaGCAGATCCTGCAGAGAGCA +
Preference number: 2 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAGQGFR*QILQRA
Trigger: TGCTCTCTGCAGGATCTGCCACCTGAAACCTTGACC...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGGGCCAGAGGCTCTGCTaGCATGTCTCCAGTGATGGG +
Preference number: 2 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWGQRLC*HVSSDG
Trigger: CCCATCACTGGAGACATGCCAGCAGAGCCTCTGGCC...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTAATCGCCCTGTGCAATaGAGATCATCTGCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGNRPVQ*RSSAPP
Trigger: AGGAGGGGCAGATGATCTCCATTGCACAGGGCGATT...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGGTCACTGAGTGGAGGTaGGAGGAATTTGTAAACTGT +
Preference number: 2 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGVTEWR*EEFVNC
Trigger: ACAGTTTACAAATTCCTCCCACCTCCACTCAGTGAC...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CAA 90 bp TCTCTTAGGTCAAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTaGTTCCAGGGTACCCCTGGTTCAGATGAAGAAACTGAGACCAGA +
Preference number: 2 (lower is better)
Translates to: SLRSRFQVADPAESS*FQGTPGSDEETETR
Trigger: TCTGGTCTCAGTTTCTTCATCTGAACCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTTGACCTAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGTGGGTTGAATGCCTCTaGCCCCTTGCCAGTGTCCGT +
Preference number: 2 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWWVECL*PLASVR
Trigger: ACGGACACTGGCAAGGGGTCAGAGGCATTCAACCCA...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCAACAGCATGTGTCACTaGGTGGAGGTGGGAGGAATT +
Preference number: 2 (lower is better)
Translates to: PSAVLILRKFLSQQKGDANSMCH*VEVGGI
Trigger: AATTCCTCCCACCTCCACTCAGTGACACATGCTGTT...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATCTTTGGGCTGAGAACTaGATCAGACCCAAAAGAGCA +
Preference number: 2 (lower is better)
Translates to: ACSANWLGPECARQVPLHLWAEN*IRPKRA
Trigger: TGCTCTTTTGGGTCTGATGCAGTTCTCAGCCCAAAG...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCACTAGGGCTGAAATCTaGCCACATCATCCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: PSAVLILRKFLSQQKGDATRAEI*PHHPAG
Trigger: TCCTGCAGGATGATGTGGGCAGATTTCAGCCCTAGT...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCGGCACCATGTCCCACTaGAATCTCTTTCAGCGATGG +
Preference number: 2 (lower is better)
Translates to: KAGSQPSPAMKQISLASLGTMSH*NLFQRW
Trigger: CCATCGCTGAAAGAGATTCCAGTGGGACATGGTGCC...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCGGGGTTTCACCATGTTaGCCAGGCTGGTTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFGVSPC*PGWFLS
Trigger: AGAAAGAAACCAGCCTGGCCAACATGGTGAAACCCC...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGCAGATTTCTACTCTTTaGGCTGAGAACTGCATCAGA +
Preference number: 2 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWQISTL*AENCIR
Trigger: TCTGATGCAGTTCTCAGCCCAAAGAGTAGAAATCTG...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCCAGCTTCAGTTGGTCTaGAATGTGGCATGGGCATCT +
Preference number: 2 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAQLQLV*NVAWAS
Trigger: AGATGCCCATGCCACATTCCAGACCAACTGAAGCTG...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATAGATTCAGCTTCAGTTaGTCTGGAATGTGGCATGGG +
Preference number: 2 (lower is better)
Translates to: ACSANWLGPECARQVPLHRFSFS*SGMWHG
Trigger: CCCATGCCACATTCCAGACCAACTGAAGCTGAATCT...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CAA 90 bp AGCTTATATGACCATACAGGCCCTACTCTGGAGATTCAGCTTCAGTaGGTCTGGAATGTGGCATGGGCATCTGTATTTCCTGCACGCTCC +
Preference number: 2 (lower is better)
Translates to: SLYDHTGPTLEIQLQ*VWNVAWASVFPARS
Trigger: GGAGCGTGCAGGAAATACAGATGCCCATGCCACATTCCAGACCAACTGAAGCTGAATCTCCAGAGTAGGGCCTGTATGGTCATATAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTTTCTACTCTTTGGGCTaGGAACTGCATCAGACCCAA +
Preference number: 2 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGFYSLG*ELHQTQ
Trigger: TTGGGTCTGATGCAGTTCTCAGCCCAAAGAGTAGAA...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGGGAATTACAGGCGCCTaGCACCACGCCCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWGITGA*HHAQLI
Trigger: AATTAGCTGGGCGTGGTGGCAGGCGCCTGTAATTCC...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTGAGACACAGCCTTCCTaGTTAGTCTTCCCCTATTCT +
Preference number: 2 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGETQPS*LVFPYS
Trigger: AGAATAGGGGAAGACTAAGCAGGAAGGCTGTGTCTC...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGGAAACAAATATCACTTaGCTCTCTCTAGGCCTTAGT +
Preference number: 2 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGETNIT*LSLGLS
Trigger: ACTAAGGCCTAGAGAGAGGCAAGTGATATTTGTTTC...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTGTCTGGAATGTGGCATaGGCATCTGTATTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGVWNVA*ASVFPA
Trigger: TGCAGGAAATACAGATGCCCATGCCACATTCCAGAC...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CAA 90 bp TTGGAAAGGTTGGTTTTGACCACCTGCCTGTGTTGTAGAATTGGGTaGAATGCCTCTGACCCCTTGCCAGTGTCCGTTAGTTTCTGTAGC +
Preference number: 2 (lower is better)
Translates to: LERLVLTTCLCCRIG*NASDPLPVSVSFCS
Trigger: GCTACAGAAACTAACGGACACTGGCAAGGGGTCAGAGGCATTCAACCCAATTCTACAACACAGGCAGGTGGTCAAAACCAACCTTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCCTATCCATATCAGGCTaGTTCTGGTTGGAAAGGTTG +
Preference number: 2 (lower is better)
Translates to: PSAVLILRKFLSQQKGDALSISG*FWLERL
Trigger: CAACCTTTCCAACCAGAATCAGCCTGATATGGATAG...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCTATGGAATAAGGAGATaGGAGCATGCTCTGCCAACT +
Preference number: 2 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAYGIRR*EHALPT
Trigger: AGTTGGCAGAGCATGCTCTCATCTCCTTATTCCATA...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGGTGGCCAGAGGCTCTaGTGGCATGTCTCCAGTGAT +
Preference number: 2 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSGGQRL*WHVSSD
Trigger: ATCACTGGAGACATGCCAGCAGAGCCTCTGGCCACC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCAATCTAATCGCCCTGTaGAATGGAGATCATCTGCCC +
Preference number: 2 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLANLIAL*NGDHLP
Trigger: GGGCAGATGATCTCCATTGCACAGGGCGATTAGATT...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCACAATGCCTGGGATTTaGCCTTCTTTTCTGGAGCAC +
Preference number: 2 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLATMPGI*PSFLEH
Trigger: GTGCTCCAGAAAAGAAGGCCAAATCCCAGGCATTGT...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATTGTGTTCTTTCCTCTTaGGAAGTTACAGCTCATCAT +
Preference number: 2 (lower is better)
Translates to: ACSANWLGPECARQVPLHCVLSS*EVTAHH
Trigger: ATGATGAGCTGTAACTTCTCAAGAGGAAAGAACACA...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCCTCTGGACCACAGTTTaGAAATCACAGACAGGTCAA +
Preference number: 2 (lower is better)
Translates to: KAGSQPSPAMKQISLASLLWTTV*KSQTGQ
Trigger: TTGACCTGTCTGTGATTTTCAAACTGTGGTCCAGAG...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCTCCCCAGCTGTAAAATaGGGAACTTGGGTCAAATCA +
Preference number: 2 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLASPAVK*GTWVKS
Trigger: TGATTTGACCCAAGTTCCTCATTTTACAGCTGGGGA...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGGGTGGACTATTGTATTaGCCACTGAACTTTAGAGTA +
Preference number: 2 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLGGLLY*PLNFRV
Trigger: TACTCTAAAGTTCAGTGGTCAATACAATAGTCCACC...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCTTGGTTTTGACCACCTaGCTGTGTTGTAGAATTGGG +
Preference number: 2 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLALVLTT*LCCRIG
Trigger: CCCAATTCTACAACACAGGCAGGTGGTCAAAACCAA...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGACTAGGGCTGAAATCTaGCCACATCATCCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWTRAEI*PHHPAG
Trigger: TCCTGCAGGATGATGTGGGCAGATTTCAGCCCTAGT...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTCCTGTAGAGCTCTGCTaGCCTGACAATGCCTGGGAT +
Preference number: 2 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSPVELC*PDNAWD
Trigger: ATCCCAGGCATTGTCAGGGCAGCAGAGCTCTACAGG...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTACTGCAGATCACCTGTaGAGCTTATATGACCATACA +
Preference number: 2 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGTADHL*SLYDHT
Trigger: TGTATGGTCATATAAGCTCCACAGGTGATCTGCAGT...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGTTCTACTCTTTGGGCTaGGAACTGCATCAGACCCAA +
Preference number: 2 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWFYSLG*ELHQTQ
Trigger: TTGGGTCTGATGCAGTTCTCAGCCCAAAGAGTAGAA...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGCAATGGAGATCATCTaGCCCTCCTTGGTAAGGAGG +
Preference number: 2 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSAMEII*PSLVRR
Trigger: CCTCCTTACCAAGGAGGGGCAGATGATCTCCATTGC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTTATCCTGTAGAGCTCTaGTGCCCTGACAATGCCTGG +
Preference number: 2 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSYPVEL*CPDNAW
Trigger: CCAGGCATTGTCAGGGCAGCAGAGCTCTACAGGATA...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATAATCTCTTTCAGCGATaGAGAGTTTTGTTTTCTGGT +
Preference number: 2 (lower is better)
Translates to: ACSANWLGPECARQVPLHNLFQR*RVLFSG
Trigger: ACCAGAAAACAAAACTCTCCATCGCTGAAAGAGATT...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGGCACCATGTCCCACTaGAATCTCTTTCAGCGATGG +
Preference number: 2 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSGTMSH*NLFQRW
Trigger: CCATCGCTGAAAGAGATTCCAGTGGGACATGGTGCC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCTTCCCAGTCTCTTGGTaGACTATTGTATTGACCACT +
Preference number: 2 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLAFPVSW*TIVLTT
Trigger: AGTGGTCAATACAATAGTCCACCAAGAGACTGGGAA...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCCTAATGTACACAGCTTaGGTTGAAACCTACCAGACT +
Preference number: 2 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLALMYTA*VETYQT
Trigger: AGTCTGGTAGGTTTCAACCCAAGCTGTGTACATTAG...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTAGCCCAGCCCTGCCATaGAACAAATATCACTTGCCT +
Preference number: 2 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSSPALP*NKYHLP
Trigger: AGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCT...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCGGTGGACTATTGTATTaGCCACTGAACTTTAGAGTA +
Preference number: 2 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLAGGLLY*PLNFRV
Trigger: TACTCTAAAGTTCAGTGGTCAATACAATAGTCCACC...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTATGCCTCTGACCCCTTaGCAGTGTCCGTTAGTTTCT +
Preference number: 2 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSMPLTP*QCPLVS
Trigger: AGAAACTAACGGACACTGGCAAGGGGTCAGAGGCAT...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGGCATCTGTATTTCCTaGACGCTCCCAAGGGAATTC +
Preference number: 2 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSGICIS*TLPREF
Trigger: GAATTCCCTTGGGAGCGTGCAGGAAATACAGATGCC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCAATCTCTTTCAGCGATaGAGAGTTTTGTTTTCTGGT +
Preference number: 2 (lower is better)
Translates to: PSAVLILRKFLSQQKGDANLFQR*RVLFSG
Trigger: ACCAGAAAACAAAACTCTCCATCGCTGAAAGAGATT...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR TCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTAATAGTGGTTGTCCTTaGGGGGACTTGTGGTTTGGT +
Preference number: 2 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSNSGCP*GDLWFG
Trigger: ACCAAACCACAAGTCCCCTCAAGGACAACCACTATT...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTCTCCTGTCTGGAGCTTaGTGTCCTCTTCATCTTTAT +
Preference number: 2 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSLLSGA*CPLHLY
Trigger: ATAAAGATGAAGAGGACAGCAAGCTCCAGACAGGAG...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGTCACTGAGTGGAGGTaGGAGGAATTTGTAAACTGT +
Preference number: 2 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSVTEWR*EEFVNC
Trigger: ACAGTTTACAAATTCCTCCCACCTCCACTCAGTGAC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR GCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGAAACAAATATCACTTaGCTCTCTCTAGGCCTTAGT +
Preference number: 2 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSETNIT*LSLGLS
Trigger: ACTAAGGCCTAGAGAGAGGCAAGTGATATTTGTTTC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CCA 72 bp CAGAAGACCTCCTGGTTAGGTGGCCAGAGGCTCTGCTaGCATGTCTCCAGTGATGGGGGCCCCCTACCTCCT +
Preference number: 3 (lower is better)
Translates to: QKTSWLGGQRLC*HVSSDGGPLPP
Trigger: AGGAGGTAGGGGGCCCCCATCACTGGAGACATGCCAGCAGAGCCTCTGGCCACCTAACCAGGAGGTCTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CCA 72 bp AAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCTaGCCAAGGAATGGCATTGTGCAGAGGCATACCGGG +
Preference number: 3 (lower is better)
Translates to: KCAVWVPWGGGS*PRNGIVQRHTG
Trigger: CCCGGTATGCCTCTGCACAATGCCATTCCTTGGCCAGCTCCCTCCACCCCAAGGGACCCAGACTGCACACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR GCA 72 bp TTTCAGAAGACCTCCTGGTTAGGTGGCCAGAGGCTCTaGTGGCATGTCTCCAGTGATGGGGGCCCCCTACCT +
Preference number: 3 (lower is better)
Translates to: FQKTSWLGGQRL*WHVSSDGGPLP
Trigger: AGGTAGGGGGCCCCCATCACTGGAGACATGCCAGCAGAGCCTCTGGCCACCTAACCAGGAGGTCTTCTGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGCCTGCAGAGAGCAGCTaGTTCCAGGGTACCCCTGGT +
Preference number: 3 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGPAESS*FQGTPG
Trigger: ACCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGG...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATGTGTACCTGAGGGCCTaGGTGGTGGCAGTCAGCAGT +
Preference number: 3 (lower is better)
Translates to: ACSANWLGPECARQVPLHVYLRA*VVAVSS
Trigger: ACTGCTGACTGCCACCACCAAGGCCCTCAGGTACAC...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGGAGGGGACTTGTGGTTaGGTTCTAAACCTCCCCATG +
Preference number: 3 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWEGTCG*VLNLPM
