RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CORIN (Homo sapiens)

Ensembl gene IDs: ENSG00000145244

Ensembl transcript IDs: ENST00000273857.9, ENST00000502252.5, ENST00000502726.5, ENST00000503821.5, ENST00000504584.1, ENST00000505754.1, ENST00000505909.5, ENST00000508498.5, ENST00000510974.1, ENST00000515827.1, ENST00000610355.4

Found 525 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTaGTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAG +
Preference number: 1 (lower is better)
Translates to: MQICSARLSISVHEK*FCTALCRQLFTVKK
Trigger: CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
3UTR-3UTR GCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCTTCTGTACAGCTCTCTaGAGGCAGCTCTTCACAGTC +
Preference number: 2 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLFCTAL*RQLFTV
Trigger: GACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAA...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
3UTR-3UTR GCA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATCTAACCTGCACGTTGTaGTCGTGTACCCTAAAATTC +
Preference number: 2 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHLTCTL*SCTLKF
Trigger: GAATTTTAGGGTACACGAGCACAACGTGCAGGTTAG...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
3UTR-3UTR GCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTTCTGTCCATGAAAAGTaGTTCTGTACAGCTCTCTGC +
Preference number: 2 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTSVHEK*FCTALC
Trigger: GCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGA...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
3UTR-3UTR CCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCTTGAGTTGCGTAAAGTaGCCTAGAGCTAAAAATCAT +
Preference number: 2 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLLSCVK*PRAKNH
Trigger: ATGATTTTTAGCTCTAGGCCACTTTACGCAACTCAA...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
3UTR-3UTR GCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGAAATGTTTTACTCCATaGAAAGTCTTACTGTGCTCT +
Preference number: 2 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQKCFTP*KVLLCS
Trigger: AGAGCACAGTAAGACTTTGCATGGAGTAAAACATTT...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
3UTR GCA 72 bp TGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTaGTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACA +
Preference number: 3 (lower is better)
Translates to: CSARLSISVHEK*FCTALCRQLFT
Trigger: TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
3UTR CCA 72 bp AATCTCGCCAGAGTCGATAATTTTGTGCTGCAGTCATaGTTAGGCCTGGCAAAAGGACAAAGTCTGCTTTGT +
Preference number: 3 (lower is better)
Translates to: NLARVDNFVLQS*LGLAKGQSLLC
Trigger: ACAAAGCAGACTTTGTCCTTTTGCCAGGCCTAACCATGACTGCAGCACAAAATTATCGACTCTGGCGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
3UTR-3UTR CAA 90 bp CGTGACCACAATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTATTTGCAGTGCACGATaGAGCATTTCTGTCCATGAA +
Preference number: 3 (lower is better)
Translates to: RDHNSVAGFHTLLRFIQTICSAR*SISVHE
Trigger: TTCATGGACAGAAATGCTCAATCGTGCACTGCAAAT...AGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
3UTR-3UTR CAA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGCTCTTTATGACTTTGTaGGTATGGATGAACGCAAGA +
Preference number: 3 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQLFMTL*VWMNAR
Trigger: TCTTGCGTTCATCCATACCAACAAAGTCATAAAGAG...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
3UTR-3UTR CAA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTATTTGCAGTGCACGATaGAGCATTTCTGTCCATGAA +
Preference number: 3 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTICSAR*SISVHE
Trigger: TTCATGGACAGAAATGCTCAATCGTGCACTGCAAAT...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
3UTR-3UTR CAA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCTGCATTCAATATGTCTaGCTACCTAAATGGATGACA +
Preference number: 3 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLCIQYV*LPKWMT
Trigger: TGTCATCCATTTAGGTAGCAAGACATATTGAATGCA...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
3UTR TCA 72 bp ATCAGCCAACTCATATATCCTGAACAAACCCAGCTATaGGGACAGTTCTATAGAGACTCTTCTATAAAATTA +
Preference number: 3 (lower is better)
Translates to: ISQLIYPEQTQL*GQFYRDSSIKL
Trigger: TAATTTTATAGAAGAGTCTCTATAGAACTGTCCTCATAGCTGGGTTTGTTCAGGATATATGAGTTGGCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCACCCACTCCATGGCGATaGAGCGCCCGTCCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSPTPWR*SARPRS
Trigger: GCTGCGGGGACGGGCGCTGCATCGCCATGGAGTGGG...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR GCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGTTGGGGACCCGGCTCTaGGGCAGCGCTCTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKLGTRL*GSALPE
Trigger: CTCCGGAAGAGCGCTGCCGCAGAGCCGGGTCCCCAA...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGCACACACCCACTCCATaGCGATGCAGCGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKHTPTP*RCSARP
Trigger: GGGACGGGCGCTGCATCGCCATGGAGTGGGTGTGTG...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGGCCACTGCTCCGGGTTaGGCAAGCAGACAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQATAPG*ASRQAG
Trigger: TCCGGCCTGTCTGCTTGCCCAACCCGGAGCAGTGGC...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGTCAGGCTCTAGCCACTaGTCCGGGTTGGGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKSGSSH*SGLGKQ
Trigger: CTGCTTGCCCAACCCGGAGCAGTGGCTAGAGCCTGA...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCTCAAGACCGGCTTTaGGGACCCGGCTCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQSQDRL*GPGSAA
Trigger: TGCCGCAGAGCCGGGTCCCCAAAGCCGGTCTTGAGA...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACACACACACCCACTCCATaGCGATGCAGCGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTHTPTP*RCSARP
Trigger: GGGACGGGCGCTGCATCGCCATGGAGTGGGTGTGTG...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR TCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCATCGCTGCAGTTGCAATaGGCCTCGTCACTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSSLQLQ*ASSLQS
Trigger: CGACTGGAGTGACGAGGCTCATTGCAACTGCAGCGA...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTTCGCTGCAGTTGCAATaGGCCTCGTCACTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAISLQLQ*ASSLQS
Trigger: CGACTGGAGTGACGAGGCTCATTGCAACTGCAGCGA...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGTCGCTGCAGTTGCAATaGGCCTCGTCACTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKSLQLQ*ASSLQS
Trigger: CGACTGGAGTGACGAGGCTCATTGCAACTGCAGCGA...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGACCAGACCCTGGCTGTaGCAGGAGCAGTTGACCTCG +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQTRPWL*QEQLTS
Trigger: CGAGGTCAACTGCTCCTGTCACAGCCAGGGTCTGGT...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR TCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGACCAGACCCTGGCTGTaGCAGGAGCAGTTGACCTCG +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRTRPWL*QEQLTS
Trigger: CGAGGTCAACTGCTCCTGTCACAGCCAGGGTCTGGT...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTCAGAGAACACTGCCATaGCCACCTTCCAGGGCGACT +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIQRTLP*PPSRAT
Trigger: AGTCGCCCTGGAAGGTGGCCATGGCAGTGTTCTCTG...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGCTCCCCTCGAAGCAGTaGGCAACTGTCAGAACCCAC +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKLPSKQ*ATVRTH
Trigger: GTGGGTTCTGACAGTTGCCCACTGCTTCGAGGGGAG...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTCTCCCCTCGAAGCAGTaGGCAACTGTCAGAACCCAC +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAILPSKQ*ATVRTH
Trigger: GTGGGTTCTGACAGTTGCCCACTGCTTCGAGGGGAG...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGACACCACAGGTCACGTaGCACACACGCATGGTTTGC +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKTPQVT*HTRMVC
Trigger: GCAAACCATGCGTGTGTGTCACGTGACCTGTGGTGT...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCATGCTTGCAGGCCAGCTaGCTCAATATCTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSCLQAS*LNISCQ
Trigger: CTGGCAGGAGATATTGAGTCAGCTGGCCTGCAAGCA...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTTGTGGCCCCAGCCTGTaGTATAGCAGTACGTGTCAG +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAICGPSL*YSSTCQ
