RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CORO1B (Homo sapiens)

Ensembl gene IDs: ENSG00000172725

Ensembl transcript IDs: ENST00000341356.10, ENST00000393893.5, ENST00000453768.6, ENST00000537042.5, ENST00000539970.1, ENST00000545016.2, ENST00000545736.2, ENST00000616321.4, ENST00000627576.2

Found 613 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGGCACCTAGGCGGGCCGGGTGGTAGTAGCCCCCTGAGTCACGGCTaGGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCAGCAGTAGGA +
Preference number: 1 (lower is better)
Translates to: RHLGGPGGSSPLSHG*GGARPVLGQWPAVG
Trigger: TCCTACTGCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGACTCAGGGGGCTACTACCACCCGGCCCGCCTAGGTGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR GCA 90 bp GCCCGCACGGGGACCTGCTCTGGGCTGGACGCCTCTCCACATTGCTaGTCGCCTTCCCCAGGGTCAGCCTGCAGGCCACCATCCGCGACG +
Preference number: 1 (lower is better)
Translates to: ARTGTCSGLDASPHC*SPSPGSACRPPSAT
Trigger: CGTCGCGGATGGTGGCCTGCAGGCTGACCCTGGGGAAGGCGAGCAGCAATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR GCA 90 bp CGCTGCCAGCAAAGGCGTGCAGGTCACTCAGCAGGGCCTCAGCACTaGCCCCTGCGCTCGCTGGTCCTGGGGAGCCGAGGACCAGGTCGC +
Preference number: 1 (lower is better)
Translates to: RCQQRRAGHSAGPQH*PLRSLVLGSRGPGR
Trigger: GCGACCTGGTCCTCGGCTCCCCAGGACCAGCGAGCGCAGGGGGCAGTGCTGAGGCCCTGCTGAGTGACCTGCACGCCTTTGCTGGCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR GCA 90 bp TCAGCCCGCACGGGGACCTGCTCTGGGCTGGACGCCTCTCCACATTaGTGCTCGCCTTCCCCAGGGTCAGCCTGCAGGCCACCATCCGCG +
Preference number: 1 (lower is better)
Translates to: SARTGTCSGLDASPH*CSPSPGSACRPPSA
Trigger: CGCGGATGGTGGCCTGCAGGCTGACCCTGGGGAAGGCGAGCAGCAATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR GCA 90 bp GCTGCCCTGGCGCTGTCATCCCAGGCTGCGCTGCCAGCAAAGGCGTaGAGGTCACTCAGCAGGGCCTCAGCACTGCCCCCTGCGCTCGCT +
Preference number: 1 (lower is better)
Translates to: AALALSSQAALPAKA*RSLSRASALPPALA
Trigger: AGCGAGCGCAGGGGGCAGTGCTGAGGCCCTGCTGAGTGACCTGCACGCCTTTGCTGGCAGCGCAGCCTGGGATGACAGCGCCAGGGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR GCA 90 bp ATGGAGGCCCTGGCCCCCAGCTGCCCTGGCGCTGTCATCCCAGGCTaGGCTGCCAGCAAAGGCGTGCAGGTCACTCAGCAGGGCCTCAGC +
Preference number: 1 (lower is better)
Translates to: MEALAPSCPGAVIPG*AASKGVQVTQQGLS
Trigger: GCTGAGGCCCTGCTGAGTGACCTGCACGCCTTTGCTGGCAGCGCAGCCTGGGATGACAGCGCCAGGGCAGCTGGGGGCCAGGGCCTCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR CCA 90 bp CTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTaGGAAGGGGGCGGCGGAGGAGATGAAGGTGGCGTGTGGCTGTGG +
Preference number: 1 (lower is better)
Translates to: LGSQLARCDPLAEAE*EGGGGGDEGGVWLW
Trigger: CCACAGCCACACGCCACCTTCATCTCCTCCGCCGCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR CCA 90 bp AGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTGGGACGGGTaGGGGTGGGAACTGACCCCTGCGCTGCCTCAGAGGCTCTGGGCA +
Preference number: 1 (lower is better)
Translates to: SEESWALASAWAWDG*GWELTPALPQRLWA
Trigger: TGCCCAGAGCCTCTGAGGCAGCGCAGGGGTCAGTTCCCACCCCCACCCGTCCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR CCA 90 bp GTCACTCAGCAGGGCCTCAGCACTGCCCCCTGCGCTCGCTGGTCCTaGGGAGCCGAGGACCAGGTCGCCCTCCGTGTCACTGTCTCTGGC +
Preference number: 1 (lower is better)
Translates to: VTQQGLSTAPCARWS*GAEDQVALRVTVSG
Trigger: GCCAGAGACAGTGACACGGAGGGCGACCTGGTCCTCGGCTCCCCAGGACCAGCGAGCGCAGGGGGCAGTGCTGAGGCCCTGCTGAGTGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR TCA 90 bp GGCCAGTGGCCAGCAGTAGGAGCAGCAGCAGCAGCAGGACAACGGTaGCAGAGCTGGAGCCCACGCTGTCCTCCGCGCTGCCACCCGAGC +
Preference number: 1 (lower is better)
Translates to: GQWPAVGAAAAAGQR*QSWSPRCPPRCHPS
Trigger: GCTCGGGTGGCAGCGCGGAGGACAGCGTGGGCTCCAGCTCTGTCACCGTTGTCCTGCTGCTGCTGCTGCTCCTACTGCTGGCCACTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR GCA 90 bp GTGTGGCTGTGGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCTaGTCCTCCAGGCGGCAGATGCGGTCGCCCTGCTCCTTGACCAGC +
Preference number: 1 (lower is better)
Translates to: VWLWPYASPFSMRPS*SSRRQMRSPCSLTS
Trigger: GCTGGTCAAGGAGCAGGGCGACCGCATCTGCCGCCTGGAGGAGCAGCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR CCA 90 bp CACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTaGGACGGGTGGGGGTGGGAACTGACCCCTGCGCTGCCTCAGAGG +
Preference number: 1 (lower is better)
Translates to: HRNSEESWALASAWA*DGWGWELTPALPQR
Trigger: CCTCTGAGGCAGCGCAGGGGTCAGTTCCCACCCCCACCCGTCCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR CCA 90 bp GAGTGGGAAGGGGGCGGCGGAGGAGATGAAGGTGGCGTGTGGCTGTaGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCTGCTCCTCC +
Preference number: 1 (lower is better)
Translates to: EWEGGGGGDEGGVWL*PYASPFSMRPSCSS
Trigger: GGAGGAGCAGCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCCACCTTCATCTCCTCCGCCGCCCCCTTCCCACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR TCA 90 bp GGCTGTGACAGGGATGGGACACCAAGACCGGCCTCTACAGTGCGGTaGCATGGAGGCCCTGGCCCCCAGCTGCCCTGGCGCTGTCATCCC +
Preference number: 1 (lower is better)
Translates to: GCDRDGTPRPASTVR*HGGPGPQLPWRCHP
Trigger: GGGATGACAGCGCCAGGGCAGCTGGGGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCCTGTCACAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR GCA 90 bp ATGAAGGTGGCGTGTGGCTGTGGCCCTACGCATCCCCGTTCTCCATaGGGCCCAGCTGCTCCTCCAGGCGGCAGATGCGGTCGCCCTGCT +
Preference number: 1 (lower is better)
Translates to: MKVACGCGPTHPRSP*GPAAPPGGRCGRPA
Trigger: AGCAGGGCGACCGCATCTGCCGCCTGGAGGAGCAGCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCCACCTTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR CCA 90 bp GAAGCTGAGTGGGAAGGGGGCGGCGGAGGAGATGAAGGTGGCGTGTaGCTGTGGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCTGC +
Preference number: 1 (lower is better)
Translates to: EAEWEGGGGGDEGGV*LWPYASPFSMRPSC
Trigger: GCAGCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCCACCTTCATCTCCTCCGCCGCCCCCTTCCCACTCAGCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR TCA 90 bp AGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTaGGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTGGGACGGGTG +
Preference number: 1 (lower is better)
Translates to: RSRSSPGRRHPPQEQ*GKLGAGFGLGLGRV
Trigger: CACCCGTCCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR TCA 90 bp CGTGCCGGGCACCCACCTCCAGCTCTGGCTGTGTCGAGCGAGAAGTaGGCTCAGTGCTCGTCTGCAGTGAAGGGTGGCCCAGGCTTCCGC +
Preference number: 1 (lower is better)
Translates to: RAGHPPPALAVSSEK*AQCSSAVKGGPGFR
Trigger: GCGGAAGCCTGGGCCACCCTTCACTGCAGACGAGCACTGAGCTCACTTCTCGCTCGACACAGCCAGAGCTGGAGGTGGGTGCCCGGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR TCA 90 bp GATCTTCAGGTCCCGCTGCTTGCTGGGCACGTAGGCCTCCCGCAGTaGGATGAGGATCGGGTCGGCATCCCGCCCGCTCACCCACTCCTC +
Preference number: 1 (lower is better)
Translates to: DLQVPLLAGHVGLPQ*DEDRVGIPPAHPLL
Trigger: GAGGAGTGGGTGAGCGGGCGGGATGCCGACCCGATCCTCATCTCACTGCGGGAGGCCTACGTGCCCAGCAAGCAGCGGGACCTGAAGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR CCA 90 bp CGTGTCACTGTCTCTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTaGGCTGGACGCCTCTCCACATTGCTGCTCGCCTTCCCCAGGGTC +
Preference number: 1 (lower is better)
Translates to: RVTVSGFLSPHGDLL*AGRLSTLLLAFPRV
Trigger: GACCCTGGGGAAGGCGAGCAGCAATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR CCA 90 bp ACCCCTGGTCCACACCAGACCCTCCCCAGTCTCTCTGGAGGAGGCTaGGCTGCCGGGCCTGTCCTCCAAGGAAGAAGCAGCACCAACTTG +
Preference number: 1 (lower is better)
Translates to: TPGPHQTLPSLSGGG*AAGPVLQGRSSTNL
Trigger: CAAGTTGGTGCTGCTTCTTCCTTGGAGGACAGGCCCGGCAGCCCAGCCTCCTCCAGAGAGACTGGGGAGGGTCTGGTGTGGACCAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR CCA 90 bp TGTGTCGAGCGAGAAGTGAGCTCAGTGCTCGTCTGCAGTGAAGGGTaGCCCAGGCTTCCGCTTCCTGCCCACATACCCCACCTGCCCCTC +
Preference number: 1 (lower is better)
Translates to: CVEREVSSVLVCSEG*PRLPLPAHIPHLPL
Trigger: GAGGGGCAGGTGGGGTATGTGGGCAGGAAGCGGAAGCCTGGGCCACCCTTCACTGCAGACGAGCACTGAGCTCACTTCTCGCTCGACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR TCA 90 bp CTCTGGCTGTGTCGAGCGAGAAGTGAGCTCAGTGCTCGTCTGCAGTaGAGGGTGGCCCAGGCTTCCGCTTCCTGCCCACATACCCCACCT +
Preference number: 1 (lower is better)
Translates to: LWLCRARSELSARLQ*RVAQASASCPHTPP
Trigger: AGGTGGGGTATGTGGGCAGGAAGCGGAAGCCTGGGCCACCCTTCACTGCAGACGAGCACTGAGCTCACTTCTCGCTCGACACAGCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR TCA 90 bp AGCCATGGCATCTTGGGAAGCAGAGGCACGGGGAGTGAGCGGCTGTaGCAGGGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACA +
Preference number: 1 (lower is better)
Translates to: SHGILGSRGTGSERL*QGWDTKTGLYSAVT
Trigger: TGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCCTGTCACAGCCGCTCACTCCCCGTGCCTCTGCTTCCCAAGATGCCATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR GCA 90 bp TGGTCCACACCAGACCCTCCCCAGTCTCTCTGGAGGAGGCTGGGCTaGCGGGCCTGTCCTCCAAGGAAGAAGCAGCACCAACTTGAAGCT +
Preference number: 1 (lower is better)
Translates to: WSTPDPPQSLWRRLG*RACPPRKKQHQLEA
Trigger: AGCTTCAAGTTGGTGCTGCTTCTTCCTTGGAGGACAGGCCCGGCAGCCCAGCCTCCTCCAGAGAGACTGGGGAGGGTCTGGTGTGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR GCA 90 bp TCCAGCTCTGGCTGTGTCGAGCGAGAAGTGAGCTCAGTGCTCGTCTaGAGTGAAGGGTGGCCCAGGCTTCCGCTTCCTGCCCACATACCC +
Preference number: 1 (lower is better)
Translates to: SSSGCVEREVSSVLV*SEGWPRLPLPAHIP
Trigger: GGGTATGTGGGCAGGAAGCGGAAGCCTGGGCCACCCTTCACTGCAGACGAGCACTGAGCTCACTTCTCGCTCGACACAGCCAGAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR CCA 90 bp CAGCCAAGCAGAAAAGGCCAAGGCCTTATTTGGTCAACCAGGCTCTaGCCCTGTGAGATCAGCCCCCATCCCTCCAGCCTCCTCCCTACC +
Preference number: 1 (lower is better)
Translates to: QPSRKGQGLIWSTRL*PCEISPHPSSLLPT
Trigger: GGTAGGGAGGAGGCTGGAGGGATGGGGGCTGATCTCACAGGGCCAGAGCCTGGTTGACCAAATAAGGCCTTGGCCTTTTCTGCTTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR TCA 90 bp GCTGGGCTGCCGGGCCTGTCCTCCAAGGAAGAAGCAGCACCAACTTaGAGCTGGATGCAGCCTTGCATGTGTTCTCAGGTCTTCTGCCTC +
Preference number: 1 (lower is better)
Translates to: AGLPGLSSKEEAAPT*SWMQPCMCSQVFCL
Trigger: GAGGCAGAAGACCTGAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCTTCCTTGGAGGACAGGCCCGGCAGCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp CAGAGCTGGAGCCCACGCTGTCCTCCGCGCTGCCACCCGAGCCCAAGGCCCCTGTCCCCACCACGGGGCTaGCCCAGCGGCAGGGTTTCC +
Preference number: 2 (lower is better)
Translates to: QSWSPRCPPRCHPSPRPLSPPRG*PSGRVS
Trigger: GGAAACCCTGCCGCTGGGGCAGCCCCGTGGTGGGGA...CAGGGGCCTTGGGCTCGGGTGGCAGCGCGGAGGACAGCGTGGGCTCCAGCTCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GGTGGGAGGAGCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCGCTTCGGCCTGGGCCTaGGACGGGTGGGGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: GGRSPGPWRAGCQTTRCAASAWA*DGWGWE
Trigger: TTCCCACCCCCACCCGTCCCAGGCCCAGGCCGAAGC...GGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGCTCCTCCCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR CCA 90 bp CAGAGCTGGAGCCCACGCTGTCCTCCGCGCTGCCACCCGAGCCCAAGGCCCCTGAGGAGCCCGGGGCCATaGCGGGCCGGCTGTCAGACA +
Preference number: 2 (lower is better)
Translates to: QSWSPRCPPRCHPSPRPLRSPGP*RAGCQT
Trigger: TGTCTGACAGCCGGCCCGCCATGGCCCCGGGCTCCT...CAGGGGCCTTGGGCTCGGGTGGCAGCGCGGAGGACAGCGTGGGCTCCAGCTCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR TCA 90 bp CCCCCTGAGTCACGGCTGAGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCAGCTCCACTCCCAGTCCCTaGGGGCCACAGGCGTGCAGG +
Preference number: 2 (lower is better)
Translates to: PPESRLRRRQASARPVASSTPSP*GPQACR
Trigger: CCTGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGA...GCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGACTCAGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp CCCCCTGAGTCACGGCTGAGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCAGCAGCCCCGACCGCCTGTaGCCCCCATCCCAAGAACCC +
Preference number: 2 (lower is better)
Translates to: PPESRLRRRQASARPVASSPDRL*PPSQEP
Trigger: GGGTTCTTGGGATGGGGGCCACAGGCGGTCGGGGCT...GCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGACTCAGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp CCCCCTGAGTCACGGCTGAGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCAGCGCCTGGGATGGGGGATaGAGGGGCCTGGATGCACCC +
Preference number: 2 (lower is better)
Translates to: PPESRLRRRQASARPVASAWDGG*RGLDAP
Trigger: GGGTGCATCCAGGCCCCTCCATCCCCCATCCCAGGC...GCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGACTCAGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp GGTGGGAGGAGCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCTCAGGTCCCGCTGCTTaGTGGGCACGTAGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: GGRSPGPWRAGCQTTRCASGPAA*WARRPP
Trigger: GGGAGGCCTACGTGCCCAGCAAGCAGCGGGACCTGA...GGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGCTCCTCCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR CCA 90 bp CCCAGCGGCAGGGTTTCCGTTCCACTCCCAGTCCCTGAGGGCCACAGGCGTGCAGGGCCTGGTCCGGTATaGGGTGCTGGGGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: PSGRVSVPLPVPEGHRRAGPGPV*GAGGQA
Trigger: GGCCTGGCCCCCAGCACCCCATACCGGACCAGGCCC...TGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGAACGGAAACCCTGCCGCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR TCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGGGCGGCGGAGGAGATaGAGGTGGCGTGTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: ASEALGSQLARCDPLAEAGRRRR*RWRVAV
Trigger: CACAGCCACACGCCACCTTCATCTCCTCCGCCGCCC...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR TCA 90 bp TCACGGCTGAGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCAGCAGTAGGAGCGCCTCTACAGTGCGGTaGCATGGAGGCCCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: SRLRRRQASARPVASSRSASTVR*HGGPGP
Trigger: GGGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGC...GCTCCTACTGCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR TCA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCCGATCTCGCACTTGCTaGCCTCCAGGCCCCGCTTGG +
Preference number: 2 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGRSRTC*PPGPAW
Trigger: CCAAGCGGGGCCTGGAGGTCAGCAAGTGCGAGATCG...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR GCA 90 bp CAGAGCTGGAGCCCACGCTGTCCTCCGCGCTGCCACCCGAGCCCAAGGCCCCTGGTGGGAACTGACCCCTaGGCTGCCTCAGAGGCTCTG +
Preference number: 2 (lower is better)
Translates to: QSWSPRCPPRCHPSPRPLVGTDP*AASEAL
Trigger: CAGAGCCTCTGAGGCAGCGCAGGGGTCAGTTCCCAC...CAGGGGCCTTGGGCTCGGGTGGCAGCGCGGAGGACAGCGTGGGCTCCAGCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp CAGAGCTGGAGCCCACGCTGTCCTCCGCGCTGCCACCCGAGCCCAAGGCCCCTGCTGCCCATACCCCGCTaGGGCTCCTTGCTGGTGAAC +
Preference number: 2 (lower is better)
Translates to: QSWSPRCPPRCHPSPRPLLPIPR*GSLLVN
Trigger: GTTCACCAGCAAGGAGCCGCAGCGGGGTATGGGCAG...CAGGGGCCTTGGGCTCGGGTGGCAGCGCGGAGGACAGCGTGGGCTCCAGCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR CCA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCCTGGCAGAAGCTGAGTaGGAAGGGGGCGGCGGAGGA +
Preference number: 2 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGLAEAE*EGGGGG
Trigger: TCCTCCGCCGCCCCCTTCCCACTCAGCTTCTGCCAG...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR CCA 90 bp CCCAAGGCCCCTGGCAGGGCCAGCAGCATCCCGAGCCCTAAGGTGCAGGGCAGATGGGCCTGGGACGGGTaGGGGTGGGAACTGACCCCT +
Preference number: 2 (lower is better)
Translates to: PKAPGRASSIPSPKVQGRWAWDG*GWELTP
Trigger: AGGGGTCAGTTCCCACCCCCACCCGTCCCAGGCCCA...TCTGCCCTGCACCTTAGGGCTCGGGATGCTGCTGGCCCTGCCAGGGGCCTTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GGCGTGTGGCTGTGGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCTGCTCCCAGCAGCAGTGGTGGTaGAGGCGGGGGCCCCTAGGT +
Preference number: 2 (lower is better)
Translates to: GVWLWPYASPFSMRPSCSQQQWW*RRGPLG
Trigger: ACCTAGGGGCCCCCGCCTCCACCACCACTGCTGCTG...GGAGCAGCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR TCA 90 bp TCACGGCTGAGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCAGCAGTAGGAGCCAGGCTCTGGCCCTGTaGGATCAGCCCCCATCCCTC +
Preference number: 2 (lower is better)
Translates to: SRLRRRQASARPVASSRSQALAL*DQPPSL
Trigger: GAGGGATGGGGGCTGATCTCACAGGGCCAGAGCCTG...GCTCCTACTGCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp GCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTAGCCAGCTAGCCCGGTaGGACCCGCTGGCAGAAGCT +
Preference number: 2 (lower is better)
Translates to: ARGHGGPAVRQHVAPADLSQLAR*DPLAEA
Trigger: AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCT...AAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR GCA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCCAGGCTTCCGCTTCCTaGCCACATACCCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGQASAS*PHTPPA
Trigger: GGCAGGTGGGGTATGTGGGCAGGAAGCGGAAGCCTG...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp GGGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCGCCCGCACGGGGACCTaGTCTGGGCTGGACGCCTCT +
Preference number: 2 (lower is better)
Translates to: GMGHQDRPLQCGDMEALAARTGT*SGLDAS
Trigger: AGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGC...GGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCGGCCCCGCTTGGGCATaGTGCCCATACCCCGCTGCG +
Preference number: 2 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPGPAWA*CPYPAA
Trigger: CGCAGCGGGGTATGGGCAGCATGCCCAAGCGGGGCC...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR CCA 90 bp GACCAGGTAAGGGCCTTCCCAGGGCTCCTGACAGGGGCCTGGTCCGGTATGGGGTGGGACGGGTGGGGGTaGGAACTGACCCCTGCGCTG +
Preference number: 2 (lower is better)
Translates to: DQVRAFPGLLTGAWSGMGWDGWG*ELTPAL
Trigger: CAGCGCAGGGGTCAGTTCCCACCCCCACCCGTCCCA...CCCCATACCGGACCAGGCCCCTGTCAGGAGCCCTGGGAAGGCCCTTACCTGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp TCCATGCGGCCCAGCTGCTCCTCCAGGCGGCAGATGCGGTCGCCCTGCTCCTTGCAGAGGGCTGGGCAGTaGTCGGGGAGATGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: SMRPSCSSRRQMRSPCSLQRAGQ*SGRWSL
Trigger: GAGGGACCATCTCCCCGACCACTGCCCAGCCCTCTG...CAAGGAGCAGGGCGACCGCATCTGCCGCCTGGAGGAGCAGCTGGGCCGCATGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR CCA 90 bp TCGCTGGTCCTGGGGAGCCGAGGACCAGGTCGCCCTCCGTGTCACTGTCTCTGGTCGGAACAGGCTAGGTaGGGGGTGTCGGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SLVLGSRGPGRPPCHCLWSEQAR*GVSGEG
Trigger: CCCCTCCCCCGACACCCCCCACCTAGCCTGTTCCGA...CCAGAGACAGTGACACGGAGGGCGACCTGGTCCTCGGCTCCCCAGGACCAGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GGTGGGAGGAGCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCAGGTTTTCCTCACTGTaGGGAGCTGGGGTGCCAGCG +
Preference number: 2 (lower is better)
Translates to: GGRSPGPWRAGCQTTRCARFSSL*GAGVPA
Trigger: CGCTGGCACCCCAGCTCCCCACAGTGAGGAAAACCT...GGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGCTCCTCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537042.5
3UTR-3UTR TCA 90 bp AGCTCCACAGGCCCAGACATTCTAGCCCCGACCGCCTGTGGCCCCCATCCCAAGGGGCGGCGGAGGAGATaGAGGTGGCGTGTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: SSTGPDILAPTACGPHPKGRRRR*RWRVAV
Trigger: CACAGCCACACGCCACCTTCATCTCCTCCGCCGCCC...CTTGGGATGGGGGCCACAGGCGGTCGGGGCTAGAATGTCTGGGCCTGTGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR TCA 90 bp TCCATGCGGCCCAGCTGCTCCTCCAGGCGGCAGATGCGGTCGCCCTGCTCCTTGCCTCCACAGGAACAGTaGGGAAAGCTGGGCGCTGGC +
Preference number: 2 (lower is better)
Translates to: SMRPSCSSRRQMRSPCSLPPQEQ*GKLGAG
Trigger: GCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGG...CAAGGAGCAGGGCGACCGCATCTGCCGCCTGGAGGAGCAGCTGGGCCGCATGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR TCA 90 bp GGGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCGTGGTAGTAGCCCCCTaGGTCACGGCTGAGGCGGCG +
Preference number: 2 (lower is better)
Translates to: GMGHQDRPLQCGDMEALAVVVAP*VTAEAA
Trigger: CGCCGCCTCAGCCGTGACTCAGGGGGCTACTACCAC...GGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR TCA 90 bp GAAGGTGGCGTGTGGCTGTGGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCGTAGGCCTCCCGCAGTaGGATGAGGATCGGGTCGGC +
Preference number: 2 (lower is better)
Translates to: EGGVWLWPYASPFSMRPSVGLPQ*DEDRVG
Trigger: GCCGACCCGATCCTCATCTCACTGCGGGAGGCCTAC...GCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCCACCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR GCA 90 bp AGCTCCACAGGCCCAGACATTCTAGCCCCGACCGCCTGTGGCCCCCATCCCAAGCCTGCCCCTCCCTGCTaGAGGACCCCTGGTCCACAC +
Preference number: 2 (lower is better)
Translates to: SSTGPDILAPTACGPHPKPAPPC*RTPGPH
Trigger: GTGTGGACCAGGGGTCCTGCAGCAGGGAGGGGCAGG...CTTGGGATGGGGGCCACAGGCGGTCGGGGCTAGAATGTCTGGGCCTGTGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCTGGTCCGGTATGGGGTaGTGGGGGCCAGGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPWSGMG*WGPGLE
Trigger: CTCCAGGCCTGGCCCCCAGCACCCCATACCGGACCA...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp AGGCCCAGACATTCTAGCCCCGACCGCCTGTGGCCCCCATCCCAAGAACCCGGGTCAGGTCCCGCTGCTTaGTGGGCACGTAGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: RPRHSSPDRLWPPSQEPGSGPAA*WARRPP
Trigger: GGGAGGCCTACGTGCCCAGCAAGCAGCGGGACCTGA...CCCGGGTTCTTGGGATGGGGGCCACAGGCGGTCGGGGCTAGAATGTCTGGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR CCA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCTGGGACGGGTGGGGGTaGGAACTGACCCCTGCGCTG +
Preference number: 2 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPWDGWG*ELTPAL
Trigger: CAGCGCAGGGGTCAGTTCCCACCCCCACCCGTCCCA...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACTGGGACGGGTGGGGGTaGGAACTGACCCCTGCGCTG +
Preference number: 2 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDWDGWG*ELTPAL
Trigger: CAGCGCAGGGGTCAGTTCCCACCCCCACCCGTCCCA...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR CCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGATGGGCCTGGGACGGGTaGGGGTGGGAACTGACCCCT +
Preference number: 2 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRWAWDG*GWELTP
Trigger: AGGGGTCAGTTCCCACCCCCACCCGTCCCAGGCCCA...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR CCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGAAGGAAAGCTGGGCGCTaGCTTCGGCCTGGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRRKAGR*LRPGPG
Trigger: CCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCT...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR CCA 90 bp TCGCTGGTCCTGGGGAGCCGAGGACCAGGTCGCCCTCCGTGTCACTGTCTCTGGGAGGGAGCAGAGGGCTaGGCAGTGGTCGGGGAGATG +
Preference number: 2 (lower is better)
Translates to: SLVLGSRGPGRPPCHCLWEGAEG*AVVGEM
Trigger: CATCTCCCCGACCACTGCCCAGCCCTCTGCTCCCTC...CCAGAGACAGTGACACGGAGGGCGACCTGGTCCTCGGCTCCCCAGGACCAGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp CTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGACGCCTCTCCACATGGGGAGCAATGCCTGTaGGGCTGCTCACTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: LASSARTGTCSGLDASPHGEQCL*GCSLPP
Trigger: TGGGGGCAGTGAGCAGCCCCACAGGCATTGCTCCCC...ATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCTCCGGTATGGGGTGCTaGGGGCCAGGCCTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPSGMGC*GPGLES
Trigger: GGACTCCAGGCCTGGCCCCCAGCACCCCATACCGGA...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp CGTGTCACTGTCTCTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGATCCGGTATGGGGTGCTaGGGGCCAGGCCTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: RVTVSGFLSPHGDLLWAGSGMGC*GPGLES
Trigger: GGACTCCAGGCCTGGCCCCCAGCACCCCATACCGGA...TCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCGCTCTCCCTGAGGCCTaGGATGGGGGATGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPALPEA*DGGWRG
