Pregenerated sensors for CORO1A (Homo sapiens)
Ensembl gene IDs: ENSG00000102879Ensembl transcript IDs: ENST00000219150.10, ENST00000561815.5, ENST00000561849.1, ENST00000562129.1, ENST00000563778.5, ENST00000564446.1, ENST00000564768.1, ENST00000565497.5, ENST00000566619.5, ENST00000567034.5, ENST00000568763.1, ENST00000568982.5, ENST00000569203.5, ENST00000569469.1, ENST00000569970.1, ENST00000570045.5, ENST00000570244.5
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGAAGGGGAAGGTGAGCGGGGCCCACAGTCTGGTTGGGTGGGCTTaGGACTGCCCACTGCCCAAGGAGCATGCTGCGGTCAGGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GKGKVSGAHSLVGWA*DCPLPKEHAAVRAG Trigger: CCCGGCCCTGACCGCAGCATGCTCCTTGGGCAGTGGGCAGTCCCAAGCCCACCCAACCAGACTGTGGGCCCCGCTCACCTTCCCCTTCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000562129.1 ENST00000564768.1 ENST00000567034.5 |
||
| CDS CCA 90 bp | TGGCCTGGGCAAACCCCAGGAGGGCTGGCCACGCATGGCAGAGGTTaGGGGCCGTGCAAGACCCTGGCAGAGTTCCCGCCGGTCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: WPGQTPGGLATHGRG*GPCKTLAEFPPVSV Trigger: GACAGAGACCGGCGGGAACTCTGCCAGGGTCTTGCACGGCCCCCAACCTCTGCCATGCGTGGCCAGCCCTCCTGGGGTTTGCCCAGGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS GCA 90 bp | CGAAACCTCCAGTCTTGGTTCCCAGCCTGGGGGCCCTCGGCTTCCTaGCCCAGCACTCACTGTGTCCCACAGCGCCACCTGCCGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: RNLQSWFPAWGPSAS*PSTHCVPQRHLPLT Trigger: AGTGAGCGGCAGGTGGCGCTGTGGGACACAGTGAGTGCTGGGGCAGGAAGCCGAGGGCCCCCAGGCTGGGAACCAAGACTGGAGGTTTCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000564768.1 ENST00000567034.5 |
||
| CDS CCA 90 bp | ACCTGTGGGAAGGGGAAGGTGAGCGGGGCCCACAGTCTGGTTGGGTaGGCTTGGGACTGCCCACTGCCCAAGGAGCATGCTGCGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TCGKGKVSGAHSLVG*AWDCPLPKEHAAVR Trigger: CCTGACCGCAGCATGCTCCTTGGGCAGTGGGCAGTCCCAAGCCCACCCAACCAGACTGTGGGCCCCGCTCACCTTCCCCTTCCCACAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000562129.1 ENST00000564768.1 ENST00000567034.5 |
||
| CDS GCA 90 bp | CAAACCCCAGGAGGGCTGGCCACGCATGGCAGAGGTTGGGGGCCGTaGAAGACCCTGGCAGAGTTCCCGCCGGTCTCTGTCTCAGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QTPGGLATHGRGWGP*KTLAEFPPVSVSVC Trigger: ACAGACTGAGACAGAGACCGGCGGGAACTCTGCCAGGGTCTTGCACGGCCCCCAACCTCTGCCATGCGTGGCCAGCCCTCCTGGGGTTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS CCA 90 bp | GAGGGCTGGCCACGCATGGCAGAGGTTGGGGGCCGTGCAAGACCCTaGCAGAGTTCCCGCCGGTCTCTGTCTCAGTCTGTCTCTGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EGWPRMAEVGGRARP*QSSRRSLSQSVSAL Trigger: AAGGGCAGAGACAGACTGAGACAGAGACCGGCGGGAACTCTGCCAGGGTCTTGCACGGCCCCCAACCTCTGCCATGCGTGGCCAGCCCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS CCA 90 bp | TCCGGGGACAGCTGCTTCAGCAGGGCTTCCTGTGTGACAGCCATGTaGGGCGCGGGCCCAGCTCTCACCCCGACAACCACTTCCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGDSCFSRASCVTAM*GAGPALTPTTTSSS Trigger: AGAAGAGGAAGTGGTTGTCGGGGTGAGAGCTGGGCCCGCGCCCCACATGGCTGTCACACAGGAAGCCCTGCTGAAGCAGCTGTCCCCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000566619.5 ENST00000567034.5 ENST00000568763.1 |
||
| CDS TCA 90 bp | ACATCCCAGGCCCTGGGATGGTGGTCTTCCCTGGGCAGTGACCTGTaGGGGCCCTCCCGACCAACCAGTGGGAACAACCATCTCACGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TSQALGWWSSLGSDL*GPSRPTSGNNHLTP Trigger: AGGCGTGAGATGGTTGTTCCCACTGGTTGGTCGGGAGGGCCCTCACAGGTCACTGCCCAGGGAAGACCACCATCCCAGGGCCTGGGATGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564768.1 ENST00000567034.5 |
||