Trigger: CTGACACGTACTGCTATATCACAGGCTGGGGCCACA...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGTGTGGCCCCAGCCTGTaGTATAGCAGTACGTGTCAG +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKCGPSL*YSSTCQ
Trigger: CTGACACGTACTGCTATATCACAGGCTGGGGCCACA...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAACCAGACCCTGGCTGTaGCAGGCACAGTTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSTRPWL*QAQFCS
Trigger: TGAGCAAAACTGTGCCTGTCACAGCCAGGGTCTGGT...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610355.4
CDS-3UTR GCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGGCAGTTTCCCGGGGATaGAGATTCCACTGGCACACA +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKAVSRG*RFHWHT
Trigger: TGTGTGCCAGTGGAATCTGCATCCCCGGGAAACTGC...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCGTCCCCGCAGCGATaGTCTGTTGTGGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRPSPQR*SVVGLQ
Trigger: TTGCAATCCCACAACAGAGCATCGCTGCGGGGACGG...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR GCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGCCCACTCCATGGCGATaGAGCGCCCGTCCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQPTPWR*SARPRS
Trigger: GCTGCGGGGACGGGCGCTGCATCGCCATGGAGTGGG...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273857.9
CDS-3UTR GCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCTCTGCAGAGAACACTaGCATGGCCACCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRLCREH*HGHLPG
Trigger: CCCTGGAAGGTGGCCATGGCAGTGTTCTCTGCAGAG...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGCTCTGCAGAGAACACTaGCATGGCCACCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQLCREH*HGHLPG
Trigger: CCCTGGAAGGTGGCCATGGCAGTGTTCTCTGCAGAG...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAGTCATAGTCCACCACTaGTCGACTGTAGCGGGGATG +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSVIVHH*STVAGM
Trigger: CATCCCCGCTACAGTCGAGCAGTGGTGGACTATGAC...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGATCCGTAGTCCAGGCTaGAACGTGTTGGTCGGGATG +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKIRSPG*NVLVGM
Trigger: CATCCCGACCAACACGTTCCAGCCTGGACTACGGAT...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGGAGAGGTGTCAGCGTaGCGTGGTAGGGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTGEVSA*RGRAAS
Trigger: AGATGCTGCCCTACCACGCCACGCTGACACCTCTCC...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCTCCCCTCGAAGCAGTaGGCAACTGTCAGAACCCAC +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRLPSKQ*ATVRTH
Trigger: GTGGGTTCTGACAGTTGCCCACTGCTTCGAGGGGAG...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGTGTCATCGCCATCAATaGTGCACTCAGGGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKCHRHQ*CTQGRR
Trigger: TCGCCTTCCCTGAGTGCATCATTGATGGCGATGACA...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGCAGGGCAGGAGTCCATaGCTGTCATCGCCATCAATG +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQQGRSP*LSSPSM
Trigger: CATTGATGGCGATGACAGTCATGGACTCCTGCCCTG...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGACACCACAGGTCACGTaGCACACACGCATGGTTTGC +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQTPQVT*HTRMVC
Trigger: GCAAACCATGCGTGTGTGTCACGTGACCTGTGGTGT...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAGTAAAGTGGTCCCATTaGGGCTCTCCCAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSVKWSH*GSPSWS
Trigger: ACTCCAACTGGGAGAGCCTCAATGGGACCACTTTAC...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTCATCACTCCCATCCTTaGAGTCCTCGTCACCATCAC +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIHHSHP*SPRHHH
Trigger: GTGATGGTGACGAGGACTGCAAGGATGGGAGTGATG...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTGTTCACACAATGCCCTaGAAGGAGGGATATGCTCGC +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIVHTMP*KEGYAR
Trigger: GCGAGCATATCCCTCCTTGCAGGGCATTGTGTGAAC...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACACTCTGCAGAGAACACTaGCATGGCCACCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTLCREH*HGHLPG
Trigger: CCCTGGAAGGTGGCCATGGCAGTGTTCTCTGCAGAG...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGCACCGCTGTCACCCATaGATGAATCAACTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKHRCHP*MNQLCQ
Trigger: CTGGCACAGTTGATTCATGCATGGGTGACAGCGGTG...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGCAGGCTGGAACGTGTTaGTCGGGATGTGCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKQAGTC*SGCAVD
Trigger: GTCTACTGCACATCCCGACCAACACGTTCCAGCCTG...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGATCCGTAGTCCAGGCTaGAACGTGTTGGTCGGGATG +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRIRSPG*NVLVGM
Trigger: CATCCCGACCAACACGTTCCAGCCTGGACTACGGAT...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCATCGTCACAGTCGGCCTaGCCATCACATCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSSSQSA*PSHLLE
Trigger: TTCCAGAAGATGTGATGGCCAGGCCGACTGTGACGA...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCGCCACTGCTCCGGGTTaGGCAAGCAGACAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFATAPG*ASRQAG
Trigger: TCCGGCCTGTCTGCTTGCCCAACCCGGAGCAGTGGC...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTGGGAGGCACTACGGATaGTTTTCTCCAAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIGRHYG*FSPSSR
Trigger: TCTTGAGCTTGGAGAAAATCATCCGTAGTGCCTCCC...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTCATGTTTCTGACAACTaGGAGGAGAGGTGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIHVSDN*EERCQR
Trigger: ACGCTGACACCTCTCCTCTCAGTTGTCAGAAACATG...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGCATGTTTCTGACAACTaGGAGGAGAGGTGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKHVSDN*EERCQR
Trigger: ACGCTGACACCTCTCCTCTCAGTTGTCAGAAACATG...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACACAGGGCAGGAGTCCATaGCTGTCATCGCCATCAATG +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTQGRSP*LSSPSM
Trigger: CATTGATGGCGATGACAGTCATGGACTCCTGCCCTG...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGCACCATCCCCAGGACTaGTTCACAGCCTTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKHHPQD*FTAFFC
Trigger: GCAAAAGAAGGCTGTGAATCAGTCCTGGGGATGGTG...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAGAGAAGACTCCCAGCTaGTGGATGCTTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSEKTPS*WMLPFE
Trigger: CTCAAAAGGAAGCATCCATCAGCTGGGAGTCTTCTC...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAAGCGGGGATGCAGGATaGTGGTCTTCACAAAGCGTG +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTSGDAG*WSSQSV
Trigger: CACGCTTTGTGAAGACCATCATCCTGCATCCCCGCT...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTTCAGCTCAACGATGCTaGTGTCATAGTCCACCACTG +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAISAQRC*CHSPPL
Trigger: CAGTGGTGGACTATGACATCAGCATCGTTGAGCTGA...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCACGTAGCCAGTCTCACTaGTGTCTTCACTCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSRSQSH*CLHSAQ
Trigger: TTGAGCTGAGTGAAGACATCAGTGAGACTGGCTACG...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGGCTGTCACCCATGCATaGATCAACTGTGCCAGACTC +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQAVTHA*INCARL
Trigger: GAGTCTGGCACAGTTGATTCATGCATGGGTGACAGC...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATTTGGGGACCCGGCTCTaGGGCAGCGCTCTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHLGTRL*GSALPE
Trigger: CTCCGGAAGAGCGCTGCCGCAGAGCCGGGTCCCCAA...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGCATCACTCCCATCCTTaGAGTCCTCGTCACCATCAC +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQHHSHP*SPRHHH
Trigger: GTGATGGTGACGAGGACTGCAAGGATGGGAGTGATG...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACACCACTGGGTTCACTCTaGAGAGAACACTGCCATGGC +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTPLGSL*REHCHG
Trigger: GCCATGGCAGTGTTCTCTGCAGAGTGAACCCAGTGG...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTCACCACTTTCCAAACTaGAGCATTCTCTCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIHHFPN*SILSPL
Trigger: GAGGGGAGAGAGAATGCTGCAGTTTGGAAAGTGGTG...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp CGTGACCACAATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTTCTCAAGACCGGCTTTaGGGACCCGGCTCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: RDHNSVAGFHTLLRFIQTSQDRL*GPGSAA