Trigger: GCCCCTCCATCCCCCATCCCAGGCCTCAGGGAGAGC...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp TCACGGCTGAGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCAGCAGTAGGAGCCCGTGTCACTGTCTCTaGCTTCCTCAGCCCGCACGG +
Preference number: 2 (lower is better)
Translates to: SRLRRRQASARPVASSRSPCHCL*LPQPAR
Trigger: CCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACGG...GCTCCTACTGCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR TCA 90 bp GACCAGGTAAGGGCCTTCCCAGGGCTCCTGACAGGGGCCTGGTCCGGTATGGGGCCTCCACAGGAACAGTaGGGAAAGCTGGGCGCTGGC +
Preference number: 2 (lower is better)
Translates to: DQVRAFPGLLTGAWSGMGPPQEQ*GKLGAG
Trigger: GCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGG...CCCCATACCGGACCAGGCCCCTGTCAGGAGCCCTGGGAAGGCCCTTACCTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR TCA 90 bp TCCGTGTCACTGTCTCTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGCAGGCTCTGGCCCTGTaGGATCAGCCCCCATCCCTC +
Preference number: 2 (lower is better)
Translates to: SVSLSLASSARTGTCSGLQALAL*DQPPSL
Trigger: GAGGGATGGGGGCTGATCTCACAGGGCCAGAGCCTG...CAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp GCGGCAGGGTTTCCGTTCCACTCCCAGTCCCTGAGGGCCACAGGCGTGCAGGGCCAATGCCTGTGGGGCTaGTCACTGCCCCCAGACCTT +
Preference number: 2 (lower is better)
Translates to: AAGFPFHSQSLRATGVQGQCLWG*SLPPDL
Trigger: AAGGTCTGGGGGCAGTGAGCAGCCCCACAGGCATTG...GCCCTGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGAACGGAAACCCTGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp CCCAGCGGCAGGGTTTCCGTTCCACTCCCAGTCCCTGAGGGCCACAGGCGTGCACAGGCTTCCGCTTCCTaGCCACATACCCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: PSGRVSVPLPVPEGHRRAQASAS*PHTPPA
Trigger: GGCAGGTGGGGTATGTGGGCAGGAAGCGGAAGCCTG...TGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGAACGGAAACCCTGCCGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACTGGCAGAAGCTGAGTaGGAAGGGGGCGGCGGAGGA +
Preference number: 2 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRLAEAE*EGGGGG
Trigger: TCCTCCGCCGCCCCCTTCCCACTCAGCTTCTGCCAG...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR CCA 90 bp TGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCTGGGACGGGTGGGGGTaGGAACTGACCCCTGCGCTG +
Preference number: 2 (lower is better)
Translates to: WSGRWSLRGRGARLGVDIWDGWG*ELTPAL
Trigger: CAGCGCAGGGGTCAGTTCCCACCCCCACCCGTCCCA...GATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR CCA 90 bp AGATGGGAGGGAGGGAAGGAGGTTGCTAGCTGGTGTCAGGGCTGGCTCTCCCTGGCTTCGGCCTGGGCCTaGGACGGGTGGGGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: RWEGGKEVASWCQGWLSLASAWA*DGWGWE
Trigger: TTCCCACCCCCACCCGTCCCAGGCCCAGGCCGAAGC...CAGGGAGAGCCAGCCCTGACACCAGCTAGCAACCTCCTTCCCTCCCTCCCATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp CCCAAGGCCCCTGGCAGGGCCAGCAGCATCCCGAGCCCTAAGGTGCAGGGCAGAGTCTGCAGTGAAGGGTaGCCCAGGCTTCCGCTTCCT +
Preference number: 2 (lower is better)
Translates to: PKAPGRASSIPSPKVQGRVCSEG*PRLPLP
Trigger: AGGAAGCGGAAGCCTGGGCCACCCTTCACTGCAGAC...TCTGCCCTGCACCTTAGGGCTCGGGATGCTGCTGGCCCTGCCAGGGGCCTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCCACGGGGACCTGCTCTaGGCTGGACGCCTCTCCACA +
Preference number: 2 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPHGDLL*AGRLST
Trigger: TGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTG...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR TCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACCCTCCACAGGAACAGTaGGGAAAGCTGGGCGCTGGC +
Preference number: 2 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDPPQEQ*GKLGAG
Trigger: GCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGG...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR TCA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCCTCAGTTTCCCTGCCTaGCAATCCAGGGGAGCAATG +
Preference number: 2 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGLSFPA*QSRGAM
Trigger: CATTGCTCCCCTGGATTGTCAGGCAGGGAAACTGAG...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR TCA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCAGTGCTCGTCTGCAGTaGAGGGTGGCCCAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPSARLQ*RVAQAS
Trigger: GGAAGCCTGGGCCACCCTTCACTGCAGACGAGCACT...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR TCA 90 bp TGCTCATCCTCCTGTCGCTCAAGGTCATTGTCTGTGGACCCCAGCTCAGCTCGGGGTCGCCCTGCTCCTTaGCCAGCGCCCTCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: CSSSCRSRSLSVDPSSARGRPAP*PAPSGP
Trigger: GGGCCCTGAGGGCGCTGGTCAAGGAGCAGGGCGACC...CCGAGCTGAGCTGGGGTCCACAGACAATGACCTTGAGCGACAGGAGGATGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR GCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACGTGGGAACTGACCCCTaGGCTGCCTCAGAGGCTCTG +
Preference number: 2 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDVGTDP*AASEAL
Trigger: CAGAGCCTCTGAGGCAGCGCAGGGGTCAGTTCCCAC...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR GCA 90 bp CTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGACGCCTCTCCACATAGCTCAGTGCTCGTCTaGAGTGAAGGGTGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: LASSARTGTCSGLDASPHSSVLV*SEGWPR
Trigger: CCTGGGCCACCCTTCACTGCAGACGAGCACTGAGCT...ATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp AGATGGGAGGGAGGGAAGGAGGTTGCTAGCTGGTGTCAGGGCTGGCTCTCCCTGGGAGGGGTGCTGAGGTaGAGCCAGCCTCCCCCACCA +
Preference number: 2 (lower is better)
Translates to: RWEGGKEVASWCQGWLSLGGVLR*SQPPPP
Trigger: TGGTGGGGGAGGCTGGCTGCACCTCAGCACCCCTCC...CAGGGAGAGCCAGCCCTGACACCAGCTAGCAACCTCCTTCCCTCCCTCCCATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCTGGCAGAAGCTGAGTaGGAAGGGGGCGGCGGAGGA +
Preference number: 2 (lower is better)
Translates to: VVGEMVPQRSRSSPGRRHLAEAE*EGGGGG
Trigger: TCCTCCGCCGCCCCCTTCCCACTCAGCTTCTGCCAG...ATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR CCA 90 bp CCGCCCAGGCTCCAGGAATGCAAGTTCCCGCTCACAGGAAGACCAGGTAAGGGCAGGAAAGCTGGGCGCTaGCTTCGGCCTGGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PPRLQECKFPLTGRPGKGRKAGR*LRPGPG
Trigger: CCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCT...GCCCTTACCTGGTCTTCCTGTGAGCGGGAACTTGCATTCCTGGAGCCTGGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp CTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGACGCCTCTCCACATAACAGTGAGGAAAGCTaGGCGCTGGCTTCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LASSARTGTCSGLDASPHNSEES*ALASAW
Trigger: CCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTT...ATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp TCGCTGGTCCTGGGGAGCCGAGGACCAGGTCGCCCTCCGTGTCACTGTCTCTGGCAGTGGTCGGGGAGATaGTCCCTCAGAGGTCGAGGA +
Preference number: 2 (lower is better)
Translates to: SLVLGSRGPGRPPCHCLWQWSGR*SLRGRG
Trigger: TCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG...CCAGAGACAGTGACACGGAGGGCGACCTGGTCCTCGGCTCCCCAGGACCAGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp TCGCTGGTCCTGGGGAGCCGAGGACCAGGTCGCCCTCCGTGTCACTGTCTCTGGGTCTGCAGTGAAGGGTaGCCCAGGCTTCCGCTTCCT +
Preference number: 2 (lower is better)
Translates to: SLVLGSRGPGRPPCHCLWVCSEG*PRLPLP
Trigger: AGGAAGCGGAAGCCTGGGCCACCCTTCACTGCAGAC...CCAGAGACAGTGACACGGAGGGCGACCTGGTCCTCGGCTCCCCAGGACCAGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp CTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGACGCCTCTCCACATGGACCTGCTCTGGGCTaGACGCCTCTCCACATTGCT +
Preference number: 2 (lower is better)
Translates to: LASSARTGTCSGLDASPHGPALG*TPLHIA
Trigger: AGCAATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCC...ATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCCAAAGTACCGGATGCTaGAGTCACCCTTGCCGCAGA +
Preference number: 2 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGQSTGC*SHPCRR
Trigger: TCTGCGGCAAGGGTGACTCCAGCATCCGGTACTTTG...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR TCA 90 bp CTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGGGCGGCGGAGGAGATaGAGGTGGCGTGTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: LRGRGARLGVDILHRNSEGRRRR*RWRVAV
Trigger: CACAGCCACACGCCACCTTCATCTCCTCCGCCGCCC...CTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR TCA 90 bp CGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGGGCGGCGGAGGAGATaGAGGTGGCGTGTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: RGARLGVDILHRNSEESWGRRRR*RWRVAV
Trigger: CACAGCCACACGCCACCTTCATCTCCTCCGCCGCCC...CCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR TCA 90 bp AGCCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCGGTGGGGGTGGGAACTaGCCCCTGCGCTGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: SLQATIRDVVIVCVLLILGGGGN*PLRCLR
Trigger: TCTGAGGCAGCGCAGGGGTCAGTTCCCACCCCCACC...GAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR TCA 90 bp TCGCTGGTCCTGGGGAGCCGAGGACCAGGTCGCCCTCCGTGTCACTGTCTCTGGGTGTCGAGCGAGAAGTaGGCTCAGTGCTCGTCTGCA +
Preference number: 2 (lower is better)
Translates to: SLVLGSRGPGRPPCHCLWVSSEK*AQCSSA
Trigger: TGCAGACGAGCACTGAGCTCACTTCTCGCTCGACAC...CCAGAGACAGTGACACGGAGGGCGACCTGGTCCTCGGCTCCCCAGGACCAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp CCCAAGGCCCCTGGCAGGGCCAGCAGCATCCCGAGCCCTAAGGTGCAGGGCAGAGCACCCAGAGGCAACTaGTCATCTTCTGCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: PKAPGRASSIPSPKVQGRAPRGN*SSSAWP
Trigger: TGGCCAAGCAGAAGATGAGCAGTTGCCTCTGGGTGC...TCTGCCCTGCACCTTAGGGCTCGGGATGCTGCTGGCCCTGCCAGGGGCCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCCCTGATGTCTATCACTaGAGCCCACCCCAGCACCCC +
Preference number: 2 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPPDVYH*SPPQHP
Trigger: GGGGTGCTGGGGTGGGCTGCAGTGATAGACATCAGG...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCCTCGAGTCCAGTTCCTaGAGGGCCATGGGTTCCTCG +
Preference number: 2 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPLESSS*RAMGSS
Trigger: CGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAG...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR CCA 90 bp CCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCCTAGGAAAGCTGGGCGCTaGCTTCGGCCTGGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PAGHHPRRGHSLCPAHPPRKAGR*LRPGPG
Trigger: CCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCT...AGGAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCAGGTCAACAGTGAGGAAAGCTaGGCGCTGGCTTCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GHGGPAVRQHVAPADLQVNSEES*ALASAW
Trigger: CCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTT...GACCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR TCA 90 bp CCGCCCAGGCTCCAGGAATGCAAGTTCCCGCTCACAGGAAGACCAGGTAAGGGCCCTCCACAGGAACAGTaGGGAAAGCTGGGCGCTGGC +
Preference number: 2 (lower is better)
Translates to: PPRLQECKFPLTGRPGKGPPQEQ*GKLGAG
Trigger: GCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGG...GCCCTTACCTGGTCTTCCTGTGAGCGGGAACTTGCATTCCTGGAGCCTGGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp ACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTGTGGGAACTGACCCCTaGGCTGCCTCAGAGGCTCTG +
Preference number: 2 (lower is better)
Translates to: TSSTGTVRKAGRWLRPGPVGTDP*AASEAL
Trigger: CAGAGCCTCTGAGGCAGCGCAGGGGTCAGTTCCCAC...AGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR GCA 90 bp CTGCATGGCCTGCTCACCGTGCTCAAACTTCACCCCAGTGAGGCTGAACCTGACGGAGGGGTGCTGAGGTaGAGCCAGCCTCCCCCACCA +
Preference number: 2 (lower is better)
Translates to: LHGLLTVLKLHPSEAEPDGGVLR*SQPPPP
Trigger: TGGTGGGGGAGGCTGGCTGCACCTCAGCACCCCTCC...GTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAGCACGGTGAGCAGGCCATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp GGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCAGGTCCCGCTGCTTCTCGAGTCCAGTTCCTaGAGGGCCATGGGTTCCTCG +
Preference number: 2 (lower is better)
Translates to: GPAVRQHVAPADLQVPLLLESSS*RAMGSS
Trigger: CGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAG...AAGCAGCGGGACCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR GCA 90 bp CCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCCTCAGATGCGGTCGCCCTaGTCCTTGACCAGCGCCCTC +
Preference number: 2 (lower is better)
Translates to: PAGHHPRRGHSLCPAHPPQMRSP*SLTSAL
Trigger: GAGGGCGCTGGTCAAGGAGCAGGGCGACCGCATCTG...AGGAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR CCA 90 bp TGCTCATCCTCCTGTCGCTCAAGGTCATTGTCTGTGGACCCCAGCTCAGCTCGGTGGGCCTGGGACGGGTaGGGGTGGGAACTGACCCCT +
Preference number: 2 (lower is better)
Translates to: CSSSCRSRSLSVDPSSARWAWDG*GWELTP
Trigger: AGGGGTCAGTTCCCACCCCCACCCGTCCCAGGCCCA...CCGAGCTGAGCTGGGGTCCACAGACAATGACCTTGAGCGACAGGAGGATGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCAGGTCCCGCTGCTTAACAGTGAGGAAAGCTaGGCGCTGGCTTCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GPAVRQHVAPADLQVPLLNSEES*ALASAW
Trigger: CCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTT...AAGCAGCGGGACCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR CCA 90 bp GAGCAATGCCTGTGGGGCTGCTCACTGCCCCCAGACCTTCTGCACATGTGTGACCAGAGGGCTGGGCAGTaGTCGGGGAGATGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: EQCLWGCSLPPDLLHMCDQRAGQ*SGRWSL
Trigger: GAGGGACCATCTCCCCGACCACTGCCCAGCCCTCTG...GTCACACATGTGCAGAAGGTCTGGGGGCAGTGAGCAGCCCCACAGGCATTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GAGCAATGCCTGTGGGGCTGCTCACTGCCCCCAGACCTTCTGCACATGTGTGACGAGGGAGCAGAGGGCTaGGCAGTGGTCGGGGAGATG +
Preference number: 2 (lower is better)
Translates to: EQCLWGCSLPPDLLHMCDEGAEG*AVVGEM
Trigger: CATCTCCCCGACCACTGCCCAGCCCTCTGCTCCCTC...GTCACACATGTGCAGAAGGTCTGGGGGCAGTGAGCAGCCCCACAGGCATTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GATGGAGGGGCCTGGATGCACCCAGAGGCAACTGCTCATCTTCTGCTTGGCCAGGGGGAGCAATGCCTGTaGGGCTGCTCACTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: DGGAWMHPEATAHLLLGQGEQCL*GCSLPP
Trigger: TGGGGGCAGTGAGCAGCCCCACAGGCATTGCTCCCC...CTGGCCAAGCAGAAGATGAGCAGTTGCCTCTGGGTGCATCCAGGCCCCTCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCACCCACCTCCAGCTCTaGCTGTGTCGAGCGAGAAGT +
Preference number: 2 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPTHLQL*LCRARS
Trigger: ACTTCTCGCTCGACACAGCCAGAGCTGGAGGTGGGT...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp CCGCCCAGGCTCCAGGAATGCAAGTTCCCGCTCACAGGAAGACCAGGTAAGGGCTCCGAGGCTTACCATTaGTCCGCAGGCCCCTCCGTG +
Preference number: 2 (lower is better)
Translates to: PPRLQECKFPLTGRPGKGSEAYH*SAGPSV
Trigger: CACGGAGGGGCCTGCGGACCAATGGTAAGCCTCGGA...GCCCTTACCTGGTCTTCCTGTGAGCGGGAACTTGCATTCCTGGAGCCTGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp TGCTCATCCTCCTGTCGCTCAAGGTCATTGTCTGTGGACCCCAGCTCAGCTCGGAGCCCCGACCGCCTGTaGCCCCCATCCCAAGAACCC +
Preference number: 2 (lower is better)
Translates to: CSSSCRSRSLSVDPSSARSPDRL*PPSQEP
Trigger: GGGTTCTTGGGATGGGGGCCACAGGCGGTCGGGGCT...CCGAGCTGAGCTGGGGTCCACAGACAATGACCTTGAGCGACAGGAGGATGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCCAAGGTCATTGTCTGTaGACCCCAGCTCAGCTCGGG +
Preference number: 2 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPQGHCL*TPAQLG
Trigger: CCCGAGCTGAGCTGGGGTCCACAGACAATGACCTTG...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp TCGCTGGTCCTGGGGAGCCGAGGACCAGGTCGCCCTCCGTGTCACTGTCTCTGGCAAAGTACCGGATGCTaGAGTCACCCTTGCCGCAGA +
Preference number: 2 (lower is better)
Translates to: SLVLGSRGPGRPPCHCLWQSTGC*SHPCRR
Trigger: TCTGCGGCAAGGGTGACTCCAGCATCCGGTACTTTG...CCAGAGACAGTGACACGGAGGGCGACCTGGTCCTCGGCTCCCCAGGACCAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR CCA 90 bp CTGCATGGCCTGCTCACCGTGCTCAAACTTCACCCCAGTGAGGCTGAACCTGACGGTCCCGCTGCTTGCTaGGCACGTAGGCCTCCCGCA +
Preference number: 2 (lower is better)
Translates to: LHGLLTVLKLHPSEAEPDGPAAC*ARRPPA
Trigger: TGCGGGAGGCCTACGTGCCCAGCAAGCAGCGGGACC...GTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAGCACGGTGAGCAGGCCATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR CCA 90 bp CCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCCTCATCAGCAGCAGTGGTaGTGGAGGCGGGGGCCCCTA +
Preference number: 2 (lower is better)
Translates to: PAGHHPRRGHSLCPAHPPHQQQW*WRRGPL
Trigger: TAGGGGCCCCCGCCTCCACCACCACTGCTGCTGATG...AGGAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR GCA 90 bp TGCTCGTCTGCAGTGAAGGGTGGCCCAGGCTTCCGCTTCCTGCCCACATACCCCCCCAGGCTCCAGGAATaGAAGTTCCCGCTCACAGGA +
Preference number: 2 (lower is better)
Translates to: CSSAVKGGPGFRFLPTYPPRLQE*KFPLTG
Trigger: TCCTGTGAGCGGGAACTTGCATTCCTGGAGCCTGGG...GGGGTATGTGGGCAGGAAGCGGAAGCCTGGGCCACCCTTCACTGCAGACGAGCA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp CCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCCTCTGCCAGCAAAGGCGTaGAGGTCACTCAGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: PAGHHPRRGHSLCPAHPPLPAKA*RSLSRA
Trigger: GGCCCTGCTGAGTGACCTGCACGCCTTTGCTGGCAG...AGGAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp GAGCAATGCCTGTGGGGCTGCTCACTGCCCCCAGACCTTCTGCACATGTGTGACGCAGCAGGGCCCCGTTaGTCGAGTCCAGTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: EQCLWGCSLPPDLLHMCDAAGPR*SSPVPA
Trigger: TGCAGGAACTGGACTCGAGCAACGGGGCCCTGCTGC...GTCACACATGTGCAGAAGGTCTGGGGGCAGTGAGCAGCCCCACAGGCATTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR CCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGAGTTCCTGCAGGGCCATaGGTTCCTCGAGGTTTTCCT +
Preference number: 2 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRVPAGP*VPRGFP
Trigger: AGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAAC...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR CCA 90 bp TCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCAATGTGGCCTCCAGGCCCCGCTTaGGCATGCTGCCCATACCCC +
Preference number: 2 (lower is better)
Translates to: SASAILLLGLTSSLGPMWPPGPA*ACCPYP
Trigger: GGGGTATGGGCAGCATGCCCAAGCGGGGCCTGGAGG...CCACATTGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR TCA 90 bp CTGCATGGCCTGCTCACCGTGCTCAAACTTCACCCCAGTGAGGCTGAACCTGACACACGTTGCGCCGGCTaGTCTTCAGGTCCCGCTGCT +
Preference number: 2 (lower is better)
Translates to: LHGLLTVLKLHPSEAEPDTRCAG*SSGPAA
Trigger: AGCAGCGGGACCTGAAGATCAGCCGGCGCAACGTGT...GTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAGCACGGTGAGCAGGCCATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR GCA 90 bp TCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCAATGTGGAGCCAGCTAGCCCGGTaGGACCCGCTGGCAGAAGCT +
Preference number: 2 (lower is better)
Translates to: SASAILLLGLTSSLGPMWSQLAR*DPLAEA
Trigger: AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCT...CCACATTGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp GGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCAGGTCCCGCTGCTTTGCCCCCAGACCTTCTaGACATGTGTGACTCCTGTG +
Preference number: 2 (lower is better)
Translates to: GPAVRQHVAPADLQVPLLCPQTF*TCVTPV
Trigger: CACAGGAGTCACACATGTGCAGAAGGTCTGGGGGCA...AAGCAGCGGGACCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR GCA 90 bp GATGGAGGGGCCTGGATGCACCCAGAGGCAACTGCTCATCTTCTGCTTGGCCAGTGTGGGGCTGCTCACTaGCCCCAGACCTTCTGCACA +
Preference number: 2 (lower is better)
Translates to: DGGAWMHPEATAHLLLGQCGAAH*PQTFCT
Trigger: TGTGCAGAAGGTCTGGGGGCAGTGAGCAGCCCCACA...CTGGCCAAGCAGAAGATGAGCAGTTGCCTCTGGGTGCATCCAGGCCCCTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp GCGGCAGGGTTTCCGTTCCACTCCCAGTCCCTGAGGGCCACAGGCGTGCAGGGCCAACTTGAAGCTGGATaGAGCCTTGCATGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: AAGFPFHSQSLRATGVQGQLEAG*SLACVL
Trigger: GAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTG...GCCCTGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGAACGGAAACCCTGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp TGCTCATCCTCCTGTCGCTCAAGGTCATTGTCTGTGGACCCCAGCTCAGCTCGGTCCCGAGCCCTAAGGTaGAGGGCAGAGCCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: CSSSCRSRSLSVDPSSARSRALR*RAEPVG
Trigger: TCCCACAGGCTCTGCCCTGCACCTTAGGGCTCGGGA...CCGAGCTGAGCTGGGGTCCACAGACAATGACCTTGAGCGACAGGAGGATGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR TCA 90 bp CCGCCCAGGCTCCAGGAATGCAAGTTCCCGCTCACAGGAAGACCAGGTAAGGGCGAAGCAGCACCAACTTaGAGCTGGATGCAGCCTTGC +
Preference number: 2 (lower is better)
Translates to: PPRLQECKFPLTGRPGKGEAAPT*SWMQPC
Trigger: GCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTC...GCCCTTACCTGGTCTTCCTGTGAGCGGGAACTTGCATTCCTGGAGCCTGGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp GATGGAGGGGCCTGGATGCACCCAGAGGCAACTGCTCATCTTCTGCTTGGCCAGAATCCAGGGGAGCAATaGCTGTGGGGCTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: DGGAWMHPEATAHLLLGQNPGEQ*LWGCSL
Trigger: CAGTGAGCAGCCCCACAGGCATTGCTCCCCTGGATT...CTGGCCAAGCAGAAGATGAGCAGTTGCCTCTGGGTGCATCCAGGCCCCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp AGCCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCATTAAGCCACCTGCCTaGGGCCTTCGCACTGGCTGT +
Preference number: 2 (lower is better)
Translates to: SLQATIRDVVIVCVLLILIKPPA*GLRTGC
Trigger: ACAGCCAGTGCGAAGGCCCCAGGCAGGTGGCTTAAT...GAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR CAA 90 bp GGCTGGGCTGCCGGGCCTGTCCTCCAAGGAAGAAGCAGCACCAACTaGAAGCTGGATGCAGCCTTGCATGTGTTCTCAGGTCTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: GWAAGPVLQGRSSTN*KLDAALHVFSGLLP
Trigger: AGGCAGAAGACCTGAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCTTCCTTGGAGGACAGGCCCGGCAGCCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR TCA 90 bp TGCTCATCCTCCTGTCGCTCAAGGTCATTGTCTGTGGACCCCAGCTCAGCTCGGGGAGCCCAGCTCAGGTaGGAGAAAGGTTCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: CSSSCRSRSLSVDPSSARGAQLR*EKGSAS
Trigger: AGAGGCTGAACCTTTCTCTCACCTGAGCTGGGCTCC...CCGAGCTGAGCTGGGGTCCACAGACAATGACCTTGAGCGACAGGAGGATGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp TCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCAATGTGGAGCTCAGTGCTCGTCTaGAGTGAAGGGTGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: SASAILLLGLTSSLGPMWSSVLV*SEGWPR
Trigger: CCTGGGCCACCCTTCACTGCAGACGAGCACTGAGCT...CCACATTGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GGGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCTCTTTGGGATCCTCTTaGGACAGCCAAGCAGAAAAG +
Preference number: 2 (lower is better)
Translates to: GMGHQDRPLQCGDMEALASLGSS*DSQAEK
Trigger: CTTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGA...GGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR TCA 90 bp ACCAACTTGAAGCTGGATGCAGCCTTGCATGTGTTCTCAGGTCTTCTGCCTCAGGTAGGCCTCCCGCAGTaGGATGAGGATCGGGTCGGC +
Preference number: 2 (lower is better)
Translates to: TNLKLDAALHVFSGLLPQVGLPQ*DEDRVG
Trigger: GCCGACCCGATCCTCATCTCACTGCGGGAGGCCTAC...CTGAGGCAGAAGACCTGAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR GCA 90 bp TTTCTCTTTGGGATCCTCTTGGGACAGCCAAGCAGAAAAGGCCAAGGCCTTATTTCCCCACCACGGGGCTaGCCCAGCGGCAGGGTTTCC +
Preference number: 2 (lower is better)
Translates to: FLFGILLGQPSRKGQGLISPPRG*PSGRVS
Trigger: GGAAACCCTGCCGCTGGGGCAGCCCCGTGGTGGGGA...AATAAGGCCTTGGCCTTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp TTTCTCTTTGGGATCCTCTTGGGACAGCCAAGCAGAAAAGGCCAAGGCCTTATTGCAGGGCCTCAGCACTaGCCCCTGCGCTCGCTGGTC +
Preference number: 2 (lower is better)
Translates to: FLFGILLGQPSRKGQGLIAGPQH*PLRSLV
Trigger: GACCAGCGAGCGCAGGGGGCAGTGCTGAGGCCCTGC...AATAAGGCCTTGGCCTTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp ACCAACTTGAAGCTGGATGCAGCCTTGCATGTGTTCTCAGGTCTTCTGCCTCAGCCCGGTGCGACCCGCTaGCAGAAGCTGAGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: TNLKLDAALHVFSGLLPQPGATR*QKLSGK
Trigger: CTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGG...CTGAGGCAGAAGACCTGAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp CTCAAACTTCACCCCAGTGAGGCTGAACCTGACCTTAACCTCTACCCTGATGTCAGCTGGTGTCAGGGCTaGCTCTCCCTGAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: LKLHPSEAEPDLNLYPDVSWCQG*LSLRPG