| CDS GCA 90 bp | CCAGGCAGGAGCAGAGGTTTGGAAATGGCTTCTTCCGGGGACAGCTaGTTCAGCAGGGCTTCCTGTGTGACAGCCATGTGGGGCGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGRSRGLEMASSGDS*FSRASCVTAMWGAG Trigger: GCCCGCGCCCCACATGGCTGTCACACAGGAAGCCCTGCTGAAGCAGCTGTCCCCGGAAGAAGCCATTTCCAAACCTCTGCTCCTGCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS CCA 90 bp | AATGAGGCCTCCATCTCGGCTCCAGTCCACACTGTAGATCGTGTCTaGGTGCACCTCTGGGCCCAGTGTCAGCATGGCCGCCCCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: NEASISAPVHTVDRV*VHLWAQCQHGRPSA Trigger: GGCACTGGGGCGGCCATGCTGACACTGGGCCCAGAGGTGCACCCAGACACGATCTACAGTGTGGACTGGAGCCGAGATGGAGGCCTCATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000219150.10 ENST00000563778.5 ENST00000564768.1 ENST00000565497.5 ENST00000567034.5 ENST00000568763.1 ENST00000569469.1 ENST00000570045.5 ENST00000570244.5 |
||
| CDS CCA 90 bp | GGCCAGGGAGCCTGTCCCAACTGGCCCCAGGCAGGAGCAGAGGTTTaGAAATGGCTTCTTCCGGGGACAGCTGCTTCAGCAGGGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GQGACPNWPQAGAEV*KWLLPGTAASAGLP Trigger: AGGAAGCCCTGCTGAAGCAGCTGTCCCCGGAAGAAGCCATTTCCAAACCTCTGCTCCTGCCTGGGGCCAGTTGGGACAGGCTCCCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS TCA 90 bp | GGCCCAGTGTCAGCATGGCCGCCCCAGTGCCCACGTCCCACACCATaGTCACGTTGTCACAACCTGCACGTTCCCCACAGTGTCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPVSAWPPQCPRPTP*SRCHNLHVPHSVRS Trigger: GCTTCTGACACTGTGGGGAACGTGCAGGTTGTGACAACGTGATCATGGTGTGGGACGTGGGCACTGGGGCGGCCATGCTGACACTGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000564768.1 ENST00000567034.5 ENST00000568982.5 |
||
| CDS TCA 90 bp | CTCCCGACCAACCAGTGGGAACAACCATCTCACGCCTGGGTAAACTaGGGCCCATGGCCATCCTGCCAGGTGAGTGGCAGAGCAGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LPTNQWEQPSHAWVN*GPWPSCQVSGRAGT Trigger: CGTCCCTGCTCTGCCACTCACCTGGCAGGATGGCCATGGGCCTCAGTTTACCCAGGCGTGAGATGGTTGTTCCCACTGGTTGGTCGGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564768.1 ENST00000567034.5 |
||
| CDS CCA 90 bp | TCACGCCTGGGTAAACTGAGGCCCATGGCCATCCTGCCAGGTGAGTaGCAGAGCAGGGACGAAACCTCCAGTCTTGGTTCCCAGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRLGKLRPMAILPGE*QSRDETSSLGSQPG Trigger: CCCAGGCTGGGAACCAAGACTGGAGGTTTCGTCCCTGCTCTGCCACTCACCTGGCAGGATGGCCATGGGCCTCAGTTTACCCAGGCGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564768.1 ENST00000567034.5 |
||
| CDS TCA 90 bp | AGAGGTAACATCCCAGGCCCTGGGATGGTGGTCTTCCCTGGGCAGTaGCCTGTGAGGGCCCTCCCGACCAACCAGTGGGAACAACCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RGNIPGPGMVVFPGQ*PVRALPTNQWEQPS Trigger: AGATGGTTGTTCCCACTGGTTGGTCGGGAGGGCCCTCACAGGTCACTGCCCAGGGAAGACCACCATCCCAGGGCCTGGGATGTTACCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564768.1 ENST00000567034.5 |
||
| CDS TCA 90 bp | GAGGCTGCTAGGTCGGCCTGCCCAAAGAGCGGTGAGGAGCGTATGTaGAGAGCCCCAGTCTTGAGGAGCAGCCTGTATCTGCTGCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EAARSACPKSGEERM*RAPVLRSSLYLLPR Trigger: TCTCGGCAGCAGATACAGGCTGCTCCTCAAGACTGGGGCTCTTCACATACGCTCCTCACCGCTCTTTGGGCAGGCCGACCTAGCAGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570045.5 |
||
| CDS GCA 90 bp | CGCCCCAGTGCCCACGTCCCACACCATGATCACGTTGTCACAACCTaGACGTTCCCCACAGTGTCAGAAGCCATGAGCCTCCTGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RPSAHVPHHDHVVTT*TFPTVSEAMSLLPS Trigger: TGAGGGCAGGAGGCTCATGGCTTCTGACACTGTGGGGAACGTGCAGGTTGTGACAACGTGATCATGGTGTGGGACGTGGGCACTGGGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000564768.1 ENST00000567034.5 ENST00000568982.5 |
||