Trigger: TGCCGCAGAGCCGGGTCCCCAAAGCCGGTCTTGAGA...AGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGTCGTCACAGTCGGCCTaGCCATCACATCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKSSQSA*PSHLLE
Trigger: TTCCAGAAGATGTGATGGCCAGGCCGACTGTGACGA...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGGTAATCAGGGCAGTCTaGGAACCCATCGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQVIRAV*EPIADH
Trigger: GTGATCTGCGATGGGTTCCCAGACTGCCCTGATTAC...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGCGTGACACACACGCATaGTTTGCACATTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKRDTHA*FAHSSS
Trigger: TGAGCTGGAATGTGCAAACCATGCGTGTGTGTCACG...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGCACTTGTATTCCTGTaGCTTTGGTCCCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTALVFL*LWSPGR
Trigger: TCTCCCAGGGGACCAAAGTCACAGGAATACAAGTGC...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR TCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGACACTGGCTGTGGGTaGTGTTCATACAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTDTGCG*CSYRHL
Trigger: CAAGTGCCTGTATGAACATCACCCACAGCCAGTGTC...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR TCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGCATGTTTCTGACAACTaGGAGGAGAGGTGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQHVSDN*EERCQR
Trigger: ACGCTGACACCTCTCCTCTCAGTTGTCAGAAACATG...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACATGTCATCGCCATCAATaGTGCACTCAGGGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTCHRHQ*CTQGRR
Trigger: TCGCCTTCCCTGAGTGCATCATTGATGGCGATGACA...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGTGTGACAGGAGCAGTTaGCCTCGTCAGACTTATCCA +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRCDRSS*PRQTYP
Trigger: TGGATAAGTCTGACGAGGTCAACTGCTCCTGTCACA...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR TCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCATCGTCACCATCACATTaGAACGTGCTGGGGATACAT +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSSSPSH*NVLGIH
Trigger: ATGTATCCCCAGCACGTTTCAATGTGATGGTGACGA...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTGACATGAAGTCTGAATaGCGCTGCAGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIDMKSE*RCSSPH
Trigger: ATGAGGAGAACTGCAGCGTCATTCAGACTTCATGTC...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAGTCTCCTTCTTGACATaGAGTCTGAATGACGCTGCA +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSVSFLT*SLNDAA
Trigger: TGCAGCGTCATTCAGACTTCATGTCAAGAAGGAGAC...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTAGAGCTACCACCACATaGATCAAGGCAGGGATTGTA +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIRATTT*IKAGIV
Trigger: TACAATCCCTGCCTTGATTCATGTGGTGGTAGCTCT...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAGAGCTACCACCACATaGATCAAGGCAGGGATTGTA +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKRATTT*IKAGIV
Trigger: TACAATCCCTGCCTTGATTCATGTGGTGGTAGCTCT...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGGAGCGGCACTTGAAATaGCTAGGTGAGCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQERHLK*LGEHSS
Trigger: GGAAGAATGCTCACCTAGTCATTTCAAGTGCCGCTC...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCAGAACACACTGTCCTaGGCGGCACTTGAAATGACT +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRQNTLS*AALEMT
Trigger: AGTCATTTCAAGTGCCGCTCAGGACAGTGTGTTCTG...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGCCCACTTCTTGGCAATaGGGACACAGCCACAGATAT +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKPTSWQ*GHSHRY
Trigger: ATATCTGTGGCTGTGTCCTCATTGCCAAGAAGTGGG...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGTCAGCTCAACGATGCTaGTGTCATAGTCCACCACTG +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRSAQRC*CHSPPL
Trigger: CAGTGGTGGACTATGACATCAGCATCGTTGAGCTGA...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGCGTAGCCAGTCTCACTaGTGTCTTCACTCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQRSQSH*CLHSAQ
Trigger: TTGAGCTGAGTGAAGACATCAGTGAGACTGGCTACG...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGTCAAGAGAGACAAACTaGACTTTAAGCGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKSRETN*TLSARG
Trigger: GCCCCTGGCGCTTAAAGTTCAGTTTGTCTCTCTTGA...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610355.4
CDS-3UTR TCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGACACTGGCTGTGGGTaGTGTTCATACAGGCACCAA +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTDTGCG*CSYRHQ
Trigger: TTGGTGCCTGTATGAACATCACCCACAGCCAGTGTC...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610355.4
CDS-3UTR GCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTGTTGGTCGGGATGTaGAGTAGACACCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTVLVGM*SRHHSA
Trigger: AGCACTGTGGTGTCTACTGCACATCCCGACCAACAC...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR GCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGTTCACAGCCTTCTTTTaGAGCCTCACAGAAGGACCT +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKFTAFF*SLTEGP
Trigger: AGGTCCTTCTGTGAGGCTGCAAAAGAAGGCTGTGAA...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGTACATTGTCCATTTCTaGATTCCACCAGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKYIVHF*IPPDPG
Trigger: GCCAGGGTCTGGTGGAATGCAGAAATGGACAATGTA...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTTACATTGTCCATTTCTaGATTCCACCAGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIYIVHF*IPPDPG
Trigger: GCCAGGGTCTGGTGGAATGCAGAAATGGACAATGTA...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACACATCACTCCCATCCTTaGAGTCCTCGTCACCATCAC +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTHHSHP*SPRHHH
Trigger: GTGATGGTGACGAGGACTGCAAGGATGGGAGTGATG...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTCCTCTGGAAATTGACTaGAATCTGTGTCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIPLEID*NLCLQA
Trigger: GGCCTGAAGACACAGATTGCAGTCAATTTCCAGAGG...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGCACACACGCATGGTTTaGACATTCCAGCTCATCATC +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKHTRMV*TFQLII
Trigger: GATGATGAGCTGGAATGTGCAAACCATGCGTGTGTG...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCACACACACGCATGGTTTaGACATTCCAGCTCATCATC +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSHTRMV*TFQLII
Trigger: GATGATGAGCTGGAATGTGCAAACCATGCGTGTGTG...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACACTCCTGCCAGCCATCTaGACACACATGGTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTLLPAI*THMVFC
Trigger: ACAGAACACCATGTGTGTGCAGATGGCTGGCAGGAG...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTCAGGCTCTAGCCACTaGTCCGGGTTGGGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCSGSSH*SGLGKQ
Trigger: CTGCTTGCCCAACCCGGAGCAGTGGCTAGAGCCTGA...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCATGCATGAATCAACTGTaGCAGACTCATAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSCMNQL*QTHSQH
Trigger: GTGCTGGCTATGAGTCTGGCACAGTTGATTCATGCA...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGTTCTGTACAGCTCTCTaGAGGCAGCTCTTCACAGTC +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRFCTAL*RQLFTV
Trigger: GACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAA...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTTCTGTACAGCTCTCTaGAGGCAGCTCTTCACAGTC +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQFCTAL*RQLFTV
Trigger: GACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAA...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTGACTTTGGTCCCCTaGGAGAGAAGCATCCGTAGT +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTVTLVP*ERSIRS
Trigger: ACTACGGATGCTTCTCTCCCAGGGGACCAAAGTCAC...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAACACATGGTGTTCTGTaGCAGCTCTGTGAACCATCA +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSTHGVL*QLCEPS
Trigger: TGATGGTTCACAGAGCTGCCACAGAACACCATGTGT...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACACCATCTGCACACACATaGTGTTCTGTGGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTPSAHT*CSVAAL