Trigger: CCCAGGCCTCAGGGAGAGCCAGCCCTGACACCAGCT...GACATCAGGGTAGAGGTTAAGGTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR TCA 90 bp AGAAGCAGCACCAACTTGAAGCTGGATGCAGCCTTGCATGTGTTCTCAGGTCTTCCTCCCGCAGTGAGATaGGGATCGGGTCGGCATCCC +
Preference number: 2 (lower is better)
Translates to: RSSTNLKLDAALHVFSGLPPAVR*GSGRHP
Trigger: GGGATGCCGACCCGATCCTCATCTCACTGCGGGAGG...AAGACCTGAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR GCA 90 bp AAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCAAATCCAGGGGAGCAATaGCTGTGGGGCTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: KGSASAILLLGLTSSLGPNPGEQ*LWGCSL
Trigger: CAGTGAGCAGCCCCACAGGCATTGCTCCCCTGGATT...TGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp TTCACCCCAGTGAGGCTGAACCTGACCTTAACCTCTACCCTGATGTCTATCACTCAGAGGGCTGGGCAGTaGTCGGGGAGATGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: FTPVRLNLTLTSTLMSITQRAGQ*SGRWSL
Trigger: GAGGGACCATCTCCCCGACCACTGCCCAGCCCTCTG...AGTGATAGACATCAGGGTAGAGGTTAAGGTCAGGTTCAGCCTCACTGGGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp TGCTCATCCTCCTGTCGCTCAAGGTCATTGTCTGTGGACCCCAGCTCAGCTCGGGAGGTCCGACTTTCTTaGCACAGTCATGACGATGGG +
Preference number: 2 (lower is better)
Translates to: CSSSCRSRSLSVDPSSAREVRLS*HSHDDG
Trigger: CCCATCGTCATGACTGTGCCAAGAAAGTCGGACCTC...CCGAGCTGAGCTGGGGTCCACAGACAATGACCTTGAGCGACAGGAGGATGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR CCA 90 bp TTTTCTCTTTGGGATCCTCTTGGGACAGCCAAGCAGAAAAGGCCAAGGCCTTATCTGGCAGAAGCTGAGTaGGAAGGGGGCGGCGGAGGA +
Preference number: 2 (lower is better)
Translates to: FSLWDPLGTAKQKRPRPYLAEAE*EGGGGG
Trigger: TCCTCCGCCGCCCCCTTCCCACTCAGCTTCTGCCAG...ATAAGGCCTTGGCCTTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGAGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp TTCACCCCAGTGAGGCTGAACCTGACCTTAACCTCTACCCTGATGTCTATCACTTGTGGGGCTGCTCACTaGCCCCAGACCTTCTGCACA +
Preference number: 2 (lower is better)
Translates to: FTPVRLNLTLTSTLMSITCGAAH*PQTFCT
Trigger: TGTGCAGAAGGTCTGGGGGCAGTGAGCAGCCCCACA...AGTGATAGACATCAGGGTAGAGGTTAAGGTCAGGTTCAGCCTCACTGGGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp TGCTCATCCTCCTGTCGCTCAAGGTCATTGTCTGTGGACCCCAGCTCAGCTCGGCAACTTGAAGCTGGATaGAGCCTTGCATGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: CSSSCRSRSLSVDPSSARQLEAG*SLACVL
Trigger: GAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTG...CCGAGCTGAGCTGGGGTCCACAGACAATGACCTTGAGCGACAGGAGGATGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp TTTCTCTTTGGGATCCTCTTGGGACAGCCAAGCAGAAAAGGCCAAGGCCTTATTCTGCCAGCAAAGGCGTaGAGGTCACTCAGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: FLFGILLGQPSRKGQGLILPAKA*RSLSRA
Trigger: GGCCCTGCTGAGTGACCTGCACGCCTTTGCTGGCAG...AATAAGGCCTTGGCCTTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CCA 90 bp GTGAGAGAAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTAGACGTAGACCACACTaGTGTCGGGGTCGTAGAAGG +
Preference number: 2 (lower is better)
Translates to: VRERFSLCHTPLRSHLFPRRRPH*CRGRRR
Trigger: CCTTCTACGACCCCGACACCAGTGTGGTCTACGTCT...AGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTTCTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR TCA 90 bp TTCACCCCAGTGAGGCTGAACCTGACCTTAACCTCTACCCTGATGTCTATCACTGAAGCAGCACCAACTTaGAGCTGGATGCAGCCTTGC +
Preference number: 2 (lower is better)
Translates to: FTPVRLNLTLTSTLMSITEAAPT*SWMQPC
Trigger: GCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTC...AGTGATAGACATCAGGGTAGAGGTTAAGGTCAGGTTCAGCCTCACTGGGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR GCA 90 bp AGAAGCAGCACCAACTTGAAGCTGGATGCAGCCTTGCATGTGTTCTCAGGTCTTAGCTGGATGCAGCCTTaGATGTGTTCTCAGGTCTTC +
Preference number: 2 (lower is better)
Translates to: RSSTNLKLDAALHVFSGLSWMQP*MCSQVF
Trigger: GAAGACCTGAGAACACATGCAAGGCTGCATCCAGCT...AAGACCTGAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR CCA 72 bp GGACCCCAGCTCAGCTCGGGCCTGCAGCCAGCGACCTaGGGGGCTGGCCCAGAGCAGGCGCCGCGTGCGGCC +
Preference number: 3 (lower is better)
Translates to: GPQLSSGLQPAT*GAGPEQAPRAA
Trigger: GGCCGCACGCGGCGCCTGCTCTGGGCCAGCCCCCCAGGTCGCTGGCTGCAGGCCCGAGCTGAGCTGGGGTCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR TCA 72 bp GGCGGGCCGGGTGGTAGTAGCCCCCTGAGTCACGGCTaGGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCA +
Preference number: 3 (lower is better)
Translates to: GGPGGSSPLSHG*GGARPVLGQWP
Trigger: TGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGACTCAGGGGGCTACTACCACCCGGCCCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR GCA 72 bp CCCAGCTGCTCCTCCAGGCGGCAGATGCGGTCGCCCTaGTCCTTGACCAGCGCCCTCAGGGCCCGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: PSCSSRRQMRSP*SLTSALRARSS
Trigger: GGAGCTGCGGGCCCTGAGGGCGCTGGTCAAGGAGCAGGGCGACCGCATCTGCCGCCTGGAGGAGCAGCTGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR CCA 72 bp CAGGGCCTCAGCACTGCCCCCTGCGCTCGCTGGTCCTaGGGAGCCGAGGACCAGGTCGCCCTCCGTGTCACT +
Preference number: 3 (lower is better)
Translates to: QGLSTAPCARWS*GAEDQVALRVT
Trigger: AGTGACACGGAGGGCGACCTGGTCCTCGGCTCCCCAGGACCAGCGAGCGCAGGGGGCAGTGCTGAGGCCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR GCA 72 bp TGGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCTaGTCCTCCAGGCGGCAGATGCGGTCGCCCTGCTCC +
Preference number: 3 (lower is better)
Translates to: WPYASPFSMRPS*SSRRQMRSPCS
Trigger: GGAGCAGGGCGACCGCATCTGCCGCCTGGAGGAGCAGCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR CCA 72 bp GGGGGCGGCGGAGGAGATGAAGGTGGCGTGTGGCTGTaGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: GGGGGDEGGVWL*PYASPFSMRPS
Trigger: GCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCCACCTTCATCTCCTCCGCCGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR-3UTR CAA 90 bp AGCTCCACAGGCCCAGACATTCTAGCCCCGACCGCCTGTGGCCCCCATCCCAAGCGGTCGCCCTGCTCCTaGACCAGCGCCCTCAGGGCC +
Preference number: 3 (lower is better)
Translates to: SSTGPDILAPTACGPHPKRSPCS*TSALRA
Trigger: GGCCCTGAGGGCGCTGGTCAAGGAGCAGGGCGACCG...CTTGGGATGGGGGCCACAGGCGGTCGGGGCTAGAATGTCTGGGCCTGTGGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR TCA 72 bp GTCCCGCTGCTTGCTGGGCACGTAGGCCTCCCGCAGTaGGATGAGGATCGGGTCGGCATCCCGCCCGCTCAC +
Preference number: 3 (lower is better)
Translates to: VPLLAGHVGLPQ*DEDRVGIPPAH
Trigger: GTGAGCGGGCGGGATGCCGACCCGATCCTCATCTCACTGCGGGAGGCCTACGTGCCCAGCAAGCAGCGGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR GCA 72 bp GCTCCGAGGCTTACCATTGGTCCGCAGGCCCCTCCGTaGCGGGCACCCACCTCCAGCTCTGGCTGTGTCGAG +
Preference number: 3 (lower is better)
Translates to: APRLTIGPQAPP*RAPTSSSGCVE
Trigger: CTCGACACAGCCAGAGCTGGAGGTGGGTGCCCGGCACGGAGGGGCCTGCGGACCAATGGTAAGCCTCGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR GCA 72 bp CAAAGGCGTGCAGGTCACTCAGCAGGGCCTCAGCACTaGCCCCTGCGCTCGCTGGTCCTGGGGAGCCGAGGA +
Preference number: 3 (lower is better)
Translates to: QRRAGHSAGPQH*PLRSLVLGSRG
Trigger: TCCTCGGCTCCCCAGGACCAGCGAGCGCAGGGGGCAGTGCTGAGGCCCTGCTGAGTGACCTGCACGCCTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR GCA 72 bp GCGTGTGGCTGTGGCCCTACGCATCCCCGTTCTCCATaGGGCCCAGCTGCTCCTCCAGGCGGCAGATGCGGT +
Preference number: 3 (lower is better)
Translates to: ACGCGPTHPRSP*GPAAPPGGRCG
Trigger: ACCGCATCTGCCGCCTGGAGGAGCAGCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR CCA 72 bp CAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTaGGAAGGGGGCGGCGGAGGAGATGAAGGTGGCGTG +
Preference number: 3 (lower is better)
Translates to: QLARCDPLAEAE*EGGGGGDEGGV
Trigger: CACGCCACCTTCATCTCCTCCGCCGCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR CCA 72 bp AGCCGAGGACCAGGTCGCCCTCCGTGTCACTGTCTCTaGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: SRGPGRPPCHCL*LPQPARGPALG
Trigger: GCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACGGAGGGCGACCTGGTCCTCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CAA 90 bp CTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGACGCCTCTCCACATGGACGCCTCTCCACATaGCTGCTCGCCTTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: LASSARTGTCSGLDASPHGRLST*LLAFPR
Trigger: CCTGGGGAAGGCGAGCAGCAATGTGGAGAGGCGTCC...ATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CAA 90 bp GGGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCGGCAGCAGGGCCCCGTaGCTCGAGTCCAGTTCCTGC +
Preference number: 3 (lower is better)
Translates to: GMGHQDRPLQCGDMEALAGSRAP*LESSSC
Trigger: GCAGGAACTGGACTCGAGCAACGGGGCCCTGCTGCC...GGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR TCA 72 bp GCTGCTTGCTGGGCACGTAGGCCTCCCGCAGTGAGATaGGGATCGGGTCGGCATCCCGCCCGCTCACCCACT +
Preference number: 3 (lower is better)
Translates to: AACWARRPPAVR*GSGRHPARSPT
Trigger: AGTGGGTGAGCGGGCGGGATGCCGACCCGATCCTCATCTCACTGCGGGAGGCCTACGTGCCCAGCAAGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR CCA 72 bp TGGGAAGGGGGCGGCGGAGGAGATGAAGGTGGCGTGTaGCTGTGGCCCTACGCATCCCCGTTCTCCATGCGG +
Preference number: 3 (lower is better)
Translates to: WEGGGGGDEGGV*LWPYASPFSMR
Trigger: CCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCCACCTTCATCTCCTCCGCCGCCCCCTTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
3UTR TCA 72 bp CCAGCAGTAGGAGCAGCAGCAGCAGCAGGACAACGGTaGCAGAGCTGGAGCCCACGCTGTCCTCCGCGCTGC +
Preference number: 3 (lower is better)
Translates to: PAVGAAAAAGQR*QSWSPRCPPRC
Trigger: GCAGCGCGGAGGACAGCGTGGGCTCCAGCTCTGTCACCGTTGTCCTGCTGCTGCTGCTGCTCCTACTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR CCA 72 bp GGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTaGGCGCTGGCTTCGGCCTGGGCCTGGGACGGGTGG +
Preference number: 3 (lower is better)
Translates to: GVDILHRNSEES*ALASAWAWDGW
Trigger: CCACCCGTCCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR CCA 72 bp CCACACCAGACCCTCCCCAGTCTCTCTGGAGGAGGCTaGGCTGCCGGGCCTGTCCTCCAAGGAAGAAGCAGC +
Preference number: 3 (lower is better)
Translates to: PHQTLPSLSGGG*AAGPVLQGRSS
Trigger: GCTGCTTCTTCCTTGGAGGACAGGCCCGGCAGCCCAGCCTCCTCCAGAGAGACTGGGGAGGGTCTGGTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR CCA 72 bp GTCTCTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTaGGCTGGACGCCTCTCCACATTGCTGCTCGCCTTC +
Preference number: 3 (lower is better)
Translates to: VSGFLSPHGDLL*AGRLSTLLLAF
Trigger: GAAGGCGAGCAGCAATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CAA 90 bp CGTGTCACTGTCTCTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGATTCTCAGCCCCACCCTaGCAGCAGCAGGTCAGCCTG +
Preference number: 3 (lower is better)
Translates to: RVTVSGFLSPHGDLLWAGFSAPP*QQQVSL
Trigger: CAGGCTGACCTGCTGCTGCAAGGGTGGGGCTGAGAA...TCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR TCA 72 bp AGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTaGGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: SSPGRRHPPQEQ*GKLGAGFGLGL
Trigger: CAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
3UTR GCA 72 bp TCACTGTCTCTGGCTTCCTCAGCCCGCACGGGGACCTaGTCTGGGCTGGACGCCTCTCCACATTGCTGCTCG +
Preference number: 3 (lower is better)
Translates to: SLSLASSARTGT*SGLDASPHCCS
Trigger: CGAGCAGCAATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CAA 90 bp CCAGGTAAGGGCCTTCCCAGGGCTCCTGACAGGGGCCTGGTCCGGTATGGGGTGCTGTCAGACAACACGTaGCGCCGGCTGATCTTCAGG +
Preference number: 3 (lower is better)
Translates to: PGKGLPRAPDRGLVRYGVLSDNT*RRLIFR
Trigger: CCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAG...CACCCCATACCGGACCAGGCCCCTGTCAGGAGCCCTGGGAAGGCCCTTACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
3UTR-3UTR CAA 90 bp CTGCATGGCCTGCTCACCGTGCTCAAACTTCACCCCAGTGAGGCTGAACCTGACTTCTCAGCCCCACCCTaGCAGCAGCAGGTCAGCCTG +
Preference number: 3 (lower is better)
Translates to: LHGLLTVLKLHPSEAEPDFSAPP*QQQVSL
Trigger: CAGGCTGACCTGCTGCTGCAAGGGTGGGGCTGAGAA...GTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAGCACGGTGAGCAGGCCATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CAA 90 bp CTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGACGCCTCTCCACATAAGCTGGATGCAGCCTaGCATGTGTTCTCAGGTCTT +
Preference number: 3 (lower is better)
Translates to: LASSARTGTCSGLDASPHKLDAA*HVFSGL
Trigger: AAGACCTGAGAACACATGCAAGGCTGCATCCAGCTT...ATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR TCA 72 bp TGTCGAGCGAGAAGTGAGCTCAGTGCTCGTCTGCAGTaGAGGGTGGCCCAGGCTTCCGCTTCCTGCCCACAT +
Preference number: 3 (lower is better)
Translates to: CRARSELSARLQ*RVAQASASCPH
Trigger: ATGTGGGCAGGAAGCGGAAGCCTGGGCCACCCTTCACTGCAGACGAGCACTGAGCTCACTTCTCGCTCGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR TCA 72 bp ATCTTGGGAAGCAGAGGCACGGGGAGTGAGCGGCTGTaGCAGGGATGGGACACCAAGACCGGCCTCTACAGT +
Preference number: 3 (lower is better)
Translates to: ILGSRGTGSERL*QGWDTKTGLYS
Trigger: ACTGTAGAGGCCGGTCTTGGTGTCCCATCCCTGTCACAGCCGCTCACTCCCCGTGCCTCTGCTTCCCAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CAA 90 bp AAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCACTCCGAGGCTTACCATaGGTCCGCAGGCCCCTCCGT +
Preference number: 3 (lower is better)
Translates to: KGSASAILLLGLTSSLGPLRGLP*VRRPLR
Trigger: ACGGAGGGGCCTGCGGACCAATGGTAAGCCTCGGAG...TGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CAA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGAAGCTGGATGCAGCCTaGCATGTGTTCTCAGGTCTT +
Preference number: 3 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQKLDAA*HVFSGL
Trigger: AAGACCTGAGAACACATGCAAGGCTGCATCCAGCTT...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR GCA 72 bp AATGCCTGTGGGGCTGCTCACTGCCCCCAGACCTTCTaGACATGTGTGACTCCTGTGACATCCTCTGTCTCC +
Preference number: 3 (lower is better)
Translates to: NACGAAHCPQTF*TCVTPVTSSVS
Trigger: GGAGACAGAGGATGTCACAGGAGTCACACATGTGCAGAAGGTCTGGGGGCAGTGAGCAGCCCCACAGGCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR GCA 72 bp GGGAGCCCAGCTCAGGTGAGAGAAAGGTTCAGCCTCTaGCATACTCCTCTTAGGTCTCACCTCTTCCCTGGG +
Preference number: 3 (lower is better)
Translates to: GSPAQVRERFSL*HTPLRSHLFPG
Trigger: CCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTTCTCTCACCTGAGCTGGGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR CCA 72 bp AGAAAAGGCCAAGGCCTTATTTGGTCAACCAGGCTCTaGCCCTGTGAGATCAGCCCCCATCCCTCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: RKGQGLIWSTRL*PCEISPHPSSL
Trigger: GAGGCTGGAGGGATGGGGGCTGATCTCACAGGGCCAGAGCCTGGTTGACCAAATAAGGCCTTGGCCTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR-3UTR CAA 90 bp CTGCATGGCCTGCTCACCGTGCTCAAACTTCACCCCAGTGAGGCTGAACCTGACCTCTTTGGGATCCTCTaGGGACAGCCAAGCAGAAAA +
Preference number: 3 (lower is better)
Translates to: LHGLLTVLKLHPSEAEPDLFGIL*GQPSRK
Trigger: TTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGAG...GTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAGCACGGTGAGCAGGCCATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCGGTCGCCCTGCTCCTTaGCCAGCGCCCTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGGRPAP*PAPSGP
Trigger: GGGCCCTGAGGGCGCTGGTCAAGGAGCAGGGCGACC...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCCGCTGTCCTCCGCGCTaGCACCCGAGCCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGRCPPR*HPSPRP
Trigger: GGGCCTTGGGCTCGGGTGGCAGCGCGGAGGACAGCG...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GGTGGGAGGAGCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCGGAGGCGGGCGCAGCTaGCAGAGGAAGTCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: GGRSPGPWRAGCQTTRCAGGGRS*QRKSAV
Trigger: GACCGCAGACTTCCTCTGGCAGCTGCGCCCGCCTCC...GGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGCTCCTCCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR GCA 90 bp TCCATGCGGCCCAGCTGCTCCTCCAGGCGGCAGATGCGGTCGCCCTGCTCCTTGCGCTGTCCTCCGCGCTaGCACCCGAGCCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: SMRPSCSSRRQMRSPCSLRCPPR*HPSPRP
Trigger: GGGCCTTGGGCTCGGGTGGCAGCGCGGAGGACAGCG...CAAGGAGCAGGGCGACCGCATCTGCCGCCTGGAGGAGCAGCTGGGCCGCATGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR CCA 90 bp GGTGGGAGGAGCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCCATCTGCCAGGAAGATaGCCCGCATGGGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: GGRSPGPWRAGCQTTRCAHLPGR*PAWAGP
Trigger: GGGCCCGGCCCATGCGGGCCATCTTCCTGGCAGATG...GGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGCTCCTCCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CAGAGCTGGAGCCCACGCTGTCCTCCGCGCTGCCACCCGAGCCCAAGGCCCCTGGGTCCCGCTGCTTGCTaGGCACGTAGGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: QSWSPRCPPRCHPSPRPLGPAAC*ARRPPA
Trigger: TGCGGGAGGCCTACGTGCCCAGCAAGCAGCGGGACC...CAGGGGCCTTGGGCTCGGGTGGCAGCGCGGAGGACAGCGTGGGCTCCAGCTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCAGGAGCCCGGGGCCATaGCGGGCCGGCTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGRSPGP*RAGCQT
Trigger: TGTCTGACAGCCGGCCCGCCATGGCCCCGGGCTCCT...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp GGTGGGAGGAGCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCCAGCAGCAGTGGTGGTaGAGGCGGGGGCCCCTAGGT +
Preference number: 4 (lower is better)
Translates to: GGRSPGPWRAGCQTTRCAQQQWW*RRGPLG
Trigger: ACCTAGGGGCCCCCGCCTCCACCACCACTGCTGCTG...GGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGCTCCTCCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CAGAGCTGGAGCCCACGCTGTCCTCCGCGCTGCCACCCGAGCCCAAGGCCCCTGGCCTGGGATGGGGGATaGAGGGGCCTGGATGCACCC +
Preference number: 4 (lower is better)
Translates to: QSWSPRCPPRCHPSPRPLAWDGG*RGLDAP
Trigger: GGGTGCATCCAGGCCCCTCCATCCCCCATCCCAGGC...CAGGGGCCTTGGGCTCGGGTGGCAGCGCGGAGGACAGCGTGGGCTCCAGCTCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CCCCCTGAGTCACGGCTGAGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCAGCGCTCTCCCTGAGGCCTaGGATGGGGGATGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PPESRLRRRQASARPVASALPEA*DGGWRG
Trigger: GCCCCTCCATCCCCCATCCCAGGCCTCAGGGAGAGC...GCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGACTCAGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp CAGAGCTGGAGCCCACGCTGTCCTCCGCGCTGCCACCCGAGCCCAAGGCCCCTGGTAGGCCTCCCGCAGTaGGATGAGGATCGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: QSWSPRCPPRCHPSPRPLVGLPQ*DEDRVG
Trigger: GCCGACCCGATCCTCATCTCACTGCGGGAGGCCTAC...CAGGGGCCTTGGGCTCGGGTGGCAGCGCGGAGGACAGCGTGGGCTCCAGCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGGCCCCGCTTGGGCATaGTGCCCATACCCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: ASEALGSQLARCDPLAEAGPAWA*CPYPAA
Trigger: CGCAGCGGGGTATGGGCAGCATGCCCAAGCGGGGCC...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTGCCCGCACGGGGACCTaGTCTGGGCTGGACGCCTCT +
Preference number: 4 (lower is better)
Translates to: ARGHGGPAVRQHVAPADLARTGT*SGLDAS
Trigger: AGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGC...AAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR CCA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCAGGAAAGCTGGGCGCTaGCTTCGGCCTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGRKAGR*LRPGPG
Trigger: CCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCT...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp GGTGGGAGGAGCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCCAGAGGGCTGGGCAGTaGTCGGGGAGATGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GGRSPGPWRAGCQTTRCAQRAGQ*SGRWSL
Trigger: GAGGGACCATCTCCCCGACCACTGCCCAGCCCTCTG...GGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGCTCCTCCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CCCCCTGAGTCACGGCTGAGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCAGCAGCTGGTGTCAGGGCTaGCTCTCCCTGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PPESRLRRRQASARPVASSWCQG*LSLRPG
Trigger: CCCAGGCCTCAGGGAGAGCCAGCCCTGACACCAGCT...GCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGACTCAGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCCAGATGCGGTCGCCCTaGTCCTTGACCAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGQMRSP*SLTSAL
Trigger: GAGGGCGCTGGTCAAGGAGCAGGGCGACCGCATCTG...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp TCACGGCTGAGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCAGCAGTAGGAGCTGGTCCGGTATGGGGTaGTGGGGGCCAGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SRLRRRQASARPVASSRSWSGMG*WGPGLE
Trigger: CTCCAGGCCTGGCCCCCAGCACCCCATACCGGACCA...GCTCCTACTGCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TCCATGCGGCCCAGCTGCTCCTCCAGGCGGCAGATGCGGTCGCCCTGCTCCTTGGGAGGGGTGCTGAGGTaGAGCCAGCCTCCCCCACCA +
Preference number: 4 (lower is better)
Translates to: SMRPSCSSRRQMRSPCSLGGVLR*SQPPPP
Trigger: TGGTGGGGGAGGCTGGCTGCACCTCAGCACCCCTCC...CAAGGAGCAGGGCGACCGCATCTGCCGCCTGGAGGAGCAGCTGGGCCGCATGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR GCA 90 bp CCAGGTAAGGGCCTTCCCAGGGCTCCTGACAGGGGCCTGGTCCGGTATGGGGTGTCCCCACCACGGGGCTaGCCCAGCGGCAGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PGKGLPRAPDRGLVRYGVSPPRG*PSGRVS
Trigger: GGAAACCCTGCCGCTGGGGCAGCCCCGTGGTGGGGA...CACCCCATACCGGACCAGGCCCCTGTCAGGAGCCCTGGGAAGGCCCTTACCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CCCCCTGAGTCACGGCTGAGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCAGCGACGCCTCTCCACATTaGTGCTCGCCTTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PPESRLRRRQASARPVASDASPH*CSPSPG
Trigger: CCCTGGGGAAGGCGAGCAGCAATGTGGAGAGGCGTC...GCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGACTCAGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CCCCCTGAGTCACGGCTGAGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCAGCGACCGGCCTCTACAGTaGGGTGACATGGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PPESRLRRRQASARPVASDRPLQ*GDMEAL
Trigger: CAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTC...GCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGACTCAGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTCATCTGCCAGGAAGATaGCCCGCATGGGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: ASEALGSQLARCDPLAEAHLPGR*PAWAGP
Trigger: GGGCCCGGCCCATGCGGGCCATCTTCCTGGCAGATG...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGGTCCCGCTGCTTGCTaGGCACGTAGGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: ASEALGSQLARCDPLAEAGPAAC*ARRPPA
Trigger: TGCGGGAGGCCTACGTGCCCAGCAAGCAGCGGGACC...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGACGCCTCTCCACATAGGAGCCCGGGGCCATaGCGGGCCGGCTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: LASSARTGTCSGLDASPHRSPGP*RAGCQT
Trigger: TGTCTGACAGCCGGCCCGCCATGGCCCCGGGCTCCT...ATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CCCAGCGGCAGGGTTTCCGTTCCACTCCCAGTCCCTGAGGGCCACAGGCGTGCAAGGAGCCCGGGGCCATaGCGGGCCGGCTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: PSGRVSVPLPVPEGHRRARSPGP*RAGCQT
Trigger: TGTCTGACAGCCGGCCCGCCATGGCCCCGGGCTCCT...TGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGAACGGAAACCCTGCCGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp TCCATGCGGCCCAGCTGCTCCTCCAGGCGGCAGATGCGGTCGCCCTGCTCCTTGTGGGACGGGTGGGGGTaGGAACTGACCCCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: SMRPSCSSRRQMRSPCSLWDGWG*ELTPAL
Trigger: CAGCGCAGGGGTCAGTTCCCACCCCCACCCGTCCCA...CAAGGAGCAGGGCGACCGCATCTGCCGCCTGGAGGAGCAGCTGGGCCGCATGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp GCGGCAGGGTTTCCGTTCCACTCCCAGTCCCTGAGGGCCACAGGCGTGCAGGGCTGGGCCTGGGACGGGTaGGGGTGGGAACTGACCCCT +
Preference number: 4 (lower is better)
Translates to: AAGFPFHSQSLRATGVQGWAWDG*GWELTP
Trigger: AGGGGTCAGTTCCCACCCCCACCCGTCCCAGGCCCA...GCCCTGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGAACGGAAACCCTGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCGAGGGAGCAGAGGGCTaGGCAGTGGTCGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGEGAEG*AVVGEM