Trigger: CATGGGGAGGTTTAGAACCAAACCACAAGTCCCCTC...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCAAGGGAGCTGTCTGGTaGGAATACAGTGTGGGGAAG +
Preference number: 3 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSKGAVW*EYSVGK
Trigger: CTTCCCCACACTGTATTCCAACCAGACAGCTCCCTT...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCCCTGCAGAGAGCAGCTaGTTCCAGGGTACCCCTGGT +
Preference number: 3 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAPAESS*FQGTPG
Trigger: ACCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGG...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR GCA 72 bp TCCTGGGGGACTCTTCTGTTAACTAGGGCTGAAATCTaGCCACATCATCCTGCAGGAGGCAGGCTGTGTACC +
Preference number: 3 (lower is better)
Translates to: SWGTLLLTRAEI*PHHPAGGRLCT
Trigger: GGTACACAGCCTGCCTCCTGCAGGATGATGTGGGCAGATTTCAGCCCTAGTTAACAGAAGAGTCCCCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CCA 72 bp GAATGGCATTGTGCAGAGGCATACCGGGAAGCTCTCTaGATGCAACCCCACCTCTACCGCTTGGCAGTCAAT +
Preference number: 3 (lower is better)
Translates to: EWHCAEAYREAL*MQPHLYRLAVN
Trigger: ATTGACTGCCAAGCGGTAGAGGTGGGGTTGCATCCAGAGAGCTTCCCGGTATGCCTCTGCACAATGCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 72 bp CTTGGTGGTGGCAGTCAGCAGTCATGGGCACAGTTCTaGAGTCTGCGTCCCTCCATAAGGGACAGCATCTAT +
Preference number: 3 (lower is better)
Translates to: LGGGSQQSWAQF*SLRPSIRDSIY
Trigger: ATAGATGCTGTCCCTTATGGAGGGACGCAGACTTCAGAACTGTGCCCATGACTGCTGACTGCCACCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CCA 72 bp ATGTACACAGCTTGGGTTGAAACCTACCAGACTAGGTaGCCTCCTGCAGTCCCCACCTCAGCTCCAGAATCT +
Preference number: 3 (lower is better)
Translates to: MYTAWVETYQTR*PPAVPTSAPES
Trigger: AGATTCTGGAGCTGAGGTGGGGACTGCAGGAGGCCACCTAGTCTGGTAGGTTTCAACCCAAGCTGTGTACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGAATGCCTCTGACCCCTaGCCAGTGTCCGTTAGTTTC +
Preference number: 3 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLNASDP*PVSVSF
Trigger: GAAACTAACGGACACTGGCAAGGGGTCAGAGGCATT...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGTTGGAAAGGTTGGTTTaGACCACCTGCCTGTGTTGT +
Preference number: 3 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGLERLV*TTCLCC
Trigger: ACAACACAGGCAGGTGGTCAAAACCAACCTTTCCAA...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATCACACTAAGGCAATCTaGGCTAGTGCATCAGACGGG +
Preference number: 3 (lower is better)
Translates to: ACSANWLGPECARQVPLHHTKAI*ASASDG
Trigger: CCCGTCTGATGCACTAGCCAAGATTGCCTTAGTGTG...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CCA 72 bp TTTGGCCTTCTTTTCTGGAGCACACTAAGGCAATCTTaGCTAGTGCATCAGACGGGAGTGAGCCCCAGTGAC +
Preference number: 3 (lower is better)
Translates to: FGLLFWSTLRQS*LVHQTGVSPSD
Trigger: GTCACTGGGGCTCACTCCCGTCTGATGCACTAGCCAAGATTGCCTTAGTGTGCTCCAGAAAAGAAGGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATACACCTGTGTCCTGTTaGTTAAGTGTGCAGTCTGGG +
Preference number: 3 (lower is better)
Translates to: ACSANWLGPECARQVPLHTPVSC*LSVQSG
Trigger: CCCAGACTGCACACTTAACAAACAGGACACAGGTGT...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGTGTTGTAGAATTGGGTaGAATGCCTCTGACCCCTTG +
Preference number: 3 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLCCRIG*NASDPL
Trigger: CAAGGGGTCAGAGGCATTCAACCCAATTCTACAACA...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCATCATTCCCAGTCTCTaGGTGGACTATTGTATTGAC +
Preference number: 3 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSIIPSL*VDYCID
Trigger: GTCAATACAATAGTCCACCAAGAGACTGGGAATGAT...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCCACACTAAGGCAATCTaGGCTAGTGCATCAGACGGG +
Preference number: 3 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLAHTKAI*ASASDG
Trigger: CCCGTCTGATGCACTAGCCAAGATTGCCTTAGTGTG...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 72 bp ACTTGCAAGAGGTCACTGAGTAAGCTGGGGCACAGCTaGGGCCAGAAGCAACAGATTTCTACTCTTTGGGCT +
Preference number: 3 (lower is better)
Translates to: TCKRSLSKLGHS*GQKQQISTLWA
Trigger: AGCCCAAAGAGTAGAAATCTGTTGCTTCTGGCCTCAGCTGTGCCCCAGCTTACTCAGTGACCTCTTGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGAGAGGGGACTTGTGGTTaGGTTCTAAACCTCCCCATG +
Preference number: 3 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQREGTCG*VLNLPM
Trigger: CATGGGGAGGTTTAGAACCAAACCACAAGTCCCCTC...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGCGGGGTTTCACCATGTaGGCCAGGCTGGTTTCTTTC +
Preference number: 3 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWRGFTM*ARLVSF
Trigger: GAAAGAAACCAGCCTGGCCAACATGGTGAAACCCCG...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 72 bp CATCTCCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTaGGTCAACAGAAAGGGGACGCCCAGGGTATGGAAT +
Preference number: 3 (lower is better)
Translates to: HLLVLSSFSESS*VNRKGTPRVWN
Trigger: ATTCCATACCCTGGGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CCA 72 bp ACCATACAGGCCCTACTCTGGAGATTCAGCTTCAGTTaGTCTGGAATGTGGCATGGGCATCTGTATTTCCTG +
Preference number: 3 (lower is better)
Translates to: TIQALLWRFSFS*SGMWHGHLYFL
Trigger: CAGGAAATACAGATGCCCATGCCACATTCCAGACCAACTGAAGCTGAATCTCCAGAGTAGGGCCTGTATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CCA 72 bp GTATGGAATAAGGAGATGAGAGCATGCTCTGCCAACTaGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTA +
Preference number: 3 (lower is better)
Translates to: VWNKEMRACSAN*LGPECARQVPL
Trigger: TAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGCTCTCATCTCCTTATTCCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCTGTAAAATGAGGAACTaGGGTCAAATCACTAGCTTT +
Preference number: 3 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSCKMRN*GQITSF
Trigger: AAAGCTAGTGATTTGACCCAAGTTCCTCATTTTACA...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 72 bp ATCTTGGCTAGTGCATCAGACGGGAGTGAGCCCCAGTaGCTGAGTAAATGGAGAATAAGACAAGGAACACGA +
Preference number: 3 (lower is better)
Translates to: ILASASDGSEPQ*LSKWRIRQGTR
Trigger: TCGTGTTCCTTGTCTTATTCTCCATTTACTCAGTCACTGGGGCTCACTCCCGTCTGATGCACTAGCCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTCTGTGTTCTTTCCTCTaGAGAAGTTACAGCTCATCA +
Preference number: 3 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGLCSFL*RSYSSS
Trigger: TGATGAGCTGTAACTTCTCAAGAGGAAAGAACACAG...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGTTCTGGTTGGAAAGGTaGGTTTTGACCACCTGCCTG +
Preference number: 3 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWFWLER*VLTTCL
Trigger: CAGGCAGGTGGTCAAAACCAACCTTTCCAACCAGAA...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCATCATTCCCAGTCTCTaGGTGGACTATTGTATTGAC +
Preference number: 3 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAIIPSL*VDYCID
Trigger: GTCAATACAATAGTCCACCAAGAGACTGGGAATGAT...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTATGTTGAGGGAGGGCTaGGGGCAACACTTCTGGACT +
Preference number: 3 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSMLREG*GQHFWT
Trigger: AGTCCAGAAGTGTTGCCCCAAGCCCTCCCTCAACAT...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGTGTAAAATGAGGAACTaGGGTCAAATCACTAGCTTT +
Preference number: 3 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLCKMRN*GQITSF
Trigger: AAAGCTAGTGATTTGACCCAAGTTCCTCATTTTACA...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGTGTTGTAGAATTGGGTaGAATGCCTCTGACCCCTTG +
Preference number: 3 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWCCRIG*NASDPL
Trigger: CAAGGGGTCAGAGGCATTCAACCCAATTCTACAACA...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 72 bp TCTTCACTGTACTGCAGATCACCTGTGGAGCTTATATaGCCATACAGGCCCTACTCTGGAGATTCAGCTTCA +
Preference number: 3 (lower is better)
Translates to: SSLYCRSPVELI*PYRPYSGDSAS
Trigger: TGAAGCTGAATCTCCAGAGTAGGGCCTGTATGGTCATATAAGCTCCACAGGTGATCTGCAGTACAGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 72 bp TCTTTGATTCTGAACATGGGGACTGTAATGCCTGCCTaGCCTGTGTTAGAACAGCATGTGTCACTGAGTGGA +
Preference number: 3 (lower is better)
Translates to: SLILNMGTVMPA*PVLEQHVSLSG
Trigger: TCCACTCAGTGACACATGCTGTTCTAACACAGGTCAGGCAGGCATTACAGTCCCCATGTTCAGAATCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CCA 72 bp ACCTGTGTTAGAACAGCATGTGTCACTGAGTGGAGGTaGGAGGAATTTGTAAACTGTGAAGTGCTAGCCACA +
Preference number: 3 (lower is better)
Translates to: TCVRTACVTEWR*EEFVNCEVLAT
Trigger: TGTGGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGCTGTTCTAACACAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTTCCTCTTCATCTTTATaGCAAATAGGTACACATGCA +
Preference number: 3 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGSSSSL*QIGTHA
Trigger: TGCATGTGTACCTATTTGCAATAAAGATGAAGAGGA...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGACAATGCCTGGGATTaGGCCTTCTTTTCTGGAGCA +
Preference number: 3 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSDNAWD*AFFSGA
Trigger: TGCTCCAGAAAAGAAGGCCAAATCCCAGGCATTGTC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 72 bp CTGAGGCCAGAAGCAACAGATTTCTACTCTTTGGGCTaGGAACTGCATCAGACCCAAAAGAGCAAAAAGACA +
Preference number: 3 (lower is better)
Translates to: LRPEATDFYSLG*ELHQTQKSKKT
Trigger: TGTCTTTTTGCTCTTTTGGGTCTGATGCAGTTCTCAGCCCAAAGAGTAGAAATCTGTTGCTTCTGGCCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR TCA 72 bp TCTAATCATTCCCAGTCTCTTGGTGGACTATTGTATTaGCCACTGAACTTTAGAGTAGGGCTCGGAACACAG +
Preference number: 3 (lower is better)
Translates to: SNHSQSLGGLLY*PLNFRVGLGTQ
Trigger: CTGTGTTCCGAGCCCTACTCTAAAGTTCAGTGGTCAATACAATAGTCCACCAAGAGACTGGGAATGATTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR-3UTR CAA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTTCCTCTTCATCTTTATaGCAAATAGGTACACATGCA +
Preference number: 3 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSSSSSL*QIGTHA
Trigger: TGCATGTGTACCTATTTGCAATAAAGATGAAGAGGA...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGCCGCTGAGCCACTCCTaGGCCGTCAGGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGPLSHS*AVREGW
Trigger: CCAGCCCTCCCTGACGGCCCAGGAGTGGCTCAGCGG...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGTCTGGTGCAGGGGGATaGCGAGGAAGGCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGSGAGG*RGRPLH
Trigger: GTGGAGGGGCCTTCCTCGTCATCCCCCTGCACCAGA...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCCCACCAGGCCTACTCTaGGCGCGTGGCCCACGAGTT +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSPPGLL*ARGPRV
Trigger: AACTCGTGGGCCACGCGCGCAGAGTAGGCCTGGTGG...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGGCCGTCAGGGAGGGCTaGGCCCCTGCTGTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLAVREG*APAVGG
Trigger: CCCTCCAACAGCAGGGGCCCAGCCCTCCCTGACGGC...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCGCCGTCAGGGAGGGCTaGGCCCCTGCTGTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVAVREG*APAVGG
Trigger: CCCTCCAACAGCAGGGGCCCAGCCCTCCCTGACGGC...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATCCGCTGAGCCACTCCTaGGCCGTCAGGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHPLSHS*AVREGW
Trigger: CCAGCCCTCCCTGACGGCCCAGGAGTGGCTCAGCGG...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCCTCGATTCATCCCGCTaGGCCACTCCTGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSLDSSR*ATPGPS
Trigger: TGACGGCCCAGGAGTGGCTCAGCGGGATGAATCGAG...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTCTGGCATGTCTCCAGTaGTGGGGGCCCCCTACCTCC +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGLACLQ*WGPPTS
Trigger: GGAGGTAGGGGGCCCCCATCACTGGAGACATGCCAG...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCGGCAAACAGGGGCACTaGACCCCCATCGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSGKQGH*TPIVLQ
Trigger: CTGCAGCACGATGGGGGTTCAGTGCCCCTGTTTGCC...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTTTGGCGGCCGTGGGGTaGCACTCCACCAGGCCTACT +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGLAAVG*HSTRPT
Trigger: AGTAGGCCTGGTGGAGTGGCACCCCACGGCCGCCAA...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGGGTGCCCTTTGTAGCTaGCCTCCTGGAGGACGGTCC +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGGALCS*PPGGRS
Trigger: GGACCGTCCTCCAGGAGGCCAGCTACAAAGGGCACC...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CAA 72 bp TCCCTTGGGGTGGAGGGAGCTGGCCAAGGAATGGCATaGTGCAGAGGCATACCGGGAAGCTCTCTGGATGCA +
Preference number: 4 (lower is better)
Translates to: SLGVEGAGQGMA*CRGIPGSSLDA
Trigger: TGCATCCAGAGAGCTTCCCGGTATGCCTCTGCACAATGCCATTCCTTGGCCAGCTCCCTCCACCCCAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCGGCAGGCTGTGTACCTaGGGGCCTTGGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVGRLCT*GPWWWQ
Trigger: CTGCCACCACCAAGGCCCTCAGGTACACAGCCTGCC...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGCTGGCATGTCTCCAGTaGTGGGGGCCCCCTACCTCC +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLLACLQ*WGPPTS
Trigger: GGAGGTAGGGGGCCCCCATCACTGGAGACATGCCAG...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGGGAGGGCTGGGCCCCTaGTGTTGGAGGGTATATGTC +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGGGLGP*CWRVYV
Trigger: GACATATACCCTCCAACAGCAGGGGCCCAGCCCTCC...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGACTGAACCCCCATCGTaGTGCAGCTGCGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWTEPPS*CSCGSQ
Trigger: CTGGGAACCGCAGCTGCAGCACGATGGGGGTTCAGT...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTGGTGCCCTTTGTAGCTaGCCTCCTGGAGGACGGTCC +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGGALCS*PPGGRS
Trigger: GGACCGTCCTCCAGGAGGCCAGCTACAAAGGGCACC...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGTCTCTCTGCAGGCAGTaGGTGGGGTCTCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGSLCRQ*VGSQQL
Trigger: GAGCTGCTGAGACCCCACCCACTGCCTGCAGAGAGA...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGGCCTGGACCTCTCGCTaGGTCAACAGCTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLAWTSR*VNSSRS
Trigger: GCTCCGGGAGCTGTTGACCCAGCGAGAGGTCCAGGC...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGACCTACCAGACTAGGTaGCCTCCTGCAGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWTYQTR*PPAVPT