| CDS CCA 90 bp | ATCTCAAAGTACCGGATTGAGCTGTCACCCTGTAGGTGGCAGGTGTaGAGGGAGGGTCAATACCAGCGGATGCCCACTGCCCTGGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ISKYRIELSPCRWQV*REGQYQRMPTALAL Trigger: GAGGGCCAGGGCAGTGGGCATCCGCTGGTATTGACCCTCCCTCCACACCTGCCACCTACAGGGTGACAGCTCAATCCGGTACTTTGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564768.1 ENST00000567034.5 |
||
| CDS GCA 90 bp | GTCGCTTCTCCTCCCTGGATCTCCTGGCTTCATCGGGAACACCCCTaGCCTCCTGCTGAAATAATCCGGCATCACGGGCACCTACTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: VASPPWISWLHREHP*PPAEIIRHHGHLLR Trigger: ACGAAGTAGGTGCCCGTGATGCCGGATTATTTCAGCAGGAGGGCAGGGGTGTTCCCGATGAAGCCAGGAGATCCAGGGAGGAGAAGCGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561815.5 |
||
| CDS GCA 90 bp | CCACACGTCCAGTCTAAAGGCACAGCAGGGCCTTGGAGGTGCTTTTaGCTCCCAAACCCAATCCAACCTCCCCACACCTCCTTCAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PHVQSKGTAGPWRCF*LPNPIQPPHTSFRE Trigger: CTCTCTGAAGGAGGTGTGGGGAGGTTGGATTGGGTTTGGGAGGCAAAAGCACCTCCAAGGCCCTGCTGTGCCTTTAGACTGGACGTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS CCA 90 bp | ACCACCTGCCGGCTCATTCCTCAGCCTCTGCAACAGAGCCTGGCGTaGTGTTGCCCCACTGCATGTTTGTTGACTGACTGGCTGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TTCRLIPQPLQQSLA*CCPTACLLTDWLMD Trigger: ATCCATCAGCCAGTCAGTCAACAAACATGCAGTGGGGCAACACCACGCCAGGCTCTGTTGCAGAGGCTGAGGAATGAGCCGGCAGGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569970.1 |
||
| CDS CCA 90 bp | GCGCATTCTTGTCCACACGTCCAGTCTAAAGGCACAGCAGGGCCTTaGAGGTGCTTTTGCCTCCCAAACCCAATCCAACCTCCCCACACC | + |
|
Preference number: 5 (lower is better) Translates to: AHSCPHVQSKGTAGP*RCFCLPNPIQPPHT Trigger: GGTGTGGGGAGGTTGGATTGGGTTTGGGAGGCAAAAGCACCTCCAAGGCCCTGCTGTGCCTTTAGACTGGACGTGTGGACAAGAATGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS GCA 90 bp | TCTTGTCCACACGTCCAGTCTAAAGGCACAGCAGGGCCTTGGAGGTaGTTTTGCCTCCCAAACCCAATCCAACCTCCCCACACCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCPHVQSKGTAGPWR*FCLPNPIQPPHTSF Trigger: GAAGGAGGTGTGGGGAGGTTGGATTGGGTTTGGGAGGCAAAAGCACCTCCAAGGCCCTGCTGTGCCTTTAGACTGGACGTGTGGACAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS CCA 90 bp | CAGAGCCTGGCGTGGTGTTGCCCCACTGCATGTTTGTTGACTGACTaGCTGATGGATGCAGAGCCCGTCCTTCCTAATGGTTCAGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: QSLAWCCPTACLLTD*LMDAEPVLPNGSDS Trigger: TGAGTCTGAACCATTAGGAAGGACGGGCTCTGCATCCATCAGCCAGTCAGTCAACAAACATGCAGTGGGGCAACACCACGCCAGGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569970.1 |
||
| CDS CAA 90 bp | TGGGAAGGGGAAGGTGAGCGGGGCCCACAGTCTGGTTGGGTGGGCTaGGGACTGCCCACTGCCCAAGGAGCATGCTGCGGTCAGGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: WEGEGERGPQSGWVG*GLPTAQGACCGQGR Trigger: CCGGCCCTGACCGCAGCATGCTCCTTGGGCAGTGGGCAGTCCCAAGCCCACCCAACCAGACTGTGGGCCCCGCTCACCTTCCCCTTCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000562129.1 ENST00000564768.1 ENST00000567034.5 |
||
| CDS GCA 72 bp | CCCACAGTCTGGTTGGGTGGGCTTGGGACTGCCCACTaGCCAAGGAGCATGCTGCGGTCAGGGCCGGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PTVWLGGLGTAH*PRSMLRSGPGV Trigger: GACCCCCGGCCCTGACCGCAGCATGCTCCTTGGGCAGTGGGCAGTCCCAAGCCCACCCAACCAGACTGTGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000562129.1 ENST00000564768.1 ENST00000567034.5 |
||