Trigger: CAGAGCTGCCACAGAACACCATGTGTGTGCAGATGG...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATGCCACTGCTCCGGGTTaGGCAAGCAGACAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHATAPG*ASRQAG
Trigger: TCCGGCCTGTCTGCTTGCCCAACCCGGAGCAGTGGC...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCGCAGTCGCCAGCTTCTaGGAGCAGCCATTGCCCATG +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLAVASF*EQPLPM
Trigger: CATGGGCAATGGCTGCTCTCAGAAGCTGGCGACTGC...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGGGATTTCACCATCAGTaGCCAAAGGTTCACTCCCAT +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRGFHHQ*PKVHSH
Trigger: ATGGGAGTGAACCTTTGGTCACTGATGGTGAAATCC...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR TCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTTTTCCGTTTTCCTGCTaGGGTGAGAAGCAAATTCTG +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIFPFSC*GEKQIL
Trigger: CAGAATTTGCTTCTCACCTCAGCAGGAAAACGGAAA...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTGGCATCAGGCAGGTTTaGTTGTCTGAATTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIGIRQV*LSEFSS
Trigger: AGAGGAAAATTCAGACAATCAAACCTGCCTGATGCC...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGCAAAGCGTGTCTGCATaGACACTGATGGATGGTCTA +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKQSVSA*TLMDGL
Trigger: TAGACCATCCATCAGTGTTCATGCAGACACGCTTTG...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTGAACAAACCCAGCTATaGGGACAGTTCTATAGAGAC +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIEQTQL*GQFYRD
Trigger: GTCTCTATAGAACTGTCCTCATAGCTGGGTTTGTTC...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGTTCACAGCCTTCTTTTaGAGCCTCACAGAAGGACCT +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKFTAFF*SLTEGP
Trigger: AGGTCCTTCTGTGAGGCTGCAAAAGAAGGCTGTGAA...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCTGCAAGGAGGGATATaGTCGCCTGTATTCACATCA +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRLQGGI*SPVFTS
Trigger: TGATGTGAATACAGGCGAGCATATCCCTCCTTGCAG...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGTTCACAAAGCGTGTCTaGATGAACACTGATGGATGG +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKFTKRV*MNTDGW
Trigger: CCATCCATCAGTGTTCATGCAGACACGCTTTGTGAA...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTCGGACCTCTCCCTCTTaGAGCTTAAATGGCATTTTA +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIRTSPS*SLNGIL
Trigger: TAAAATGCCATTTAAGCTGCAAGAGGGAGAGGTCCG...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGACACATGGTGTTCTGTaGCAGCTCTGTGAACCATCA +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRTHGVL*QLCEPS
Trigger: TGATGGTTCACAGAGCTGCCACAGAACACCATGTGT...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCACAGGTAGTATCTATTTaGAATGCTGAGGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSQVVSI*NAEAVQ
Trigger: CTGGACTGCCTCAGCATTCCAAATAGATACTACCTG...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCCAGGGCAGGAGTCCATaGCTGTCATCGCCATCAATG +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFQGRSP*LSSPSM
Trigger: CATTGATGGCGATGACAGTCATGGACTCCTGCCCTG...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGGGCATCAGGCAGGTTTaGTTGTCTGAATTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQGIRQV*LSEFSS
Trigger: AGAGGAAAATTCAGACAATCAAACCTGCCTGATGCC...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCACACCACAGGTCACGTaGCACACACGCATGGTTTGC +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCTPQVT*HTRMVC
Trigger: GCAAACCATGCGTGTGTGTCACGTGACCTGTGGTGT...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CGTGACCACAATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTTGCTTGCAGGCCAGCTaGCTCAATATCTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RDHNSVAGFHTLLRFIQTCLQAS*LNISCQ
Trigger: CTGGCAGGAGATATTGAGTCAGCTGGCCTGCAAGCA...AGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACACAAAGCGTGTCTGCATaGACACTGATGGATGGTCTA +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTQSVSA*TLMDGL
Trigger: TAGACCATCCATCAGTGTTCATGCAGACACGCTTTG...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCAGCGGGGATGCAGGATaGTGGTCTTCACAAAGCGTG +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCSGDAG*WSSQSV
Trigger: CACGCTTTGTGAAGACCATCATCCTGCATCCCCGCT...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTGTGGCCCCAGCCTGTaGTATAGCAGTACGTGTCAG +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCCGPSL*YSSTCQ
Trigger: CTGACACGTACTGCTATATCACAGGCTGGGGCCACA...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAATATCATCCGAGTGGTaGTGGTCTTCATGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSISSEW*WSSCQS
Trigger: ACTTTGACATGAAGACCATCACCACTCGGATGATAT...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGGAGCATTTCTGTCCATaGAAAGTGCTTCTGTACAGC +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQEHFCP*KVLLYS
Trigger: GCTGTACAGAAGCACTTTTCATGGACAGAAATGCTC...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGGAACAAACCCAGCTATaGGGACAGTTCTATAGAGAC +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRREQTQL*GQFYRD
Trigger: GTCTCTATAGAACTGTCCTCATAGCTGGGTTTGTTC...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCTGAGAGCAGCCATTaGCCATGTTATTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQSESSH*PCYCHQ
Trigger: CTGATGACAATAACATGGGCAATGGCTGCTCTCAGA...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCGCAGTTTCCCGGGGATaGAGATTCCACTGGCACACA +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCAVSRG*RFHWHT
Trigger: TGTGTGCCAGTGGAATCTGCATCCCCGGGAAACTGC...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCCCGTCCCCGCAGCGATaGTCTGTTGTGGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLPSPQR*SVVGLQ
Trigger: TTGCAATCCCACAACAGAGCATCGCTGCGGGGACGG...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273857.9
CDS-3UTR GCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTGTTGGTTTGAACAAGTaGAGGGAAAAGAGAAGACTC +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIVGLNK*REKRRL
Trigger: GAGTCTTCTCTTTTCCCTGCACTTGTTCAAACCAAC...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACACACACACGCATGGTTTaGACATTCCAGCTCATCATC +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTHTRMV*TFQLII
Trigger: GATGATGAGCTGGAATGTGCAAACCATGCGTGTGTG...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACACTAAACCCATCTGCTTaGAGGCCAGCTGACTCAATA +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTLNPSA*RPADSI
Trigger: TATTGAGTCAGCTGGCCTGCAAGCAGATGGGTTTAG...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCCCACTGGGTTCACTCTaGAGAGAACACTGCCATGGC +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCPLGSL*REHCHG
Trigger: GCCATGGCAGTGTTCTCTGCAGAGTGAACCCAGTGG...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGTTCACAAAGCGTGTCTaGATGAACACTGATGGATGG +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRFTKRV*MNTDGW
Trigger: CCATCCATCAGTGTTCATGCAGACACGCTTTGTGAA...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCGTCATAGTCCACCACTaGTCGACTGTAGCGGGGATG +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFVIVHH*STVAGM
Trigger: CATCCCCGCTACAGTCGAGCAGTGGTGGACTATGAC...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCTGTCCATGAAAAGTaGTTCTGTACAGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQSVHEK*FCTALC
Trigger: GCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGA...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACGGAGAGGTGTCAGCGTaGCGTGGTAGGGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNGEVSA*RGRAAS
Trigger: AGATGCTGCCCTACCACGCCACGCTGACACCTCTCC...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAGCGATGCTCTGTTGTaGGATTGCAATCACAGTTTT +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKSDALL*DCNHSF
Trigger: AAAACTGTGATTGCAATCCCACAACAGAGCATCGCT...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGCGATGCTCTGTTGTaGGATTGCAATCACAGTTTT +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSSDALL*DCNHSF
Trigger: AAAACTGTGATTGCAATCCCACAACAGAGCATCGCT...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACACACAGATATGTCCACTaGGTTCACTCTGCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTHRYVH*VHSAEN
Trigger: GTTCTCTGCAGAGTGAACCCAGTGGACATATCTGTG...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTGCAGTCGCCAGCTTCTaGGAGCAGCCATTGCCCATG +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTAVASF*EQPLPM