Trigger: GGTGGGGACTGCAGGAGGCCACCTAGTCTGGTAGGT...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTTCTGGTGCAGGGGGATaGCGAGGAAGGCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGSGAGG*RGRPLH
Trigger: GTGGAGGGGCCTTCCTCGTCATCCCCCTGCACCAGA...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGCTCGATTCATCCCGCTaGGCCACTCCTGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLLDSSR*ATPGPS
Trigger: TGACGGCCCAGGAGTGGCTCAGCGGGATGAATCGAG...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCTGGGTTGAATGCCTCTaGCCCCTTGCCAGTGTCCGT +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSWVECL*PLASVR
Trigger: ACGGACACTGGCAAGGGGTCAGAGGCATTCAACCCA...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCGGCAGGCTGTGTACCTaGGGGCCTTGGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFGRLCT*GPWWWQ
Trigger: CTGCCACCACCAAGGCCCTCAGGTACACAGCCTGCC...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTCCACCAGGCCTACTCTaGGCGCGTGGCCCACGAGTT +
Preference number: 4 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGPPGLL*ARGPRV
Trigger: AACTCGTGGGCCACGCGCGCAGAGTAGGCCTGGTGG...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTTTGGCGGCCGTGGGGTaGCACTCCACCAGGCCTACT +
Preference number: 4 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGLAAVG*HSTRPT
Trigger: AGTAGGCCTGGTGGAGTGGCACCCCACGGCCGCCAA...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATCTGGAGGACGGTCCCTaGTCGGGGGTCAATAACCCG +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHLEDGP*SGVNNP
Trigger: CGGGTTATTGACCCCCGAGCAGGGACCGTCCTCCAG...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCTCCCACAAGGCCACCTaGCGGTTGTTCCATCGGGAT +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSSHKAT*RLFHRD
Trigger: ATCCCGATGGAACAACCGGCAGGTGGCCTTGTGGGA...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCGTCTCTGCTCAGAGCTaGTCTGAGCCCATCCGCAAG +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSVSAQS*SEPIRK
Trigger: CTTGCGGATGGGCTCAGAGCAGCTCTGAGCAGAGAC...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCGGGAAGCTCTCTGGATaGAACCCCACCTCTACCGCT +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSGKLSG*NPTSTA
Trigger: AGCGGTAGAGGTGGGGTTGCATCCAGAGAGCTTCCC...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGTCCAACTTCCCTGTCTaGTGCAGGGGGATGACGAGG +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGSNFPV*CRGMTR
Trigger: CCTCGTCATCCCCCTGCACCAGACAGGGAAGTTGGA...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCCCTACTCTGCGCGCGTaGCCCACGAGTTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVPTLRA*PTSSFL
Trigger: CAGGAAGGAACTCGTGGGCCACGCGCGCAGAGTAGG...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGCCAGTTCCAACTGTTTaGCCTGGACCTCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGPVPTV*PGPLAG
Trigger: CCCAGCGAGAGGTCCAGGCCAAACAGTTGGAACTGG...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCCTCCCAAGTCGCTaGAATTACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGSLPSR*NYRRLP
Trigger: TGGCAGGCGCCTGTAATTCCAGCGACTTGGGAGGCT...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGGTTAAGTGTGCAGTCTaGGTCCCTTGGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWVKCAV*VPWGGG
Trigger: CCCTCCACCCCAAGGGACCCAGACTGCACACTTAAC...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGGCTCTGCCAACTGGCTaGGACCTGAATGTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWALPTG*DLNVLG
Trigger: GCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGC...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTCAGAAGTGGTTGTCGTaGACGCTGCGGGTGATAGGC +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGQKWLS*TLRVIG
Trigger: GCCTATCACCCGCAGCGTTCACGACAACCACTTCTG...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGCAGTCACAACTGCAATaGAGTGGGGGTTCACGGCAC +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGQSQLQ*SGGSRH
Trigger: GTGCCGTGAACCCCCACTTCATTGCAGTTGTGACTG...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTAGCCACTGCGCCTGGTaGGACTGGTTTCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGSHCAW*DWFQTP
Trigger: GGGAGTTTGAAACCAGTCTCACCAGGCGCAGTGGCT...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGAACTTCCCTGTCTGGTaGAGGGGGATGACGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWNFPVW*RGMTRK
Trigger: CTTCCTCGTCATCCCCCTGCACCAGACAGGGAAGTT...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAACTTCCCTGTCTGGTaGAGGGGGATGACGAGGAAG +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGNFPVW*RGMTRK
Trigger: CTTCCTCGTCATCCCCCTGCACCAGACAGGGAAGTT...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTGTCTCTGCTCAGAGCTaGTCTGAGCCCATCCGCAAG +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGVSAQS*SEPIRK
Trigger: CTTGCGGATGGGCTCAGAGCAGCTCTGAGCAGAGAC...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCGGAATTACAGGCGCCTaGCACCACGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSGITGA*HHAQLI
Trigger: AATTAGCTGGGCGTGGTGGCAGGCGCCTGTAATTCC...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGATGATCTTGGTTCACTaGAACCTCCGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWMILVH*NLRLPG
Trigger: GCCTGGGAGGCGGAGGTTGCAGTGAACCAAGATCAT...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGCCTGTAGAGCTCTGCTaGCCTGACAATGCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGPVELC*PDNAWD
Trigger: ATCCCAGGCATTGTCAGGGCAGCAGAGCTCTACAGG...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTGGGAAGCTCTCTGGATaGAACCCCACCTCTACCGCT +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGGKLSG*NPTSTA
Trigger: AGCGGTAGAGGTGGGGTTGCATCCAGAGAGCTTCCC...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGATTGTTTGTCCAGGCTaGGCCTGCAGGCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWIVCPG*ACRPER
Trigger: CCTTTCTGGCCTGCAGGCCCAGCCTGGACAAACAAT...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS-3UTR CCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGAGACATGACGGAACTTaGAGCTCCGGTACTGGGGGT +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWRHDGT*SSGTGG
Trigger: ACCCCCAGTACCGGAGCTCCAAGTTCCGTCATGTCT...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATTGCGGTCTTTGCAGGTaGTGGCCAACAGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHCGLCR*WPTGCR
Trigger: ACGGCAGCCTGTTGGCCACCACCTGCAAAGACCGCA...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCACAGAGAGGTTATCCTaGTCCCACAAGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSTERLS*SHKATC
Trigger: GCAGGTGGCCTTGTGGGACCAGGATAACCTCTCTGT...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGCTGGGCCCCTGCTGTTaGAGGGTATATGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWLGPCC*RVYVLL
Trigger: CAAGAGGACATATACCCTCCAACAGCAGGGGCCCAG...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGTCTCTCTGCAGGCAGTaGGTGGGGTCTCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLSLCRQ*VGSQQL
Trigger: GAGCTGCTGAGACCCCACCCACTGCCTGCAGAGAGA...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGGGCCAGAGGCTCTGCTaGCATGTCTCCAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLGQRLC*HVSSDG
Trigger: CCCATCACTGGAGACATGCCAGCAGAGCCTCTGGCC...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCACCTACCAGACTAGGTaGCCTCCTGCAGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVTYQTR*PPAVPT
Trigger: GGTGGGGACTGCAGGAGGCCACCTAGTCTGGTAGGT...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGGTCCCAGCTCCTGTCTaGAGCTTGCTGTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGVPAPV*SLLSSS
Trigger: TGAAGAGGACAGCAAGCTCCAGACAGGAGCTGGGAC...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGTACCGGGAAGCTCTCTaGATGCAACCCCACCTCTAC +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGYREAL*MQPHLY
Trigger: GTAGAGGTGGGGTTGCATCCAGAGAGCTTCCCGGTA...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGTACCGGGAAGCTCTCTaGATGCAACCCCACCTCTAC +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWYREAL*MQPHLY
Trigger: GTAGAGGTGGGGTTGCATCCAGAGAGCTTCCCGGTA...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGGCATGCTCTGCCAACTaGCTGGGACCTGAATGTGCT +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGACSAN*LGPECA
Trigger: AGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CAA 72 bp CTGCAGCTGCGGTTCCCAGAGATGTTGAGGGAGGGCTaGGGGCAACACTTCTGGACTTTTAAGGAGCCACCA +
Preference number: 4 (lower is better)
Translates to: LQLRFPEMLREG*GQHFWTFKEPP
Trigger: TGGTGGCTCCTTAAAAGTCCAGAAGTGTTGCCCCAAGCCCTCCCTCAACATCTCTGGGAACCGCAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGATTCAAGAGCCGGGGTaGGGCTGGGGCCATGGAATT +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLIQEPG*GWGHGI
Trigger: AATTCCATGGCCCCAGCCTCACCCCGGCTCTTGAAT...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTAAGCTGGGGCACAGCTaGGGCCAGAAGCAACAGATT +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGKLGHS*GQKQQI
Trigger: AATCTGTTGCTTCTGGCCTCAGCTGTGCCCCAGCTT...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGTCATGGGCACAGTTCTaGAGTCTGCGTCCCTCCATA +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWSWAQF*SLRPSI
Trigger: TATGGAGGGACGCAGACTTCAGAACTGTGCCCATGA...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCGGCAAACAGGGGCACTaGACCCCCATCGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KAGSQPSPAMKQISLASLGKQGH*TPIVLQ
Trigger: CTGCAGCACGATGGGGGTTCAGTGCCCCTGTTTGCC...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCTCCCCAGGCAGAGTCTaGAACAGCTGGCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFSPGRV*NSWQER
Trigger: CCTCTCCTGCCAGCTGTTGCAGACTCTGCCTGGGGA...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS-3UTR GCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGCTCCGGTACTGGGGGTaGCATGACATCTGCTTGTTA +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGLRYWG*HDICLL
Trigger: TAACAAGCAGATGTCATGGCACCCCCAGTACCGGAG...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS-3UTR GCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTGAATCTTGCGGTCTTTaGAGGTGGTGGCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGESCGL*RWWPTG
Trigger: GCCTGTTGGCCACCACCTGCAAAGACCGCAAGATTC...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCGGAGGGCTGGGCCCCTaGTGTTGGAGGGTATATGTC +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFGGLGP*CWRVYV
Trigger: GACATATACCCTCCAACAGCAGGGGCCCAGCCCTCC...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTCAGCCTGTGTTCTGCTaGCCACCTTGGCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGQPVFC*PPWHLL
Trigger: GAGAAGATGCCAAGGTGGGCAGCAGAACACAGGCTG...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATCTGCCCACATCATCCTaGAGGAGGCAGGCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHLPTSS*RRQAVY
Trigger: GTACACAGCCTGCCTCCTGCAGGATGATGTGGGCAG...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATGGTGGCCAGAGGCTCTaGTGGCATGTCTCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHGGQRL*WHVSSD
Trigger: ATCACTGGAGACATGCCAGCAGAGCCTCTGGCCACC...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGGCAATGGAGATCATCTaGCCCTCCTTGGTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGAMEII*PSLVRR
Trigger: CCTCCTTACCAAGGAGGGGCAGATGATCTCCATTGC...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCGAACCCCCATCGTGCTaGAGCTGCGGTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAEPPSC*SCGSQR
Trigger: TCTCTGGGAACCGCAGCTGCAGCACGATGGGGGTTC...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGCTCCGGTACTGGGGGTaGCATGACATCTTGATGACT +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWLRYWG*HDILMT
Trigger: AGTCATCAAGATGTCATGGCACCCCCAGTACCGGAG...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375077.5
CDS-3UTR CCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTAGACATGACGGAACTTaGAGCTCCGGTACTGGGGGT +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGRHDGT*SSGTGG
Trigger: ACCCCCAGTACCGGAGCTCCAAGTTCCGTCATGTCT...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTTGCGGTCTTTGCAGGTaGTGGCCAACAGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGCGLCR*WPTGCR
Trigger: ACGGCAGCCTGTTGGCCACCACCTGCAAAGACCGCA...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTACAGAGAGGTTATCCTaGTCCCACAAGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGTERLS*SHKATC
Trigger: GCAGGTGGCCTTGTGGGACCAGGATAACCTCTCTGT...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAAGGGACACCAGGATTaGGTCTCGATTCATCCCGCT +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGKGHQD*VSIHPA
Trigger: AGCGGGATGAATCGAGACCCAATCCTGGTGTCCCTT...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCGGTTGGAATACAGTGTaGGGAAGGGAGACACAGCCT +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSGWNTV*GRETQP
Trigger: AGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACC...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCGACCTCCTGGTTAGGTaGCCAGAGGCTCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDADLLVR*PEALLA
Trigger: TGCCAGCAGAGCCTCTGGCCACCTAACCAGGAGGTC...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAATCGCCCTGTGCAATaGAGATCATCTGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGNRPVQ*RSSAPP
Trigger: AGGAGGGGCAGATGATCTCCATTGCACAGGGCGATT...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGGAGCTGGCCAAGGAATaGCATTGTGCAGAGGCATAC +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGELAKE*HCAEAY
Trigger: GTATGCCTCTGCACAATGCCATTCCTTGGCCAGCTC...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGTGGGGTGGAGGGAGCTaGCCAAGGAATGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLWGGGS*PRNGIV
Trigger: CACAATGCCATTCCTTGGCCAGCTCCCTCCACCCCA...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCCTGGGTCCCTTGGGGTaGAGGGAGCTGGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: KAGSQPSPAMKQISLASLLGPLG*RELAKE