Trigger: CATCTCCCCGACCACTGCCCAGCCCTCTGCTCCCTC...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CCCAAGGCCCCTGGCAGGGCCAGCAGCATCCCGAGCCCTAAGGTGCAGGGCAGATCCGGTATGGGGTGCTaGGGGCCAGGCCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PKAPGRASSIPSPKVQGRSGMGC*GPGLES
Trigger: GGACTCCAGGCCTGGCCCCCAGCACCCCATACCGGA...TCTGCCCTGCACCTTAGGGCTCGGGATGCTGCTGGCCCTGCCAGGGGCCTTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACGGGCCTGGTCCGGTATaGGGTGCTGGGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDGPGPV*GAGGQA
Trigger: GGCCTGGCCCCCAGCACCCCATACCGGACCAGGCCC...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp GGTGGGAGGAGCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCCCAGGAACTTGGGGTTaGCGGCGCAGAAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GGRSPGPWRAGCQTTRCAPGTWG*RRRRCC
Trigger: ACAGCACCTTCTGCGCCGTCAACCCCAAGTTCCTGG...GGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGCTCCTCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp TCCATGCGGCCCAGCTGCTCCTCCAGGCGGCAGATGCGGTCGCCCTGCTCCTTGTGTCGCAGCCTGCACTaGGCAGCACGTTTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: SMRPSCSSRRQMRSPCSLCRSLH*AARFGP
Trigger: CGGCCCGAAACGTGCTGCTCAGTGCAGGCTGCGACA...CAAGGAGCAGGGCGACCGCATCTGCCGCCTGGAGGAGCAGCTGGGCCGCATGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp ATGCGGCCCAGCTGCTCCTCCAGGCGGCAGATGCGGTCGCCCTGCTCCTTGACCCCTCCCGCAGTGAGATaGGGATCGGGTCGGCATCCC +
Preference number: 4 (lower is better)
Translates to: MRPSCSSRRQMRSPCSLTPPAVR*GSGRHP
Trigger: GGGATGCCGACCCGATCCTCATCTCACTGCGGGAGG...GGTCAAGGAGCAGGGCGACCGCATCTGCCGCCTGGAGGAGCAGCTGGGCCGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp GAAGGTGGCGTGTGGCTGTGGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCGGTGGGGGTGGGAACTaGCCCCTGCGCTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: EGGVWLWPYASPFSMRPSGGGGN*PLRCLR
Trigger: TCTGAGGCAGCGCAGGGGTCAGTTCCCACCCCCACC...GCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCCACCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp AGGCCCAGACATTCTAGCCCCGACCGCCTGTGGCCCCCATCCCAAGAACCCGGGAGCCTTCTCCCGCTCTaGCACCAGGGTGCCCCGACG +
Preference number: 4 (lower is better)
Translates to: RPRHSSPDRLWPPSQEPGSLLPL*HQGAPT
Trigger: CGTCGGGGCACCCTGGTGGCAGAGCGGGAGAAGGCT...CCCGGGTTCTTGGGATGGGGGCCACAGGCGGTCGGGGCTAGAATGTCTGGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTTCAGGTCCCGCTGCTTaGTGGGCACGTAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: ASEALGSQLARCDPLAEASGPAA*WARRPP
Trigger: GGGAGGCCTACGTGCCCAGCAAGCAGCGGGACCTGA...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp TCCATGCGGCCCAGCTGCTCCTCCAGGCGGCAGATGCGGTCGCCCTGCTCCTTGTCCATGCGGCCCAGCTaGTCCTCCAGGCGGCAGATG +
Preference number: 4 (lower is better)
Translates to: SMRPSCSSRRQMRSPCSLSMRPS*SSRRQM
Trigger: CATCTGCCGCCTGGAGGAGCAGCTGGGCCGCATGGA...CAAGGAGCAGGGCGACCGCATCTGCCGCCTGGAGGAGCAGCTGGGCCGCATGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCAGGTCTCCCCACCACGGGGCTaGCCCAGCGGCAGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: GHGGPAVRQHVAPADLQVSPPRG*PSGRVS
Trigger: GGAAACCCTGCCGCTGGGGCAGCCCCGTGGTGGGGA...GACCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR CCA 90 bp GAAGGTGGCGTGTGGCTGTGGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCGGTCCCGCTGCTTGCTaGGCACGTAGGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: EGGVWLWPYASPFSMRPSGPAAC*ARRPPA
Trigger: TGCGGGAGGCCTACGTGCCCAGCAAGCAGCGGGACC...GCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCCACCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CCAGGTAAGGGCCTTCCCAGGGCTCCTGACAGGGGCCTGGTCCGGTATGGGGTGCAGCAGCAGTGGTGGTaGAGGCGGGGGCCCCTAGGT +
Preference number: 4 (lower is better)
Translates to: PGKGLPRAPDRGLVRYGVQQQWW*RRGPLG
Trigger: ACCTAGGGGCCCCCGCCTCCACCACCACTGCTGCTG...CACCCCATACCGGACCAGGCCCCTGTCAGGAGCCCTGGGAAGGCCCTTACCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTCATCAGCAGCAGTGGTaGTGGAGGCGGGGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: ASEALGSQLARCDPLAEAHQQQW*WRRGPL
Trigger: TAGGGGCCCCCGCCTCCACCACCACTGCTGCTGATG...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTCTGGCAGAAGCTGAGTaGGAAGGGGGCGGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: ASEALGSQLARCDPLAEALAEAE*EGGGGG
Trigger: TCCTCCGCCGCCCCCTTCCCACTCAGCTTCTGCCAG...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CCCAAGGCCCCTGGCAGGGCCAGCAGCATCCCGAGCCCTAAGGTGCAGGGCAGACCCGGTGCGACCCGCTaGCAGAAGCTGAGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PKAPGRASSIPSPKVQGRPGATR*QKLSGK
Trigger: CTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGG...TCTGCCCTGCACCTTAGGGCTCGGGATGCTGCTGGCCCTGCCAGGGGCCTTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACGCTTCGGCCTGGGCCTaGGACGGGTGGGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDASAWA*DGWGWE
Trigger: TTCCCACCCCCACCCGTCCCAGGCCCAGGCCGAAGC...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTCAGAGGGCTGGGCAGTaGTCGGGGAGATGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ASEALGSQLARCDPLAEAQRAGQ*SGRWSL
Trigger: GAGGGACCATCTCCCCGACCACTGCCCAGCCCTCTG...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGACGCCTCTCCACATAGCCCCGACCGCCTGTaGCCCCCATCCCAAGAACCC +
Preference number: 4 (lower is better)
Translates to: LASSARTGTCSGLDASPHSPDRL*PPSQEP
Trigger: GGGTTCTTGGGATGGGGGCCACAGGCGGTCGGGGCT...ATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR CAA 72 bp CCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTaGCGCCGGCTGATCTTCAGGTCCCGCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PGAMAGRLSDNT*RRLIFRSRCLL
Trigger: CAGCAAGCAGCGGGACCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp GCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTGGATCTGCCACACCATaGCCGTGCAGTCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: ARGHGGPAVRQHVAPADLGSATP*PCSPPS
Trigger: GCTCGGAGGACTGCACGGTCATGGTGTGGCAGATCC...AAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGACGCCTCTCCACATCCCGACGGGGGTCGATaGTGCGCACGCTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LASSARTGTCSGLDASPHPDGGR*CARSCP
Trigger: AGGACAAGAGCGTGCGCATCATCGACCCCCGTCGGG...ATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp TCGCTGGTCCTGGGGAGCCGAGGACCAGGTCGCCCTCCGTGTCACTGTCTCTGGCCTCCCGCAGTGAGATaGGGATCGGGTCGGCATCCC +
Preference number: 4 (lower is better)
Translates to: SLVLGSRGPGRPPCHCLWPPAVR*GSGRHP
Trigger: GGGATGCCGACCCGATCCTCATCTCACTGCGGGAGG...CCAGAGACAGTGACACGGAGGGCGACCTGGTCCTCGGCTCCCCAGGACCAGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTACACGTTGCGCCGGCTaGTCTTCAGGTCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: ASEALGSQLARCDPLAEATRCAG*SSGPAA
Trigger: AGCAGCGGGACCTGAAGATCAGCCGGCGCAACGTGT...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACGGTGGGGGTGGGAACTaGCCCCTGCGCTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDGGGGN*PLRCLR
Trigger: TCTGAGGCAGCGCAGGGGTCAGTTCCCACCCCCACC...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp GGCGTGTGGCTGTGGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCTGCTCCCCTCCACAGGAACAGTaGGGAAAGCTGGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GVWLWPYASPFSMRPSCSPPQEQ*GKLGAG
Trigger: GCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGG...GGAGCAGCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CAGAGCTGGAGCCCACGCTGTCCTCCGCGCTGCCACCCGAGCCCAAGGCCCCTGGGAGCCCAGCTCAGGTaGGAGAAAGGTTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: QSWSPRCPPRCHPSPRPLGAQLR*EKGSAS
Trigger: AGAGGCTGAACCTTTCTCTCACCTGAGCTGGGCTCC...CAGGGGCCTTGGGCTCGGGTGGCAGCGCGGAGGACAGCGTGGGCTCCAGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCCTCGAGTCCAGTTCCTaGAGGGCCATGGGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGLESSS*RAMGSS
Trigger: CGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAG...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GGCGTGTGGCTGTGGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCTGCTCCGCAGCAGGGCCCCGTTaGTCGAGTCCAGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GVWLWPYASPFSMRPSCSAAGPR*SSPVPA
Trigger: TGCAGGAACTGGACTCGAGCAACGGGGCCCTGCTGC...GGAGCAGCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCTGCCCATACCCCGCTaGGGCTCCTTGCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: ARGHGGPAVRQHVAPADLLPIPR*GSLLVN
Trigger: GTTCACCAGCAAGGAGCCGCAGCGGGGTATGGGCAG...AAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGACGCCTCTCCACATTCCATGCGGCCCAGCTaGTCCTCCAGGCGGCAGATG +
Preference number: 4 (lower is better)
Translates to: LASSARTGTCSGLDASPHSMRPS*SSRRQM
Trigger: CATCTGCCGCCTGGAGGAGCAGCTGGGCCGCATGGA...ATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTCATCCCCGTTCTCCATaGGGCCCAGCTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ASEALGSQLARCDPLAEAHPRSP*GPAAPP
Trigger: TGGAGGAGCAGCTGGGCCGCATGGAGAACGGGGATG...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GGGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCCTGCCCCTCCCTGCTaGAGGACCCCTGGTCCACAC +
Preference number: 4 (lower is better)
Translates to: GMGHQDRPLQCGDMEALAPAPPC*RTPGPH
Trigger: GTGTGGACCAGGGGTCCTGCAGCAGGGAGGGGCAGG...GGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACCCTGCCCCTCCCTGCTaGAGGACCCCTGGTCCACAC +
Preference number: 4 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDPAPPC*RTPGPH
Trigger: GTGTGGACCAGGGGTCCTGCAGCAGGGAGGGGCAGG...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACTCAGCACTGCCCCCTaGGCTCGCTGGTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRLSTAP*ARWSWG
Trigger: TCCCCAGGACCAGCGAGCGCAGGGGGCAGTGCTGAG...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCAGGTCCTCAGCACTGCCCCCTaGGCTCGCTGGTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GHGGPAVRQHVAPADLQVLSTAP*ARWSWG
Trigger: TCCCCAGGACCAGCGAGCGCAGGGGGCAGTGCTGAG...GACCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR CCA 90 bp GGGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCATCTGCCAGGAAGATaGCCCGCATGGGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: GMGHQDRPLQCGDMEALAHLPGR*PAWAGP
Trigger: GGGCCCGGCCCATGCGGGCCATCTTCCTGGCAGATG...GGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp TCCGTGTCACTGTCTCTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGCCTCCAGGCCCCGCTTaGGCATGCTGCCCATACCCC +
Preference number: 4 (lower is better)
Translates to: SVSLSLASSARTGTCSGLPPGPA*ACCPYP
Trigger: GGGGTATGGGCAGCATGCCCAAGCGGGGCCTGGAGG...CAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp TGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCAGGAGCCCGGGGCCATaGCGGGCCGGCTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: WSGRWSLRGRGARLGVDIRSPGP*RAGCQT
Trigger: TGTCTGACAGCCGGCCCGCCATGGCCCCGGGCTCCT...GATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACCAGCAGCAGTGGTGGTaGAGGCGGGGGCCCCTAGGT +
Preference number: 4 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDQQQWW*RRGPLG
Trigger: ACCTAGGGGCCCCCGCCTCCACCACCACTGCTGCTG...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp GAAGGTGGCGTGTGGCTGTGGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCCTGGCAGAAGCTGAGTaGGAAGGGGGCGGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: EGGVWLWPYASPFSMRPSLAEAE*EGGGGG
Trigger: TCCTCCGCCGCCCCCTTCCCACTCAGCTTCTGCCAG...GCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCCACCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp GGGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCTGGGACGGGTGGGGGTaGGAACTGACCCCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: GMGHQDRPLQCGDMEALAWDGWG*ELTPAL
Trigger: CAGCGCAGGGGTCAGTTCCCACCCCCACCCGTCCCA...GGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp AAGCTGAGTGGGAAGGGGGCGGCGGAGGAGATGAAGGTGGCGTGTGGCTGTGGCTGGGCCTGGGACGGGTaGGGGTGGGAACTGACCCCT +
Preference number: 4 (lower is better)
Translates to: KLSGKGAAEEMKVACGCGWAWDG*GWELTP
Trigger: AGGGGTCAGTTCCCACCCCCACCCGTCCCAGGCCCA...GCCACAGCCACACGCCACCTTCATCTCCTCCGCCGCCCCCTTCCCACTCAGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp AGCTCCACAGGCCCAGACATTCTAGCCCCGACCGCCTGTGGCCCCCATCCCAAGAGGAAAGCTGGGCGCTaGCTTCGGCCTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSTGPDILAPTACGPHPKRKAGR*LRPGPG
Trigger: CCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCT...CTTGGGATGGGGGCCACAGGCGGTCGGGGCTAGAATGTCTGGGCCTGTGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CCCAGCGGCAGGGTTTCCGTTCCACTCCCAGTCCCTGAGGGCCACAGGCGTGCAGGGGAGCAATGCCTGTaGGGCTGCTCACTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PSGRVSVPLPVPEGHRRAGEQCL*GCSLPP
Trigger: TGGGGGCAGTGAGCAGCCCCACAGGCATTGCTCCCC...TGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGAACGGAAACCCTGCCGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp AAGCTGAGTGGGAAGGGGGCGGCGGAGGAGATGAAGGTGGCGTGTGGCTGTGGCTCGGAACAGGCTAGGTaGGGGGTGTCGGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: KLSGKGAAEEMKVACGCGSEQAR*GVSGEG
Trigger: CCCCTCCCCCGACACCCCCCACCTAGCCTGTTCCGA...GCCACAGCCACACGCCACCTTCATCTCCTCCGCCGCCCCCTTCCCACTCAGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTCCAGGAACTTGGGGTTaGCGGCGCAGAAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: ASEALGSQLARCDPLAEAPGTWG*RRRRCC
Trigger: ACAGCACCTTCTGCGCCGTCAACCCCAAGTTCCTGG...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp TCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTGGGTGTCGCAGCCTGCACTaGGCAGCACGTTTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: SSTGTVRKAGRWLRPGPGCRSLH*AARFGP
Trigger: CGGCCCGAAACGTGCTGCTCAGTGCAGGCTGCGACA...CCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp GGGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCCCGACGGGGGTCGATaGTGCGCACGCTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GMGHQDRPLQCGDMEALAPDGGR*CARSCP
Trigger: AGGACAAGAGCGTGCGCATCATCGACCCCCGTCGGG...GGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp TCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTGGGCCCGACGGGGGTCGATaGTGCGCACGCTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SSTGTVRKAGRWLRPGPGPDGGR*CARSCP
Trigger: AGGACAAGAGCGTGCGCATCATCGACCCCCGTCGGG...CCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp TCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTGGGCCTCCCGCAGTGAGATaGGGATCGGGTCGGCATCCC +
Preference number: 4 (lower is better)
Translates to: SSTGTVRKAGRWLRPGPGPPAVR*GSGRHP
Trigger: GGGATGCCGACCCGATCCTCATCTCACTGCGGGAGG...CCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGAGTAGGCCTCCCGCAGTaGGATGAGGATCGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRVGLPQ*DEDRVG
Trigger: GCCGACCCGATCCTCATCTCACTGCGGGAGGCCTAC...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGGTCGCCCTGCTCCTTaGCCAGCGCCCTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RGARLGVDILHRNSEESWGRPAP*PAPSGP
Trigger: GGGCCCTGAGGGCGCTGGTCAAGGAGCAGGGCGACC...CCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CCCAGCGGCAGGGTTTCCGTTCCACTCCCAGTCCCTGAGGGCCACAGGCGTGCACCTCCACAGGAACAGTaGGGAAAGCTGGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PSGRVSVPLPVPEGHRRAPPQEQ*GKLGAG
Trigger: GCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGG...TGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGAACGGAAACCCTGCCGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTTCTGCCGGACCACTTTaGGGAAGGACATGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: ASEALGSQLARCDPLAEASAGPL*GRTCRG
Trigger: CCCCCGACATGTCCTTCCGCAAAGTGGTCCGGCAGA...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GGCGTGTGGCTGTGGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCTGCTCCGGCTGCCCGAACACATaGCGGAATTTGCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GVWLWPYASPFSMRPSCSGCPNT*RNLLCR
Trigger: CCGGCAGAGCAAATTCCGGCATGTGTTCGGGCAGCC...GGAGCAGCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATAGCCTTCTCCCGCTCTaGCACCAGGGTGCCCCGACG +
Preference number: 4 (lower is better)
Translates to: VVGEMVPQRSRSSPGRRHSLLPL*HQGAPT
Trigger: CGTCGGGGCACCCTGGTGGCAGAGCGGGAGAAGGCT...ATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTCTCGAGTCCAGTTCCTaGAGGGCCATGGGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: ASEALGSQLARCDPLAEALESSS*RAMGSS
Trigger: CGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAG...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCCAGATGCGGTCGCCCTaGTCCTTGACCAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPQMRSP*SLTSAL
Trigger: GAGGGCGCTGGTCAAGGAGCAGGGCGACCGCATCTG...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TCCGTGTCACTGTCTCTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGCAGATGCGGTCGCCCTaGTCCTTGACCAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: SVSLSLASSARTGTCSGLQMRSP*SLTSAL
Trigger: GAGGGCGCTGGTCAAGGAGCAGGGCGACCGCATCTG...CAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CGTGTCACTGTCTCTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGATCCATGCGGCCCAGCTaGTCCTCCAGGCGGCAGATG +
Preference number: 4 (lower is better)
Translates to: RVTVSGFLSPHGDLLWAGSMRPS*SSRRQM
Trigger: CATCTGCCGCCTGGAGGAGCAGCTGGGCCGCATGGA...TCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACTCCATGCGGCCCAGCTaGTCCTCCAGGCGGCAGATG +
Preference number: 4 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDSMRPS*SSRRQM
Trigger: CATCTGCCGCCTGGAGGAGCAGCTGGGCCGCATGGA...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CGTGTCACTGTCTCTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGAAGCCAGCTAGCCCGGTaGGACCCGCTGGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RVTVSGFLSPHGDLLWAGSQLAR*DPLAEA
Trigger: AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCT...TCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GCGGCAGGGTTTCCGTTCCACTCCCAGTCCCTGAGGGCCACAGGCGTGCAGGGCTGTGGGGCTGCTCACTaGCCCCAGACCTTCTGCACA +
Preference number: 4 (lower is better)
Translates to: AAGFPFHSQSLRATGVQGCGAAH*PQTFCT
Trigger: TGTGCAGAAGGTCTGGGGGCAGTGAGCAGCCCCACA...GCCCTGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGAACGGAAACCCTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CCCCCTGAGTCACGGCTGAGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCAGCGCACCCAGAGGCAACTaGTCATCTTCTGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PPESRLRRRQASARPVASAPRGN*SSSAWP
Trigger: TGGCCAAGCAGAAGATGAGCAGTTGCCTCTGGGTGC...GCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGACTCAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp AGATGGGAGGGAGGGAAGGAGGTTGCTAGCTGGTGTCAGGGCTGGCTCTCCCTGGCAGGGCCTCAGCACTaGCCCCTGCGCTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: RWEGGKEVASWCQGWLSLAGPQH*PLRSLV
Trigger: GACCAGCGAGCGCAGGGGGCAGTGCTGAGGCCCTGC...CAGGGAGAGCCAGCCCTGACACCAGCTAGCAACCTCCTTCCCTCCCTCCCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CCCAGCGGCAGGGTTTCCGTTCCACTCCCAGTCCCTGAGGGCCACAGGCGTGCACATCCCAGGCTGCGCTaGCAGCAAAGGCGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSGRVSVPLPVPEGHRRAHPRLR*QQRRAG
Trigger: ACCTGCACGCCTTTGCTGGCAGCGCAGCCTGGGATG...TGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGAACGGAAACCCTGCCGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp TGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCATCTGCCAGGAAGATaGCCCGCATGGGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: WSGRWSLRGRGARLGVDIHLPGR*PAWAGP
Trigger: GGGCCCGGCCCATGCGGGCCATCTTCCTGGCAGATG...GATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp TCCGTGTCACTGTCTCTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGCATCAGCAGCAGTGGTaGTGGAGGCGGGGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: SVSLSLASSARTGTCSGLHQQQW*WRRGPL
Trigger: TAGGGGCCCCCGCCTCCACCACCACTGCTGCTGATG...CAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGAGGTGGCGTGTGGCTGTaGCCCTACGCATCCCCGTTC +
Preference number: 4 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRGGVWL*PYASPF
Trigger: GAACGGGGATGCGTAGGGCCACAGCCACACGCCACC...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACGGTGGCGTGTGGCTGTaGCCCTACGCATCCCCGTTC +
Preference number: 4 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDGGVWL*PYASPF
Trigger: GAACGGGGATGCGTAGGGCCACAGCCACACGCCACC...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp TCACGGCTGAGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCAGCAGTAGGAGCGATGAAGGTGGCGTGTaGCTGTGGCCCTACGCATCC +
Preference number: 4 (lower is better)
Translates to: SRLRRRQASARPVASSRSDEGGV*LWPYAS
Trigger: GGATGCGTAGGGCCACAGCCACACGCCACCTTCATC...GCTCCTACTGCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACCCGGTGCGACCCGCTaGCAGAAGCTGAGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRPGATR*QKLSGK
Trigger: CTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGG...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACCCCGGTGCGACCCGCTaGCAGAAGCTGAGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDPGATR*QKLSGK
Trigger: CTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGG...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp GTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATTGGGACGGGTGGGGGTaGGAACTGACCCCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: VVGEMVPQRSRSSPGRRHWDGWG*ELTPAL
Trigger: CAGCGCAGGGGTCAGTTCCCACCCCCACCCGTCCCA...ATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CAGGGCCCCGTTGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTAGGAAAGCTGGGCGCTaGCTTCGGCCTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QGPVARVQFLQGHGFLEVRKAGR*LRPGPG
Trigger: CCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCT...AACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp GTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATTCGGAACAGGCTAGGTaGGGGGTGTCGGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VVGEMVPQRSRSSPGRRHSEQAR*GVSGEG
Trigger: CCCCTCCCCCGACACCCCCCACCTAGCCTGTTCCGA...ATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp TGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCGCCTGGGATGGGGGATaGAGGGGCCTGGATGCACCC +
Preference number: 4 (lower is better)
Translates to: WSGRWSLRGRGARLGVDIAWDGG*RGLDAP
Trigger: GGGTGCATCCAGGCCCCTCCATCCCCCATCCCAGGC...GATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTAGGTTTTCCTCACTGTaGGGAGCTGGGGTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: ASEALGSQLARCDPLAEARFSSL*GAGVPA
Trigger: CGCTGGCACCCCAGCTCCCCACAGTGAGGAAAACCT...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537042.5
CDS-3UTR TCA 90 bp CCAGGTAAGGGCCTTCCCAGGGCTCCTGACAGGGGCCTGGTCCGGTATGGGGTGCCGAGCCGCTGGCTATaGCTTCGTCGTTGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: PGKGLPRAPDRGLVRYGVPSRWL*LRRCED
Trigger: GTCCTCACAACGACGAAGTCATAGCCAGCGGCTCGG...CACCCCATACCGGACCAGGCCCCTGTCAGGAGCCCTGGGAAGGCCCTTACCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACGGATCTGCCACACCATaGCCGTGCAGTCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDGSATP*PCSPPS
Trigger: GCTCGGAGGACTGCACGGTCATGGTGTGGCAGATCC...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp GGGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCACACGTTGCGCCGGCTaGTCTTCAGGTCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GMGHQDRPLQCGDMEALATRCAG*SSGPAA
Trigger: AGCAGCGGGACCTGAAGATCAGCCGGCGCAACGTGT...GGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp CTGCATGGCCTGCTCACCGTGCTCAAACTTCACCCCAGTGAGGCTGAACCTGACGGTCGCCCTGCTCCTTaGCCAGCGCCCTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LHGLLTVLKLHPSEAEPDGRPAP*PAPSGP