Trigger: CATGGGCAATGGCTGCTCTCAGAAGCTGGCGACTGC...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCGACACTGGCTGTGGGTaGTGTTCATACAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCDTGCG*CSYRHL
Trigger: CAAGTGCCTGTATGAACATCACCCACAGCCAGTGTC...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR TCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCCACCATCCCCAGGACTaGTTCACAGCCTTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCHHPQD*FTAFFC
Trigger: GCAAAAGAAGGCTGTGAATCAGTCCTGGGGATGGTG...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTTTTTCCTCTGGAAATTaGCTGCAATCTGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIFSSGN*LQSVSS
Trigger: TGAAGACACAGATTGCAGTCAATTTCCAGAGGAAAA...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTGCAGGTTTGATTGTCTaGATTTTCCTCTGGAAATTG +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIAGLIV*IFLWKL
Trigger: CAATTTCCAGAGGAAAATTCAGACAATCAAACCTGC...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTCTTGAAATGACTAGGTaGGCATTCTTCCACATATTC +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAILEMTR*AFFHIF
Trigger: GAATATGTGGAAGAATGCTCACCTAGTCATTTCAAG...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGCTTGAAATGACTAGGTaGGCATTCTTCCACATATTC +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKLEMTR*AFFHIF
Trigger: GAATATGTGGAAGAATGCTCACCTAGTCATTTCAAG...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTATCATCTTGGCAAAATaGGCAGTTTTTCTCGTCCAT +
Preference number: 4 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIIILAK*AVFLVH
Trigger: ATGGACGAGAAAAACTGCTCATTTTGCCAAGATGAT...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCGCTGTCACCCATGCATaGATCAACTGTGCCAGACTC +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFAVTHA*INCARL
Trigger: GAGTCTGGCACAGTTGATTCATGCATGGGTGACAGC...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGACTTTCATACAATCGTaGCCACAATTCAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRTFIQS*PQFSCW
Trigger: CCAGCAACTGAATTGTGGTCACGATTGTATGAAAGT...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGGCAGTTTCCCGGGGATaGAGATTCCACTGGCACACA +
Preference number: 4 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQAVSRG*RFHWHT
Trigger: TGTGTGCCAGTGGAATCTGCATCCCCGGGAAACTGC...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGGCTCTGTTGTGGGATTaGAATCACAGTTTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQALLWD*NHSFAH
Trigger: ATGAGCAAAACTGTGATTGCAATCCCACAACAGAGC...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR GCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGGTTGGTTTGAACAAGTaGAGGGAAAAGAGAAGACTC +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRVGLNK*REKRRL
Trigger: GAGTCTTCTCTTTTCCCTGCACTTGTTCAAACCAAC...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCGTTCACACAATGCCCTaGAAGGAGGGATATGCTCGC +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCVHTMP*KEGYAR
Trigger: GCGAGCATATCCCTCCTTGCAGGGCATTGTGTGAAC...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCGTTCACACAATGCCCTaGAAGGAGGGATATGCTCGC +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFVHTMP*KEGYAR
Trigger: GCGAGCATATCCCTCCTTGCAGGGCATTGTGTGAAC...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp CGTGACCACAATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTCTCCTGCCAGCCATCTaGACACACATGGTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: RDHNSVAGFHTLLRFIQTLLPAI*THMVFC
Trigger: ACAGAACACCATGTGTGTGCAGATGGCTGGCAGGAG...AGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGGTCATAGTCCACCACTaGTCGACTGTAGCGGGGATG +
Preference number: 4 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQVIVHH*STVAGM
Trigger: CATCCCCGCTACAGTCGAGCAGTGGTGGACTATGAC...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTTCAGGCTCTAGCCACTaGTCCGGGTTGGGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTSGSSH*SGLGKQ
Trigger: CTGCTTGCCCAACCCGGAGCAGTGGCTAGAGCCTGA...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACACGGACCTCTCCCTCTTaGAGCTTAAATGGCATTTTA +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTRTSPS*SLNGIL
Trigger: TAAAATGCCATTTAAGCTGCAAGAGGGAGAGGTCCG...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGCAGGCTGGAACGTGTTaGTCGGGATGTGCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQQAGTC*SGCAVD
Trigger: GTCTACTGCACATCCCGACCAACACGTTCCAGCCTG...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273857.9
CDS-3UTR CCA 90 bp ATTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAAGGAGAGGTGTCAGCGTaGCGTGGTAGGGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: IILAFNKSNDELLGSAHQGEVSA*RGRAAS
Trigger: AGATGCTGCCCTACCACGCCACGCTGACACCTCTCC...TTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGCACATTGAAACGTGCTaGGGATACATTGTCCATTTC +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKHIETC*GYIVHF
Trigger: GAAATGGACAATGTATCCCCAGCACGTTTCAATGTG...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCGTAATCAGGGCAGTCTaGGAACCCATCGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFVIRAV*EPIADH
Trigger: GTGATCTGCGATGGGTTCCCAGACTGCCCTGATTAC...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGGTTCCTGTATCAATTTaGTCACAGATGGTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKVPVSI*SQMVLL
Trigger: TAGGAGAACCATCTGTGACCAAATTGATACAGGAAC...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATCAGAGAACACTGCCATaGCCACCTTCCAGGGCGACT +
Preference number: 4 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHQRTLP*PPSRAT
Trigger: AGTCGCCCTGGAAGGTGGCCATGGCAGTGTTCTCTG...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGGTAATTGGTTCACATTaGCTACAGTTATTCAGACTG +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKVIGSH*LQLFRL
Trigger: CAGTCTGAATAACTGTAGTCAATGTGAACCAATTAC...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCGAGAAGACTCCCAGCTaGTGGATGCTTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCEKTPS*WMLPFE
Trigger: CTCAAAAGGAAGCATCCATCAGCTGGGAGTCTTCTC...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGTTTTCCTCTGGAAATTaGCTGCAATCTGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKFSSGN*LQSVSS
Trigger: TGAAGACACAGATTGCAGTCAATTTCCAGAGGAAAA...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGGCAGGTTTGATTGTCTaGATTTTCCTCTGGAAATTG +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQAGLIV*IFLWKL
Trigger: CAATTTCCAGAGGAAAATTCAGACAATCAAACCTGC...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGCTTGAAATGACTAGGTaGGCATTCTTCCACATATTC +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKLEMTR*AFFHIF
Trigger: GAATATGTGGAAGAATGCTCACCTAGTCATTTCAAG...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCGAGCGGCACTTGAAATaGCTAGGTGAGCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFERHLK*LGEHSS
Trigger: GGAAGAATGCTCACCTAGTCATTTCAAGTGCCGCTC...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCGAGCGGCACTTGAAATaGCTAGGTGAGCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCERHLK*LGEHSS
Trigger: GGAAGAATGCTCACCTAGTCATTTCAAGTGCCGCTC...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCCAGAACACACTGTCCTaGGCGGCACTTGAAATGACT +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFQNTLS*AALEMT
Trigger: AGTCATTTCAAGTGCCGCTCAGGACAGTGTGTTCTG...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACTGCTTGCAGGCCAGCTaGCTCAATATCTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNCLQAS*LNISCQ
Trigger: CTGGCAGGAGATATTGAGTCAGCTGGCCTGCAAGCA...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCGCTGTCACCCATGCATaGATCAACTGTGCCAGACTC +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLAVTHA*INCARL
Trigger: GAGTCTGGCACAGTTGATTCATGCATGGGTGACAGC...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGCCATTCGACGAAATATaGCACATTACTATAAACGCC +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQPFDEI*HITINA
Trigger: GGCGTTTATAGTAATGTGTCATATTTCGTCGAATGG...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCATCTATTTGGAATGCTaGGGCAGTCCAGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFIYLEC*GSPGCW
Trigger: CCAGCAACCTGGACTGCCTCAGCATTCCAAATAGAT...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGCTCCTGCCAGCCATCTaGACACACATGGTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQLLPAI*THMVFC