Trigger: TTCCTTGGCCAGCTCCCTCCACCCCAAGGGACCCAG...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATGTTAAGTGTGCAGTCTaGGTCCCTTGGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHVKCAV*VPWGGG
Trigger: CCCTCCACCCCAAGGGACCCAGACTGCACACTTAAC...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCGGGACGCCCAGGGTATaGAATAAGGAGATGAGAGCA +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSGTPRV*NKEMRA
Trigger: TGCTCTCATCTCCTTATTCCATACCCTGGGCGTCCC...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGGGGACGCCCAGGGTATaGAATAAGGAGATGAGAGCA +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWGTPRV*NKEMRA
Trigger: TGCTCTCATCTCCTTATTCCATACCCTGGGCGTCCC...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCGGCAGGAGAGGATGGTaGGGTACCTCCTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAGRRGW*GTSSLL
Trigger: AAGCAGAGAGGAGGTACCTCACCATCCTCTCCTGCC...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS-3UTR TCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTTGCTCAGAGCTGCTCTaGGCCCATCCGCAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGCSELL*AHPQVF
Trigger: AAAAACTTGCGGATGGGCTCAGAGCAGCTCTGAGCA...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTAGCCACTGCGCCTGGTaGGACTGGTTTCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGSHCAW*DWFQTP
Trigger: GGGAGTTTGAAACCAGTCTCACCAGGCGCAGTGGCT...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCGTTGTAGAATTGGGTTaGATGCCTCTGACCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSVVELG*MPLTPC
Trigger: GCAAGGGGTCAGAGGCATTCAACCCAATTCTACAAC...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGCCTGTGGAGCTTATATaGCCATACAGGCCCTACTCT +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGPVELI*PYRPYS
Trigger: AGAGTAGGGCCTGTATGGTCATATAAGCTCCACAGG...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCAACAGCATGTGTCACTaGGTGGAGGTGGGAGGAATT +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSNSMCH*VEVGGI
Trigger: AATTCCTCCCACCTCCACTCAGTGACACATGCTGTT...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCGTACTGGGGGTGCCATaGCATCTTGATGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAVLGVP*HLDDCR
Trigger: GCGGCAGTCATCAAGATGTCATGGCACCCCCAGTAC...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375077.5
CDS-3UTR GCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCCCTTGCTGGCTGGTTTaGCAAAGACATGACGGAACT +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSPCWLV*QRHDGT
Trigger: AGTTCCGTCATGTCTTTGGCAAACCAGCCAGCAAGG...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGCCAGAAACAGCACTTTaGTGGCCCGGTGCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLPETAL*WPGALC
Trigger: ACAAAGGGCACCGGGCCAGCAAAGTGCTGTTTCTGG...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATCCAGAAACAGCACTTTaGTGGCCCGGTGCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHPETAL*WPGALC
Trigger: ACAAAGGGCACCGGGCCAGCAAAGTGCTGTTTCTGG...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGTGTTCCATCGGGATGTaGCTGTGGACATCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWCSIGM*LWTSAS
Trigger: AGAAGCTGATGTCCACAGGCACATCCCGATGGAACA...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCCCACCACGTAGAGCATaGTGGTGTCCGCGTCATAGA +
Preference number: 4 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVPPRRA*WCPRHR
Trigger: TCTATGACGCGGACACCAGCATGCTCTACGTGGTGG...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGCTCCAGCCTGTGTTCTaGTGCCCACCTTGGCATCTT +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLLQPVF*CPPWHL
Trigger: AAGATGCCAAGGTGGGCAGCAGAACACAGGCTGGAG...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGGGAATTACAGGCGCCTaGCACCACGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLGITGA*HHAQLI
Trigger: AATTAGCTGGGCGTGGTGGCAGGCGCCTGTAATTCC...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTTCAGGTGGCAGATCCTaGAGAGAGCAGCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGSGGRS*REQLVP
Trigger: TGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGA...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTTATCCTGTAGAGCTCTaGTGCCCTGACAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGYPVEL*CPDNAW
Trigger: CCAGGCATTGTCAGGGCAGCAGAGCTCTACAGGATA...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCTTGGAGCTCCGGTACTaGGGGTGCCATGACATCTGC +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFLELRY*GCHDIC
Trigger: GCAGATGTCATGGCACCCCCAGTACCGGAGCTCCAA...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS-3UTR CCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCACAACTGCAATGAAGTaGGGGTTCACGGCACAGAAG +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSTTAMK*GFTAQK
Trigger: CTTCTGTGCCGTGAACCCCCACTTCATTGCAGTTGT...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCTCCAACTTCCCTGTCTaGTGCAGGGGGATGACGAGG +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDASNFPV*CRGMTR
Trigger: CCTCGTCATCCCCCTGCACCAGACAGGGAAGTTGGA...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGACCTACTCTGCGCGCGTaGCCCACGAGTTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRPTLRA*PTSSFL
Trigger: CAGGAAGGAACTCGTGGGCCACGCGCGCAGAGTAGG...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGATCGGGATGTGCCTGTaGACATCAGCTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWIGMCL*TSASSG
Trigger: ACCTGAAGAAGCTGATGTCCACAGGCACATCCCGAT...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATCCACGTAGAGCATGCTaGTGTCCGCGTCATAGAAGG +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHPRRAC*CPRHRR
Trigger: CCTTCTATGACGCGGACACCAGCATGCTCTACGTGG...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTGTCGAGTCCTCTCTTTaGCATGACACCGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGVESSL*HDTDPL
Trigger: AAGGGGATCGGTGTCATGCCAAAGAGAGGACTCGAC...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGCTGGGCCCCTGCTGTTaGAGGGTATATGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLLGPCC*RVYVLL
Trigger: CAAGAGGACATATACCCTCCAACAGCAGGGGCCCAG...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCCCAGTTCCAACTGTTTaGCCTGGACCTCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAPVPTV*PGPLAG
Trigger: CCCAGCGAGAGGTCCAGGCCAAACAGTTGGAACTGG...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGATGAGCCACTGCGTCTaGCCCAGTCTTCCCCTATTC +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLMSHCV*PSLPLF
Trigger: GAATAGGGGAAGACTGGGCCAGACGCAGTGGCTCAT...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCAGCCTCCCAAGTCGCTaGAATTACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDASLPSR*NYRRLP
Trigger: TGGCAGGCGCCTGTAATTCCAGCGACTTGGGAGGCT...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTGGTCAAGGTTTCAGGTaGCAGATCCTGCAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGGQGFR*QILQRA
Trigger: TGCTCTCTGCAGGATCTGCCACCTGAAACCTTGACC...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCGGCCAGAGGCTCTGCTaGCATGTCTCCAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLAGQRLC*HVSSDG
Trigger: CCCATCACTGGAGACATGCCAGCAGAGCCTCTGGCC...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCGACCTCCTGGTTAGGTaGCCAGAGGCTCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: KAGSQPSPAMKQISLASLDLLVR*PEALLA
Trigger: TGCCAGCAGAGCCTCTGGCCACCTAACCAGGAGGTC...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTGCTCTGCCAACTGGCTaGGACCTGAATGTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGALPTG*DLNVLG
Trigger: GCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGC...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CAA 72 bp CGGGAAGCTCTCTGGATGCAACCCCACCTCTACCGCTaGGCAGTCAATGACCTTGGCATGATGTTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: REALWMQPHLYR*AVNDLGMMFLH
Trigger: GTGAAGAAACATCATGCCAAGGTCATTGACTGCCAAGCGGTAGAGGTGGGGTTGCATCCAGAGAGCTTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCGGTTTGCCAAAGACATaGCGGAACTTGGAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAGLPKT*RNLELR
Trigger: CCGGAGCTCCAAGTTCCGTCATGTCTTTGGCAAACC...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCCAGTCACAACTGCAATaGAGTGGGGGTTCACGGCAC +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAQSQLQ*SGGSRH
Trigger: GTGCCGTGAACCCCCACTTCATTGCAGTTGTGACTG...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCATTCAAGAGCCGGGGTaGGGCTGGGGCCATGGAATT +
Preference number: 4 (lower is better)
Translates to: KAGSQPSPAMKQISLASLIQEPG*GWGHGI
Trigger: AATTCCATGGCCCCAGCCTCACCCCGGCTCTTGAAT...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCCTGGTCTTGAACTCCTaGCCTCAGAAGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFLVLNS*PQKIRP
Trigger: TGGGCGGATCTTCTGAGGTCAGGAGTTCAAGACCAG...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCTGGGTTGAATGCCTCTaGCCCCTTGCCAGTGTCCGT +
Preference number: 4 (lower is better)
Translates to: KAGSQPSPAMKQISLASLWVECL*PLASVR
Trigger: ACGGACACTGGCAAGGGGTCAGAGGCATTCAACCCA...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGTCATGGGCACAGTTCTaGAGTCTGCGTCCCTCCATA +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLSWAQF*SLRPSI
Trigger: TATGGAGGGACGCAGACTTCAGAACTGTGCCCATGA...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCTTCTCAGAAAGTTCCTaGGTCAACAGAAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSFSESS*VNRKGT
Trigger: CGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAA...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGTGTCCAGGCTGGGCCTaGAGGCCAGAAAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWCPGWA*RPERQE
Trigger: CTCCTGCCTTTCTGGCCTGCAGGCCCAGCCTGGACA...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS-3UTR GCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTCGTAGCAGTTCTCCTTaGTGGCTGGTTTGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGRSSSP*WLVCQR
Trigger: TCTTTGGCAAACCAGCCAGCAAGGAGAACTGCTACG...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTTTCCTGGTCAGCAGCTaGTTGGGGATGCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGFLVSS*LGMLQI
Trigger: GATCTGGAGCATCCCCAAGCAGCTGCTGACCAGGAA...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCGAATCTTGCGGTCTTTaGAGGTGGTGGCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFESCGL*RWWPTG
Trigger: GCCTGTTGGCCACCACCTGCAAAGACCGCAAGATTC...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTCAGCCTGTGTTCTGCTaGCCACCTTGGCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGQPVFC*PPWHLL
Trigger: GAGAAGATGCCAAGGTGGGCAGCAGAACACAGGCTG...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTCTCCAGCCTGTGTTCTaGTGCCCACCTTGGCATCTT +
Preference number: 4 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGLQPVF*CPPWHL
Trigger: AAGATGCCAAGGTGGGCAGCAGAACACAGGCTGGAG...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGCTTTGGGCTGAGAACTaGATCAGACCCAAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGLWAEN*IRPKRA
Trigger: TGCTCTTTTGGGTCTGATGCAGTTCTCAGCCCAAAG...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATTCAGGTGGCAGATCCTaGAGAGAGCAGCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHSGGRS*REQLVP
Trigger: TGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGA...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCCTGCCCACATCATCCTaGAGGAGGCAGGCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLALPTSS*RRQAVY
Trigger: GTACACAGCCTGCCTCCTGCAGGATGATGTGGGCAG...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTACTAGGGCTGAAATCTaGCCACATCATCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGTRAEI*PHHPAG
Trigger: TCCTGCAGGATGATGTGGGCAGATTTCAGCCCTAGT...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCGGTGGCCAGAGGCTCTaGTGGCATGTCTCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: KAGSQPSPAMKQISLASLGGQRL*WHVSSD
Trigger: ATCACTGGAGACATGCCAGCAGAGCCTCTGGCCACC...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGAATCTAATCGCCCTGTaGAATGGAGATCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWNLIAL*NGDHLP
Trigger: GGGCAGATGATCTCCATTGCACAGGGCGATTAGATT...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTGGCATCTGTATTTCCTaGACGCTCCCAAGGGAATTC +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGGICIS*TLPREF
Trigger: GAATTCCCTTGGGAGCGTGCAGGAAATACAGATGCC...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGAACTGAACCCCCATCGTaGTGCAGCTGCGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRTEPPS*CSCGSQ
Trigger: CTGGGAACCGCAGCTGCAGCACGATGGGGGTTCAGT...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGAAGGAGATGAGAGCATaGTCTGCCAACTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLKEMRA*SANWLG
Trigger: TCCCAGCCAGTTGGCAGAGCATGCTCTCATCTCCTT...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATAAGGAGATGAGAGCATaGTCTGCCAACTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHKEMRA*SANWLG
Trigger: TCCCAGCCAGTTGGCAGAGCATGCTCTCATCTCCTT...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCGTGCCCGCAGACTTTTaGGTAGTGGGGGTCCAACTT +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAVPADF*VVGVQL
Trigger: AAGTTGGACCCCCACTACCCAAAAGTCTGCGGGCAC...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCGAAACAGCACTTTGCTaGCCCGGTGCCCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFETALC*PGALCS
Trigger: GCTACAAAGGGCACCGGGCCAGCAAAGTGCTGTTTC...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATGGCACCATGTCCCACTaGAATCTCTTTCAGCGATGG +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHGTMSH*NLFQRW
Trigger: CCATCGCTGAAAGAGATTCCAGTGGGACATGGTGCC...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTGGGGTTTCACCATGTTaGCCAGGCTGGTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGGVSPC*PGWFLS
Trigger: AGAAAGAAACCAGCCTGGCCAACATGGTGAAACCCC...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCAGGGAGCTGTCTGGTTaGAATACAGTGTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVRELSG*NTVWGR
Trigger: CCTTCCCCACACTGTATTCCAACCAGACAGCTCCCT...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGATTCAGCTTCAGTTaGTCTGGAATGTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGRFSFS*SGMWHG