| CDS GCA 72 bp | GGAGGGCTGGCCACGCATGGCAGAGGTTGGGGGCCGTaGAAGACCCTGGCAGAGTTCCCGCCGGTCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GGLATHGRGWGP*KTLAEFPPVSV Trigger: GACAGAGACCGGCGGGAACTCTGCCAGGGTCTTGCACGGCCCCCAACCTCTGCCATGCGTGGCCAGCCCTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS CCA 72 bp | GACCACCTGCCGGCTCATTCTCCATCTTGGCCGCGGTaGTCCCTAGCCCTCGCCTCCGCAGAGCGCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DHLPAHSPSWPR*SLALASAERSG Trigger: CCCAGAGCGCTCTGCGGAGGCGAGGGCTAGGGACCACCGCGGCCAAGATGGAGAATGAGCCGGCAGGTGGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569203.5 |
||
| CDS CAA 90 bp | ATGGCCTGGGCAAACCCCAGGAGGGCTGGCCACGCATGGCAGAGGTaGGGGGCCGTGCAAGACCCTGGCAGAGTTCCCGCCGGTCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: MAWANPRRAGHAWQR*GAVQDPGRVPAGLC Trigger: ACAGAGACCGGCGGGAACTCTGCCAGGGTCTTGCACGGCCCCCAACCTCTGCCATGCGTGGCCAGCCCTCCTGGGGTTTGCCCAGGCCAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS TCA 72 bp | CTTCCGGGGACAGCTGCTTCAGCAGGGCTTCCTGTGTaGCAGCCATGTGGGGCGCGGGCCCAGCTCTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: LPGTAASAGLPV*QPCGARAQLSP Trigger: GGGTGAGAGCTGGGCCCGCGCCCCACATGGCTGTCACACAGGAAGCCCTGCTGAAGCAGCTGTCCCCGGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000566619.5 ENST00000567034.5 ENST00000568763.1 |
||
| CDS GCA 72 bp | CCAAACACGTGGCGGAACTTGCTGGAGCGGACCACCTaGCGGCTCATTTGGGGGCTCCAGCACCCCCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PNTWRNLLERTT*RLIWGLQHPRP Trigger: TGGCCGGGGGTGCTGGAGCCCCCAAATGAGCCGGCAGGTGGTCCGCTCCAGCAAGTTCCGCCACGTGTTTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000561849.1 ENST00000570045.5 |
||
| CDS CCA 72 bp | CTCAGCCGTGAGGGCAGGGTCGGGCCCTGCGGTGGGTaGGTACAGGTCCTCCTGGAACAGGTCCGACTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LSREGRVGPCGG*VQVLLEQVRLS Trigger: CGAAAGTCGGACCTGTTCCAGGAGGACCTGTACCCACCCACCGCAGGGCCCGACCCTGCCCTCACGGCTGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000219150.10 ENST00000562129.1 ENST00000568763.1 ENST00000570045.5 |
||
| CDS CCA 72 bp | GACGGGCTCCCGCAGGGGCAGCATCAGGCCCCCATCTaGGATCTCCCACACCATGACTGTGCAGTCCTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: DGLPQGQHQAPI*DLPHHDCAVLG Trigger: TCCGAGGACTGCACAGTCATGGTGTGGGAGATCCCAGATGGGGGCCTGATGCTGCCCCTGCGGGAGCCCGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000219150.10 ENST00000561815.5 ENST00000563778.5 ENST00000565497.5 ENST00000567034.5 ENST00000568763.1 ENST00000568982.5 ENST00000569203.5 ENST00000569970.1 ENST00000570045.5 |
||
| CDS CCA 72 bp | AAGGTGAGCGGGGCCCACAGTCTGGTTGGGTGGGCTTaGGACTGCCCACTGCCCAAGGAGCATGCTGCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: KVSGAHSLVGWA*DCPLPKEHAAV Trigger: GACCGCAGCATGCTCCTTGGGCAGTGGGCAGTCCCAAGCCCACCCAACCAGACTGTGGGCCCCGCTCACCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000562129.1 ENST00000564768.1 ENST00000567034.5 |
||
| CDS CAA 72 bp | GAAGGTGAGCGGGGCCCACAGTCTGGTTGGGTGGGCTaGGGACTGCCCACTGCCCAAGGAGCATGCTGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: EGERGPQSGWVG*GLPTAQGACCG Trigger: ACCGCAGCATGCTCCTTGGGCAGTGGGCAGTCCCAAGCCCACCCAACCAGACTGTGGGCCCCGCTCACCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000562129.1 ENST00000564768.1 ENST00000567034.5 |
||
| CDS CAA 72 bp | TCGGCCTTGGCCGGCTGTCCAAACACGTGGCGGAACTaGCTGGAGCGGACCACCTGCCGGCTCATTTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SALAGCPNTWRN*LERTTCRLIWG Trigger: CCCCCAAATGAGCCGGCAGGTGGTCCGCTCCAGCAAGTTCCGCCACGTGTTTGGACAGCCGGCCAAGGCCGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000561849.1 ENST00000570045.5 |
||
| CDS CAA 90 bp | CCTGGGGGAAGGAGGAGGAGCCCACGGCCGCTCCAAGCCCTGGCTTaGGCGAAGGCTCGAGGGCAAGGAGGAATAGTTCCCACCCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PGGRRRSPRPLQALA*AKARGQGGIVPTLG Trigger: TCCAAGGGTGGGAACTATTCCTCCTTGCCCTCGAGCCTTCGCCAAAGCCAGGGCTTGGAGCGGCCGTGGGCTCCTCCTCCTTCCCCCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563778.5 |