Trigger: ACAGAACACCATGTGTGTGCAGATGGCTGGCAGGAG...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGGAGAAATTTTACTTCTaGTCTCACAAGACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQEKFYF*SHKTAH
Trigger: ATGGGCAGTCTTGTGAGAGCAGAAGTAAAATTTCTC...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCCACCACTTTCCAAACTaGAGCATTCTCTCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCHHFPN*SILSPL
Trigger: GAGGGGAGAGAGAATGCTGCAGTTTGGAAAGTGGTG...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCGTGACTTTGGTCCCCTaGGAGAGAAGCATCCGTAGT +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLVTLVP*ERSIRS
Trigger: ACTACGGATGCTTCTCTCCCAGGGGACCAAAGTCAC...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273857.9
CDS-3UTR CCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGTTGCTGCTTTCAGTTTaGTTTCTAAACTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKLLLSV*FLNWEH
Trigger: ATGCTCCCAGTTTAGAAACCAAACTGAAAGCAGCAA...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCCAGCTCATCATCTTaGCAAAATGAGCAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQSSSSS*QNEQFF
Trigger: GAAAAACTGCTCATTTTGCCAAGATGATGAGCTGGA...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGTCCAGCTCATCATCTTaGCAAAATGAGCAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRSSSSS*QNEQFF
Trigger: GAAAAACTGCTCATTTTGCCAAGATGATGAGCTGGA...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCCGTGACACACACGCATaGTTTGCACATTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCRDTHA*FAHSSS
Trigger: TGAGCTGGAATGTGCAAACCATGCGTGTGTGTCACG...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCCCATCTGCACACACATaGTGTTCTGTGGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLPSAHT*CSVAAL
Trigger: CAGAGCTGCCACAGAACACCATGTGTGTGCAGATGG...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGGTTCCTGTATCAATTTaGTCACAGATGGTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQVPVSI*SQMVLL
Trigger: TAGGAGAACCATCTGTGACCAAATTGATACAGGAAC...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTCAGAGAACACTGCCATaGCCACCTTCCAGGGCGACT +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTQRTLP*PPSRAT
Trigger: AGTCGCCCTGGAAGGTGGCCATGGCAGTGTTCTCTG...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGATGAACACTGATGGATaGTCTAGATTGTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRMNTDG*SRLLMP
Trigger: TGGCATCAACAATCTAGACCATCCATCAGTGTTCAT...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCAGTCCAGGTTGCTGGTaGAGGTTAGTAGGGAATCCT +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFSPGCW*RLVGNP
Trigger: AGGATTCCCTACTAACCTCCACCAGCAACCTGGACT...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGGGGAGGCACTACGGATaGTTTTCTCCAAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQGRHYG*FSPSSR
Trigger: TCTTGAGCTTGGAGAAAATCATCCGTAGTGCCTCCC...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACGCACTTGTATTCCTGTaGCTTTGGTCCCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNALVFL*LWSPGR
Trigger: TCTCCCAGGGGACCAAAGTCACAGGAATACAAGTGC...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273857.9
CDS-3UTR TCA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACCACCATCCCCAGGACTaGTTCACAGCCTTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNHHPQD*FTAFFC
Trigger: GCAAAAGAAGGCTGTGAATCAGTCCTGGGGATGGTG...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAAGAAGCAAATTCTGCTaGCATTGCTGCTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTRSKFC*HCCFQF
Trigger: AAACTGAAAGCAGCAATGTCAGCAGAATTTGCTTCT...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCGACATGAAGTCTGAATaGCGCTGCAGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCDMKSE*RCSSPH
Trigger: ATGAGGAGAACTGCAGCGTCATTCAGACTTCATGTC...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCGTCTCCTTCTTGACATaGAGTCTGAATGACGCTGCA +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFVSFLT*SLNDAA
Trigger: TGCAGCGTCATTCAGACTTCATGTCAAGAAGGAGAC...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CGTGACCACAATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTAGAGCTACCACCACATaGATCAAGGCAGGGATTGTA +
Preference number: 4 (lower is better)
Translates to: RDHNSVAGFHTLLRFIQTRATTT*IKAGIV
Trigger: TACAATCCCTGCCTTGATTCATGTGGTGGTAGCTCT...AGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGGTAATTGGTTCACATTaGCTACAGTTATTCAGACTG +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQVIGSH*LQLFRL
Trigger: CAGTCTGAATAACTGTAGTCAATGTGAACCAATTAC...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAATCATCTTGGCAAAATaGGCAGTTTTTCTCGTCCAT +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTIILAK*AVFLVH
Trigger: ATGGACGAGAAAAACTGCTCATTTTGCCAAGATGAT...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACGTAAAGTGGTCCCATTaGGGCTCTCCCAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNVKWSH*GSPSWS
Trigger: ACTCCAACTGGGAGAGCCTCAATGGGACCACTTTAC...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGCCCACTTCTTGGCAATaGGGACACAGCCACAGATAT +
Preference number: 4 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQPTSWQ*GHSHRY
Trigger: ATATCTGTGGCTGTGTCCTCATTGCCAAGAAGTGGG...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCGATGGTCTAGATTGTTaGTGCCAAGCACCACTTTCC +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCDGLDC*CQAPLS
Trigger: GGAAAGTGGTGCTTGGCATCAACAATCTAGACCATC...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CGTGACCACAATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGATGGTCTAGATTGTTaGTGCCAAGCACCACTTTCC +
Preference number: 4 (lower is better)
Translates to: RDHNSVAGFHTLLRFIQTDGLDC*CQAPLS
Trigger: GGAAAGTGGTGCTTGGCATCAACAATCTAGACCATC...AGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCTCAGCTCAACGATGCTaGTGTCATAGTCCACCACTG +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLSAQRC*CHSPPL
Trigger: CAGTGGTGGACTATGACATCAGCATCGTTGAGCTGA...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCCTGCAAGGAGGGATATaGTCGCCTGTATTCACATCA +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFLQGGI*SPVFTS
Trigger: TGATGTGAATACAGGCGAGCATATCCCTCCTTGCAG...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGTCGCAGATCACTGTGTaGTTCAAACATTGTTTATTG +
Preference number: 4 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRSQITV*FKHCLL
Trigger: CAATAAACAATGTTTGAAGCACACAGTGATCTGCGA...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGTCGCAGATCACTGTGTaGTTCAAACATTGTTTATTG +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKSQITV*FKHCLL
Trigger: CAATAAACAATGTTTGAAGCACACAGTGATCTGCGA...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGTTCTGTACAGCTCTCTaGAGGCAGCTCTTCACAGTC +
Preference number: 4 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQFCTAL*RQLFTV
Trigger: GACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAA...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGTATAGATGTAGTTGTTaGAGTCTCAATCAGCCAACT +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKYRCSC*SLNQPT
Trigger: AGTTGGCTGATTGAGACTGCAACAACTACATCTATA...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAAATGTTTTACTCCATaGAAAGTCTTACTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSKCFTP*KVLLCS
Trigger: AGAGCACAGTAAGACTTTGCATGGAGTAAAACATTT...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGGAGTTCCAATGTAATTaGTTCACATTGACTACAGTT +
Preference number: 4 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKEFQCN*FTLTTV
Trigger: AACTGTAGTCAATGTGAACCAATTACATTGGAACTC...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATTCGTCACAGTCGGCCTaGCCATCACATCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHSSQSA*PSHLLE
Trigger: TTCCAGAAGATGTGATGGCCAGGCCGACTGTGACGA...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAACATTGTTTATTGGATaGACATTCCCAAAGATCTCT +
Preference number: 4 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSTLFIG*TFPKIS
Trigger: AGAGATCTTTGGGAATGTCCATCCAATAAACAATGT...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACGTAATCAGGGCAGTCTaGGAACCCATCGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNVIRAV*EPIADH
Trigger: GTGATCTGCGATGGGTTCCCAGACTGCCCTGATTAC...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACATCCAGCTCATCATCTTaGCAAAATGAGCAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTSSSSS*QNEQFF