Trigger: CCCATGCCACATTCCAGACCAACTGAAGCTGAATCT...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGAGATTCAGCTTCAGTTaGTCTGGAATGTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWRFSFS*SGMWHG
Trigger: CCCATGCCACATTCCAGACCAACTGAAGCTGAATCT...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGACAATGCCTGGGATTTaGCCTTCTTTTCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGTMPGI*PSFLEH
Trigger: GTGCTCCAGAAAAGAAGGCCAAATCCCAGGCATTGT...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTAGCAGCCTGGGTTTATaGGGATTAAAAGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGSSLGL*GLKESS
Trigger: GCTGGACTCTTTTAATCCTCATAAACCCAGGCTGCT...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS-3UTR TCA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGACAGAAGTGGTTGTCGTaGACGCTGCGGGTGATAGGC +
Preference number: 4 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRQKWLS*TLRVIG
Trigger: GCCTATCACCCGCAGCGTTCACGACAACCACTTCTG...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGCTCTGGACCACAGTTTaGAAATCACAGACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGLWTTV*KSQTGQ
Trigger: TTGACCTGTCTGTGATTTTCAAACTGTGGTCCAGAG...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCAAGCTGGGGCACAGCTaGGGCCAGAAGCAACAGATT +
Preference number: 4 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLAKLGHS*GQKQQI
Trigger: AATCTGTTGCTTCTGGCCTCAGCTGTGCCCCAGCTT...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATGTTGTAGAATTGGGTTaGATGCCTCTGACCCCTTGC +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHVVELG*MPLTPC
Trigger: GCAAGGGGTCAGAGGCATTCAACCCAATTCTACAAC...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGGGGAGTGAGCCCCAGTaGCTGAGTAAATGGAGAATA +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLGSEPQ*LSKWRI
Trigger: TATTCTCCATTTACTCAGTCACTGGGGCTCACTCCC...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGGGAGATAAATGCCTCTaGTCACCCTTAATCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWGDKCL*SPLISS
Trigger: GGAACTGATTAAGGGTGAGCAGAGGCATTTATCTCC...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS-3UTR GCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATCCTTGCTGGCTGGTTTaGCAAAGACATGACGGAACT +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHPCWLV*QRHDGT
Trigger: AGTTCCGTCATGTCTTTGGCAAACCAGCCAGCAAGG...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCATCTCAGCCCAGCCCTaGCATGAAACAAATATCACT +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSISAQP*HETNIT
Trigger: AGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGAT...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGAGAGAGGGCAGGACTTaGAAGAGGTCACTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLREGRT*KRSLSK
Trigger: CTTACTCAGTGACCTCTTGCAAGTCCTGCCCTCTCT...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCATGCCTCTGACCCCTTaGCAGTGTCCGTTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVMPLTP*QCPLVS
Trigger: AGAAACTAACGGACACTGGCAAGGGGTCAGAGGCAT...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGGGCATCTGTATTTCCTaGACGCTCCCAAGGGAATTC +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLGICIS*TLPREF
Trigger: GAATTCCCTTGGGAGCGTGCAGGAAATACAGATGCC...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGCTCCTGTCTGGAGCTTaGTGTCCTCTTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWLLSGA*CPLHLY
Trigger: ATAAAGATGAAGAGGACAGCAAGCTCCAGACAGGAG...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCTATCCTGTAGAGCTCTaGTGCCCTGACAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAYPVEL*CPDNAW
Trigger: CCAGGCATTGTCAGGGCAGCAGAGCTCTACAGGATA...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCAGAGTCTGCAACAGCTaGCAGGAGAGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KAGSQPSPAMKQISLASLRVCNS*QERMVR
Trigger: CCTCACCATCCTCTCCTGCCAGCTGTTGCAGACTCT...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS-3UTR CCA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCGTTCTCCTTGCTGGCTaGTTTGCCAAAGACATGACG +
Preference number: 4 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVVLLAG*FAKDMT
Trigger: CGTCATGTCTTTGGCAAACCAGCCAGCAAGGAGAAC...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGATCGGGATGTGCCTGTaGACATCAGCTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLIGMCL*TSASSG
Trigger: ACCTGAAGAAGCTGATGTCCACAGGCACATCCCGAT...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCACCGATCCCCTTCTGTaGGTTATAGGAGCGGTACTC +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDATDPLL*VIGAVL
Trigger: GAGTACCGCTCCTATAACCCACAGAAGGGGATCGGT...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCGGTTGGAATACAGTGTaGGGAAGGGAGACACAGCCT +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAGWNTV*GRETQP
Trigger: AGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACC...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCAGGGAGCTGTCTGGTTaGAATACAGTGTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFRELSG*NTVWGR
Trigger: CCTTCCCCACACTGTATTCCAACCAGACAGCTCCCT...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGCAGCTTCAGTTGGTCTaGAATGTGGCATGGGCATCT +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLQLQLV*NVAWAS
Trigger: AGATGCCCATGCCACATTCCAGACCAACTGAAGCTG...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCAGAATAAACCACAGCTaGGTAAGGGGCAAACAGGGG +
Preference number: 4 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVRINHS*VRGKQG
Trigger: CCCCTGTTTGCCCCTTACCCAGCTGTGGTTTATTCT...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTACACTAAGGCAATCTTaGCTAGTGCATCAGACGGGA +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGTLRQS*LVHQTG
Trigger: TCCCGTCTGATGCACTAGCCAAGATTGCCTTAGTGT...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCTTGGAGCTCCGGTACTaGGGGTGCCATGACATCTTG +
Preference number: 4 (lower is better)
Translates to: KAGSQPSPAMKQISLASLLELRY*GCHDIL
Trigger: CAAGATGTCATGGCACCCCCAGTACCGGAGCTCCAA...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375077.5
CDS-3UTR TCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCGGCAGGAGGCCAGACTaGTTGCCCTTCTCAAATTTC +
Preference number: 4 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLAGRRPD*LPFSNF
Trigger: GAAATTTGAGAAGGGCAATCAGTCTGGCCTCCTGCC...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS-3UTR TCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCGTACTGGGGGTGCCATaGCATCTGCTTGTTAACATG +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAVLGVP*HLLVNM
Trigger: CATGTTAACAAGCAGATGTCATGGCACCCCCAGTAC...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS-3UTR TCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATCAAAAGGGTTCCACTTaGCATCCAAAACGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHQKGST*HPKRCL
Trigger: GAGGCAACGTTTTGGATGTCAAGTGGAACCCTTTTG...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTAGCCCAGCCCTGCCATaGAACAAATATCACTTGCCT +
Preference number: 4 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGSPALP*NKYHLP
Trigger: AGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCT...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCAGCCCAGCCCTGCCATaGAACAAATATCACTTGCCT +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFSPALP*NKYHLP
Trigger: AGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCT...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTTATGGAATAAGGAGATaGGAGCATGCTCTGCCAACT +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGYGIRR*EHALPT
Trigger: AGTTGGCAGAGCATGCTCTCATCTCCTTATTCCATA...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGTTCTCAAATTTCAAGTaGCAGCAGCCTGGGTTTATG +
Preference number: 4 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWFSNFK*QQPGFM
Trigger: CATAAACCCAGGCTGCTGGCACTTGAAATTTGAGAA...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS-3UTR GCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTCGTAGCAGTTCTCCTTaGTGGCTGGTTTGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGRSSSP*WLVCQR
Trigger: TCTTTGGCAAACCAGCCAGCAAGGAGAACTGCTACG...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGACACTCAGTCACAACTaGAATGAAGTGGGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLTLSHN*NEVGVH
Trigger: GTGAACCCCCACTTCATTGCAGTTGTGACTGAGTGT...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGATTCCTGGTCAGCAGCTaGTTGGGGATGCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRFLVSS*LGMLQI
Trigger: GATCTGGAGCATCCCCAAGCAGCTGCTGACCAGGAA...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTCTGGAGGACGGTCCCTaGTCGGGGGTCAATAACCCG +
Preference number: 4 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSLEDGP*SGVNNP
Trigger: CGGGTTATTGACCCCCGAGCAGGGACCGTCCTCCAG...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGACCACCACGTAGAGCATaGTGGTGTCCGCGTCATAGA +
Preference number: 4 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRPPRRA*WCPRHR
Trigger: TCTATGACGCGGACACCAGCATGCTCTACGTGGTGG...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCTTCAAGCAATTCTCCTaGCTCAGCCTCCCAAGTCGC +
Preference number: 4 (lower is better)
Translates to: KAGSQPSPAMKQISLASLFKQFS*LSLPSR
Trigger: GCGACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAA...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCTTGCCCAGGTTAGAGTaGAGTGGCACAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFLPRLE*SGTISA
Trigger: AGCTGAGATTGTGCCACTGCACTCTAACCTGGGCAA...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTAGAGAGGGCAGGACTTaGAAGAGGTCACTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGREGRT*KRSLSK
Trigger: CTTACTCAGTGACCTCTTGCAAGTCCTGCCCTCTCT...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCATTCTCTGTCTTTGGTaGGGGGCATTCGAAAACGTC +
Preference number: 4 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVILCLW*GAFENV
Trigger: GACGTTTTCGAATGCCCCCCACCAAAGACAGAGAAT...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCGGCACCATGTCCCACTaGAATCTCTTTCAGCGATGG +
Preference number: 4 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLAGTMSH*NLFQRW
Trigger: CCATCGCTGAAAGAGATTCCAGTGGGACATGGTGCC...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCCAGATTTCTACTCTTTaGGCTGAGAACTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSQISTL*AENCIR
Trigger: TCTGATGCAGTTCTCAGCCCAAAGAGTAGAAATCTG...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGTTTGGCCTTCTTTTCTaGAGCACACTAAGGCAATCT +
Preference number: 4 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGFGLLF*STLRQS
Trigger: AGATTGCCTTAGTGTGCTCCAGAAAAGAAGGCCAAA...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATACAATGCCTGGGATTTaGCCTTCTTTTCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHTMPGI*PSFLEH
Trigger: GTGCTCCAGAAAAGAAGGCCAAATCCCAGGCATTGT...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGTGCCCTGACAATGCCTaGGATTTGGCCTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLCPDNA*DLAFFS
Trigger: AGAAAAGAAGGCCAAATCCCAGGCATTGTCAGGGCA...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATTGCCCTGACAATGCCTaGGATTTGGCCTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHCPDNA*DLAFFS
Trigger: AGAAAAGAAGGCCAAATCCCAGGCATTGTCAGGGCA...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGTGGGGTGGAGGGAGCTaGCCAAGGAATGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWWGGGS*PRNGIV
Trigger: CACAATGCCATTCCTTGGCCAGCTCCCTCCACCCCA...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTCTGGGTCCCTTGGGGTaGAGGGAGCTGGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSLGPLG*RELAKE
Trigger: TTCCTTGGCCAGCTCCCTCCACCCCAAGGGACCCAG...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGAGCATGCTCTGCCAACTaGCTGGGACCTGAATGTGCT +
Preference number: 4 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRACSAN*LGPECA
Trigger: AGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CAA 72 bp TCAAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTaGTTCCAGGGTACCCCTGGTTCAGATGAAGAAACT +
Preference number: 4 (lower is better)
Translates to: SRFQVADPAESS*FQGTPGSDEET
Trigger: AGTTTCTTCATCTGAACCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCTGTGTTCTTTCCTCTTaGGAAGTTACAGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSCVLSS*EVTAHH
Trigger: ATGATGAGCTGTAACTTCTCAAGAGGAAAGAACACA...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCTTCTACTCTTTGGGCTaGGAACTGCATCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAFYSLG*ELHQTQ
Trigger: TTGGGTCTGATGCAGTTCTCAGCCCAAAGAGTAGAA...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTTGGAAAGGTTGGTTTTaGCCACCTGCCTGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGWKGWF*PPACVV
Trigger: TACAACACAGGCAGGTGGTCAAAACCAACCTTTCCA...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCAACAGCATGTGTCACTaGGTGGAGGTGGGAGGAATT +
Preference number: 4 (lower is better)
Translates to: KAGSQPSPAMKQISLASLNSMCH*VEVGGI
Trigger: AATTCCTCCCACCTCCACTCAGTGACACATGCTGTT...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGTTGGTTTTGACCACCTaGCTGTGTTGTAGAATTGGG +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLLVLTT*LCCRIG
Trigger: CCCAATTCTACAACACAGGCAGGTGGTCAAAACCAA...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATTTGGTTTTGACCACCTaGCTGTGTTGTAGAATTGGG +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHLVLTT*LCCRIG
Trigger: CCCAATTCTACAACACAGGCAGGTGGTCAAAACCAA...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGAACCCCCATCGTGCTaGAGCTGCGGTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSEPPSC*SCGSQR
Trigger: TCTCTGGGAACCGCAGCTGCAGCACGATGGGGGTTC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGCCTGTAGAGCTCTGCTaGCCTGACAATGCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWPVELC*PDNAWD
Trigger: ATCCCAGGCATTGTCAGGGCAGCAGAGCTCTACAGG...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCAGCAGTTCTCCTTGCTaGCTGGTTTGCCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFSSSPC*LVCQRH