||
| CDS TCA 72 bp | ATCCCAGGCCCTGGGATGGTGGTCTTCCCTGGGCAGTaGCCTGTGAGGGCCCTCCCGACCAACCAGTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: IPGPGMVVFPGQ*PVRALPTNQWE Trigger: TTCCCACTGGTTGGTCGGGAGGGCCCTCACAGGTCACTGCCCAGGGAAGACCACCATCCCAGGGCCTGGGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564768.1 ENST00000567034.5 |
||
| CDS GCA 72 bp | CCAAACACGTGGCGGAACTTGCTGGAGCGGACCACCTaGCGGCTCATTCTCCATCTTGGCCGCGGTGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PNTWRNLLERTT*RLILHLGRGGP Trigger: GGGACCACCGCGGCCAAGATGGAGAATGAGCCGGCAGGTGGTCCGCTCCAGCAAGTTCCGCCACGTGTTTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569203.5 |
||
| CDS CCA 72 bp | GACACGAACACTGCACGCACGGGCCGGGTCCCCTCGTaGGGACGGTCCTTCTCAGCTACGACAGTGCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: DTNTARTGRVPS*GRSFSATTVPL Trigger: CAAAGGCACTGTCGTAGCTGAGAAGGACCGTCCCCACGAGGGGACCCGGCCCGTGCGTGCAGTGTTCGTGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000219150.10 ENST00000563778.5 ENST00000564768.1 ENST00000565497.5 ENST00000567034.5 ENST00000568763.1 ENST00000570045.5 ENST00000570244.5 |
||
| CDS CCA 72 bp | GGGTCGGGCCCTGCGGTGGGTGGGTACAGGTCCTCCTaGAACAGGTCCGACTTTCGAGGCACTGTCATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSGPAVGGYRSS*NRSDFRGTVMA Trigger: TGCCATGACAGTGCCTCGAAAGTCGGACCTGTTCCAGGAGGACCTGTACCCACCCACCGCAGGGCCCGACCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000219150.10 ENST00000562129.1 ENST00000568763.1 ENST00000570045.5 |
||
| CDS CCA 72 bp | AAGGGGAAGGTGAGCGGGGCCCACAGTCTGGTTGGGTaGGCTTGGGACTGCCCACTGCCCAAGGAGCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: KGKVSGAHSLVG*AWDCPLPKEHA Trigger: AGCATGCTCCTTGGGCAGTGGGCAGTCCCAAGCCCACCCAACCAGACTGTGGGCCCCGCTCACCTTCCCCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000562129.1 ENST00000564768.1 ENST00000567034.5 |
||
| CDS CCA 72 bp | AGCTGCTTCAGCAGGGCTTCCTGTGTGACAGCCATGTaGGGCGCGGGCCCAGCTCTCACCCCGACAACCACT | + |
|
Preference number: 6 (lower is better) Translates to: SCFSRASCVTAM*GAGPALTPTTT Trigger: AGTGGTTGTCGGGGTGAGAGCTGGGCCCGCGCCCCACATGGCTGTCACACAGGAAGCCCTGCTGAAGCAGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000566619.5 ENST00000567034.5 ENST00000568763.1 |
||
| CDS CCA 72 bp | CCACGCATGGCAGAGGTTGGGGGCCGTGCAAGACCCTaGCAGAGTTCCCGCCGGTCTCTGTCTCAGTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PRMAEVGGRARP*QSSRRSLSQSV Trigger: GACAGACTGAGACAGAGACCGGCGGGAACTCTGCCAGGGTCTTGCACGGCCCCCAACCTCTGCCATGCGTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS CAA 72 bp | TCGGCCTTGGCCGGCTGTCCAAACACGTGGCGGAACTaGCTGGAGCGGACCACCTGCCGGCTCATTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SALAGCPNTWRN*LERTTCRLILL Trigger: CAGCAGAATGAGCCGGCAGGTGGTCCGCTCCAGCAAGTTCCGCCACGTGTTTGGACAGCCGGCCAAGGCCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000219150.10 ENST00000565497.5 ENST00000566619.5 ENST00000568763.1 ENST00000568982.5 ENST00000569469.1 ENST00000570244.5 |
||
| CDS CAA 72 bp | ACAGGGGCTGTGTGGCCACAGACCGTGGGCGCATTCTaGTCCACACGTCCAGTCTTGCCCAGGGGCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: TGAVWPQTVGAF*STRPVLPRGST Trigger: GGTGCTGCCCCTGGGCAAGACTGGACGTGTGGACAAGAATGCGCCCACGGTCTGTGGCCACACAGCCCCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000219150.10 ENST00000561815.5 ENST00000563778.5 ENST00000565497.5 ENST00000568982.5 ENST00000569203.5 ENST00000569469.1 ENST00000569970.1 ENST00000570045.5 |