Trigger: GGGCCCTGAGGGCGCTGGTCAAGGAGCAGGGCGACC...GTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAGCACGGTGAGCAGGCCATGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGGGGCGGCGGAGGAGATaGAGGTGGCGTGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQGRRRR*RWRVAV
Trigger: CACAGCCACACGCCACCTTCATCTCCTCCGCCGCCC...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACCTCCACAGGAACAGTaGGGAAAGCTGGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRPPQEQ*GKLGAG
Trigger: GCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGG...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp TCCGTGTCACTGTCTCTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGTTTCGGGCCGTGGGGTaGCAGGCGATGATGCCCACT +
Preference number: 4 (lower is better)
Translates to: SVSLSLASSARTGTCSGLFRAVG*QAMMPT
Trigger: AGTGGGCATCATCGCCTGGCACCCCACGGCCCGAAA...CAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp ACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTAGCCTTCTCCCGCTCTaGCACCAGGGTGCCCCGACG +
Preference number: 4 (lower is better)
Translates to: TSSTGTVRKAGRWLRPGPSLLPL*HQGAPT
Trigger: CGTCGGGGCACCCTGGTGGCAGAGCGGGAGAAGGCT...AGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp TCGCTGGTCCTGGGGAGCCGAGGACCAGGTCGCCCTCCGTGTCACTGTCTCTGGCTCGAGTCCAGTTCCTaGAGGGCCATGGGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: SLVLGSRGPGRPPCHCLWLESSS*RAMGSS
Trigger: CGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAG...CCAGAGACAGTGACACGGAGGGCGACCTGGTCCTCGGCTCCCCAGGACCAGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACTGCCCATACCCCGCTaGGGCTCCTTGCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRLPIPR*GSLLVN
Trigger: GTTCACCAGCAAGGAGCCGCAGCGGGGTATGGGCAG...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GATGGAGGGGCCTGGATGCACCCAGAGGCAACTGCTCATCTTCTGCTTGGCCAGGGCCCCGCTTGGGCATaGTGCCCATACCCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: DGGAWMHPEATAHLLLGQGPAWA*CPYPAA
Trigger: CGCAGCGGGGTATGGGCAGCATGCCCAAGCGGGGCC...CTGGCCAAGCAGAAGATGAGCAGTTGCCTCTGGGTGCATCCAGGCCCCTCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGGCCCCGCTTGGGCATaGTGCCCATACCCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: RGARLGVDILHRNSEESWGPAWA*CPYPAA
Trigger: CGCAGCGGGGTATGGGCAGCATGCCCAAGCGGGGCC...CCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp TCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTGGGGTGGGAACTGACCCCTaGGCTGCCTCAGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SSTGTVRKAGRWLRPGPGVGTDP*AASEAL
Trigger: CAGAGCCTCTGAGGCAGCGCAGGGGTCAGTTCCCAC...CCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTAATCCAGGGGAGCAATaGCTGTGGGGCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ARGHGGPAVRQHVAPADLNPGEQ*LWGCSL
Trigger: CAGTGAGCAGCCCCACAGGCATTGCTCCCCTGGATT...AAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR GCA 90 bp CGTGTCACTGTCTCTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGACAGGCTTCCGCTTCCTaGCCACATACCCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: RVTVSGFLSPHGDLLWAGQASAS*PHTPPA
Trigger: GGCAGGTGGGGTATGTGGGCAGGAAGCGGAAGCCTG...TCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp AGGCCCAGACATTCTAGCCCCGACCGCCTGTGGCCCCCATCCCAAGAACCCGGGAGCTCAGTGCTCGTCTaGAGTGAAGGGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RPRHSSPDRLWPPSQEPGSSVLV*SEGWPR
Trigger: CCTGGGCCACCCTTCACTGCAGACGAGCACTGAGCT...CCCGGGTTCTTGGGATGGGGGCCACAGGCGGTCGGGGCTAGAATGTCTGGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCCCAGGCTCCAGGAATaGAAGTTCCCGCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: ARGHGGPAVRQHVAPADLPRLQE*KFPLTG
Trigger: TCCTGTGAGCGGGAACTTGCATTCCTGGAGCCTGGG...AAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR GCA 90 bp ACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTGGAGGCGGGCGCAGCTaGCAGAGGAAGTCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: TSSTGTVRKAGRWLRPGPGGGRS*QRKSAV
Trigger: GACCGCAGACTTCCTCTGGCAGCTGCGCCCGCCTCC...AGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp AGCCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCGCAGGGCCTCAGCACTaGCCCCTGCGCTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SLQATIRDVVIVCVLLILAGPQH*PLRSLV
Trigger: GACCAGCGAGCGCAGGGGGCAGTGCTGAGGCCCTGC...GAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GGGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCTGCCAGCAAAGGCGTaGAGGTCACTCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GMGHQDRPLQCGDMEALALPAKA*RSLSRA
Trigger: GGCCCTGCTGAGTGACCTGCACGCCTTTGCTGGCAG...GGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTGGGCTGCCAGCAAAGGCGTaGAGGTCACTCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSTGTVRKAGRWLRPGPGLPAKA*RSLSRA
Trigger: GGCCCTGCTGAGTGACCTGCACGCCTTTGCTGGCAG...CCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TCCGTGTCACTGTCTCTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGACCGGCCTCTACAGTaGGGTGACATGGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SVSLSLASSARTGTCSGLDRPLQ*GDMEAL
Trigger: CAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTC...CAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp ACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTCCTCCAGGCCCCGCTTaGGCATGCTGCCCATACCCC +
Preference number: 4 (lower is better)
Translates to: TSSTGTVRKAGRWLRPGPPPGPA*ACCPYP
Trigger: GGGGTATGGGCAGCATGCCCAAGCGGGGCCTGGAGG...AGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CAGAGCTGGAGCCCACGCTGTCCTCCGCGCTGCCACCCGAGCCCAAGGCCCCTGGAGGTCCGACTTTCTTaGCACAGTCATGACGATGGG +
Preference number: 4 (lower is better)
Translates to: QSWSPRCPPRCHPSPRPLEVRLS*HSHDDG
Trigger: CCCATCGTCATGACTGTGCCAAGAAAGTCGGACCTC...CAGGGGCCTTGGGCTCGGGTGGCAGCGCGGAGGACAGCGTGGGCTCCAGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCAGGTCCCGCTGCTTCATCAGCAGCAGTGGTaGTGGAGGCGGGGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: GPAVRQHVAPADLQVPLLHQQQW*WRRGPL
Trigger: TAGGGGCCCCCGCCTCCACCACCACTGCTGCTGATG...AAGCAGCGGGACCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CCCAGCGGCAGGGTTTCCGTTCCACTCCCAGTCCCTGAGGGCCACAGGCGTGCAGATGAAGGTGGCGTGTaGCTGTGGCCCTACGCATCC +
Preference number: 4 (lower is better)
Translates to: PSGRVSVPLPVPEGHRRADEGGV*LWPYAS
Trigger: GGATGCGTAGGGCCACAGCCACACGCCACCTTCATC...TGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGAACGGAAACCCTGCCGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CCGCCCAGGCTCCAGGAATGCAAGTTCCCGCTCACAGGAAGACCAGGTAAGGGCTGGGACGGGTGGGGGTaGGAACTGACCCCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: PPRLQECKFPLTGRPGKGWDGWG*ELTPAL
Trigger: CAGCGCAGGGGTCAGTTCCCACCCCCACCCGTCCCA...GCCCTTACCTGGTCTTCCTGTGAGCGGGAACTTGCATTCCTGGAGCCTGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CCGCCCAGGCTCCAGGAATGCAAGTTCCCGCTCACAGGAAGACCAGGTAAGGGCTGGGCCTGGGACGGGTaGGGGTGGGAACTGACCCCT +
Preference number: 4 (lower is better)
Translates to: PPRLQECKFPLTGRPGKGWAWDG*GWELTP
Trigger: AGGGGTCAGTTCCCACCCCCACCCGTCCCAGGCCCA...GCCCTTACCTGGTCTTCCTGTGAGCGGGAACTTGCATTCCTGGAGCCTGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGGGCCTGGGACGGGTaGGGGTGGGAACTGACCCCT +
Preference number: 4 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQWAWDG*GWELTP
Trigger: AGGGGTCAGTTCCCACCCCCACCCGTCCCAGGCCCA...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCCTGCTTCGGCCTGGGCCTaGGACGGGTGGGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PAGHHPRRGHSLCPAHPPASAWA*DGWGWE
Trigger: TTCCCACCCCCACCCGTCCCAGGCCCAGGCCGAAGC...AGGAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GAGCAATGCCTGTGGGGCTGCTCACTGCCCCCAGACCTTCTGCACATGTGTGACGCTTCGGCCTGGGCCTaGGACGGGTGGGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: EQCLWGCSLPPDLLHMCDASAWA*DGWGWE
Trigger: TTCCCACCCCCACCCGTCCCAGGCCCAGGCCGAAGC...GTCACACATGTGCAGAAGGTCTGGGGGCAGTGAGCAGCCCCACAGGCATTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GAAGGTGGCGTGTGGCTGTGGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCAACAGTGAGGAAAGCTaGGCGCTGGCTTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EGGVWLWPYASPFSMRPSNSEES*ALASAW
Trigger: CCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTT...GCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCCACCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp GTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATGAGGGAGCAGAGGGCTaGGCAGTGGTCGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: VVGEMVPQRSRSSPGRRHEGAEG*AVVGEM
Trigger: CATCTCCCCGACCACTGCCCAGCCCTCTGCTCCCTC...ATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCCGGTATGGGGTGCTaGGGGCCAGGCCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RLGVDILHRNSEESWALASGMGC*GPGLES
Trigger: GGACTCCAGGCCTGGCCCCCAGCACCCCATACCGGA...AGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp TCGCTGGTCCTGGGGAGCCGAGGACCAGGTCGCCCTCCGTGTCACTGTCTCTGGTGGTCAACCAGGCTCTaGCCCTGTGAGATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SLVLGSRGPGRPPCHCLWWSTRL*PCEISP
Trigger: GGGGCTGATCTCACAGGGCCAGAGCCTGGTTGACCA...CCAGAGACAGTGACACGGAGGGCGACCTGGTCCTCGGCTCCCCAGGACCAGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CCCAAGGCCCCTGGCAGGGCCAGCAGCATCCCGAGCCCTAAGGTGCAGGGCAGATGGTGTGGGGCAGGCTaGGTGACCAAGACCACTTTC +
Preference number: 4 (lower is better)
Translates to: PKAPGRASSIPSPKVQGRWCGAG*VTKTTF
Trigger: GAAAGTGGTCTTGGTCACCCAGCCTGCCCCACACCA...TCTGCCCTGCACCTTAGGGCTCGGGATGCTGCTGGCCCTGCCAGGGGCCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CAGGGCCCCGTTGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTGAACCTCCTCACCCCTaGGTCCCAGAGCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QGPVARVQFLQGHGFLEVEPPHP*VPERQL
Trigger: CAGCTGGCGCTCTGGGACCCAGGGGTGAGGAGGTTC...AACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR TCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACCCGAGCCGCTGGCTATaGCTTCGTCGTTGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDPSRWL*LRRCED
Trigger: GTCCTCACAACGACGAAGTCATAGCCAGCGGCTCGG...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp GTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATGGATCTGCCACACCATaGCCGTGCAGTCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: VVGEMVPQRSRSSPGRRHGSATP*PCSPPS
Trigger: GCTCGGAGGACTGCACGGTCATGGTGTGGCAGATCC...ATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CAGAGCTGGAGCCCACGCTGTCCTCCGCGCTGCCACCCGAGCCCAAGGCCCCTGCTTGTCCTTGCATGCTaGGCAAAACAGGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: QSWSPRCPPRCHPSPRPLLVLAC*AKQAAI
Trigger: AATGGCAGCCTGTTTTGCTCAGCATGCAAGGACAAG...CAGGGGCCTTGGGCTCGGGTGGCAGCGCGGAGGACAGCGTGGGCTCCAGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp CGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTCCCGACGGGGGTCGATaGTGCGCACGCTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLGVDILHRNSEESWALAPDGGR*CARSCP
Trigger: AGGACAAGAGCGTGCGCATCATCGACCCCCGTCGGG...AGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGCGATCTCGCACTTGCTaGCCTCCAGGCCCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQRSRTC*PPGPAW
Trigger: CCAAGCGGGGCCTGGAGGTCAGCAAGTGCGAGATCG...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTCCTCCCGCAGTGAGATaGGGATCGGGTCGGCATCCC +
Preference number: 4 (lower is better)
Translates to: RLGVDILHRNSEESWALAPPAVR*GSGRHP
Trigger: GGGATGCCGACCCGATCCTCATCTCACTGCGGGAGG...AGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp ACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTGTAGGCCTCCCGCAGTaGGATGAGGATCGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: TSSTGTVRKAGRWLRPGPVGLPQ*DEDRVG
Trigger: GCCGACCCGATCCTCATCTCACTGCGGGAGGCCTAC...AGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp AGATGGGAGGGAGGGAAGGAGGTTGCTAGCTGGTGTCAGGGCTGGCTCTCCCTGGTAGGCCTCCCGCAGTaGGATGAGGATCGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: RWEGGKEVASWCQGWLSLVGLPQ*DEDRVG
Trigger: GCCGACCCGATCCTCATCTCACTGCGGGAGGCCTAC...CAGGGAGAGCCAGCCCTGACACCAGCTAGCAACCTCCTTCCCTCCCTCCCATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp TGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCACACGTTGCGCCGGCTaGTCTTCAGGTCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: WSGRWSLRGRGARLGVDITRCAG*SSGPAA
Trigger: AGCAGCGGGACCTGAAGATCAGCCGGCGCAACGTGT...GATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp GGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCAGGTCCCGCTGCTTACACGTTGCGCCGGCTaGTCTTCAGGTCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPAVRQHVAPADLQVPLLTRCAG*SSGPAA
Trigger: AGCAGCGGGACCTGAAGATCAGCCGGCGCAACGTGT...AAGCAGCGGGACCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp TCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCAATGTGGGGTCGCCCTGCTCCTTaGCCAGCGCCCTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SASAILLLGLTSSLGPMWGRPAP*PAPSGP
Trigger: GGGCCCTGAGGGCGCTGGTCAAGGAGCAGGGCGACC...CCACATTGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp CTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGGTGGGGGTGGGAACTaGCCCCTGCGCTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LRGRGARLGVDILHRNSEGGGGN*PLRCLR
Trigger: TCTGAGGCAGCGCAGGGGTCAGTTCCCACCCCCACC...CTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCCTTCCACTCCCAGTCCCTaGGGGCCACAGGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PAGHHPRRGHSLCPAHPPSTPSP*GPQACR
Trigger: CCTGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGA...AGGAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGATCTGCCGGACCACTTTaGGGAAGGACATGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRSAGPL*GRTCRG
Trigger: CCCCCGACATGTCCTTCCGCAAAGTGGTCCGGCAGA...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp AGCTCCACAGGCCCAGACATTCTAGCCCCGACCGCCTGTGGCCCCCATCCCAAGGGCTGCCCGAACACATaGCGGAATTTGCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: SSTGPDILAPTACGPHPKGCPNT*RNLLCR
Trigger: CCGGCAGAGCAAATTCCGGCATGTGTTCGGGCAGCC...CTTGGGATGGGGGCCACAGGCGGTCGGGGCTAGAATGTCTGGGCCTGTGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATTTTCGGGCCGTGGGGTaGCAGGCGATGATGCCCACT +
Preference number: 4 (lower is better)
Translates to: VVGEMVPQRSRSSPGRRHFRAVG*QAMMPT
Trigger: AGTGGGCATCATCGCCTGGCACCCCACGGCCCGAAA...ATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp ACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTTCAGGTCCCGCTGCTTaGTGGGCACGTAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TSSTGTVRKAGRWLRPGPSGPAA*WARRPP
Trigger: GGGAGGCCTACGTGCCCAGCAAGCAGCGGGACCTGA...AGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGCAGATGCGGTCGCCCTaGTCCTTGACCAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQQMRSP*SLTSAL
Trigger: GAGGGCGCTGGTCAAGGAGCAGGGCGACCGCATCTG...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTAGCCAGCTAGCCCGGTaGGACCCGCTGGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RLGVDILHRNSEESWALASQLAR*DPLAEA
Trigger: AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCT...AGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CCCAAGGCCCCTGGCAGGGCCAGCAGCATCCCGAGCCCTAAGGTGCAGGGCAGATGCCCCCAGACCTTCTaGACATGTGTGACTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PKAPGRASSIPSPKVQGRCPQTF*TCVTPV
Trigger: CACAGGAGTCACACATGTGCAGAAGGTCTGGGGGCA...TCTGCCCTGCACCTTAGGGCTCGGGATGCTGCTGGCCCTGCCAGGGGCCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCCAATGCCTGTGGGGCTaGTCACTGCCCCCAGACCTT +
Preference number: 4 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPQCLWG*SLPPDL
Trigger: AAGGTCTGGGGGCAGTGAGCAGCCCCACAGGCATTG...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GGGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCAATGCCTGTGGGGCTaGTCACTGCCCCCAGACCTT +
Preference number: 4 (lower is better)
Translates to: GMGHQDRPLQCGDMEALAQCLWG*SLPPDL
Trigger: AAGGTCTGGGGGCAGTGAGCAGCCCCACAGGCATTG...GGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GACCAGGTAAGGGCCTTCCCAGGGCTCCTGACAGGGGCCTGGTCCGGTATGGGGAATCCAGGGGAGCAATaGCTGTGGGGCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: DQVRAFPGLLTGAWSGMGNPGEQ*LWGCSL
Trigger: CAGTGAGCAGCCCCACAGGCATTGCTCCCCTGGATT...CCCCATACCGGACCAGGCCCCTGTCAGGAGCCCTGGGAAGGCCCTTACCTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CGTGTCACTGTCTCTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGAAGCTCAGTGCTCGTCTaGAGTGAAGGGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RVTVSGFLSPHGDLLWAGSSVLV*SEGWPR
Trigger: CCTGGGCCACCCTTCACTGCAGACGAGCACTGAGCT...TCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCGACGCCTCTCCACATTaGTGCTCGCCTTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: WSGRWSLRGRGARLGVDIDASPH*CSPSPG
Trigger: CCCTGGGGAAGGCGAGCAGCAATGTGGAGAGGCGTC...GATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATGCTGTCATCCCAGGCTaGGCTGCCAGCAAAGGCGTG +
Preference number: 4 (lower is better)
Translates to: VVGEMVPQRSRSSPGRRHAVIPG*AASKGV
Trigger: CACGCCTTTGCTGGCAGCGCAGCCTGGGATGACAGC...ATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GAGCAATGCCTGTGGGGCTGCTCACTGCCCCCAGACCTTCTGCACATGTGTGACGGAAGATGGCCCGCATaGGCCGGGCCCCCTCATGAG +
Preference number: 4 (lower is better)
Translates to: EQCLWGCSLPPDLLHMCDGRWPA*AGPPHE
Trigger: CTCATGAGGGGGCCCGGCCCATGCGGGCCATCTTCC...GTCACACATGTGCAGAAGGTCTGGGGGCAGTGAGCAGCCCCACAGGCATTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp AGGCCCAGACATTCTAGCCCCGACCGCCTGTGGCCCCCATCCCAAGAACCCGGGTTCCTCGAGGTTTTCTaGGTCCCAGAGCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RPRHSSPDRLWPPSQEPGFLEVF*VPERQL
Trigger: CAGCTGGCGCTCTGGGACCCAGAAAACCTCGAGGAA...CCCGGGTTCTTGGGATGGGGGCCACAGGCGGTCGGGGCTAGAATGTCTGGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341356.10
CDS-3UTR CCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTCAAAGTACCGGATGCTaGAGTCACCCTTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: ASEALGSQLARCDPLAEAQSTGC*SHPCRR
Trigger: TCTGCGGCAAGGGTGACTCCAGCATCCGGTACTTTG...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CCCCGTTGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTCCTCCAGGCCCCGCTTaGGCATGCTGCCCATACCCC +
Preference number: 4 (lower is better)
Translates to: PRCSSPVPAGPWVPRGFPPPGPA*ACCPYP
Trigger: GGGGTATGGGCAGCATGCCCAAGCGGGGCCTGGAGG...AGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGCAGCAGCAGTGGTGGTaGAGGCGGGGGCCCCTAGGT +
Preference number: 4 (lower is better)
Translates to: RGARLGVDILHRNSEESWQQQWW*RRGPLG
Trigger: ACCTAGGGGCCCCCGCCTCCACCACCACTGCTGCTG...CCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGGGTGGCGTGTGGCTGTaGCCCTACGCATCCCCGTTC +
Preference number: 4 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQGGVWL*PYASPF
Trigger: GAACGGGGATGCGTAGGGCCACAGCCACACGCCACC...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp AAGCTGAGTGGGAAGGGGGCGGCGGAGGAGATGAAGGTGGCGTGTGGCTGTGGCGATGAAGGTGGCGTGTaGCTGTGGCCCTACGCATCC +
Preference number: 4 (lower is better)
Translates to: KLSGKGAAEEMKVACGCGDEGGV*LWPYAS
Trigger: GGATGCGTAGGGCCACAGCCACACGCCACCTTCATC...GCCACAGCCACACGCCACCTTCATCTCCTCCGCCGCCCCCTTCCCACTCAGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp TCCGTGTCACTGTCTCTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGAACAGTGAGGAAAGCTaGGCGCTGGCTTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SVSLSLASSARTGTCSGLNSEES*ALASAW
Trigger: CCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTT...CAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGCAGAGGGCTGGGCAGTaGTCGGGGAGATGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQQRAGQ*SGRWSL
Trigger: GAGGGACCATCTCCCCGACCACTGCCCAGCCCTCTG...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGAGCCCCGACCGCCTGTaGCCCCCATCCCAAGAACCC +
Preference number: 4 (lower is better)
Translates to: RGARLGVDILHRNSEESWSPDRL*PPSQEP
Trigger: GGGTTCTTGGGATGGGGGCCACAGGCGGTCGGGGCT...CCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GACCAGGTAAGGGCCTTCCCAGGGCTCCTGACAGGGGCCTGGTCCGGTATGGGGTGCTCATCTTCTGCTTaGCCAGGTCCCCAAACGGGG +
Preference number: 4 (lower is better)
Translates to: DQVRAFPGLLTGAWSGMGCSSSA*PGPQTG
Trigger: CCCCGTTTGGGGACCTGGCCAAGCAGAAGATGAGCA...CCCCATACCGGACCAGGCCCCTGTCAGGAGCCCTGGGAAGGCCCTTACCTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGCTCTCCCTGAGGCCTaGGATGGGGGATGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LRGRGARLGVDILHRNSEALPEA*DGGWRG
Trigger: GCCCCTCCATCCCCCATCCCAGGCCTCAGGGAGAGC...CTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCTGGTCAACCAGGCTCTaGCCCTGTGAGATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPWSTRL*PCEISP
Trigger: GGGGCTGATCTCACAGGGCCAGAGCCTGGTTGACCA...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp TCACGGCTGAGGCGGCGCCAGGCCAGTGCTAGGCCAGTGGCCAGCAGTAGGAGCGTTCCTGCAGGGCCATaGGTTCCTCGAGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SRLRRRQASARPVASSRSVPAGP*VPRGFP
Trigger: AGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAAC...GCTCCTACTGCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR TCA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGGGGTGCCAGGCGATaGTGCCCACTCGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQWGARR*CPLAWC
Trigger: ACACCAAGCGAGTGGGCATCATCGCCTGGCACCCCA...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGTGTCGCAGCCTGCACTaGGCAGCACGTTTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: RGARLGVDILHRNSEESWCRSLH*AARFGP
Trigger: CGGCCCGAAACGTGCTGCTCAGTGCAGGCTGCGACA...CCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCCTTGTCGCAGCCTGCACTaGGCAGCACGTTTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: PAGHHPRRGHSLCPAHPPCRSLH*AARFGP
Trigger: CGGCCCGAAACGTGCTGCTCAGTGCAGGCTGCGACA...AGGAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp CGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGCGATCTCGCACTTGCTaGCCTCCAGGCCCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: RGARLGVDILHRNSEESWRSRTC*PPGPAW
Trigger: CCAAGCGGGGCCTGGAGGTCAGCAAGTGCGAGATCG...CCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp AGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAGGGCGGCGGAGGAGATaGAGGTGGCGTGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RGRGARLGVDILHRNSEEGRRRR*RWRVAV
Trigger: CACAGCCACACGCCACCTTCATCTCCTCCGCCGCCC...TTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp AGATGGGAGGGAGGGAAGGAGGTTGCTAGCTGGTGTCAGGGCTGGCTCTCCCTGCCTCCACAGGAACAGTaGGGAAAGCTGGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: RWEGGKEVASWCQGWLSLPPQEQ*GKLGAG
Trigger: GCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGG...CAGGGAGAGCCAGCCCTGACACCAGCTAGCAACCTCCTTCCCTCCCTCCCATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGAGTGGGGCAGGCTGGGTaGCCAAGACCACTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRVGQAG*PRPLSF
Trigger: AAACGAAAGTGGTCTTGGTCACCCAGCCTGCCCCAC...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CCCAGCGGCAGGGTTTCCGTTCCACTCCCAGTCCCTGAGGGCCACAGGCGTGCATGCCGGAATTTGCTCTaGCGGACCACTTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: PSGRVSVPLPVPEGHRRACRNLL*RTTLRK
Trigger: CTTCCGCAAAGTGGTCCGGCAGAGCAAATTCCGGCA...TGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGAACGGAAACCCTGCCGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTACACATGCCGGAATTTaGTCTGCCGGACCACTTTGC +
Preference number: 4 (lower is better)
Translates to: ASEALGSQLARCDPLAEATHAGI*SAGPLC
Trigger: GCAAAGTGGTCCGGCAGAGCAAATTCCGGCATGTGT...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATGGCTGCCCGAACACATaGCGGAATTTGCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: VVGEMVPQRSRSSPGRRHGCPNT*RNLLCR
Trigger: CCGGCAGAGCAAATTCCGGCATGTGTTCGGGCAGCC...ATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACGGTAGGCCTTGTCAATaGGGCCCGTCTTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDGRPCQ*GPSCLG