Trigger: ATGTCTTTGGCAAACCAGCCAGCAAGGAGAACTGCT...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGGTGCCCGCAGACTTTTaGGTAGTGGGGGTCCAACTT +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWVPADF*VVGVQL
Trigger: AAGTTGGACCCCCACTACCCAAAAGTCTGCGGGCAC...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGGAAACAGCACTTTGCTaGCCCGGTGCCCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWETALC*PGALCS
Trigger: GCTACAAAGGGCACCGGGCCAGCAAAGTGCTGTTTC...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGCCACGTAGAGCATGCTaGTGTCCGCGTCATAGAAGG +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWPRRAC*CPRHRR
Trigger: CCTTCTATGACGCGGACACCAGCATGCTCTACGTGG...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGAACCGATCCCCTTCTGTaGGTTATAGGAGCGGTACTC +
Preference number: 4 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRTDPLL*VIGAVL
Trigger: GAGTACCGCTCCTATAACCCACAGAAGGGGATCGGT...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGAAATCGCCCTGTGCAATaGAGATCATCTGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRNRPVQ*RSSAPP
Trigger: AGGAGGGGCAGATGATCTCCATTGCACAGGGCGATT...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCGTCTGGAATGTGGCATaGGCATCTGTATTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFVWNVA*ASVFPA
Trigger: TGCAGGAAATACAGATGCCCATGCCACATTCCAGAC...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTACTGCAGATCACCTGTaGAGCTTATATGACCATACA +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGTADHL*SLYDHT
Trigger: TGTATGGTCATATAAGCTCCACAGGTGATCTGCAGT...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCACACTAAGGCAATCTTaGCTAGTGCATCAGACGGGA +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDATLRQS*LVHQTG
Trigger: TCCCGTCTGATGCACTAGCCAAGATTGCCTTAGTGT...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGGTCACTGAGTGGAGGTaGGAGGAATTTGTAAACTGT +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLVTEWR*EEFVNC
Trigger: ACAGTTTACAAATTCCTCCCACCTCCACTCAGTGAC...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CAA 72 bp ATAGAAATAGTGGTTGTCCTTGAGGGGACTTGTGGTTaGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: IEIVVVLEGTCG*VLNLPMEPSGV
Trigger: GACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGTCCCCTCAAGGACAACCACTATTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CAA 72 bp TTGGTTTTGACCACCTGCCTGTGTTGTAGAATTGGGTaGAATGCCTCTGACCCCTTGCCAGTGTCCGTTAGT +
Preference number: 4 (lower is better)
Translates to: LVLTTCLCCRIG*NASDPLPVSVS
Trigger: ACTAACGGACACTGGCAAGGGGTCAGAGGCATTCAACCCAATTCTACAACACAGGCAGGTGGTCAAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTAGGATCACATCTTGGTaGCAGCTAATCGTACTCATG +
Preference number: 4 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGRITSW*QLIVLM
Trigger: CATGAGTACGATTAGCTGTCACCAAGATGTGATCCT...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGTGCTCAGAGCTGCTCTaGGCCCATCCGCAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWCSELL*AHPQVF
Trigger: AAAAACTTGCGGATGGGCTCAGAGCAGCTCTGAGCA...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCAATAGTGGTTGTCCTTaGGGGGACTTGTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: KAGSQPSPAMKQISLASLNSGCP*GDLWFG
Trigger: ACCAAACCACAAGTCCCCTCAAGGACAACCACTATT...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCTGGAAAGGTTGGTTTTaGCCACCTGCCTGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: KAGSQPSPAMKQISLASLWKGWF*PPACVV
Trigger: TACAACACAGGCAGGTGGTCAAAACCAACCTTTCCA...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCCTATCCATATCAGGCTaGTTCTGGTTGGAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFLSISG*FWLERL
Trigger: CAACCTTTCCAACCAGAATCAGCCTGATATGGATAG...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCACACTCAGTCACAACTaGAATGAAGTGGGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLATLSHN*NEVGVH
Trigger: GTGAACCCCCACTTCATTGCAGTTGTGACTGAGTGT...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGATTGCCCAGGTTAGAGTaGAGTGGCACAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRLPRLE*SGTISA
Trigger: AGCTGAGATTGTGCCACTGCACTCTAACCTGGGCAA...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTGAAACAAATATCACTTaGCTCTCTCTAGGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGETNIT*LSLGLS
Trigger: ACTAAGGCCTAGAGAGAGGCAAGTGATATTTGTTTC...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGAATGCCTCTGACCCCTTaGCAGTGTCCGTTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRMPLTP*QCPLVS
Trigger: AGAAACTAACGGACACTGGCAAGGGGTCAGAGGCAT...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGGCAATGGAGATCATCTaGCCCTCCTTGGTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWAMEII*PSLVRR
Trigger: CCTCCTTACCAAGGAGGGGCAGATGATCTCCATTGC...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCGTTAAGGTGGATACCTaGCAAAGCTCATCTCCTAGT +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAVKVDT*QSSSPS
Trigger: ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAAC...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCAGCAGTTCTCCTTGCTaGCTGGTTTGCCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: KAGSQPSPAMKQISLASLSSSPC*LVCQRH
Trigger: ATGTCTTTGGCAAACCAGCCAGCAAGGAGAACTGCT...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGAAGGGACACCAGGATTaGGTCTCGATTCATCCCGCT +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWKGHQD*VSIHPA
Trigger: AGCGGGATGAATCGAGACCCAATCCTGGTGTCCCTT...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTCATTCCCAGTCTCTTaGTGGACTATTGTATTGACC +
Preference number: 4 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVSFPVS*WTIVLT
Trigger: GGTCAATACAATAGTCCACCAAGAGACTGGGAATGA...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCCTAATGTACACAGCTTaGGTTGAAACCTACCAGACT +
Preference number: 4 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVLMYTA*VETYQT
Trigger: AGTCTGGTAGGTTTCAACCCAAGCTGTGTACATTAG...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCGTCTGGAATGTGGCATaGGCATCTGTATTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLAVWNVA*ASVFPA
Trigger: TGCAGGAAATACAGATGCCCATGCCACATTCCAGAC...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGAAGAATAAACCACAGCTaGGTAAGGGGCAAACAGGGG +
Preference number: 4 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRRINHS*VRGKQG
Trigger: CCCCTGTTTGCCCCTTACCCAGCTGTGGTTTATTCT...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGTTTGGCCTTCTTTTCTaGAGCACACTAAGGCAATCT +
Preference number: 4 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLFGLLF*STLRQS
Trigger: AGATTGCCTTAGTGTGCTCCAGAAAAGAAGGCCAAA...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCGCATGTGTCACTGAGTaGAGGTGGGAGGAATTTGTA +
Preference number: 4 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLAACVTE*RWEEFV
Trigger: TACAAATTCCTCCCACCTCCACTCAGTGACACATGC...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCGCATGTGTCACTGAGTaGAGGTGGGAGGAATTTGTA +
Preference number: 4 (lower is better)
Translates to: KAGSQPSPAMKQISLASLACVTE*RWEEFV
Trigger: TACAAATTCCTCCCACCTCCACTCAGTGACACATGC...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATATTGTAGCGTTAAGGTaGATACCTGCCAAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: ACSANWLGPECARQVPLHIVALR*IPAKAH
Trigger: ATGAGCTTTGGCAGGTATCCACCTTAACGCTACAAT...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CAA 72 bp CTGTGTTGTAGAATTGGGTTGAATGCCTCTGACCCCTaGCCAGTGTCCGTTAGTTTCTGTAGCAAACCCAGA +
Preference number: 4 (lower is better)
Translates to: LCCRIGLNASDP*PVSVSFCSKPR
Trigger: TCTGGGTTTGCTACAGAAACTAACGGACACTGGCAAGGGGTCAGAGGCATTCAACCCAATTCTACAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCCCATCCGCAAGTTTTTaGTCTCCAGTTCCAACTGTT +
Preference number: 4 (lower is better)
Translates to: KAGSQPSPAMKQISLASLPSASF*SPVPTV
Trigger: AACAGTTGGAACTGGAGATCAAAAACTTGCGGATGG...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTTGGCCAGGCTGGTCTTaGACTCCTGACCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSWPGWS*TPDLRR
Trigger: TCTTCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCA...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGATTCTACTCTTTGGGCTaGGAACTGCATCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRFYSLG*ELHQTQ
Trigger: TTGGGTCTGATGCAGTTCTCAGCCCAAAGAGTAGAA...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGCCTGTGGAGCTTATATaGCCATACAGGCCCTACTCT +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWPVELI*PYRPYS
Trigger: AGAGTAGGGCCTGTATGGTCATATAAGCTCCACAGG...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCTCAATGACCTTGGCATaGTGTTTCTTCACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFSMTLA*CFFTSL
Trigger: CAGAGAAGTGAAGAAACATCATGCCAAGGTCATTGA...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCTCAATGACCTTGGCATaGTGTTTCTTCACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PSAVLILRKFLSQQKGDASMTLA*CFFTSL
Trigger: CAGAGAAGTGAAGAAACATCATGCCAAGGTCATTGA...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGATTCTCAGAAAGTTCCTaGGTCAACAGAAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRFSESS*VNRKGT
Trigger: CGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAA...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGTGTTCCATCGGGATGTaGCTGTGGACATCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWCSIGM*LWTSAS
Trigger: AGAAGCTGATGTCCACAGGCACATCCCGATGGAACA...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGAAATCTAATCGCCCTGTaGAATGGAGATCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRNLIAL*NGDHLP
Trigger: GGGCAGATGATCTCCATTGCACAGGGCGATTAGATT...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCTTCCCAGTCTCTTGGTaGACTATTGTATTGACCACT +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFFPVSW*TIVLTT
Trigger: AGTGGTCAATACAATAGTCCACCAAGAGACTGGGAA...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCCTAATGTACACAGCTTaGGTTGAAACCTACCAGACT +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFLMYTA*VETYQT
Trigger: AGTCTGGTAGGTTTCAACCCAAGCTGTGTACATTAG...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGCAGCTTCAGTTGGTCTaGAATGTGGCATGGGCATCT +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWQLQLV*NVAWAS
Trigger: AGATGCCCATGCCACATTCCAGACCAACTGAAGCTG...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCACTGCAGATCACCTGTaGAGCTTATATGACCATACA +
Preference number: 4 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFTADHL*SLYDHT
Trigger: TGTATGGTCATATAAGCTCCACAGGTGATCTGCAGT...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGTCCCAGCTCCTGTCTaGAGCTTGCTGTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSVPAPV*SLLSSS
Trigger: TGAAGAGGACAGCAAGCTCCAGACAGGAGCTGGGAC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGATCCCCAGCTGTAAAATaGGGAACTTGGGTCAAATCA +
Preference number: 4 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRSPAVK*GTWVKS
Trigger: TGATTTGACCCAAGTTCCTCATTTTACAGCTGGGGA...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGGAGACACAGCCTTCCTaGTTAGTCTTCCCCTATTCT +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWETQPS*LVFPYS
Trigger: AGAATAGGGGAAGACTAAGCAGGAAGGCTGTGTCTC...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGTCGAGTCCTCTCTTTaGCATGACACCGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSVESSL*HDTDPL
Trigger: AAGGGGATCGGTGTCATGCCAAAGAGAGGACTCGAC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGATTCTCTGTCTTTGGTaGGGGGCATTCGAAAACGTC +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWILCLW*GAFENV
Trigger: GACGTTTTCGAATGCCCCCCACCAAAGACAGAGAAT...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCAATCTCTTTCAGCGATaGAGAGTTTTGTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVNLFQR*RVLFSG
Trigger: ACCAGAAAACAAAACTCTCCATCGCTGAAAGAGATT...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCTCATTCCCAGTCTCTTaGTGGACTATTGTATTGACC +
Preference number: 4 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLASFPVS*WTIVLT
Trigger: GGTCAATACAATAGTCCACCAAGAGACTGGGAATGA...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGAGCTGGCCAAGGAATaGCATTGTGCAGAGGCATAC +
Preference number: 4 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSELAKE*HCAEAY
Trigger: GTATGCCTCTGCACAATGCCATTCCTTGGCCAGCTC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCTGTGTTCTTTCCTCTTaGGAAGTTACAGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLACVLSS*EVTAHH
Trigger: ATGATGAGCTGTAACTTCTCAAGAGGAAAGAACACA...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGTCCCCAGCTGTAAAATaGGGAACTTGGGTCAAATCA +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWSPAVK*GTWVKS
Trigger: TGATTTGACCCAAGTTCCTCATTTTACAGCTGGGGA...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGCTATCCATATCAGGCTaGTTCTGGTTGGAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWLSISG*FWLERL
Trigger: CAACCTTTCCAACCAGAATCAGCCTGATATGGATAG...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGATCTCAGCCCAGCCCTaGCATGAAACAAATATCACT +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWISAQP*HETNIT
Trigger: AGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGAT...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGTTCTCCTTGCTGGCTaGTTTGCCAAAGACATGACG +
Preference number: 4 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSVLLAG*FAKDMT
Trigger: CGTCATGTCTTTGGCAAACCAGCCAGCAAGGAGAAC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTACAACTGCAATGAAGTaGGGGTTCACGGCACAGAAG +
Preference number: 4 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSTTAMK*GFTAQK
Trigger: CTTCTGTGCCGTGAACCCCCACTTCATTGCAGTTGT...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGGGGTTTCACCATGTTaGCCAGGCTGGTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSGVSPC*PGWFLS