||
| CDS CAA 72 bp | AGGAGGAGGAGCCCACGGCCGCTCCAAGCCCTGGCTTaGGCGAAGGCTCGAGGGCAAGGAGGAATAGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRRSPRPLQALA*AKARGQGGIVP Trigger: GGGAACTATTCCTCCTTGCCCTCGAGCCTTCGCCAAAGCCAGGGCTTGGAGCGGCCGTGGGCTCCTCCTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563778.5 |
||
| CDS CAA 72 bp | TCGGCCTTGGCCGGCTGTCCAAACACGTGGCGGAACTaGCTGGAGCGGACCACCTGCCGGCTCATTCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SALAGCPNTWRN*LERTTCRLILA Trigger: AGCCAGAATGAGCCGGCAGGTGGTCCGCTCCAGCAAGTTCCGCCACGTGTTTGGACAGCCGGCCAAGGCCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561815.5 |
||
| CDS CAA 72 bp | TCGGCCTTGGCCGGCTGTCCAAACACGTGGCGGAACTaGCTGGAGCGGACCACCTGCCGGCTCATTCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SALAGCPNTWRN*LERTTCRLIPQ Trigger: CTGAGGAATGAGCCGGCAGGTGGTCCGCTCCAGCAAGTTCCGCCACGTGTTTGGACAGCCGGCCAAGGCCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569970.1 |
||
| CDS CAA 90 bp | GGGCCAGGGAGCCTGTCCCAACTGGCCCCAGGCAGGAGCAGAGGTTaGGAAATGGCTTCTTCCGGGGACAGCTGCTTCAGCAGGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GPGSLSQLAPGRSRG*EMASSGDSCFSRAS Trigger: GGAAGCCCTGCTGAAGCAGCTGTCCCCGGAAGAAGCCATTTCCAAACCTCTGCTCCTGCCTGGGGCCAGTTGGGACAGGCTCCCTGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS GCA 72 bp | CCAAACACGTGGCGGAACTTGCTGGAGCGGACCACCTaGCGGCTCATTTTCGTGCCAGGGGCTACAGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PNTWRNLLERTT*RLIFVPGATGS Trigger: CGACCCTGTAGCCCCTGGCACGAAAATGAGCCGGCAGGTGGTCCGCTCCAGCAAGTTCCGCCACGTGTTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563778.5 |
||
| CDS GCA 72 bp | CCTGGAAGGCCTGGTGACCGTCACCTAATCAGGACCTaGACAGAGCCATGGGTCCGGTGGAGGAGCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PGRPGDRHLIRT*TEPWVRWRSCS Trigger: GGAGCAGCTCCTCCACCGGACCCATGGCTCTGTGCAGGTCCTGATTAGGTGACGGTCACCAGGCCTTCCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000561849.1 ENST00000568763.1 |
||
| CDS CAA 72 bp | TCGGCCTTGGCCGGCTGTCCAAACACGTGGCGGAACTaGCTGGAGCGGACCACCTGCCGGCTCATTTTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SALAGCPNTWRN*LERTTCRLIFV Trigger: CACGAAAATGAGCCGGCAGGTGGTCCGCTCCAGCAAGTTCCGCCACGTGTTTGGACAGCCGGCCAAGGCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563778.5 |
||
| CDS CAA 72 bp | TCGGCCTTGGCCGGCTGTCCAAACACGTGGCGGAACTaGCTGGAGCGGACCACCTGCCGGCTCATTCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SALAGCPNTWRN*LERTTCRLILH Trigger: ATGGAGAATGAGCCGGCAGGTGGTCCGCTCCAGCAAGTTCCGCCACGTGTTTGGACAGCCGGCCAAGGCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569203.5 |
||
| CDS TCA 72 bp | CAGCCTCGCCCGCTGAAGATGCTCTTGTCAAGACAATaGATGAGAAGCAGCCGTGCGCCCGCCTCCGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QPRPLKMLLSRQ*MRSSRAPASGV Trigger: CACCCCGGAGGCGGGCGCACGGCTGCTTCTCATTCATTGTCTTGACAAGAGCATCTTCAGCGGGCGAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564446.1 |
||
| CDS GCA 72 bp | GGCAGCATCAGGCCCCCATCTGGGATCTCCCACACCTaGAGAGGAGGGGCCAGTGAGTCTTCAGGACTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GSIRPPSGISHT*RGGASESSGLQ Trigger: TTGGAGTCCTGAAGACTCACTGGCCCCTCCTCTGCAGGTGTGGGAGATCCCAGATGGGGGCCTGATGCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000564768.1 |
||
| CDS GCA 72 bp | CCAAACACGTGGCGGAACTTGCTGGAGCGGACCACCTaGCGGCTCATTCCTCAGCCTCTGCAACAGAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PNTWRNLLERTT*RLIPQPLQQSL Trigger: CAGGCTCTGTTGCAGAGGCTGAGGAATGAGCCGGCAGGTGGTCCGCTCCAGCAAGTTCCGCCACGTGTTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569970.1 |