Trigger: GAAAAACTGCTCATTTTGCCAAGATGATGAGCTGGA...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCCACAGATATGTCCACTaGGTTCACTCTGCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFHRYVH*VHSAEN
Trigger: GTTCTCTGCAGAGTGAACCCAGTGGACATATCTGTG...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCTTTGTGCTGCAGTCATaGTTAGGCCTGGCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFFVLQS*LGLAKG
Trigger: TCCTTTTGCCAGGCCTAACCATGACTGCAGCACAAA...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGATGACTTTGTTGGTATaGATGAACGCAAGAAAACTG +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKMTLLV*MNARKL
Trigger: CAGTTTTCTTGCGTTCATCCATACCAACAAAGTCAT...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTTGAGTTGCGTAAAGTaGCCTAGAGCTAAAAATCAT +
Preference number: 4 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQLSCVK*PRAKNH
Trigger: ATGATTTTTAGCTCTAGGCCACTTTACGCAACTCAA...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp CGTGACCACAATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTTTTCCGTTTTCCTGCTaGGGTGAGAAGCAAATTCTG +
Preference number: 4 (lower is better)
Translates to: RDHNSVAGFHTLLRFIQTFPFSC*GEKQIL
Trigger: CAGAATTTGCTTCTCACCTCAGCAGGAAAACGGAAA...AGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTTCCGTTTTCCTGCTaGGGTGAGAAGCAAATTCTG +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCFPFSC*GEKQIL
Trigger: CAGAATTTGCTTCTCACCTCAGCAGGAAAACGGAAA...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCTCGTCACCATCACATTaGAACGTGCTGGGGATACAT +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLSSPSH*NVLGIH
Trigger: ATGTATCCCCAGCACGTTTCAATGTGATGGTGACGA...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCGGCATCAGGCAGGTTTaGTTGTCTGAATTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCGIRQV*LSEFSS
Trigger: AGAGGAAAATTCAGACAATCAAACCTGCCTGATGCC...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp ATTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAAGTAAAGTGGTCCCATTaGGGCTCTCCCAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: IILAFNKSNDELLGSAHQVKWSH*GSPSWS
Trigger: ACTCCAACTGGGAGAGCCTCAATGGGACCACTTTAC...TTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGGATGGTCTAGATTGTTaGTGCCAAGCACCACTTTCC +
Preference number: 4 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQDGLDC*CQAPLS
Trigger: GGAAAGTGGTGCTTGGCATCAACAATCTAGACCATC...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACCGTAGCCAGTCTCACTaGTGTCTTCACTCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNRSQSH*CLHSAQ
Trigger: TTGAGCTGAGTGAAGACATCAGTGAGACTGGCTACG...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCGAGCATTTCTGTCCATaGAAAGTGCTTCTGTACAGC +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFEHFCP*KVLLYS
Trigger: GCTGTACAGAAGCACTTTTCATGGACAGAAATGCTC...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR GCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCCTGCAAGGAGGGATATaGTCGCCTGTATTCACATCA +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLLQGGI*SPVFTS
Trigger: TGATGTGAATACAGGCGAGCATATCCCTCCTTGCAG...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATCACCACTTTCCAAACTaGAGCATTCTCTCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHHHFPN*SILSPL
Trigger: GAGGGGAGAGAGAATGCTGCAGTTTGGAAAGTGGTG...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGTGCATGAATCAACTGTaGCAGACTCATAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQCMNQL*QTHSQH
Trigger: GTGCTGGCTATGAGTCTGGCACAGTTGATTCATGCA...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp ATTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACACCGCTGTCACCCATaGATGAATCAACTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: IILAFNKSNDELLGSAHQHRCHP*MNQLCQ
Trigger: CTGGCACAGTTGATTCATGCATGGGTGACAGCGGTG...TTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAACAAACATGCAAATTTaGAGTGCACGATTGAGCATT +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTTNMQI*SARLSI
Trigger: AATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGATTCACATCACATTTTaGTACCAAAATGGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKIHITF*YQNGAR
Trigger: TCTTGCACCATTTTGGTACCAAAATGTGATGTGAAT...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGACATTGTTTATTGGATaGACATTCCCAAAGATCTCT +
Preference number: 4 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKTLFIG*TFPKIS
Trigger: AGAGATCTTTGGGAATGTCCATCCAATAAACAATGT...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACATTGAGTTGCGTAAAGTaGCCTAGAGCTAAAAATCAT +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTLSCVK*PRAKNH
Trigger: ATGATTTTTAGCTCTAGGCCACTTTACGCAACTCAA...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACAGTCCAGGTTGCTGGTaGAGGTTAGTAGGGAATCCT +
Preference number: 4 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNSPGCW*RLVGNP
Trigger: AGGATTCCCTACTAACCTCCACCAGCAACCTGGACT...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTTGTGACAGGAGCAGTTaGCCTCGTCAGACTTATCCA +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTCDRSS*PRQTYP
Trigger: TGGATAAGTCTGACGAGGTCAACTGCTCCTGTCACA...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273857.9
CDS-3UTR TCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTGAGAAGACTCCCAGCTaGTGGATGCTTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTEKTPS*WMLPFE
Trigger: CTCAAAAGGAAGCATCCATCAGCTGGGAGTCTTCTC...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTCCCACTTCTTGGCAATaGGGACACAGCCACAGATAT +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTPTSWQ*GHSHRY
Trigger: ATATCTGTGGCTGTGTCCTCATTGCCAAGAAGTGGG...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATCAAAGCGTGTCTGCATaGACACTGATGGATGGTCTA +
Preference number: 4 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHQSVSA*TLMDGL
Trigger: TAGACCATCCATCAGTGTTCATGCAGACACGCTTTG...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCATATCATCCGAGTGGTaGTGGTCTTCATGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFISSEW*WSSCQS
Trigger: ACTTTGACATGAAGACCATCACCACTCGGATGATAT...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTATCTATTTGGAATGCTaGGGCAGTCCAGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTIYLEC*GSPGCW
Trigger: CCAGCAACCTGGACTGCCTCAGCATTCCAAATAGAT...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATCTAAACCCATCTGCTTaGAGGCCAGCTGACTCAATA +
Preference number: 4 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHLNPSA*RPADSI
Trigger: TATTGAGTCAGCTGGCCTGCAAGCAGATGGGTTTAG...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACCTAAACCCATCTGCTTaGAGGCCAGCTGACTCAATA +
Preference number: 4 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNLNPSA*RPADSI
Trigger: TATTGAGTCAGCTGGCCTGCAAGCAGATGGGTTTAG...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCCGGACCTCTCCCTCTTaGAGCTTAAATGGCATTTTA +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLRTSPS*SLNGIL
Trigger: TAAAATGCCATTTAAGCTGCAAGAGGGAGAGGTCCG...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCTCTGTCCATGAAAAGTaGTTCTGTACAGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLSVHEK*FCTALC
Trigger: GCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGA...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCCTAACCTGCACGTTGTaGTCGTGTACCCTAAAATTC +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLLTCTL*SCTLKF
Trigger: GAATTTTAGGGTACACGAGCACAACGTGCAGGTTAG...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCCTTCAGAAATTGAGTTaGGTAAAGTGGCCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCLQKLS*VKWPRA
Trigger: AGCTCTAGGCCACTTTACGCAACTCAATTTCTGAAG...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGAGTTCCAATGTAATTaGTTCACATTGACTACAGTT +
Preference number: 4 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTEFQCN*FTLTTV
Trigger: AACTGTAGTCAATGTGAACCAATTACATTGGAACTC...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCAGAAGCAAATTCTGCTaGCATTGCTGCTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFRSKFC*HCCFQF
Trigger: AAACTGAAAGCAGCAATGTCAGCAGAATTTGCTTCT...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTGACATGAAGTCTGAATaGCGCTGCAGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTDMKSE*RCSSPH