Trigger: AGAAAGAAACCAGCCTGGCCAACATGGTGAAACCCC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CAA 72 bp GCTCCTGTCTGGAGCTTGCTGTCCTCTTCATCTTTATaGCAAATAGGTACACATGCAGTCTTCCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: APVWSLLSSSSL*QIGTHAVFHLH
Trigger: GTGAAGATGGAAGACTGCATGTGTACCTATTTGCAATAAAGATGAAGAGGACAGCAAGCTCCAGACAGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGAGACACAGCCTTCCTaGTTAGTCTTCCCCTATTCT +
Preference number: 4 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSETQPS*LVFPYS
Trigger: AGAATAGGGGAAGACTAAGCAGGAAGGCTGTGTCTC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTCCATCCGCAAGTTTTTaGTCTCCAGTTCCAACTGTT +
Preference number: 4 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSPSASF*SPVPTV
Trigger: AACAGTTGGAACTGGAGATCAAAAACTTGCGGATGG...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR TCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGGGTGGACTATTGTATTaGCCACTGAACTTTAGAGTA +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWGGLLY*PLNFRV
Trigger: TACTCTAAAGTTCAGTGGTCAATACAATAGTCCACC...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR GCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGGAGGCCAGACTGATTaGCCTTCTCAAATTTCAAGT +
Preference number: 4 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSGGQTD*PSQISS
Trigger: ACTTGAAATTTGAGAAGGGCAATCAGTCTGGCCTCC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS-3UTR GCA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGGAAACAAATATCACTTaGCTCTCTCTAGGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWETNIT*LSLGLS
Trigger: ACTAAGGCCTAGAGAGAGGCAAGTGATATTTGTTTC...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
3UTR CAA 72 bp CCTTCCAGCTCTAGTTTTCTACTGTGTTCTTTCCTCTaGAGAAGTTACAGCTCATCATGGGCCCTTAATAAC +
Preference number: 4 (lower is better)
Translates to: PSSSSFLLCSFL*RSYSSSWALNN
Trigger: GTTATTAAGGGCCCATGATGAGCTGTAACTTCTCAAGAGGAAAGAACACAGTAGAAAACTAGAGCTGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CCA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTTTCCCAGTCTCTTGGTaGACTATTGTATTGACCACT +
Preference number: 4 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSFPVSW*TIVLTT
Trigger: AGTGGTCAATACAATAGTCCACCAAGAGACTGGGAA...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CCA 90 bp AGGGACACCAGGATTGGGTCTCGATTCATCCCGCTGAGCCACTCCTaGGCCGTCAGGGAGGGCTGGGCCCCTGCTGTTGGAGGGTATATG +
Preference number: 5 (lower is better)
Translates to: RDTRIGSRFIPLSHS*AVREGWAPAVGGYM
Trigger: CATATACCCTCCAACAGCAGGGGCCCAGCCCTCCCTGACGGCCCAGGAGTGGCTCAGCGGGATGAATCGAGACCCAATCCTGGTGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS GCA 90 bp TGCCTGTGGACATCAGCTTCTTCAGGTTCCCCAGAAACAGCACTTTaGTGGCCCGGTGCCCTTTGTAGCTGGCCTCCTGGAGGACGGTCC +
Preference number: 5 (lower is better)
Translates to: CLWTSASSGSPETAL*WPGALCSWPPGGRS
Trigger: GGACCGTCCTCCAGGAGGCCAGCTACAAAGGGCACCGGGCCAGCAAAGTGCTGTTTCTGGGGAACCTGAAGAAGCTGATGTCCACAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CCA 90 bp CTGTGGACATCAGCTTCTTCAGGTTCCCCAGAAACAGCACTTTGCTaGCCCGGTGCCCTTTGTAGCTGGCCTCCTGGAGGACGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: LWTSASSGSPETALC*PGALCSWPPGGRSL
Trigger: CAGGGACCGTCCTCCAGGAGGCCAGCTACAAAGGGCACCGGGCCAGCAAAGTGCTGTTTCTGGGGAACCTGAAGAAGCTGATGTCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp GACACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAAGGCCACCTGCCGGTaGTTCCATCGGGATGTGCCT +
Preference number: 5 (lower is better)
Translates to: DTCVLFVKCAVWVPWGGGKATCR*FHRDVP
Trigger: AGGCACATCCCGATGGAACAACCGGCAGGTGGCCTT...CCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGGTGTACCTGAGGGCCTaGGTGGTGGCAGTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWVYLRA*VVAVSS
Trigger: ACTGCTGACTGCCACCACCAAGGCCCTCAGGTACAC...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CCA 90 bp CTCTGCTCACCCTTAATCAGTTCCCCAGGCAGAGTCTGCAACAGCTaGCAGGAGAGGATGGTGAGGTACCTCCTCTCTGCTTCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LCSPLISSPGRVCNS*QERMVRYLLSASSL
Trigger: GAGGCTGGAAGCAGAGAGGAGGTACCTCACCATCCTCTCCTGCCAGCTGTTGCAGACTCTGCCTGGGGAACTGATTAAGGGTGAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS CCA 90 bp GGTCCCACAAGGCCACCTGCCGGTTGTTCCATCGGGATGTGCCTGTaGACATCAGCTTCTTCAGGTTCCCCAGAAACAGCACTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: GPTRPPAGCSIGMCL*TSASSGSPETALCW
Trigger: CCAGCAAAGTGCTGTTTCTGGGGAACCTGAAGAAGCTGATGTCCACAGGCACATCCCGATGGAACAACCGGCAGGTGGCCTTGTGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CCA 90 bp GAGCCCATCCGCAAGTTTTTGATCTCCAGTTCCAACTGTTTGGCCTaGACCTCTCGCTGGGTCAACAGCTCCCGGAGCCTTCGGATCTCC +
Preference number: 5 (lower is better)
Translates to: EPIRKFLISSSNCLA*TSRWVNSSRSLRIS
Trigger: GGAGATCCGAAGGCTCCGGGAGCTGTTGACCCAGCGAGAGGTCCAGGCCAAACAGTTGGAACTGGAGATCAAAAACTTGCGGATGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCCGAATCTTGCGGTCTTaGCAGGTGGTGGCCAACAGG +
Preference number: 5 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSRILRS*QVVANR
Trigger: CCTGTTGGCCACCACCTGCAAAGACCGCAAGATTCG...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CCA 90 bp AAGTTTTTGATCTCCAGTTCCAACTGTTTGGCCTGGACCTCTCGCTaGGTCAACAGCTCCCGGAGCCTTCGGATCTCCTCCTGTTGCCGG +
Preference number: 5 (lower is better)
Translates to: KFLISSSNCLAWTSR*VNSSRSLRISSCCR
Trigger: CCGGCAACAGGAGGAGATCCGAAGGCTCCGGGAGCTGTTGACCCAGCGAGAGGTCCAGGCCAAACAGTTGGAACTGGAGATCAAAAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGAGGCTGCCGTTGGTGTaGAAGGACATGGAGAGGATC +
Preference number: 5 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWRLPLV*KDMERI
Trigger: GATCCTCTCCATGTCCTTCAACACCAACGGCAGCCT...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp CAGTCCCCACCTCAGCTCCAGAATCTAATCGCCCTGTGCAATGGAGATCATCTGAAGGCCACCTGCCGGTaGTTCCATCGGGATGTGCCT +
Preference number: 5 (lower is better)
Translates to: QSPPQLQNLIALCNGDHLKATCR*FHRDVP
Trigger: AGGCACATCCCGATGGAACAACCGGCAGGTGGCCTT...CAGATGATCTCCATTGCACAGGGCGATTAGATTCTGGAGCTGAGGTGGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGCGGGGTTTCACCATGTaGGCCAGGCTGGTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWRGFTM*ARLVSF
Trigger: GAAAGAAACCAGCCTGGCCAACATGGTGAAACCCCG...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCGTGTACCTGAGGGCCTaGGTGGTGGCAGTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVVYLRA*VVAVSS
Trigger: ACTGCTGACTGCCACCACCAAGGCCCTCAGGTACAC...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCATGTTGAGGGAGGGCTaGGGGCAACACTTCTGGACT +
Preference number: 5 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSMLREG*GQHFWT
Trigger: AGTCCAGAAGTGTTGCCCCAAGCCCTCCCTCAACAT...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS GCA 90 bp AGTCTGCAACAGCTGGCAGGAGAGGATGGTGAGGTACCTCCTCTCTaGTTCCAGCCTCCAGGAGCTCCACCTAAATTGTTTGTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SLQQLAGEDGEVPPL*FQPPGAPPKLFVQA
Trigger: AGCCTGGACAAACAATTTAGGTGGAGCTCCTGGAGGCTGGAAGCAGAGAGGAGGTACCTCACCATCCTCTCCTGCCAGCTGTTGCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS GCA 90 bp TATCCTGGTCCCACAAGGCCACCTGCCGGTTGTTCCATCGGGATGTaGCTGTGGACATCAGCTTCTTCAGGTTCCCCAGAAACAGCACTT +
Preference number: 5 (lower is better)
Translates to: YPGPTRPPAGCSIGM*LWTSASSGSPETAL
Trigger: AAGTGCTGTTTCTGGGGAACCTGAAGAAGCTGATGTCCACAGGCACATCCCGATGGAACAACCGGCAGGTGGCCTTGTGGGACCAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS GCA 90 bp GCCATTTGTCAGCCAGGTTTTCTTCTCCTCCAGCCTGTGTTCTGCTaGCCACCTTGGCATCTTCTCCTCCAACAGGGAGGAAGACCTCCA +
Preference number: 5 (lower is better)
Translates to: AICQPGFLLLQPVFC*PPWHLLLQQGGRPP
Trigger: TGGAGGTCTTCCTCCCTGTTGGAGGAGAAGATGCCAAGGTGGGCAGCAGAACACAGGCTGGAGGAGAAGAAAACCTGGCTGACAAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTGTGCCCGCAGACTTTaGGGTAGTGGGGGTCCAACT +
Preference number: 5 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVCARRL*GSGGPT
Trigger: AGTTGGACCCCCACTACCCAAAAGTCTGCGGGCACA...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCCGAATCTTGCGGTCTTaGCAGGTGGTGGCCAACAGG +
Preference number: 5 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVRILRS*QVVANR
Trigger: CCTGTTGGCCACCACCTGCAAAGACCGCAAGATTCG...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATTCCAGTTCCAACTGTTaGGCCTGGACCTCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: ACSANWLGPECARQVPLHSSSNC*AWTSRW
Trigger: CCAGCGAGAGGTCCAGGCCAAACAGTTGGAACTGGA...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS GCA 90 bp GATAAATGCCTCTGCTCACCCTTAATCAGTTCCCCAGGCAGAGTCTaGAACAGCTGGCAGGAGAGGATGGTGAGGTACCTCCTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: DKCLCSPLISSPGRV*NSWQERMVRYLLSA
Trigger: AGCAGAGAGGAGGTACCTCACCATCCTCTCCTGCCAGCTGTTGCAGACTCTGCCTGGGGAACTGATTAAGGGTGAGCAGAGGCATTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS-3UTR CAA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCCTGGTCAGCAGCTGCTaGGGGATGCTCCAGATCTTA +
Preference number: 5 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVLVSSC*GMLQIL
Trigger: TAAGATCTGGAGCATCCCCAAGCAGCTGCTGACCAG...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATTCGGATCTCCTCCTGTaGCCGGTAGAACATCTGCAG +
Preference number: 5 (lower is better)
Translates to: ACSANWLGPECARQVPLHSDLLL*PVEHLQ
Trigger: CTGCAGATGTTCTACCGGCAACAGGAGGAGATCCGA...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCTCCAGTTCCAACTGTTaGGCCTGGACCTCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFSSSNC*AWTSRW
Trigger: CCAGCGAGAGGTCCAGGCCAAACAGTTGGAACTGGA...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTCACACTAAGGCAATCTaGGCTAGTGCATCAGACGGG +
Preference number: 5 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGHTKAI*ASASDG
Trigger: CCCGTCTGATGCACTAGCCAAGATTGCCTTAGTGTG...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGACACCTGTGTCCTGTTaGTTAAGTGTGCAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWTPVSC*LSVQSG
Trigger: CCCAGACTGCACACTTAACAAACAGGACACAGGTGT...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTGGAGCTCCACCTAAATaGTTTGTCCAGGCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGGAPPK*FVQAGP
Trigger: AGGCCCAGCCTGGACAAACAATTTAGGTGGAGCTCC...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS-3UTR CAA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCGCTGGGCCCCTGCTGTaGGAGGGTATATGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: KAGSQPSPAMKQISLASLAGPLL*EGICPL
Trigger: AAGAGGACATATACCCTCCAACAGCAGGGGCCCAGC...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCGCTGGGCCCCTGCTGTaGGAGGGTATATGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLAAGPLL*EGICPL
Trigger: AAGAGGACATATACCCTCCAACAGCAGGGGCCCAGC...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTGTTCTGCTGCCCACCTaGGCATCTTCTCCTCCAACA +
Preference number: 5 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGVLLPT*ASSPPT
Trigger: TGTTGGAGGAGAAGATGCCAAGGTGGGCAGCAGAAC...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCTCGGATCTCCTCCTGTaGCCGGTAGAACATCTGCAG +
Preference number: 5 (lower is better)
Translates to: PSAVLILRKFLSQQKGDASDLLL*PVEHLQ
Trigger: CTGCAGATGTTCTACCGGCAACAGGAGGAGATCCGA...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp ACCTGTGTCCTGTTTGTTAAGTGTGCAGTCTGGGTCCCTTGGGGTGGAGGGAGCCCCATCCGCAAGTTTTaGATCTCCAGTTCCAACTGT +
Preference number: 5 (lower is better)
Translates to: TCVLFVKCAVWVPWGGGSPIRKF*ISSSNC
Trigger: ACAGTTGGAACTGGAGATCAAAAACTTGCGGATGGG...GCTCCCTCCACCCCAAGGGACCCAGACTGCACACTTAACAAACAGGACACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATAAGGGAGCTGTCTGGTaGGAATACAGTGTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: ACSANWLGPECARQVPLHKGAVW*EYSVGK
Trigger: CTTCCCCACACTGTATTCCAACCAGACAGCTCCCTT...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGACCTGCAGAGAGCAGCTaGTTCCAGGGTACCCCTGGT +
Preference number: 5 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRPAESS*FQGTPG
Trigger: ACCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGG...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTGAGATTCAGCTTCAGTaGGTCTGGAATGTGGCATGG +
Preference number: 5 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGEIQLQ*VWNVAW
Trigger: CCATGCCACATTCCAGACCAACTGAAGCTGAATCTC...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTGCTCCTGTCTGGAGCTaGCTGTCCTCTTCATCTTTA +
Preference number: 5 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGAPVWS*LSSSSL
Trigger: TAAAGATGAAGAGGACAGCAAGCTCCAGACAGGAGC...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCATGTTGAGGGAGGGCTaGGGGCAACACTTCTGGACT +
Preference number: 5 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFMLREG*GQHFWT
Trigger: AGTCCAGAAGTGTTGCCCCAAGCCCTCCCTCAACAT...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTGACAATGCCTGGGATTaGGCCTTCTTTTCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGDNAWD*AFFSGA
Trigger: TGCTCCAGAAAAGAAGGCCAAATCCCAGGCATTGTC...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGATGTGCCCGCAGACTTTaGGGTAGTGGGGGTCCAACT +
Preference number: 5 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRCARRL*GSGGPT
Trigger: AGTTGGACCCCCACTACCCAAAAGTCTGCGGGCACA...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCAGGCTGCCGTTGGTGTaGAAGGACATGGAGAGGATC +
Preference number: 5 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLARLPLV*KDMERI
Trigger: GATCCTCTCCATGTCCTTCAACACCAACGGCAGCCT...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTCAATAACCCGAATCTaGCGGTCTTTGCAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVSITRI*RSLQVV
Trigger: CACCACCTGCAAAGACCGCAAGATTCGGGTTATTGA...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTGAGGGGACTTGTGGTTaGGTTCTAAACCTCCCCATG +
Preference number: 5 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGEGTCG*VLNLPM
Trigger: CATGGGGAGGTTTAGAACCAAACCACAAGTCCCCTC...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCCGGGGTTTCACCATGTaGGCCAGGCTGGTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: KAGSQPSPAMKQISLASLRGFTM*ARLVSF