||
| CDS CCA 72 bp | TCCATCTCGGCTCCAGTCCACACTGTAGATCGTGTCTaGGTGCACCTCTGGGCCCAGTGTCAGCATGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SISAPVHTVDRV*VHLWAQCQHGR Trigger: GCGGCCATGCTGACACTGGGCCCAGAGGTGCACCCAGACACGATCTACAGTGTGGACTGGAGCCGAGATGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000219150.10 ENST00000563778.5 ENST00000564768.1 ENST00000565497.5 ENST00000567034.5 ENST00000568763.1 ENST00000569469.1 ENST00000570045.5 ENST00000570244.5 |
||
| CDS CCA 72 bp | GGGAGAGCACCTCTTGCATCATCCCTGCCTGCGAGCTaGGGGACAGAGTTGCTAGGTCCTCAGACAGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GRAPLASSLPAS*GTELLGPQTGP Trigger: TGGGCCTGTCTGAGGACCTAGCAACTCTGTCCCCCAGCTCGCAGGCAGGGATGATGCAAGAGGTGCTCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568763.1 |
||
| CDS TCA 72 bp | TCAGCATGGCCGCCCCAGTGCCCACGTCCCACACCATaGTCACGTTGTCACAACCTGCACGTTCCCCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: SAWPPQCPRPTP*SRCHNLHVPHS Trigger: ACTGTGGGGAACGTGCAGGTTGTGACAACGTGATCATGGTGTGGGACGTGGGCACTGGGGCGGCCATGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000564768.1 ENST00000567034.5 ENST00000568982.5 |
||
| CDS GCA 72 bp | CCTCCCTGGATCTCCTGGCTTCATCGGGAACACCCCTaGCCTCCTGCTGAAATAATCCGGCATCACGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PPWISWLHREHP*PPAEIIRHHGH Trigger: GTGCCCGTGATGCCGGATTATTTCAGCAGGAGGGCAGGGGTGTTCCCGATGAAGCCAGGAGATCCAGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561815.5 |
||
| CDS CCA 72 bp | TACCGGATTGAGCTGTCACCCTGTAGGTGGCAGGTGTaGAGGGAGGGTCAATACCAGCGGATGCCCACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: YRIELSPCRWQV*REGQYQRMPTA Trigger: GGCAGTGGGCATCCGCTGGTATTGACCCTCCCTCCACACCTGCCACCTACAGGGTGACAGCTCAATCCGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564768.1 ENST00000567034.5 |
||
| CDS CCA 72 bp | CCCAACTGGCCCCAGGCAGGAGCAGAGGTTTGGAAATaGCTTCTTCCGGGGACAGCTGCTTCAGCAGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PNWPQAGAEVWK*LLPGTAASAGL Trigger: AAGCCCTGCTGAAGCAGCTGTCCCCGGAAGAAGCCATTTCCAAACCTCTGCTCCTGCCTGGGGCCAGTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS CAA 72 bp | GCCGCCCCAGTGCCCACGTCCCACACCATGATCACGTaGTCACAACCTGCACGTTCCCCACAGTGTCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AAPVPTSHTMIT*SQPARSPQCQK Trigger: CTTCTGACACTGTGGGGAACGTGCAGGTTGTGACAACGTGATCATGGTGTGGGACGTGGGCACTGGGGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000564768.1 ENST00000567034.5 ENST00000568982.5 |
||
| CDS TCA 72 bp | CCTTCTCAGCTACGACAGTGCCTTTGCGGGGCTCGATaGTGCGCACGCGCTTGTCACGGCAGGAGGTACAAA | + |
|
Preference number: 6 (lower is better) Translates to: PSQLRQCLCGAR*CARACHGRRYK Trigger: TTTGTACCTCCTGCCGTGACAAGCGCGTGCGCATCATCGAGCCCCGCAAAGGCACTGTCGTAGCTGAGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000219150.10 ENST00000563778.5 ENST00000564768.1 ENST00000565497.5 ENST00000567034.5 ENST00000568763.1 ENST00000570045.5 ENST00000570244.5 |
||
| CDS TCA 72 bp | AGGTCGGCCTGCCCAAAGAGCGGTGAGGAGCGTATGTaGAGAGCCCCAGTCTTGAGGAGCAGCCTGTATCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSACPKSGEERM*RAPVLRSSLYL Trigger: CAGATACAGGCTGCTCCTCAAGACTGGGGCTCTTCACATACGCTCCTCACCGCTCTTTGGGCAGGCCGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000561849.1 ENST00000570045.5 |
||