Trigger: CCCTAAGCAAGACGGGCCGCATTGACAAGGCCTACC...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGAGGTAGGCCTTGTCAATaGGGCCCGTCTTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRGRPCQ*GPSCLG
Trigger: CCCTAAGCAAGACGGGCCGCATTGACAAGGCCTACC...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp TCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTGGGCCGTTCTCTGGGATCTaGCACACCATGACCGTGCAG +
Preference number: 4 (lower is better)
Translates to: SSTGTVRKAGRWLRPGPGPFSGI*HTMTVQ
Trigger: CTGCACGGTCATGGTGTGGCAGATCCCAGAGAACGG...CCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp AAGCTGAGTGGGAAGGGGGCGGCGGAGGAGATGAAGGTGGCGTGTGGCTGTGGCCCGTTCTCTGGGATCTaGCACACCATGACCGTGCAG +
Preference number: 4 (lower is better)
Translates to: KLSGKGAAEEMKVACGCGPFSGI*HTMTVQ
Trigger: CTGCACGGTCATGGTGTGGCAGATCCCAGAGAACGG...GCCACAGCCACACGCCACCTTCATCTCCTCCGCCGCCCCCTTCCCACTCAGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTCCCACTCGCTTGGTGTaGCCCTCCAGTACCACCACC +
Preference number: 4 (lower is better)
Translates to: RLGVDILHRNSEESWALAPTRLV*PSSTTT
Trigger: GGTGGTGGTACTGGAGGGGCACACCAAGCGAGTGGG...AGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTTTCGGGCCGTGGGGTaGCAGGCGATGATGCCCACT +
Preference number: 4 (lower is better)
Translates to: RLGVDILHRNSEESWALAFRAVG*QAMMPT
Trigger: AGTGGGCATCATCGCCTGGCACCCCACGGCCCGAAA...AGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CTGCATGGCCTGCTCACCGTGCTCAAACTTCACCCCAGTGAGGCTGAACCTGACAGCCTTCTCCCGCTCTaGCACCAGGGTGCCCCGACG +
Preference number: 4 (lower is better)
Translates to: LHGLLTVLKLHPSEAEPDSLLPL*HQGAPT
Trigger: CGTCGGGGCACCCTGGTGGCAGAGCGGGAGAAGGCT...GTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAGCACGGTGAGCAGGCCATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CCAGGTAAGGGCCTTCCCAGGGCTCCTGACAGGGGCCTGGTCCGGTATGGGGTGGAACACCTTGCCATCTaGCAGGAAGATGGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: PGKGLPRAPDRGLVRYGVEHLAI*QEDGPH
Trigger: ATGCGGGCCATCTTCCTGGCAGATGGCAAGGTGTTC...CACCCCATACCGGACCAGGCCCCTGTCAGGAGCCCTGGGAAGGCCCTTACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTCACTGTGGCCCCGCTTGGGCATaGTGCCCATACCCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: CSSPVPAGPWVPRGFPHCGPAWA*CPYPAA
Trigger: CGCAGCGGGGTATGGGCAGCATGCCCAAGCGGGGCC...ACAGTGAGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537042.5
CDS-3UTR GCA 90 bp AGCCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCTCAGGTCCCGCTGCTTaGTGGGCACGTAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SLQATIRDVVIVCVLLILSGPAA*WARRPP
Trigger: GGGAGGCCTACGTGCCCAGCAAGCAGCGGGACCTGA...GAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGAGCCAGCTAGCCCGGTaGGACCCGCTGGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RGARLGVDILHRNSEESWSQLAR*DPLAEA
Trigger: AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCT...CCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTGTGGGAACTGACCCCTaGGCTGCCTCAGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RLGVDILHRNSEESWALAVGTDP*AASEAL
Trigger: CAGAGCCTCTGAGGCAGCGCAGGGGTCAGTTCCCAC...AGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp AGATGGGAGGGAGGGAAGGAGGTTGCTAGCTGGTGTCAGGGCTGGCTCTCCCTGCAGGCTTCCGCTTCCTaGCCACATACCCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: RWEGGKEVASWCQGWLSLQASAS*PHTPPA
Trigger: GGCAGGTGGGGTATGTGGGCAGGAAGCGGAAGCCTG...CAGGGAGAGCCAGCCCTGACACCAGCTAGCAACCTCCTTCCCTCCCTCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATGCCTCTCCACATTGCTaGTCGCCTTCCCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VVGEMVPQRSRSSPGRRHASPHC*SPSPGS
Trigger: TGACCCTGGGGAAGGCGAGCAGCAATGTGGAGAGGC...ATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGGCTGTCATCCCAGGCTaGGCTGCCAGCAAAGGCGTG +
Preference number: 4 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQAVIPG*AASKGV
Trigger: CACGCCTTTGCTGGCAGCGCAGCCTGGGATGACAGC...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACGGTCAGCCCGTTCTCTaGGATCTGCCACACCATGAC +
Preference number: 4 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDGQPVL*DLPHHD
Trigger: GTCATGGTGTGGCAGATCCCAGAGAACGGGCTGACC...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCCTGGTGGCGTGTGGCTGTaGCCCTACGCATCCCCGTTC +
Preference number: 4 (lower is better)
Translates to: PAGHHPRRGHSLCPAHPPGGVWL*PYASPF
Trigger: GAACGGGGATGCGTAGGGCCACAGCCACACGCCACC...AGGAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp TGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCAACAGTGAGGAAAGCTaGGCGCTGGCTTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WSGRWSLRGRGARLGVDINSEES*ALASAW
Trigger: CCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTT...GATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp GTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCAGTGGTCGGGGAGATaGTCCCTCAGAGGTCGAGGA +
Preference number: 4 (lower is better)
Translates to: VVGEMVPQRSRSSPGRRHQWSGR*SLRGRG
Trigger: TCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG...ATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CAGGGCCCCGTTGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTCAGTGGTCGGGGAGATaGTCCCTCAGAGGTCGAGGA +
Preference number: 4 (lower is better)
Translates to: QGPVARVQFLQGHGFLEVQWSGR*SLRGRG
Trigger: TCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG...AACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp TGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCAGTGGTCGGGGAGATaGTCCCTCAGAGGTCGAGGA +
Preference number: 4 (lower is better)
Translates to: WSGRWSLRGRGARLGVDIQWSGR*SLRGRG
Trigger: TCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG...GATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp TGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCGTCTGCAGTGAAGGGTaGCCCAGGCTTCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: WSGRWSLRGRGARLGVDIVCSEG*PRLPLP
Trigger: AGGAAGCGGAAGCCTGGGCCACCCTTCACTGCAGAC...GATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GGGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCAAGGAGGTTGCTAGCTaGTGTCAGGGCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GMGHQDRPLQCGDMEALAKEVAS*CQGWLS
Trigger: GGAGAGCCAGCCCTGACACCAGCTAGCAACCTCCTT...GGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp CGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTCCGAGCCGCTGGCTATaGCTTCGTCGTTGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: RLGVDILHRNSEESWALAPSRWL*LRRCED
Trigger: GTCCTCACAACGACGAAGTCATAGCCAGCGGCTCGG...AGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGGATCTGCCACACCATaGCCGTGCAGTCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: LRGRGARLGVDILHRNSEGSATP*PCSPPS
Trigger: GCTCGGAGGACTGCACGGTCATGGTGTGGCAGATCC...CTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CCCCGTTGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTTGGGGTGCCAGGCGATaGTGCCCACTCGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PRCSSPVPAGPWVPRGFPWGARR*CPLAWC
Trigger: ACACCAAGCGAGTGGGCATCATCGCCTGGCACCCCA...AGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp GGCGTGTGGCTGTGGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCTGCTCCCTTGTCCTTGCATGCTaGGCAAAACAGGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: GVWLWPYASPFSMRPSCSLVLAC*AKQAAI
Trigger: AATGGCAGCCTGTTTTGCTCAGCATGCAAGGACAAG...GGAGCAGCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGAGAAGCAGCACCAACTTaGAGCTGGATGCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRREAAPT*SWMQPC
Trigger: GCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTC...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp TGCTCATCCTCCTGTCGCTCAAGGTCATTGTCTGTGGACCCCAGCTCAGCTCGGCAGGCTCTGGCCCTGTaGGATCAGCCCCCATCCCTC +
Preference number: 4 (lower is better)
Translates to: CSSSCRSRSLSVDPSSARQALAL*DQPPSL
Trigger: GAGGGATGGGGGCTGATCTCACAGGGCCAGAGCCTG...CCGAGCTGAGCTGGGGTCCACAGACAATGACCTTGAGCGACAGGAGGATGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp TGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCGTGGGGCAGGCTGGGTaGCCAAGACCACTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: WSGRWSLRGRGARLGVDIVGQAG*PRPLSF
Trigger: AAACGAAAGTGGTCTTGGTCACCCAGCCTGCCCCAC...GATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp AGGCCCAGACATTCTAGCCCCGACCGCCTGTGGCCCCCATCCCAAGAACCCGGGACACATGCCGGAATTTaGTCTGCCGGACCACTTTGC +
Preference number: 4 (lower is better)
Translates to: RPRHSSPDRLWPPSQEPGTHAGI*SAGPLC
Trigger: GCAAAGTGGTCCGGCAGAGCAAATTCCGGCATGTGT...CCCGGGTTCTTGGGATGGGGGCCACAGGCGGTCGGGGCTAGAATGTCTGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp ACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTGGCTGCCCGAACACATaGCGGAATTTGCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: TSSTGTVRKAGRWLRPGPGCPNT*RNLLCR
Trigger: CCGGCAGAGCAAATTCCGGCATGTGTTCGGGCAGCC...AGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACTCGTTCTTGACCGGCTaGCCGAACACATGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDSFLTG*PNTCRN
Trigger: ATTCCGGCATGTGTTCGGGCAGCCGGTCAAGAACGA...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCAGGTCCCGCTGCTTCCGTTCTCTGGGATCTaGCACACCATGACCGTGCAG +
Preference number: 4 (lower is better)
Translates to: GPAVRQHVAPADLQVPLLPFSGI*HTMTVQ
Trigger: CTGCACGGTCATGGTGTGGCAGATCCCAGAGAACGG...AAGCAGCGGGACCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCCTCCCACTCGCTTGGTGTaGCCCTCCAGTACCACCACC +
Preference number: 4 (lower is better)
Translates to: PAGHHPRRGHSLCPAHPPPTRLV*PSSTTT
Trigger: GGTGGTGGTACTGGAGGGGCACACCAAGCGAGTGGG...AGGAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CCCCGTTGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTCCCACTCGCTTGGTGTaGCCCTCCAGTACCACCACC +
Preference number: 4 (lower is better)
Translates to: PRCSSPVPAGPWVPRGFPPTRLV*PSSTTT
Trigger: GGTGGTGGTACTGGAGGGGCACACCAAGCGAGTGGG...AGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CCCCGTTGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTTTTCGGGCCGTGGGGTaGCAGGCGATGATGCCCACT +
Preference number: 4 (lower is better)
Translates to: PRCSSPVPAGPWVPRGFPFRAVG*QAMMPT
Trigger: AGTGGGCATCATCGCCTGGCACCCCACGGCCCGAAA...AGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACGAACACCTTGCCATCTaGCAGGAAGATGGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDEHLAI*QEDGPH
Trigger: ATGCGGGCCATCTTCCTGGCAGATGGCAAGGTGTTC...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp AAGCTGAGTGGGAAGGGGGCGGCGGAGGAGATGAAGGTGGCGTGTGGCTGTGGCGAACACCTTGCCATCTaGCAGGAAGATGGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: KLSGKGAAEEMKVACGCGEHLAI*QEDGPH
Trigger: ATGCGGGCCATCTTCCTGGCAGATGGCAAGGTGTTC...GCCACAGCCACACGCCACCTTCATCTCCTCCGCCGCCCCCTTCCCACTCAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGCAGCAGGGCCCCGTTaGTCGAGTCCAGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LRGRGARLGVDILHRNSEAAGPR*SSPVPA
Trigger: TGCAGGAACTGGACTCGAGCAACGGGGCCCTGCTGC...CTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CCCCGTTGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTGTGGGAACTGACCCCTaGGCTGCCTCAGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PRCSSPVPAGPWVPRGFPVGTDP*AASEAL
Trigger: CAGAGCCTCTGAGGCAGCGCAGGGGTCAGTTCCCAC...AGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCTGCCCCCAGACCTTCTaGACATGTGTGACTCCTGTG +
Preference number: 4 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPCPQTF*TCVTPV
Trigger: CACAGGAGTCACACATGTGCAGAAGGTCTGGGGGCA...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GATGGAGGGGCCTGGATGCACCCAGAGGCAACTGCTCATCTTCTGCTTGGCCAGTCCCGAGCCCTAAGGTaGAGGGCAGAGCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: DGGAWMHPEATAHLLLGQSRALR*RAEPVG
Trigger: TCCCACAGGCTCTGCCCTGCACCTTAGGGCTCGGGA...CTGGCCAAGCAGAAGATGAGCAGTTGCCTCTGGGTGCATCCAGGCCCCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CCCCGTTGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTCATCCCAGGCTGCGCTaGCAGCAAAGGCGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PRCSSPVPAGPWVPRGFPHPRLR*QQRRAG
Trigger: ACCTGCACGCCTTTGCTGGCAGCGCAGCCTGGGATG...AGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR CCA 90 bp TCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTGGGAGACGTAGACCACACTaGTGTCGGGGTCGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: SSTGTVRKAGRWLRPGPGRRRPH*CRGRRR
Trigger: CCTTCTACGACCCCGACACCAGTGTGGTCTACGTCT...CCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp AGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAACCCGGTGCGACCCGCTaGCAGAAGCTGAGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RGRGARLGVDILHRNSEEPGATR*QKLSGK
Trigger: CTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGG...TTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp ACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTAACAGTGAGGAAAGCTaGGCGCTGGCTTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TSSTGTVRKAGRWLRPGPNSEES*ALASAW
Trigger: CCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTT...AGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGCAGTGGTCGGGGAGATaGTCCCTCAGAGGTCGAGGA +
Preference number: 4 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQQWSGR*SLRGRG
Trigger: TCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CTGCATGGCCTGCTCACCGTGCTCAAACTTCACCCCAGTGAGGCTGAACCTGACCAGAGGGCTGGGCAGTaGTCGGGGAGATGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LHGLLTVLKLHPSEAEPDQRAGQ*SGRWSL
Trigger: GAGGGACCATCTCCCCGACCACTGCCCAGCCCTCTG...GTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAGCACGGTGAGCAGGCCATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp AGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAGAGGGAGCAGAGGGCTaGGCAGTGGTCGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: RGRGARLGVDILHRNSEEEGAEG*AVVGEM
Trigger: CATCTCCCCGACCACTGCCCAGCCCTCTGCTCCCTC...TTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp AGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAGGGGAGCAATGCCTGTaGGGCTGCTCACTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RGRGARLGVDILHRNSEEGEQCL*GCSLPP
Trigger: TGGGGGCAGTGAGCAGCCCCACAGGCATTGCTCCCC...TTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp CGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGCCAGGAACTTGGGGTTaGCGGCGCAGAAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RGARLGVDILHRNSEESWPGTWG*RRRRCC
Trigger: ACAGCACCTTCTGCGCCGTCAACCCCAAGTTCCTGG...CCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp AGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAATGGGGTGCCAGGCGATaGTGCCCACTCGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: RGRGARLGVDILHRNSEEWGARR*CPLAWC
Trigger: ACACCAAGCGAGTGGGCATCATCGCCTGGCACCCCA...TTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CAGGGCCCCGTTGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTGCCCACATTCCAGATaGGTACCACGTTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: QGPVARVQFLQGHGFLEVCPHSR*VPRCRS
Trigger: GCTGCGACAACGTGGTACTCATCTGGAATGTGGGCA...AACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp AGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGTGCTCGTCTGCAGTaGAGGGTGGCCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RGRGARLGVDILHRNSEESARLQ*RVAQAS
Trigger: GGAAGCCTGGGCCACCCTTCACTGCAGACGAGCACT...TTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGTCTGCCGGACCACTTTaGGGAAGGACATGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: LRGRGARLGVDILHRNSESAGPL*GRTCRG
Trigger: CCCCCGACATGTCCTTCCGCAAAGTGGTCCGGCAGA...CTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp AAGCTGAGTGGGAAGGGGGCGGCGGAGGAGATGAAGGTGGCGTGTGGCTGTGGCACACATGCCGGAATTTaGTCTGCCGGACCACTTTGC +
Preference number: 4 (lower is better)
Translates to: KLSGKGAAEEMKVACGCGTHAGI*SAGPLC
Trigger: GCAAAGTGGTCCGGCAGAGCAAATTCCGGCATGTGT...GCCACAGCCACACGCCACCTTCATCTCCTCCGCCGCCCCCTTCCCACTCAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCAGGTCCCGCTGCTTTCGTTCTTGACCGGCTaGCCGAACACATGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: GPAVRQHVAPADLQVPLLSFLTG*PNTCRN
Trigger: ATTCCGGCATGTGTTCGGGCAGCCGGTCAAGAACGA...AAGCAGCGGGACCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGGGTAGGCCTTGTCAATaGGGCCCGTCTTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQGRPCQ*GPSCLG
Trigger: CCCTAAGCAAGACGGGCCGCATTGACAAGGCCTACC...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp GGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCAGGTCCCGCTGCTTGAACACCTTGCCATCTaGCAGGAAGATGGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: GPAVRQHVAPADLQVPLLEHLAI*QEDGPH
Trigger: ATGCGGGCCATCTTCCTGGCAGATGGCAAGGTGTTC...AAGCAGCGGGACCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CTGCATGGCCTGCTCACCGTGCTCAAACTTCACCCCAGTGAGGCTGAACCTGACCTGCCCATACCCCGCTaGGGCTCCTTGCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: LHGLLTVLKLHPSEAEPDLPIPR*GSLLVN
Trigger: GTTCACCAGCAAGGAGCCGCAGCGGGGTATGGGCAG...GTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAGCACGGTGAGCAGGCCATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp AGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAACTGCCCATACCCCGCTaGGGCTCCTTGCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: RGRGARLGVDILHRNSEELPIPR*GSLLVN
Trigger: GTTCACCAGCAAGGAGCCGCAGCGGGGTATGGGCAG...TTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp AGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAACATCCCCGTTCTCCATaGGGCCCAGCTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RGRGARLGVDILHRNSEEHPRSP*GPAAPP
Trigger: TGGAGGAGCAGCTGGGCCGCATGGAGAACGGGGATG...TTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp CTGCATGGCCTGCTCACCGTGCTCAAACTTCACCCCAGTGAGGCTGAACCTGACCATCCCCGTTCTCCATaGGGCCCAGCTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LHGLLTVLKLHPSEAEPDHPRSP*GPAAPP
Trigger: TGGAGGAGCAGCTGGGCCGCATGGAGAACGGGGATG...GTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAGCACGGTGAGCAGGCCATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GACCAGGTAAGGGCCTTCCCAGGGCTCCTGACAGGGGCCTGGTCCGGTATGGGGAGCTGGATGCAGCCTTaGATGTGTTCTCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DQVRAFPGLLTGAWSGMGSWMQP*MCSQVF
Trigger: GAAGACCTGAGAACACATGCAAGGCTGCATCCAGCT...CCCCATACCGGACCAGGCCCCTGTCAGGAGCCCTGGGAAGGCCCTTACCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp AGCCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCCCTGATGTCTATCACTaGAGCCCACCCCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: SLQATIRDVVIVCVLLILPDVYH*SPPQHP
Trigger: GGGGTGCTGGGGTGGGCTGCAGTGATAGACATCAGG...GAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GATGGAGGGGCCTGGATGCACCCAGAGGCAACTGCTCATCTTCTGCTTGGCCAGGCCTCTCCACATTGCTaGTCGCCTTCCCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: DGGAWMHPEATAHLLLGQASPHC*SPSPGS
Trigger: TGACCCTGGGGAAGGCGAGCAGCAATGTGGAGAGGC...CTGGCCAAGCAGAAGATGAGCAGTTGCCTCTGGGTGCATCCAGGCCCCTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp TGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCGTTCCTGCAGGGCCATaGGTTCCTCGAGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: WSGRWSLRGRGARLGVDIVPAGP*VPRGFL
Trigger: CAGAAAACCTCGAGGAACCCATGGCCCTGCAGGAAC...GATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000393893.5
CDS-3UTR CCA 90 bp TGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCAGACGTAGACCACACTaGTGTCGGGGTCGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: WSGRWSLRGRGARLGVDIRRRPH*CRGRRR
Trigger: CCTTCTACGACCCCGACACCAGTGTGGTCTACGTCT...GATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp AAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCACCTCCAGGCCCCGCTTaGGCATGCTGCCCATACCCC +
Preference number: 4 (lower is better)
Translates to: KGSASAILLLGLTSSLGPPPGPA*ACCPYP
Trigger: GGGGTATGGGCAGCATGCCCAAGCGGGGCCTGGAGG...TGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp AAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCAGGTCCCGCTGCTTGCTaGGCACGTAGGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: KGSASAILLLGLTSSLGPGPAAC*ARRPPA
Trigger: TGCGGGAGGCCTACGTGCCCAGCAAGCAGCGGGACC...TGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCCTGTCTGCAGTGAAGGGTaGCCCAGGCTTCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PAGHHPRRGHSLCPAHPPVCSEG*PRLPLP
Trigger: AGGAAGCGGAAGCCTGGGCCACCCTTCACTGCAGAC...AGGAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CTCCAAGGAAGAAGCAGCACCAACTTGAAGCTGGATGCAGCCTTGCATGTGTTCGGGCCTGGTCCGGTATaGGGTGCTGGGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LQGRSSTNLKLDAALHVFGPGPV*GAGGQA
Trigger: GGCCTGGCCCCCAGCACCCCATACCGGACCAGGCCC...GAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCTTCCTTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CCGCCCAGGCTCCAGGAATGCAAGTTCCCGCTCACAGGAAGACCAGGTAAGGGCATTAAGCCACCTGCCTaGGGCCTTCGCACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PPRLQECKFPLTGRPGKGIKPPA*GLRTGC
Trigger: ACAGCCAGTGCGAAGGCCCCAGGCAGGTGGCTTAAT...GCCCTTACCTGGTCTTCCTGTGAGCGGGAACTTGCATTCCTGGAGCCTGGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTATTAAGCCACCTGCCTaGGGCCTTCGCACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RLGVDILHRNSEESWALAIKPPA*GLRTGC
Trigger: ACAGCCAGTGCGAAGGCCCCAGGCAGGTGGCTTAAT...AGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGATCCTCGAGGTTTTCCTaGCACATTGCAGGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRSSRFS*HIAGSQ
Trigger: CTGACTGCCTGCAATGTGCCAGGAAAACCTCGAGGA...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR TCA 90 bp TGCTCATCCTCCTGTCGCTCAAGGTCATTGTCTGTGGACCCCAGCTCAGCTCGGCCAGGAACTTGGGGTTaGCGGCGCAGAAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CSSSCRSRSLSVDPSSARPGTWG*RRRRCC
Trigger: ACAGCACCTTCTGCGCCGTCAACCCCAAGTTCCTGG...CCGAGCTGAGCTGGGGTCCACAGACAATGACCTTGAGCGACAGGAGGATGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp CTGCATGGCCTGCTCACCGTGCTCAAACTTCACCCCAGTGAGGCTGAACCTGACCCGAGCCGCTGGCTATaGCTTCGTCGTTGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LHGLLTVLKLHPSEAEPDPSRWL*LRRCED
Trigger: GTCCTCACAACGACGAAGTCATAGCCAGCGGCTCGG...GTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAGCACGGTGAGCAGGCCATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp CGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTGCCCACATTCCAGATaGGTACCACGTTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: RLGVDILHRNSEESWALACPHSR*VPRCRS
Trigger: GCTGCGACAACGTGGTACTCATCTGGAATGTGGGCA...AGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACTTGTCCTTGCATGCTaGGCAAAACAGGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRLVLAC*AKQAAI
Trigger: AATGGCAGCCTGTTTTGCTCAGCATGCAAGGACAAG...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp GGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCAGGTCCCGCTGCTTTTCTTGGCACAGTCATaGCGATGGGCTCACACTTGC +
Preference number: 4 (lower is better)
Translates to: GPAVRQHVAPADLQVPLLFLAQS*RWAHTC
Trigger: GCAAGTGTGAGCCCATCGTCATGACTGTGCCAAGAA...AAGCAGCGGGACCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CCGCCCAGGCTCCAGGAATGCAAGTTCCCGCTCACAGGAAGACCAGGTAAGGGCCTCAGTTTCCCTGCCTaGCAATCCAGGGGAGCAATG +
Preference number: 4 (lower is better)
Translates to: PPRLQECKFPLTGRPGKGLSFPA*QSRGAM
Trigger: CATTGCTCCCCTGGATTGTCAGGCAGGGAAACTGAG...GCCCTTACCTGGTCTTCCTGTGAGCGGGAACTTGCATTCCTGGAGCCTGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGGAAGCAGCACCAACTTaGAGCTGGATGCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQEAAPT*SWMQPC