Trigger: GAAAGAAACCAGCCTGGCCAACATGGTGAAACCCCG...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCAATGCCTCTGACCCCTaGCCAGTGTCCGTTAGTTTC +
Preference number: 5 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFNASDP*PVSVSF
Trigger: GAAACTAACGGACACTGGCAAGGGGTCAGAGGCATT...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATGAGATTCAGCTTCAGTaGGTCTGGAATGTGGCATGG +
Preference number: 5 (lower is better)
Translates to: ACSANWLGPECARQVPLHEIQLQ*VWNVAW
Trigger: CCATGCCACATTCCAGACCAACTGAAGCTGAATCTC...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATGGAGAGGATCACATCTaGGTGACAGCTAATCGTACT +
Preference number: 5 (lower is better)
Translates to: ACSANWLGPECARQVPLHGEDHI*VTANRT
Trigger: AGTACGATTAGCTGTCACCAAGATGTGATCCTCTCC...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCGCTGGGGCCATGGAATaGAAGATAGGTCTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLAAGAME*KIGLSA
Trigger: TGCAGAGAGACCTATCTTCAATTCCATGGCCCCAGC...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCGAGGGGACTTGTGGTTaGGTTCTAAACCTCCCCATG +
Preference number: 5 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLAEGTCG*VLNLPM
Trigger: CATGGGGAGGTTTAGAACCAAACCACAAGTCCCCTC...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAGGTTTCAGGTGGCAGATCCTGCAGAGAGCAGCTTGTTCCAGGGTACCCCTGGCTGTGTTCTTTCCTCTaGAGAAGTTACAGCTCATCA +
Preference number: 5 (lower is better)
Translates to: KVSGGRSCREQLVPGYPWLCSFL*RSYSSS
Trigger: TGATGAGCTGTAACTTCTCAAGAGGAAAGAACACAG...CCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCAATGCCTCTGACCCCTaGCCAGTGTCCGTTAGTTTC +
Preference number: 5 (lower is better)
Translates to: KAGSQPSPAMKQISLASLNASDP*PVSVSF
Trigger: GAAACTAACGGACACTGGCAAGGGGTCAGAGGCATT...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCACACCTGTGTCCTGTTaGTTAAGTGTGCAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: PSAVLILRKFLSQQKGDATPVSC*LSVQSG
Trigger: CCCAGACTGCACACTTAACAAACAGGACACAGGTGT...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp GCATGCTCTGCCAACTGGCTGGGACCTGAATGTGCTAGGCAAGTTCCACTACATTCAAAAGGGTTCCACTaGACATCCAAAACGTTGCCT +
Preference number: 5 (lower is better)
Translates to: ACSANWLGPECARQVPLHSKGFH*TSKTLP
Trigger: AGGCAACGTTTTGGATGTCAAGTGGAACCCTTTTGA...ATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTGGAGAGGATCACATCTaGGTGACAGCTAATCGTACT +
Preference number: 5 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGGEDHI*VTANRT
Trigger: AGTACGATTAGCTGTCACCAAGATGTGATCCTCTCC...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGAGCTGGGGCCATGGAATaGAAGATAGGTCTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRAGAME*KIGLSA
Trigger: TGCAGAGAGACCTATCTTCAATTCCATGGCCCCAGC...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGGTTCTGCTGCCCACCTaGGCATCTTCTCCTCCAACA +
Preference number: 5 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWVLLPT*ASSPPT
Trigger: TGTTGGAGGAGAAGATGCCAAGGTGGGCAGCAGAAC...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTCTGTGTTCTTTCCTCTaGAGAAGTTACAGCTCATCA +
Preference number: 5 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGLCSFL*RSYSSS
Trigger: TGATGAGCTGTAACTTCTCAAGAGGAAAGAACACAG...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp TCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCTTCTGTTGTAGAATTGGGTaGAATGCCTCTGACCCCTTG +
Preference number: 5 (lower is better)
Translates to: SGWNTVWGRETQPSCLVFCCRIG*NASDPL
Trigger: CAAGGGGTCAGAGGCATTCAACCCAATTCTACAACA...GAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp ACTTGTGGTTTGGTTCTAAACCTCCCCATGGAGCCGAGTGGTGTCCCTGAGGGTATCATTCCCAGTCTCTaGGTGGACTATTGTATTGAC +
Preference number: 5 (lower is better)
Translates to: TCGLVLNLPMEPSGVPEGIIPSL*VDYCID
Trigger: GTCAATACAATAGTCCACCAAGAGACTGGGAATGAT...ACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCGACAATGCCTGGGATTaGGCCTTCTTTTCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLADNAWD*AFFSGA
Trigger: TGCTCCAGAAAAGAAGGCCAAATCCCAGGCATTGTC...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAAGCAGGATCTCAGCCCAGCCCTGCCATGAAACAAATATCACTTGCCTCTCTCTGTTGTAGAATTGGGTaGAATGCCTCTGACCCCTTG +
Preference number: 5 (lower is better)
Translates to: KAGSQPSPAMKQISLASLCCRIG*NASDPL
Trigger: CAAGGGGTCAGAGGCATTCAACCCAATTCTACAACA...GAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGGGCTGAGATCCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGATTCTGGTTGGAAAGGTaGGTTTTGACCACCTGCCTG +
Preference number: 5 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRFWLER*VLTTCL
Trigger: CAGGCAGGTGGTCAAAACCAACCTTTCCAACCAGAA...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp CTGTCTGGTTGGAATACAGTGTGGGGAAGGGAGACACAGCCTTCCTGCTTAGTCATCATTCCCAGTCTCTaGGTGGACTATTGTATTGAC +
Preference number: 5 (lower is better)
Translates to: LSGWNTVWGRETQPSCLVIIPSL*VDYCID
Trigger: GTCAATACAATAGTCCACCAAGAGACTGGGAATGAT...GACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGCACACTAAGGCAATCTaGGCTAGTGCATCAGACGGG +
Preference number: 5 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWHTKAI*ASASDG
Trigger: CCCGTCTGATGCACTAGCCAAGATTGCCTTAGTGTG...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTCTGGTCAGCAGCTGCTaGGGGATGCTCCAGATCTTA +
Preference number: 5 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSLVSSC*GMLQIL
Trigger: TAAGATCTGGAGCATCCCCAAGCAGCTGCTGACCAG...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGTCAATAACCCGAATCTaGCGGTCTTTGCAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWSITRI*RSLQVV
Trigger: CACCACCTGCAAAGACCGCAAGATTCGGGTTATTGA...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp CCTAGTGCTGTCCTCATTCTCAGAAAGTTCCTGAGTCAACAGAAAGGGGACGCCAAACGTCAAAGCCATTaGTCAGCCAGGTTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: PSAVLILRKFLSQQKGDAKRQSH*SARFSS
Trigger: AGAAGAAAACCTGGCTGACAAATGGCTTTGACGTTT...GGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGATTGGAAAGGTTGGTTTaGACCACCTGCCTGTGTTGT +
Preference number: 5 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRLERLV*TTCLCC
Trigger: ACAACACAGGCAGGTGGTCAAAACCAACCTTTCCAA...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp GCATGTGTCACTGAGTGGAGGTGGGAGGAATTTGTAAACTGTGAAGTGCTAGCCAAACGTCAAAGCCATTaGTCAGCCAGGTTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: ACVTEWRWEEFVNCEVLAKRQSH*SARFSS
Trigger: AGAAGAAAACCTGGCTGACAAATGGCTTTGACGTTT...GGCTAGCACTTCACAGTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGTCAAAAGGGTTCCACTaGACATCCAAAACGTTGCCT +
Preference number: 5 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWSKGFH*TSKTLP
Trigger: AGGCAACGTTTTGGATGTCAAGTGGAACCCTTTTGA...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AACACGAGCATCCGGCCTGTGCAGACATACAAGCAGAATAAACCACAGCTGGGTTGTAAAATGAGGAACTaGGGTCAAATCACTAGCTTT +
Preference number: 5 (lower is better)
Translates to: NTSIRPVQTYKQNKPQLGCKMRN*GQITSF
Trigger: AAAGCTAGTGATTTGACCCAAGTTCCTCATTTTACA...ACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTGCTCCTGTCTGGAGCTaGCTGTCCTCTTCATCTTTA +
Preference number: 5 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSAPVWS*LSSSSL
Trigger: TAAAGATGAAGAGGACAGCAAGCTCCAGACAGGAGC...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAGCACAATTATTGTAGCGTTAAGGTGGATACCTGCCAAAGCTCATCTCCTAGTCCCATCCGCAAGTTTTaGATCTCCAGTTCCAACTGT +
Preference number: 5 (lower is better)
Translates to: KHNYCSVKVDTCQSSSPSPIRKF*ISSSNC
Trigger: ACAGTTGGAACTGGAGATCAAAAACTTGCGGATGGG...ACTAGGAGATGAGCTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp CAAGAAGGCAAACAGAAAAACGGCACCATGTCCCACTGGAATCTCTTTCAGCGATCCTCTTCATCTTTATaGCAAATAGGTACACATGCA +
Preference number: 5 (lower is better)
Translates to: QEGKQKNGTMSHWNLFQRSSSSL*QIGTHA
Trigger: TGCATGTGTACCTATTTGCAATAAAGATGAAGAGGA...TCGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGTGTAAAATGAGGAACTaGGGTCAAATCACTAGCTTT +
Preference number: 5 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWCKMRN*GQITSF
Trigger: AAAGCTAGTGATTTGACCCAAGTTCCTCATTTTACA...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS-3UTR CAA 90 bp AAGGAGGGACAAAGAAAAGCTTTCAGGCTAAAAGGGAACTTTGGGACCATCTGGTCCTCTTCATCTTTATaGCAAATAGGTACACATGCA +
Preference number: 5 (lower is better)
Translates to: KEGQRKAFRLKGNFGTIWSSSSL*QIGTHA
Trigger: TGCATGTGTACCTATTTGCAATAAAGATGAAGAGGA...CCAGATGGTCCCAAAGTTCCCTTTTAGCCTGAAAGCTTTTCTTTGTCCCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS GCA 72 bp TGGCGGCCGTGGGGTGCCACTCCACCAGGCCTACTCTaGGCGCGTGGCCCACGAGTTCCTTCCTGTAGGCCG +
Preference number: 6 (lower is better)
Translates to: WRPWGATPPGLL*ARGPRVPSCRP
Trigger: CGGCCTACAGGAAGGAACTCGTGGGCCACGCGCGCAGAGTAGGCCTGGTGGAGTGGCACCCCACGGCCGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS TCA 72 bp TGCGCGCGTGGCCCACGAGTTCCTTCCTGTAGGCCGTaGGGTTCCTGGTCAGCAGCTGCTTGGGGATGCTCC +
Preference number: 6 (lower is better)
Translates to: CARGPRVPSCRP*GSWSAAAWGCS
Trigger: GGAGCATCCCCAAGCAGCTGCTGACCAGGAACCTCACGGCCTACAGGAAGGAACTCGTGGGCCACGCGCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CCA 72 bp AGGATTGGGTCTCGATTCATCCCGCTGAGCCACTCCTaGGCCGTCAGGGAGGGCTGGGCCCCTGCTGTTGGA +
Preference number: 6 (lower is better)
Translates to: RIGSRFIPLSHS*AVREGWAPAVG
Trigger: TCCAACAGCAGGGGCCCAGCCCTCCCTGACGGCCCAGGAGTGGCTCAGCGGGATGAATCGAGACCCAATCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS GCA 72 bp GAGCCACTCCTGGGCCGTCAGGGAGGGCTGGGCCCCTaGTGTTGGAGGGTATATGTCCTCTTGGTAGGATTC +
Preference number: 6 (lower is better)
Translates to: EPLLGRQGGLGP*CWRVYVLLVGF
Trigger: GAATCCTACCAAGAGGACATATACCCTCCAACAGCAGGGGCCCAGCCCTCCCTGACGGCCCAGGAGTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CCA 72 bp ATCTCCAGTTCCAACTGTTTGGCCTGGACCTCTCGCTaGGTCAACAGCTCCCGGAGCCTTCGGATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: ISSSNCLAWTSR*VNSSRSLRISS
Trigger: GGAGGAGATCCGAAGGCTCCGGGAGCTGTTGACCCAGCGAGAGGTCCAGGCCAAACAGTTGGAACTGGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CCA 72 bp TCAGCTTCTTCAGGTTCCCCAGAAACAGCACTTTGCTaGCCCGGTGCCCTTTGTAGCTGGCCTCCTGGAGGA +
Preference number: 6 (lower is better)
Translates to: SASSGSPETALC*PGALCSWPPGG
Trigger: TCCTCCAGGAGGCCAGCTACAAAGGGCACCGGGCCAGCAAAGTGCTGTTTCTGGGGAACCTGAAGAAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CAA 72 bp GAGAGGTTATCCTGGTCCCACAAGGCCACCTGCCGGTaGTTCCATCGGGATGTGCCTGTGGACATCAGCTTC +
Preference number: 6 (lower is better)
Translates to: ERLSWSHKATCR*FHRDVPVDISF
Trigger: GAAGCTGATGTCCACAGGCACATCCCGATGGAACAACCGGCAGGTGGCCTTGTGGGACCAGGATAACCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CAA 90 bp AGAGGCACAGAGAGGTTATCCTGGTCCCACAAGGCCACCTGCCGGTaGTTCCATCGGGATGTGCCTGTGGACATCAGCTTCTTCAGGTTC +
Preference number: 6 (lower is better)
Translates to: RGTERLSWSHKATCR*FHRDVPVDISFFRF
Trigger: GAACCTGAAGAAGCTGATGTCCACAGGCACATCCCGATGGAACAACCGGCAGGTGGCCTTGTGGGACCAGGATAACCTCTCTGTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CAA 90 bp CTCTCGCTGGGTCAACAGCTCCCGGAGCCTTCGGATCTCCTCCTGTaGCCGGTAGAACATCTGCAGCAACTCATTCTCTGTCTTTGGTGG +
Preference number: 6 (lower is better)
Translates to: LSLGQQLPEPSDLLL*PVEHLQQLILCLWW
Trigger: CCACCAAAGACAGAGAATGAGTTGCTGCAGATGTTCTACCGGCAACAGGAGGAGATCCGAAGGCTCCGGGAGCTGTTGACCCAGCGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CAA 90 bp GCAGAGGTCTCTGCTCAGAGCTGCTCTGAGCCCATCCGCAAGTTTTaGATCTCCAGTTCCAACTGTTTGGCCTGGACCTCTCGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: AEVSAQSCSEPIRKF*ISSSNCLAWTSRWV
Trigger: GACCCAGCGAGAGGTCCAGGCCAAACAGTTGGAACTGGAGATCAAAAACTTGCGGATGGGCTCAGAGCAGCTCTGAGCAGAGACCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS GCA 72 bp ACATCAGCTTCTTCAGGTTCCCCAGAAACAGCACTTTaGTGGCCCGGTGCCCTTTGTAGCTGGCCTCCTGGA +
Preference number: 6 (lower is better)
Translates to: TSASSGSPETAL*WPGALCSWPPG
Trigger: TCCAGGAGGCCAGCTACAAAGGGCACCGGGCCAGCAAAGTGCTGTTTCTGGGGAACCTGAAGAAGCTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CCA 72 bp CCCTTAATCAGTTCCCCAGGCAGAGTCTGCAACAGCTaGCAGGAGAGGATGGTGAGGTACCTCCTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: PLISSPGRVCNS*QERMVRYLLSA
Trigger: AGCAGAGAGGAGGTACCTCACCATCCTCTCCTGCCAGCTGTTGCAGACTCTGCCTGGGGAACTGATTAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS CCA 72 bp CCTTGCTGGCTGGTTTGCCAAAGACATGACGGAACTTaGAGCTCCGGTACTGGGGGTGCCATGACATCTGCT +
Preference number: 6 (lower is better)
Translates to: PCWLVCQRHDGT*SSGTGGAMTSA
Trigger: AGCAGATGTCATGGCACCCCCAGTACCGGAGCTCCAAGTTCCGTCATGTCTTTGGCAAACCAGCCAGCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343933.9
CDS CCA 72 bp CGCAAGTTTTTGATCTCCAGTTCCAACTGTTTGGCCTaGACCTCTCGCTGGGTCAACAGCTCCCGGAGCCTT +
Preference number: 6 (lower is better)
Translates to: RKFLISSSNCLA*TSRWVNSSRSL
Trigger: AAGGCTCCGGGAGCTGTTGACCCAGCGAGAGGTCCAGGCCAAACAGTTGGAACTGGAGATCAAAAACTTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CCA 72 bp GAGTCCTCTCTTTGGCATGACACCGATCCCCTTCTGTaGGTTATAGGAGCGGTACTCAGTCAGGTAGCTCAG +
Preference number: 6 (lower is better)
Translates to: ESSLWHDTDPLL*VIGAVLSQVAQ
Trigger: CTGAGCTACCTGACTGAGTACCGCTCCTATAACCCACAGAAGGGGATCGGTGTCATGCCAAAGAGAGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CAA 72 bp TCTGCTCAGAGCTGCTCTGAGCCCATCCGCAAGTTTTaGATCTCCAGTTCCAACTGTTTGGCCTGGACCTCT +
Preference number: 6 (lower is better)
Translates to: SAQSCSEPIRKF*ISSSNCLAWTS
Trigger: AGAGGTCCAGGCCAAACAGTTGGAACTGGAGATCAAAAACTTGCGGATGGGCTCAGAGCAGCTCTGAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5
CDS CCA 72 bp GTAGAACATCTGCAGCAACTCATTCTCTGTCTTTGGTaGGGGGCATTCGAAAACGTCAAAGCCATTTGTCAG +
Preference number: 6 (lower is better)
Translates to: VEHLQQLILCLW*GAFENVKAICQ
Trigger: CTGACAAATGGCTTTGACGTTTTCGAATGCCCCCCACCAAAGACAGAGAATGAGTTGCTGCAGATGTTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343933.9
ENST00000375077.5