| CDS TCA 72 bp | GACAGCGGCTCCTCCAGGTGCTTCTGTAGACACAGGTaGGAGGTAACATCCCAGGCCCTGGGATGGTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: DSGSSRCFCRHR*EVTSQALGWWS Trigger: AGACCACCATCCCAGGGCCTGGGATGTTACCTCTCACCTGTGTCTACAGAAGCACCTGGAGGAGCCGCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564768.1 ENST00000567034.5 |
||
| CDS TCA 72 bp | TCAGCATGGCCGCCCCAGTGCCCACGTCCCACACCATaGTCACGTTGTCACAACCATGACTGTGCAGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SAWPPQCPRPTP*SRCHNHDCAVL Trigger: GAGGACTGCACAGTCATGGTTGTGACAACGTGATCATGGTGTGGGACGTGGGCACTGGGGCGGCCATGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569469.1 |
||
| CDS CCA 72 bp | GGTAAACTGAGGCCCATGGCCATCCTGCCAGGTGAGTaGCAGAGCAGGGACGAAACCTCCAGTCTTGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GKLRPMAILPGE*QSRDETSSLGS Trigger: GGAACCAAGACTGGAGGTTTCGTCCCTGCTCTGCCACTCACCTGGCAGGATGGCCATGGGCCTCAGTTTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564768.1 ENST00000567034.5 |
||
| CDS CCA 72 bp | GGGTTGTTCTTCTCTTGTTCCAGTCCCAAAATGGCCTaGGCAAACCCCAGGAGGGCTGGCCACGCATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLFFSCSSPKMA*ANPRRAGHAWQ Trigger: CTGCCATGCGTGGCCAGCCCTCCTGGGGTTTGCCCAGGCCATTTTGGGACTGGAACAAGAGAAGAACAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS GCA 72 bp | GCCCACGTCCCACACCATGATCACGTTGTCACAACCTaGACGTTCCCCACAGTGTCAGAAGCCATGAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AHVPHHDHVVTT*TFPTVSEAMSL Trigger: GAGGCTCATGGCTTCTGACACTGTGGGGAACGTGCAGGTTGTGACAACGTGATCATGGTGTGGGACGTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000564768.1 ENST00000567034.5 ENST00000568982.5 |
||
| CDS GCA 72 bp | CAGTCTAAAGGCACAGCAGGGCCTTGGAGGTGCTTTTaGCTCCCAAACCCAATCCAACCTCCCCACACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QSKGTAGPWRCF*LPNPIQPPHTS Trigger: GGAGGTGTGGGGAGGTTGGATTGGGTTTGGGAGGCAAAAGCACCTCCAAGGCCCTGCTGTGCCTTTAGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS GCA 72 bp | CACGTCCAGTCTAAAGGCACAGCAGGGCCTTGGAGGTaGTTTTGCCTCCCAAACCCAATCCAACCTCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HVQSKGTAGPWR*FCLPNPIQPPH Trigger: GTGGGGAGGTTGGATTGGGTTTGGGAGGCAAAAGCACCTCCAAGGCCCTGCTGTGCCTTTAGACTGGACGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567034.5 ENST00000568763.1 |
||
| CDS CAA 72 bp | CAACAGAGCCTGGCGTGGTGTTGCCCCACTGCATGTTaGTTGACTGACTGGCTGATGGATGCAGAGCCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: QQSLAWCCPTAC*LTDWLMDAEPV Trigger: GACGGGCTCTGCATCCATCAGCCAGTCAGTCAACAAACATGCAGTGGGGCAACACCACGCCAGGCTCTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569970.1 |
||
| CDS CAA 90 bp | GCAGGACTGTCTGTAGTCCTGGTCACTGGTGTGACCCATCTTGTGTaGGCTCCTTCTGAGCGTCAGTTTCCACACAGCCACAGCACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGLSVVLVTGVTHLV*APSERQFPHSHSTE Trigger: CTCTGTGCTGTGGCTGTGTGGAAACTGACGCTCAGAAGGAGCCAACACAAGATGGGTCACACCAGTGACCAGGACTACAGACAGTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568763.1 |
||
| CDS CCA 72 bp | GCGTGGTGTTGCCCCACTGCATGTTTGTTGACTGACTaGCTGATGGATGCAGAGCCCGTCCTTCCTAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: AWCCPTACLLTD*LMDAEPVLPNG Trigger: ACCATTAGGAAGGACGGGCTCTGCATCCATCAGCCAGTCAGTCAACAAACATGCAGTGGGGCAACACCACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569970.1 |
||
| CDS CAA 72 bp | TCTGTAGTCCTGGTCACTGGTGTGACCCATCTTGTGTaGGCTCCTTCTGAGCGTCAGTTTCCACACAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SVVLVTGVTHLV*APSERQFPHSH Trigger: GTGGCTGTGTGGAAACTGACGCTCAGAAGGAGCCAACACAAGATGGGTCACACCAGTGACCAGGACTACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000561849.1 ENST00000568763.1 |
||