Trigger: GCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTC...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp CTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGTGTCGAGCGAGAAGTaGGCTCAGTGCTCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LRGRGARLGVDILHRNSEVSSEK*AQCSSA
Trigger: TGCAGACGAGCACTGAGCTCACTTCTCGCTCGACAC...CTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp CCCCGTTGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTGTGTCGAGCGAGAAGTaGGCTCAGTGCTCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PRCSSPVPAGPWVPRGFPVSSEK*AQCSSA
Trigger: TGCAGACGAGCACTGAGCTCACTTCTCGCTCGACAC...AGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR TCA 90 bp AAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCACAGGCTCTGGCCCTGTaGGATCAGCCCCCATCCCTC +
Preference number: 4 (lower is better)
Translates to: KGSASAILLLGLTSSLGPQALAL*DQPPSL
Trigger: GAGGGATGGGGGCTGATCTCACAGGGCCAGAGCCTG...TGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGACGCCTCTCCACATCAACTTGAAGCTGGATaGAGCCTTGCATGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LASSARTGTCSGLDASPHQLEAG*SLACVL
Trigger: GAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTG...ATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CTGCATGGCCTGCTCACCGTGCTCAAACTTCACCCCAGTGAGGCTGAACCTGACATGGAGGGGCCTGGATaGACCCAGAGGCAACTGCTC +
Preference number: 4 (lower is better)
Translates to: LHGLLTVLKLHPSEAEPDMEGPG*TQRQLL
Trigger: GAGCAGTTGCCTCTGGGTGCATCCAGGCCCCTCCAT...GTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAGCACGGTGAGCAGGCCATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GTGAGAGAAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGCCCGCACGGGGACCTaGTCTGGGCTGGACGCCTCT +
Preference number: 4 (lower is better)
Translates to: VRERFSLCHTPLRSHLFPARTGT*SGLDAS
Trigger: AGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGC...AGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTTCTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGGTCAGCCCGTTCTCTaGGATCTGCCACACCATGAC +
Preference number: 4 (lower is better)
Translates to: RGARLGVDILHRNSEESWGQPVL*DLPHHD
Trigger: GTCATGGTGTGGCAGATCCCAGAGAACGGGCTGACC...CCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGTTCCTCGAGGTTTTCTaGGTCCCAGAGCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LRGRGARLGVDILHRNSEFLEVF*VPERQL
Trigger: CAGCTGGCGCTCTGGGACCCAGAAAACCTCGAGGAA...CTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000393893.5
CDS-3UTR CCA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGGTTCCTGCAGGGCCATaGGTTCCTCGAGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQVPAGP*VPRGFL
Trigger: CAGAAAACCTCGAGGAACCCATGGCCCTGCAGGAAC...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000393893.5
CDS-3UTR CCA 90 bp CGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTCAAAGTACCGGATGCTaGAGTCACCCTTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: RLGVDILHRNSEESWALAQSTGC*SHPCRR
Trigger: TCTGCGGCAAGGGTGACTCCAGCATCCGGTACTTTG...AGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGCAAAGTACCGGATGCTaGAGTCACCCTTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQQSTGC*SHPCRR
Trigger: TCTGCGGCAAGGGTGACTCCAGCATCCGGTACTTTG...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp TGCTCGTCTGCAGTGAAGGGTGGCCCAGGCTTCCGCTTCCTGCCCACATACCCCGAGGTCCGACTTTCTTaGCACAGTCATGACGATGGG +
Preference number: 4 (lower is better)
Translates to: CSSAVKGGPGFRFLPTYPEVRLS*HSHDDG
Trigger: CCCATCGTCATGACTGTGCCAAGAAAGTCGGACCTC...GGGGTATGTGGGCAGGAAGCGGAAGCCTGGGCCACCCTTCACTGCAGACGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp AAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCACTGGCAGAAGCTGAGTaGGAAGGGGGCGGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: KGSASAILLLGLTSSLGPLAEAE*EGGGGG
Trigger: TCCTCCGCCGCCCCCTTCCCACTCAGCTTCTGCCAG...TGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp AAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCAAGCTGGTGTCAGGGCTaGCTCTCCCTGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KGSASAILLLGLTSSLGPSWCQG*LSLRPG
Trigger: CCCAGGCCTCAGGGAGAGCCAGCCCTGACACCAGCT...TGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CCCAGCGGCAGGGTTTCCGTTCCACTCCCAGTCCCTGAGGGCCACAGGCGTGCATCTTTGGGATCCTCTTaGGACAGCCAAGCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: PSGRVSVPLPVPEGHRRASLGSS*DSQAEK
Trigger: CTTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGA...TGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGAACGGAAACCCTGCCGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GACCAGGTAAGGGCCTTCCCAGGGCTCCTGACAGGGGCCTGGTCCGGTATGGGGTCTTTGGGATCCTCTTaGGACAGCCAAGCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: DQVRAFPGLLTGAWSGMGSLGSS*DSQAEK
Trigger: CTTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGA...CCCCATACCGGACCAGGCCCCTGTCAGGAGCCCTGGGAAGGCCCTTACCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCCTTGGTGTGGGGCAGGCTaGGTGACCAAGACCACTTTC +
Preference number: 4 (lower is better)
Translates to: PAGHHPRRGHSLCPAHPPWCGAG*VTKTTF
Trigger: GAAAGTGGTCTTGGTCACCCAGCCTGCCCCACACCA...AGGAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp AAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCATGGGGTGCCAGGCGATaGTGCCCACTCGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: KGSASAILLLGLTSSLGPWGARR*CPLAWC
Trigger: ACACCAAGCGAGTGGGCATCATCGCCTGGCACCCCA...TGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp CGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTTCTTGGCACAGTCATaGCGATGGGCTCACACTTGC +
Preference number: 4 (lower is better)
Translates to: RLGVDILHRNSEESWALAFLAQS*RWAHTC
Trigger: GCAAGTGTGAGCCCATCGTCATGACTGTGCCAAGAA...AGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CTGCATGGCCTGCTCACCGTGCTCAAACTTCACCCCAGTGAGGCTGAACCTGACGGAGCCCAGCTCAGGTaGGAGAAAGGTTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LHGLLTVLKLHPSEAEPDGAQLR*EKGSAS
Trigger: AGAGGCTGAACCTTTCTCTCACCTGAGCTGGGCTCC...GTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAGCACGGTGAGCAGGCCATGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTACACATGCCGGAATTTaGTCTGCCGGACCACTTTGC +
Preference number: 4 (lower is better)
Translates to: RLGVDILHRNSEESWALATHAGI*SAGPLC
Trigger: GCAAAGTGGTCCGGCAGAGCAAATTCCGGCATGTGT...AGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR GCA 90 bp TGCTCATCCTCCTGTCGCTCAAGGTCATTGTCTGTGGACCCCAGCTCAGCTCGGCCGTTCTCTGGGATCTaGCACACCATGACCGTGCAG +
Preference number: 4 (lower is better)
Translates to: CSSSCRSRSLSVDPSSARPFSGI*HTMTVQ
Trigger: CTGCACGGTCATGGTGTGGCAGATCCCAGAGAACGG...CCGAGCTGAGCTGGGGTCCACAGACAATGACCTTGAGCGACAGGAGGATGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CCGCCCAGGCTCCAGGAATGCAAGTTCCCGCTCACAGGAAGACCAGGTAAGGGCGTTTTCCTGGCACATTaGAGGCAGTCAGGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PPRLQECKFPLTGRPGKGVFLAH*RQSGQA
Trigger: TGCTTGGCCTGACTGCCTGCAATGTGCCAGGAAAAC...GCCCTTACCTGGTCTTCCTGTGAGCGGGAACTTGCATTCCTGGAGCCTGGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR CCA 90 bp AGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAGGTCAGCCCGTTCTCTaGGATCTGCCACACCATGAC +
Preference number: 4 (lower is better)
Translates to: RGRGARLGVDILHRNSEEGQPVL*DLPHHD
Trigger: GTCATGGTGTGGCAGATCCCAGAGAACGGGCTGACC...TTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp AAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCATCCGAGGCTTACCATTaGTCCGCAGGCCCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: KGSASAILLLGLTSSLGPSEAYH*SAGPSV
Trigger: CACGGAGGGGCCTGCGGACCAATGGTAAGCCTCGGA...TGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp TGCTCATCCTCCTGTCGCTCAAGGTCATTGTCTGTGGACCCCAGCTCAGCTCGGTGCTCATCTTCTGCTTaGCCAGGTCCCCAAACGGGG +
Preference number: 4 (lower is better)
Translates to: CSSSCRSRSLSVDPSSARCSSSA*PGPQTG
Trigger: CCCCGTTTGGGGACCTGGCCAAGCAGAAGATGAGCA...CCGAGCTGAGCTGGGGTCCACAGACAATGACCTTGAGCGACAGGAGGATGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CTCAAACTTCACCCCAGTGAGGCTGAACCTGACCTTAACCTCTACCCTGATGTCAGAGGGCTCAGCACCTaGGGTGGGGCCTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LKLHPSEAEPDLNLYPDVRGLST*GGAWCG
Trigger: CCCACACCAGGCCCCACCCCAGGTGCTGAGCCCTCT...GACATCAGGGTAGAGGTTAAGGTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GTGAGAGAAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTAGAGGGCTCAGCACCTaGGGTGGGGCCTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: VRERFSLCHTPLRSHLFPRGLST*GGAWCG
Trigger: CCCACACCAGGCCCCACCCCAGGTGCTGAGCCCTCT...AGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTTCTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CCCCGTTGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTGTTCCTGCAGGGCCATaGGTTCCTCGAGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PRCSSPVPAGPWVPRGFPVPAGP*VPRGFP
Trigger: AGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAAC...AGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CTGCATGGCCTGCTCACCGTGCTCAAACTTCACCCCAGTGAGGCTGAACCTGACTGCCCACATTCCAGATaGGTACCACGTTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: LHGLLTVLKLHPSEAEPDCPHSR*VPRCRS
Trigger: GCTGCGACAACGTGGTACTCATCTGGAATGTGGGCA...GTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAGCACGGTGAGCAGGCCATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp AGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAATGCCCACATTCCAGATaGGTACCACGTTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: RGRGARLGVDILHRNSEECPHSR*VPRCRS
Trigger: GCTGCGACAACGTGGTACTCATCTGGAATGTGGGCA...TTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR TCA 90 bp CTCAAACTTCACCCCAGTGAGGCTGAACCTGACCTTAACCTCTACCCTGATGTCCGATCTCGCACTTGCTaGCCTCCAGGCCCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: LKLHPSEAEPDLNLYPDVRSRTC*PPGPAW
Trigger: CCAAGCGGGGCCTGGAGGTCAGCAAGTGCGAGATCG...GACATCAGGGTAGAGGTTAAGGTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp GAGCAATGCCTGTGGGGCTGCTCACTGCCCCCAGACCTTCTGCACATGTGTGACTTCTTGGCACAGTCATaGCGATGGGCTCACACTTGC +
Preference number: 4 (lower is better)
Translates to: EQCLWGCSLPPDLLHMCDFLAQS*RWAHTC
Trigger: GCAAGTGTGAGCCCATCGTCATGACTGTGCCAAGAA...GTCACACATGTGCAGAAGGTCTGGGGGCAGTGAGCAGCCCCACAGGCATTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCAATGTGGGGTAGGCCTTGTCAATaGGGCCCGTCTTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: SASAILLLGLTSSLGPMWGRPCQ*GPSCLG
Trigger: CCCTAAGCAAGACGGGCCGCATTGACAAGGCCTACC...CCACATTGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCGAAAGGTTCAGCCTCTaGCATACTCCTCTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: WSGRWSLRGRGARLGVDIERFSL*HTPLRS
Trigger: AGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTTC...GATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCAATGTGGCCCAGGCTCCAGGAATaGAAGTTCCCGCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: SASAILLLGLTSSLGPMWPRLQE*KFPLTG
Trigger: TCCTGTGAGCGGGAACTTGCATTCCTGGAGCCTGGG...CCACATTGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TGCTCATCCTCCTGTCGCTCAAGGTCATTGTCTGTGGACCCCAGCTCAGCTCGGGCACCCAGAGGCAACTaGTCATCTTCTGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: CSSSCRSRSLSVDPSSARAPRGN*SSSAWP
Trigger: TGGCCAAGCAGAAGATGAGCAGTTGCCTCTGGGTGC...CCGAGCTGAGCTGGGGTCCACAGACAATGACCTTGAGCGACAGGAGGATGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTCACTGTAGCCCCTGCTCAAGGTaGCCTGGAGGTCACTATGCA +
Preference number: 4 (lower is better)
Translates to: CSSPVPAGPWVPRGFPHCSPCSR*PGGHYA
Trigger: TGCATAGTGACCTCCAGGGCACCTTGAGCAGGGGCT...ACAGTGAGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537042.5
CDS-3UTR CCA 90 bp TCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCAATGTGGGGTCAGCCCGTTCTCTaGGATCTGCCACACCATGAC +
Preference number: 4 (lower is better)
Translates to: SASAILLLGLTSSLGPMWGQPVL*DLPHHD
Trigger: GTCATGGTGTGGCAGATCCCAGAGAACGGGCTGACC...CCACATTGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp CTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAGGTCCGACTTTCTTaGCACAGTCATGACGATGGG +
Preference number: 4 (lower is better)
Translates to: LRGRGARLGVDILHRNSEEVRLS*HSHDDG
Trigger: CCCATCGTCATGACTGTGCCAAGAAAGTCGGACCTC...CTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CCCCGTTGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTGAGGTCCGACTTTCTTaGCACAGTCATGACGATGGG +
Preference number: 4 (lower is better)
Translates to: PRCSSPVPAGPWVPRGFPEVRLS*HSHDDG
Trigger: CCCATCGTCATGACTGTGCCAAGAAAGTCGGACCTC...AGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CCA 90 bp CTCCAAGGAAGAAGCAGCACCAACTTGAAGCTGGATGCAGCCTTGCATGTGTTCCATCAGCAGCAGTGGTaGTGGAGGCGGGGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: LQGRSSTNLKLDAALHVFHQQQW*WRRGPL
Trigger: TAGGGGCCCCCGCCTCCACCACCACTGCTGCTGATG...GAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCTTCCTTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp GTGAGAGAAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTCTGGCAGAAGCTGAGTaGGAAGGGGGCGGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: VRERFSLCHTPLRSHLFPLAEAE*EGGGGG
Trigger: TCCTCCGCCGCCCCCTTCCCACTCAGCTTCTGCCAG...AGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTTCTCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp CTGCATGGCCTGCTCACCGTGCTCAAACTTCACCCCAGTGAGGCTGAACCTGACATGACTTCGTCGTTGTaGGGACACCAGTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: LHGLLTVLKLHPSEAEPDMTSSL*GHQSMS
Trigger: GGACATCGACTGGTGTCCTCACAACGACGAAGTCAT...GTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAGCACGGTGAGCAGGCCATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp GTGAGAGAAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTAGTGCTCGTCTGCAGTaGAGGGTGGCCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VRERFSLCHTPLRSHLFPSARLQ*RVAQAS
Trigger: GGAAGCCTGGGCCACCCTTCACTGCAGACGAGCACT...AGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTTCTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp TTTTCTCTTTGGGATCCTCTTGGGACAGCCAAGCAGAAAAGGCCAAGGCCTTATTCCACTCCCAGTCCCTaGGGGCCACAGGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: FSLWDPLGTAKQKRPRPYSTPSP*GPQACR
Trigger: CCTGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGA...ATAAGGCCTTGGCCTTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp AGAAGCAGCACCAACTTGAAGCTGGATGCAGCCTTGCATGTGTTCTCAGGTCTTTCAGGTCCCGCTGCTTaGTGGGCACGTAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RSSTNLKLDAALHVFSGLSGPAA*WARRPP
Trigger: GGGAGGCCTACGTGCCCAGCAAGCAGCGGGACCTGA...AAGACCTGAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GATGGAGGGGCCTGGATGCACCCAGAGGCAACTGCTCATCTTCTGCTTGGCCAGAGCTGGATGCAGCCTTaGATGTGTTCTCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DGGAWMHPEATAHLLLGQSWMQP*MCSQVF
Trigger: GAAGACCTGAGAACACATGCAAGGCTGCATCCAGCT...CTGGCCAAGCAGAAGATGAGCAGTTGCCTCTGGGTGCATCCAGGCCCCTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TTTTCTCTTTGGGATCCTCTTGGGACAGCCAAGCAGAAAAGGCCAAGGCCTTATTGGTCCGGTATGGGGTaGTGGGGGCCAGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FSLWDPLGTAKQKRPRPYWSGMG*WGPGLE
Trigger: CTCCAGGCCTGGCCCCCAGCACCCCATACCGGACCA...ATAAGGCCTTGGCCTTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGAGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp AAGCTGAGTGGGAAGGGGGCGGCGGAGGAGATGAAGGTGGCGTGTGGCTGTGGCTTTATTTCAAATGGTTaGCTGATGCCTGTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: KLSGKGAAEEMKVACGCGFISNG*LMPVVG
Trigger: CCCAACCACAGGCATCAGGCAACCATTTGAAATAAA...GCCACAGCCACACGCCACCTTCATCTCCTCCGCCGCCCCCTTCCCACTCAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp TTCACCCCAGTGAGGCTGAACCTGACCTTAACCTCTACCCTGATGTCTATCACTGAGGGAGCAGAGGGCTaGGCAGTGGTCGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: FTPVRLNLTLTSTLMSITEGAEG*AVVGEM
Trigger: CATCTCCCCGACCACTGCCCAGCCCTCTGCTCCCTC...AGTGATAGACATCAGGGTAGAGGTTAAGGTCAGGTTCAGCCTCACTGGGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GTGAGAGAAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTTCTGCCGGACCACTTTaGGGAAGGACATGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: VRERFSLCHTPLRSHLFPSAGPL*GRTCRG
Trigger: CCCCCGACATGTCCTTCCGCAAAGTGGTCCGGCAGA...AGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTTCTCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TTCACCCCAGTGAGGCTGAACCTGACCTTAACCTCTACCCTGATGTCTATCACTGTGGGAACTGACCCCTaGGCTGCCTCAGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: FTPVRLNLTLTSTLMSITVGTDP*AASEAL
Trigger: CAGAGCCTCTGAGGCAGCGCAGGGGTCAGTTCCCAC...AGTGATAGACATCAGGGTAGAGGTTAAGGTCAGGTTCAGCCTCACTGGGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp GTGAGAGAAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTATGGAGGGGCCTGGATaGACCCAGAGGCAACTGCTC +
Preference number: 4 (lower is better)
Translates to: VRERFSLCHTPLRSHLFPMEGPG*TQRQLL
Trigger: GAGCAGTTGCCTCTGGGTGCATCCAGGCCCCTCCAT...AGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTTCTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp CTCAAACTTCACCCCAGTGAGGCTGAACCTGACCTTAACCTCTACCCTGATGTCCCTGATGTCTATCACTaGAGCCCACCCCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: LKLHPSEAEPDLNLYPDVPDVYH*SPPQHP
Trigger: GGGGTGCTGGGGTGGGCTGCAGTGATAGACATCAGG...GACATCAGGGTAGAGGTTAAGGTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TTCACCCCAGTGAGGCTGAACCTGACCTTAACCTCTACCCTGATGTCTATCACTTCCCGAGCCCTAAGGTaGAGGGCAGAGCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: FTPVRLNLTLTSTLMSITSRALR*RAEPVG
Trigger: TCCCACAGGCTCTGCCCTGCACCTTAGGGCTCGGGA...AGTGATAGACATCAGGGTAGAGGTTAAGGTCAGGTTCAGCCTCACTGGGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TTTCTCTTTGGGATCCTCTTGGGACAGCCAAGCAGAAAAGGCCAAGGCCTTATTGCAGCAGGGCCCCGTTaGTCGAGTCCAGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FLFGILLGQPSRKGQGLIAAGPR*SSPVPA
Trigger: TGCAGGAACTGGACTCGAGCAACGGGGCCCTGCTGC...AATAAGGCCTTGGCCTTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp TTTTCTCTTTGGGATCCTCTTGGGACAGCCAAGCAGAAAAGGCCAAGGCCTTATTCCGAGGCTTACCATTaGTCCGCAGGCCCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: FSLWDPLGTAKQKRPRPYSEAYH*SAGPSV
Trigger: CACGGAGGGGCCTGCGGACCAATGGTAAGCCTCGGA...ATAAGGCCTTGGCCTTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp ACCAACTTGAAGCTGGATGCAGCCTTGCATGTGTTCTCAGGTCTTCTGCCTCAGAAGGAGGTTGCTAGCTaGTGTCAGGGCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: TNLKLDAALHVFSGLLPQKEVAS*CQGWLS
Trigger: GGAGAGCCAGCCCTGACACCAGCTAGCAACCTCCTT...CTGAGGCAGAAGACCTGAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp ACCAACTTGAAGCTGGATGCAGCCTTGCATGTGTTCTCAGGTCTTCTGCCTCAGTCGTTCTTGACCGGCTaGCCGAACACATGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: TNLKLDAALHVFSGLLPQSFLTG*PNTCRN
Trigger: ATTCCGGCATGTGTTCGGGCAGCCGGTCAAGAACGA...CTGAGGCAGAAGACCTGAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TTTTCTCTTTGGGATCCTCTTGGGACAGCCAAGCAGAAAAGGCCAAGGCCTTATCTCGAGTCCAGTTCCTaGAGGGCCATGGGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: FSLWDPLGTAKQKRPRPYLESSS*RAMGSS
Trigger: CGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAG...ATAAGGCCTTGGCCTTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp TTTTCTCTTTGGGATCCTCTTGGGACAGCCAAGCAGAAAAGGCCAAGGCCTTATTGTGGGGCTGCTCACTaGCCCCAGACCTTCTGCACA +
Preference number: 4 (lower is better)
Translates to: FSLWDPLGTAKQKRPRPYCGAAH*PQTFCT
Trigger: TGTGCAGAAGGTCTGGGGGCAGTGAGCAGCCCCACA...ATAAGGCCTTGGCCTTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
3UTR CAA 72 bp GGAAGAAGCAGCACCAACTTGAAGCTGGATGCAGCCTaGCATGTGTTCTCAGGTCTTCTGCCTCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GRSSTNLKLDAA*HVFSGLLPQFP
Trigger: GGGAAACTGAGGCAGAAGACCTGAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp AGAAGCAGCACCAACTTGAAGCTGGATGCAGCCTTGCATGTGTTCTCAGGTCTTTCGTTCTTGACCGGCTaGCCGAACACATGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: RSSTNLKLDAALHVFSGLSFLTG*PNTCRN
Trigger: ATTCCGGCATGTGTTCGGGCAGCCGGTCAAGAACGA...AAGACCTGAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp AAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCAGAAAGGTTCAGCCTCTaGCATACTCCTCTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: KGSASAILLLGLTSSLGPERFSL*HTPLRS
Trigger: AGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTTC...TGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR GCA 90 bp AGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAATTTATTTCAAATGGTTaGCTGATGCCTGTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RGRGARLGVDILHRNSEEFISNG*LMPVVG
Trigger: CCCAACCACAGGCATCAGGCAACCATTTGAAATAAA...TTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp AGAAGCAGCACCAACTTGAAGCTGGATGCAGCCTTGCATGTGTTCTCAGGTCTTAGACGTAGACCACACTaGTGTCGGGGTCGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: RSSTNLKLDAALHVFSGLRRRPH*CRGRRR
Trigger: CCTTCTACGACCCCGACACCAGTGTGGTCTACGTCT...AAGACCTGAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CCA 90 bp TTCACCCCAGTGAGGCTGAACCTGACCTTAACCTCTACCCTGATGTCTATCACTAGACGTAGACCACACTaGTGTCGGGGTCGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: FTPVRLNLTLTSTLMSITRRRPH*CRGRRR
Trigger: CCTTCTACGACCCCGACACCAGTGTGGTCTACGTCT...AGTGATAGACATCAGGGTAGAGGTTAAGGTCAGGTTCAGCCTCACTGGGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR TCA 90 bp TTTTCTCTTTGGGATCCTCTTGGGACAGCCAAGCAGAAAAGGCCAAGGCCTTATCTCAGTTTCCCTGCCTaGCAATCCAGGGGAGCAATG +
Preference number: 4 (lower is better)
Translates to: FSLWDPLGTAKQKRPRPYLSFPA*QSRGAM
Trigger: CATTGCTCCCCTGGATTGTCAGGCAGGGAAACTGAG...ATAAGGCCTTGGCCTTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCCGGTCGCCCTGCTCCTaGACCAGCGCCCTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGRSPCS*TSALRA
Trigger: GGCCCTGAGGGCGCTGGTCAAGGAGCAGGGCGACCG...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp GGTGGGAGGAGCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCGGCAGCAGGGCCCCGTaGCTCGAGTCCAGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: GGRSPGPWRAGCQTTRCAGSRAP*LESSSC
Trigger: GCAGGAACTGGACTCGAGCAACGGGGCCCTGCTGCC...GGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGCTCCTCCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp CTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGACGCCTCTCCACATCGGTCGCCCTGCTCCTaGACCAGCGCCCTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LASSARTGTCSGLDASPHRSPCS*TSALRA
Trigger: GGCCCTGAGGGCGCTGGTCAAGGAGCAGGGCGACCG...ATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp TCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTGGGCGGTCGCCCTGCTCCTaGACCAGCGCCCTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SSTGTVRKAGRWLRPGPGRSPCS*TSALRA
Trigger: GGCCCTGAGGGCGCTGGTCAAGGAGCAGGGCGACCG...CCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCGGACGCCTCTCCACATaGCTGCTCGCCTTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGGRLST*LLAFPR
Trigger: CCTGGGGAAGGCGAGCAGCAATGTGGAGAGGCGTCC...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS GCA 90 bp GTGCAGCGCCCTGCTCAAGGTCCTGGGCCTATCCACAGCCATCCTTaGCCTCCAGAGCCACGTACTGCCACCAGGGTGCCCCGACGGGGG +
Preference number: 5 (lower is better)
Translates to: VQRPAQGPGPIHSHP*PPEPRTATRVPRRG
Trigger: CCCCCGTCGGGGCACCCTGGTGGCAGTACGTGGCTCTGGAGGGCAAGGATGGCTGTGGATAGGCCCAGGACCTTGAGCAGGGCGCTGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545736.2
CDS-3UTR CAA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCCTCTGCCGGACCACTTaGCGGAAGGACATGTCGGGG +
Preference number: 5 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGLCRTT*RKDMSG
Trigger: CCCCGACATGTCCTTCCGCAAAGTGGTCCGGCAGAG...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp ATGCGGCCCAGCTGCTCCTCCAGGCGGCAGATGCGGTCGCCCTGCTCCTTGACCGGACGCCTCTCCACATaGCTGCTCGCCTTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: MRPSCSSRRQMRSPCSLTGRLST*LLAFPR
Trigger: CCTGGGGAAGGCGAGCAGCAATGTGGAGAGGCGTCC...GGTCAAGGAGCAGGGCGACCGCATCTGCCGCCTGGAGGAGCAGCTGGGCCGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS GCA 90 bp TTTCGGGCCGTGGGGTGCCAGGCGATGATGCCCACTCGCTTGGTGTaGCCCTCCAGTACCACCACCGGCTCTGTCAGCGGGGAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: FRAVGCQAMMPTRLV*PSSTTTGSVSGEVS
Trigger: GCTGACCTCCCCGCTGACAGAGCCGGTGGTGGTACTGGAGGGGCACACCAAGCGAGTGGGCATCATCGCCTGGCACCCCACGGCCCGAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000453768.6
ENST00000537042.5
ENST00000545736.2
ENST00000616321.4
ENST00000627576.2
CDS-3UTR CAA 90 bp GGCGTGTGGCTGTGGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCTGCTCCGCCAGGAACTTGGGGTaGACGGCGCAGAAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GVWLWPYASPFSMRPSCSARNLG*TAQKVL
Trigger: CAGCACCTTCTGCGCCGTCAACCCCAAGTTCCTGGC...GGAGCAGCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp TCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCGGCCTGGGCCTGGGGGCAGCAGGGCCCCGTaGCTCGAGTCCAGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSTGTVRKAGRWLRPGPGGSRAP*LESSSC
Trigger: GCAGGAACTGGACTCGAGCAACGGGGCCCTGCTGCC...CCCAGGCCCAGGCCGAAGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp AGCTCCACAGGCCCAGACATTCTAGCCCCGACCGCCTGTGGCCCCCATCCCAAGGGCAGCAGGGCCCCGTaGCTCGAGTCCAGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSTGPDILAPTACGPHPKGSRAP*LESSSC
Trigger: GCAGGAACTGGACTCGAGCAACGGGGCCCTGCTGCC...CTTGGGATGGGGGCCACAGGCGGTCGGGGCTAGAATGTCTGGGCCTGTGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTTCCAGCCATGGCATCTaGGGAAGCAGAGGCACGGGG +
Preference number: 5 (lower is better)
Translates to: ASEALGSQLARCDPLAEASSHGI*GSRGTG
Trigger: CCCCGTGCCTCTGCTTCCCAAGATGCCATGGCTGGA...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CTGGCTTCCTCAGCCCGCACGGGGACCTGCTCTGGGCTGGACGCCTCTCCACATCTCTGCCGGACCACTTaGCGGAAGGACATGTCGGGG +
Preference number: 5 (lower is better)
Translates to: LASSARTGTCSGLDASPHLCRTT*RKDMSG
Trigger: CCCCGACATGTCCTTCCGCAAAGTGGTCCGGCAGAG...ATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp GAAGGTGGCGTGTGGCTGTGGCCCTACGCATCCCCGTTCTCCATGCGGCCCAGCTTCTCAGCCCCACCCTaGCAGCAGCAGGTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: EGGVWLWPYASPFSMRPSFSAPP*QQQVSL
Trigger: CAGGCTGACCTGCTGCTGCAAGGGTGGGGCTGAGAA...GCTGGGCCGCATGGAGAACGGGGATGCGTAGGGCCACAGCCACACGCCACCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR CAA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTAGGGAGGGAAGGAGGTaGCTAGCTGGTGTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: ASEALGSQLARCDPLAEAREGRR*LAGVRA
Trigger: AGCCCTGACACCAGCTAGCAACCTCCTTCCCTCCCT...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CCCAGCGGCAGGGTTTCCGTTCCACTCCCAGTCCCTGAGGGCCACAGGCGTGCATCAATGCGGCCCGTCTaGCTTAGGGGGAGCACCAGA +
Preference number: 5 (lower is better)
Translates to: PSGRVSVPLPVPEGHRRASMRPV*LRGSTR
Trigger: TCTGGTGCTCCCCCTAAGCAAGACGGGCCGCATTGA...TGCACGCCTGTGGCCCTCAGGGACTGGGAGTGGAACGGAAACCCTGCCGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp GGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTGAGTGGGAAGGGGGCTGTCGCTCAAGGTCATaGTCTGTGGACCCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: GSQLARCDPLAEAEWEGGCRSRS*SVDPSS
Trigger: TGAGCTGGGGTCCACAGACAATGACCTTGAGCGACA...GCCCCCTTCCCACTCAGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS TCA 90 bp GCCCACTCTGCCCACCACCCTGGGACAGACGGGTCTCTCCAACTCTaGGGGCCTCAGCTTTCCCATTTGTCATGTGGGCCCTGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: AHSAHHPGTDGSLQL*GPQLSHLSCGPWRG
Trigger: GCCCCTCCAGGGCCCACATGACAAATGGGAAAGCTGAGGCCCTCAGAGTTGGAGAGACCCGTCTGTCCCAGGGTGGTGGGCAGAGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545736.2
CDS GCA 90 bp TGGTCGTTCTTGACCGGCTGCCCGAACACATGCCGGAATTTGCTCTaGCGGACCACTTTGCGGAAGGACATGTCGGGGGCACCGGGGGCG +
Preference number: 5 (lower is better)
Translates to: WSFLTGCPNTCRNLL*RTTLRKDMSGAPGA
Trigger: CGCCCCCGGTGCCCCCGACATGTCCTTCCGCAAAGTGGTCCGGCAGAGCAAATTCCGGCATGTGTTCGGGCAGCCGGTCAAGAACGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000453768.6
ENST00000537042.5
ENST00000545016.2
ENST00000545736.2
ENST00000616321.4
ENST00000627576.2
CDS-3UTR CAA 90 bp TGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCTGCCGGACCACTTaGCGGAAGGACATGTCGGGG +
Preference number: 5 (lower is better)
Translates to: WSGRWSLRGRGARLGVDILCRTT*RKDMSG
Trigger: CCCCGACATGTCCTTCCGCAAAGTGGTCCGGCAGAG...GATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp AGCTCCACAGGCCCAGACATTCTAGCCCCGACCGCCTGTGGCCCCCATCCCAAGTCAATGCGGCCCGTCTaGCTTAGGGGGAGCACCAGA +
Preference number: 5 (lower is better)
Translates to: SSTGPDILAPTACGPHPKSMRPV*LRGSTR
Trigger: TCTGGTGCTCCCCCTAAGCAAGACGGGCCGCATTGA...CTTGGGATGGGGGCCACAGGCGGTCGGGGCTAGAATGTCTGGGCCTGTGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGAATGATGCCCACTCGCTaGGTGTGCCCCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRMMPTR*VCPSST
Trigger: GGTACTGGAGGGGCACACCAAGCGAGTGGGCATCAT...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACAGGGAGGGAAGGAGGTaGCTAGCTGGTGTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDREGRR*LAGVRA
Trigger: AGCCCTGACACCAGCTAGCAACCTCCTTCCCTCCCT...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp GCCTCAGAGGCTCTGGGCAGCCAGCTAGCCCGGTGCGACCCGCTGGCAGAAGCTAACACATGCCGGAATTaGCTCTGCCGGACCACTTTG +
Preference number: 5 (lower is better)
Translates to: ASEALGSQLARCDPLAEANTCRN*LCRTTL
Trigger: CAAAGTGGTCCGGCAGAGCAAATTCCGGCATGTGTT...AGCTTCTGCCAGCGGGTCGCACCGGGCTAGCTGGCTGCCCAGAGCCTCTGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGGCCAGGAACTTGGGGTaGACGGCGCAGAAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQARNLG*TAQKVL
Trigger: CAGCACCTTCTGCGCCGTCAACCCCAAGTTCCTGGC...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACCAGATGAGTACCACGTaGTCGCAGCCTGCACTGAGC +
Preference number: 5 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDQMSTT*SQPALS
Trigger: GCTCAGTGCAGGCTGCGACAACGTGGTACTCATCTG...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp AGCCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCGCCAGGAACTTGGGGTaGACGGCGCAGAAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SLQATIRDVVIVCVLLILARNLG*TAQKVL
Trigger: CAGCACCTTCTGCGCCGTCAACCCCAAGTTCCTGGC...GAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTCAATGCGGCCCGTCTaGCTTAGGGGGAGCACCAGA +
Preference number: 5 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQSMRPV*LRGSTR
Trigger: TCTGGTGCTCCCCCTAAGCAAGACGGGCCGCATTGA...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp CGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTTCAATGCGGCCCGTCTaGCTTAGGGGGAGCACCAGA +
Preference number: 5 (lower is better)
Translates to: RLGVDILHRNSEESWALASMRPV*LRGSTR
Trigger: TCTGGTGCTCCCCCTAAGCAAGACGGGCCGCATTGA...AGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGATGATGCCCACTCGCTaGGTGTGCCCCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQMMPTR*VCPSST
Trigger: GGTACTGGAGGGGCACACCAAGCGAGTGGGCATCAT...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp TCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCAATGTGGGGCAGCAGGGCCCCGTaGCTCGAGTCCAGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SASAILLLGLTSSLGPMWGSRAP*LESSSC
Trigger: GCAGGAACTGGACTCGAGCAACGGGGCCCTGCTGCC...CCACATTGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CAGGGCCCCGTTGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTCTGTCAGACAACACGTaGCGCCGGCTGATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: QGPVARVQFLQGHGFLEVLSDNT*RRLIFR
Trigger: CCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAG...AACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp TGCTCGTCTGCAGTGAAGGGTGGCCCAGGCTTCCGCTTCCTGCCCACATACCCCCTGTCAGACAACACGTaGCGCCGGCTGATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: CSSAVKGGPGFRFLPTYPLSDNT*RRLIFR
Trigger: CCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAG...GGGGTATGTGGGCAGGAAGCGGAAGCCTGGGCCACCCTTCACTGCAGACGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp TCGCTGGTCCTGGGGAGCCGAGGACCAGGTCGCCCTCCGTGTCACTGTCTCTGGAGAAGCAGCACCAACTaGAAGCTGGATGCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: SLVLGSRGPGRPPCHCLWRSSTN*KLDAAL
Trigger: CAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCT...CCAGAGACAGTGACACGGAGGGCGACCTGGTCCTCGGCTCCCCAGGACCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS GCA 90 bp CAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTGGCACATTaGAGGCAGTCAGGCCAAGCAGAACCTCCTCACCCCTGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: QFLQGHGFLEVFLAH*RQSGQAEPPHPWVP
Trigger: TGGGACCCAGGGGTGAGGAGGTTCTGCTTGGCCTGACTGCCTGCAATGTGCCAGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS CCA 90 bp CTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTaGCACATTGCAGGCAGTCAGGCCAAGCAGAACCTCCTCACCCCC +
Preference number: 5 (lower is better)
Translates to: LESSSCRAMGSSRFS*HIAGSQAKQNLLTP
Trigger: GGGGGTGAGGAGGTTCTGCTTGGCCTGACTGCCTGCAATGTGCCAGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539970.1
CDS-3UTR CAA 90 bp AGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAACTCTGCCGGACCACTTaGCGGAAGGACATGTCGGGG +
Preference number: 5 (lower is better)
Translates to: RGRGARLGVDILHRNSEELCRTT*RKDMSG
Trigger: CCCCGACATGTCCTTCCGCAAAGTGGTCCGGCAGAG...TTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp GATGGAGGGGCCTGGATGCACCCAGAGGCAACTGCTCATCTTCTGCTTGGCCAGATGATGCCCACTCGCTaGGTGTGCCCCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: DGGAWMHPEATAHLLLGQMMPTR*VCPSST
Trigger: GGTACTGGAGGGGCACACCAAGCGAGTGGGCATCAT...CTGGCCAAGCAGAAGATGAGCAGTTGCCTCTGGGTGCATCCAGGCCCCTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGCGCTGGCTCAGATGAGTACCACGTaGTCGCAGCCTGCACTGAGC +
Preference number: 5 (lower is better)
Translates to: RLGVDILHRNSEESWALAQMSTT*SQPALS
Trigger: GCTCAGTGCAGGCTGCGACAACGTGGTACTCATCTG...AGCCAGCGCCCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp GGGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCATGATGCGCACGCTCTaGTCCTTGCATGCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: GMGHQDRPLQCGDMEALAMMRTL*SLHAEQ
Trigger: TTGCTCAGCATGCAAGGACAAGAGCGTGCGCATCAT...GGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp AAGCTGAGTGGGAAGGGGGCGGCGGAGGAGATGAAGGTGGCGTGTGGCTGTGGCATGATGCGCACGCTCTaGTCCTTGCATGCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: KLSGKGAAEEMKVACGCGMMRTL*SLHAEQ
Trigger: TTGCTCAGCATGCAAGGACAAGAGCGTGCGCATCAT...GCCACAGCCACACGCCACCTTCATCTCCTCCGCCGCCCCCTTCCCACTCAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp GGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCAGGTCATGATGCGCACGCTCTaGTCCTTGCATGCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: GHGGPAVRQHVAPADLQVMMRTL*SLHAEQ
Trigger: TTGCTCAGCATGCAAGGACAAGAGCGTGCGCATCAT...GACCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp GTGAGAGAAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTCGGTCGCCCTGCTCCTaGACCAGCGCCCTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: VRERFSLCHTPLRSHLFPRSPCS*TSALRA
Trigger: GGCCCTGAGGGCGCTGGTCAAGGAGCAGGGCGACCG...AGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTTCTCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACAGAAGCAGCACCAACTaGAAGCTGGATGCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: QWSGRWSLRGRGARLGVDRSSTN*KLDAAL
Trigger: CAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCT...GTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CCGCCCAGGCTCCAGGAATGCAAGTTCCCGCTCACAGGAAGACCAGGTAAGGGCAGGCCAAGGCCTTATTaGGTCAACCAGGCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: PPRLQECKFPLTGRPGKGRPRPY*VNQALA
Trigger: GGCCAGAGCCTGGTTGACCAAATAAGGCCTTGGCCT...GCCCTTACCTGGTCTTCCTGTGAGCGGGAACTTGCATTCCTGGAGCCTGGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS CCA 90 bp CTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTaGCACATTGCAGGCAGTCAGGCCAAGCAGAACCTCCTCACCCCT +
Preference number: 5 (lower is better)
Translates to: LESSSCRAMGSSRFS*HIAGSQAKQNLLTP
Trigger: AGGGGTGAGGAGGTTCTGCTTGGCCTGACTGCCTGCAATGTGCCAGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS-3UTR CAA 90 bp AGCCTGCAGGCCACCATCCGCGACGTGGTCATAGTCTGTGTCCTGCTCATCCTCCAGATGAGTACCACGTaGTCGCAGCCTGCACTGAGC +
Preference number: 5 (lower is better)
Translates to: SLQATIRDVVIVCVLLILQMSTT*SQPALS
Trigger: GCTCAGTGCAGGCTGCGACAACGTGGTACTCATCTG...GAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGCTGTCAGACAACACGTaGCGCCGGCTGATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RGARLGVDILHRNSEESWLSDNT*RRLIFR
Trigger: CCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAG...CCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp GGATGGGACACCAAGACCGGCCTCTACAGTGCGGTGACATGGAGGCCCTGGCCCCTCTTTGGGATCCTCTaGGGACAGCCAAGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: GWDTKTGLYSAVTWRPWPLFGIL*GQPSRK
Trigger: TTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGAG...GGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp GTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGTCGCTCAAGGTCATaGTCTGTGGACCCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: VPQRSRSSPGRRHPPQEQCRSRS*SVDPSS
Trigger: TGAGCTGGGGTCCACAGACAATGACCTTGAGCGACA...CTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGGGCCCCTTCGCGTTCTaGCTCCTCATAATGGCATCC +
Preference number: 5 (lower is better)
Translates to: RGARLGVDILHRNSEESWGPFAF*LLIMAS
Trigger: GGATGCCATTATGAGGAGCAAGAACGCGAAGGGGCC...CCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393893.5
CDS GCA 90 bp CAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTGGCACATTaGAGGCAGTCAGGCCAAGCAGAACCTCCTCACCCCCTAATCCCA +
Preference number: 5 (lower is better)
Translates to: QFLQGHGFLEVFLAH*RQSGQAEPPHPLIP
Trigger: TGGGATTAGGGGGTGAGGAGGTTCTGCTTGGCCTGACTGCCTGCAATGTGCCAGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539970.1
CDS-3UTR CAA 90 bp TGCTCATCCTCCTGTCGCTCAAGGTCATTGTCTGTGGACCCCAGCTCAGCTCGGAGGCCAAGGCCTTATTaGGTCAACCAGGCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: CSSSCRSRSLSVDPSSARRPRPY*VNQALA
Trigger: GGCCAGAGCCTGGTTGACCAAATAAGGCCTTGGCCT...CCGAGCTGAGCTGGGGTCCACAGACAATGACCTTGAGCGACAGGAGGATGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp TCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTGGGGCCAATGTGGCAGATGAGTACCACGTaGTCGCAGCCTGCACTGAGC +
Preference number: 5 (lower is better)
Translates to: SASAILLLGLTSSLGPMWQMSTT*SQPALS
Trigger: GCTCAGTGCAGGCTGCGACAACGTGGTACTCATCTG...CCACATTGGCCCCAGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CCCCGTTGCTCGAGTCCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTATGATGCGCACGCTCTaGTCCTTGCATGCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: PRCSSPVPAGPWVPRGFPMMRTL*SLHAEQ
Trigger: TTGCTCAGCATGCAAGGACAAGAGCGTGCGCATCAT...AGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGGACTCGAGCAACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537042.5
ENST00000616321.4
CDS-3UTR CAA 90 bp GTGAGAGAAAGGTTCAGCCTCTGCCATACTCCTCTTAGGTCTCACCTCTTCCCTCTCCGAGGCTTACCATaGGTCCGCAGGCCCCTCCGT +
Preference number: 5 (lower is better)
Translates to: VRERFSLCHTPLRSHLFPLRGLP*VRRPLR
Trigger: ACGGAGGGGCCTGCGGACCAATGGTAAGCCTCGGAG...AGGGAAGAGGTGAGACCTAAGAGGAGTATGGCAGAGGCTGAACCTTTCTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CTCCAAGGAAGAAGCAGCACCAACTTGAAGCTGGATGCAGCCTTGCATGTGTTCCTCCGAGGCTTACCATaGGTCCGCAGGCCCCTCCGT +
Preference number: 5 (lower is better)
Translates to: LQGRSSTNLKLDAALHVFLRGLP*VRRPLR
Trigger: ACGGAGGGGCCTGCGGACCAATGGTAAGCCTCGGAG...GAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCTTCCTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CTCCAAGGAAGAAGCAGCACCAACTTGAAGCTGGATGCAGCCTTGCATGTGTTCGCCAGGAACTTGGGGTaGACGGCGCAGAAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: LQGRSSTNLKLDAALHVFARNLG*TAQKVL
Trigger: CAGCACCTTCTGCGCCGTCAACCCCAAGTTCCTGGC...GAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCTTCCTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CTCCAAGGAAGAAGCAGCACCAACTTGAAGCTGGATGCAGCCTTGCATGTGTTCTTCTCAGCCCCACCCTaGCAGCAGCAGGTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LQGRSSTNLKLDAALHVFFSAPP*QQQVSL
Trigger: CAGGCTGACCTGCTGCTGCAAGGGTGGGGCTGAGAA...GAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCTTCCTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGAAGCTGGATGCAGCCTaGCATGTGTTCTCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: RGARLGVDILHRNSEESWKLDAA*HVFSGL
Trigger: AAGACCTGAGAACACATGCAAGGCTGCATCCAGCTT...CCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGGAAAGCTGGCTCTTTGGGATCCTCTaGGGACAGCCAAGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: RGARLGVDILHRNSEESWLFGIL*GQPSRK
Trigger: TTTTCTGCTTGGCTGTCCCAAGAGGATCCCAAAGAG...CCAGCTTTCCTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp GCAGTGGTCGGGGAGATGGTCCCTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGATTTTATTTCAAATGGTaGCCTGATGCCTGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: AVVGEMVPQRSRSSPGRRFYFKW*PDACGW
Trigger: CCAACCACAGGCATCAGGCAACCATTTGAAATAAAA...TCTACGCCCAGGCGAGCTCCTCGACCTCTGAGGGACCATCTCCCCGACCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp TGCTCATCCTCCTGTCGCTCAAGGTCATTGTCTGTGGACCCCAGCTCAGCTCGGAAGCTGGATGCAGCCTaGCATGTGTTCTCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: CSSSCRSRSLSVDPSSARKLDAA*HVFSGL
Trigger: AAGACCTGAGAACACATGCAAGGCTGCATCCAGCTT...CCGAGCTGAGCTGGGGTCCACAGACAATGACCTTGAGCGACAGGAGGATGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp AGAAGCAGCACCAACTTGAAGCTGGATGCAGCCTTGCATGTGTTCTCAGGTCTTTCCAGCCATGGCATCTaGGGAAGCAGAGGCACGGGG +
Preference number: 5 (lower is better)
Translates to: RSSTNLKLDAALHVFSGLSSHGI*GSRGTG
Trigger: CCCCGTGCCTCTGCTTCCCAAGATGCCATGGCTGGA...AAGACCTGAGAACACATGCAAGGCTGCATCCAGCTTCAAGTTGGTGCTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CTCAAACTTCACCCCAGTGAGGCTGAACCTGACCTTAACCTCTACCCTGATGTCCTGTCAGACAACACGTaGCGCCGGCTGATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LKLHPSEAEPDLNLYPDVLSDNT*RRLIFR
Trigger: CCTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAG...GACATCAGGGTAGAGGTTAAGGTCAGGTTCAGCCTCACTGGGGTGAAGTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS-3UTR CAA 90 bp CTCAGAGGTCGAGGAGCTCGCCTGGGCGTAGACATCCTCCACAGGAACAGTGAGTTTTATTTCAAATGGTaGCCTGATGCCTGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: LRGRGARLGVDILHRNSEFYFKW*PDACGW
Trigger: CCAACCACAGGCATCAGGCAACCATTTGAAATAAAA...CTCACTGTTCCTGTGGAGGATGTCTACGCCCAGGCGAGCTCCTCGACCTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341356.10
ENST00000616321.4
CDS CAA 72 bp CGGGCCGTGGGGTGCCAGGCGATGATGCCCACTCGCTaGGTGTGCCCCTCCAGTACCACCACCGGCTCTGTC +
Preference number: 6 (lower is better)
Translates to: RAVGCQAMMPTR*VCPSSTTTGSV
Trigger: GACAGAGCCGGTGGTGGTACTGGAGGGGCACACCAAGCGAGTGGGCATCATCGCCTGGCACCCCACGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000453768.6
ENST00000537042.5
ENST00000545736.2
ENST00000616321.4
ENST00000627576.2
CDS GCA 72 bp GTGGGGTGCCAGGCGATGATGCCCACTCGCTTGGTGTaGCCCTCCAGTACCACCACCGGCTCTGTCAGCGGG +
Preference number: 6 (lower is better)
Translates to: VGCQAMMPTRLV*PSSTTTGSVSG
Trigger: CCCGCTGACAGAGCCGGTGGTGGTACTGGAGGGGCACACCAAGCGAGTGGGCATCATCGCCTGGCACCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000453768.6
ENST00000537042.5
ENST00000545736.2
ENST00000616321.4
ENST00000627576.2
CDS GCA 72 bp CGAACACATGCCGGAATTTGCTCTGCCGGACCACTTTaGGGAAGGACATGTCGGGGGCACCGGGGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: RTHAGICSAGPL*GRTCRGHRGRR
Trigger: CCTGCGCCCCCGGTGCCCCCGACATGTCCTTCCGCAAAGTGGTCCGGCAGAGCAAATTCCGGCATGTGTTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000453768.6
ENST00000537042.5
ENST00000545016.2
ENST00000545736.2
ENST00000616321.4
ENST00000627576.2
CDS GCA 72 bp CTAGGAACCACAGGCCTCCCCAGGGTGAACCCTGCCTaGCTGGCCCAGGGTGGGGCCCAAGTCTCAAGTTTG +
Preference number: 6 (lower is better)
Translates to: LGTTGLPRVNPA*LAQGGAQVSSL
Trigger: CAAACTTGAGACTTGGGCCCCACCCTGGGCCAGGCAGGCAGGGTTCACCCTGGGGAGGCCTGTGGTTCCTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453768.6
CDS CAA 72 bp CCGAACACATGCCGGAATTTGCTCTGCCGGACCACTTaGCGGAAGGACATGTCGGGGGCACCGGGGGCGCAG +
Preference number: 6 (lower is better)
Translates to: PNTCRNLLCRTT*RKDMSGAPGAQ
Trigger: CTGCGCCCCCGGTGCCCCCGACATGTCCTTCCGCAAAGTGGTCCGGCAGAGCAAATTCCGGCATGTGTTCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000453768.6
ENST00000537042.5
ENST00000545016.2
ENST00000545736.2
ENST00000616321.4
ENST00000627576.2
CDS TCA 72 bp TTCCAGATGAGTACCACGTTGTCGCAGCCTGGCAGGTaGGGGTTGTCAGCTCGGGCCGGGTGGGTGGCAGGA +
Preference number: 6 (lower is better)
Translates to: FQMSTTLSQPGR*GLSARAGWVAG
Trigger: TCCTGCCACCCACCCGGCCCGAGCTGACAACCCTCACCTGCCAGGCTGCGACAACGTGGTACTCATCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545736.2
CDS CAA 90 bp CCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTGGCACATaGCAGGCAGTCAGGCCAAGCAGAACCTCCTCACCCCTGGGTCCC +
Preference number: 6 (lower is better)
Translates to: PVPAGPWVPRGFPGT*QAVRPSRTSSPLGP
Trigger: GGGACCCAGGGGTGAGGAGGTTCTGCTTGGCCTGACTGCCTGCAATGTGCCAGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616321.4
CDS GCA 72 bp TTGACCGGCTGCCCGAACACATGCCGGAATTTGCTCTaGCGGACCACTTTGCGGAAGGACATGTCGGGGGCA +
Preference number: 6 (lower is better)
Translates to: LTGCPNTCRNLL*RTTLRKDMSGA
Trigger: TGCCCCCGACATGTCCTTCCGCAAAGTGGTCCGGCAGAGCAAATTCCGGCATGTGTTCGGGCAGCCGGTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000453768.6
ENST00000537042.5
ENST00000545016.2
ENST00000545736.2
ENST00000616321.4
ENST00000627576.2
CDS GCA 72 bp CAGGGCCATGGGTTCCTCGAGGTTTTCCTGGCACATTaGAGGCAGTCAGGCCAAGCAGAACCTCCTCACCCC +
Preference number: 6 (lower is better)
Translates to: QGHGFLEVFLAH*RQSGQAEPPHP
Trigger: GGGGTGAGGAGGTTCTGCTTGGCCTGACTGCCTGCAATGTGCCAGGAAAACCTCGAGGAACCCATGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539970.1
ENST00000616321.4
CDS CAA 90 bp CCAGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTGGCACATaGCAGGCAGTCAGGCCAAGCAGAACCTCCTCACCCCCTAATCCC +
Preference number: 6 (lower is better)
Translates to: PVPAGPWVPRGFPGT*QAVRPSRTSSPPNP
Trigger: GGGATTAGGGGGTGAGGAGGTTCTGCTTGGCCTGACTGCCTGCAATGTGCCAGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539970.1
CDS CCA 72 bp AGTTCCTGCAGGGCCATGGGTTCCTCGAGGTTTTCCTaGCACATTGCAGGCAGTCAGGCCAAGCAGAACCTC +
Preference number: 6 (lower is better)
Translates to: SSCRAMGSSRFS*HIAGSQAKQNL
Trigger: GAGGTTCTGCTTGGCCTGACTGCCTGCAATGTGCCAGGAAAACCTCGAGGAACCCATGGCCCTGCAGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539970.1
ENST00000616321.4
CDS CAA 72 bp TCGTTCTTGACCGGCTGCCCGAACACATGCCGGAATTaGCTCTGCCGGACCACTTTGCGGAAGGACATGTCG +
Preference number: 6 (lower is better)
Translates to: SFLTGCPNTCRN*LCRTTLRKDMS
Trigger: CGACATGTCCTTCCGCAAAGTGGTCCGGCAGAGCAAATTCCGGCATGTGTTCGGGCAGCCGGTCAAGAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341356.10
ENST00000393893.5
ENST00000453768.6
ENST00000537042.5
ENST00000545016.2
ENST00000545736.2
ENST00000616321.4
ENST00000627576.2