Trigger: ATGAGGAGAACTGCAGCGTCATTCAGACTTCATGTC...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCATATCATCCGAGTGGTaGTGGTCTTCATGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLISSEW*WSSCQS
Trigger: ACTTTGACATGAAGACCATCACCACTCGGATGATAT...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCCCATTCGACGAAATATaGCACATTACTATAAACGCC +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFPFDEI*HITINA
Trigger: GGCGTTTATAGTAATGTGTCATATTTCGTCGAATGG...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCGAGCAGGCTAAAAGTTaGTACATTGAGTATGTAGCT +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFEQAKS*YIEYVA
Trigger: AGCTACATACTCAATGTATCAACTTTTAGCCTGCTC...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACTCTGAGAGCAGCCATTaGCCATGTTATTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNSESSH*PCYCHQ
Trigger: CTGATGACAATAACATGGGCAATGGCTGCTCTCAGA...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGGTTGGTTTGAACAAGTaGAGGGAAAAGAGAAGACTC +
Preference number: 4 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQVGLNK*REKRRL
Trigger: GAGTCTTCTCTTTTCCCTGCACTTGTTCAAACCAAC...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp ATTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACCTCTGGAAATTGACTaGAATCTGTGTCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: IILAFNKSNDELLGSAHQPLEID*NLCLQA
Trigger: GGCCTGAAGACACAGATTGCAGTCAATTTCCAGAGG...TTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTCCTCTGGAAATTGACTaGAATCTGTGTCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTPLEID*NLCLQA
Trigger: GGCCTGAAGACACAGATTGCAGTCAATTTCCAGAGG...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp CGTGACCACAATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAGAAATTTTACTTCTaGTCTCACAAGACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: RDHNSVAGFHTLLRFIQTEKFYF*SHKTAH
Trigger: ATGGGCAGTCTTGTGAGAGCAGAAGTAAAATTTCTC...AGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTTGCATGAATCAACTGTaGCAGACTCATAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTCMNQL*QTHSQH
Trigger: GTGCTGGCTATGAGTCTGGCACAGTTGATTCATGCA...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACTCTGTCCATGAAAAGTaGTTCTGTACAGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNSVHEK*FCTALC
Trigger: GCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGA...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATAACATCGGACCCTTaGATTTCACCATCAGTGACC +
Preference number: 4 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNITSDP*ISPSVT
Trigger: GGTCACTGATGGTGAAATCCAAGGGTCCGATGTTAT...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273857.9
CDS-3UTR CCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGCACATTGAAACGTGCTaGGGATACATTGTCCATTTC +
Preference number: 4 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQHIETC*GYIVHF
Trigger: GAAATGGACAATGTATCCCCAGCACGTTTCAATGTG...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp ATTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAAACACATGGTGTTCTGTaGCAGCTCTGTGAACCATCA +
Preference number: 4 (lower is better)
Translates to: IILAFNKSNDELLGSAHQTHGVL*QLCEPS
Trigger: TGATGGTTCACAGAGCTGCCACAGAACACCATGTGT...TTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp CGTGACCACAATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGTTCCTGTATCAATTTaGTCACAGATGGTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: RDHNSVAGFHTLLRFIQTVPVSI*SQMVLL
Trigger: TAGGAGAACCATCTGTGACCAAATTGATACAGGAAC...AGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTTTTGTGCTGCAGTCATaGTTAGGCCTGGCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTFVLQS*LGLAKG
Trigger: TCCTTTTGCCAGGCCTAACCATGACTGCAGCACAAA...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACCAGGTAGTATCTATTTaGAATGCTGAGGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNQVVSI*NAEAVQ
Trigger: CTGGACTGCCTCAGCATTCCAAATAGATACTACCTG...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCGTAATTGGTTCACATTaGCTACAGTTATTCAGACTG +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCVIGSH*LQLFRL
Trigger: CAGTCTGAATAACTGTAGTCAATGTGAACCAATTAC...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR TCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCTTTTCCTCTGGAAATTaGCTGCAATCTGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLFSSGN*LQSVSS
Trigger: TGAAGACACAGATTGCAGTCAATTTCCAGAGGAAAA...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCATCATCTTGGCAAAATaGGCAGTTTTTCTCGTCCAT +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLIILAK*AVFLVH
Trigger: ATGGACGAGAAAAACTGCTCATTTTGCCAAGATGAT...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACGCTCTGTTGTGGGATTaGAATCACAGTTTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNALLWD*NHSFAH
Trigger: ATGAGCAAAACTGTGATTGCAATCCCACAACAGAGC...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273857.9
CDS-3UTR GCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGGAGAAATTTTACTTCTaGTCTCACAAGACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQEKFYF*SHKTAH
Trigger: ATGGGCAGTCTTGTGAGAGCAGAAGTAAAATTTCTC...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTTTCACAAAGCGTGTCTaGATGAACACTGATGGATGG +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTFTKRV*MNTDGW
Trigger: CCATCCATCAGTGTTCATGCAGACACGCTTTGTGAA...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCACAAACATGCAAATTTaGAGTGCACGATTGAGCATT +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFTNMQI*SARLSI
Trigger: AATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCCAGGAGACTGTTTCATaGATAAAAAGTCTCGCTTAT +
Preference number: 4 (lower is better)
Translates to: NMQICSARLSISVHEKCFQETVS*IKSLAY
Trigger: ATAAGCGAGACTTTTTATCCATGAAACAGTCTCCTG...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATCACATTGAAACGTGCTaGGGATACATTGTCCATTTC +
Preference number: 4 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHHIETC*GYIVHF
Trigger: GAAATGGACAATGTATCCCCAGCACGTTTCAATGTG...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp ATTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAAACTTTCATACAATCGTaGCCACAATTCAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: IILAFNKSNDELLGSAHQTFIQS*PQFSCW
Trigger: CCAGCAACTGAATTGTGGTCACGATTGTATGAAAGT...TTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATGAGCAGGCTAAAAGTTaGTACATTGAGTATGTAGCT +
Preference number: 4 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHEQAKS*YIEYVA
Trigger: AGCTACATACTCAATGTATCAACTTTTAGCCTGCTC...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCTCGCAGATCACTGTGTaGTTCAAACATTGTTTATTG +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLSQITV*FKHCLL
Trigger: CAATAAACAATGTTTGAAGCACACAGTGATCTGCGA...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTCTTCAGAAATTGAGTTaGGTAAAGTGGCCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTLQKLS*VKWPRA
Trigger: AGCTCTAGGCCACTTTACGCAACTCAATTTCTGAAG...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCATTCACATCACATTTTaGTACCAAAATGGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: TNMQICSARLSISVHEKCIHITF*YQNGAR
Trigger: TCTTGCACCATTTTGGTACCAAAATGTGATGTGAAT...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CCA 90 bp CGTGACCACAATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTATTCACATCACATTTTaGTACCAAAATGGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: RDHNSVAGFHTLLRFIQTIHITF*YQNGAR
Trigger: TCTTGCACCATTTTGGTACCAAAATGTGATGTGAAT...AGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATGAACACTGATGGATaGTCTAGATTGTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNMNTDG*SRLLMP
Trigger: TGGCATCAACAATCTAGACCATCCATCAGTGTTCAT...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATATGAACACTGATGGATaGTCTAGATTGTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHMNTDG*SRLLMP
Trigger: TGGCATCAACAATCTAGACCATCCATCAGTGTTCAT...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGGTCTTGCTACCTAAATaGATGACACTGGTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQVLLPK*MTLVFY
Trigger: ATAAAAGACCAGTGTCATCCATTTAGGTAGCAAGAC...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCGTCTTGCTACCTAAATaGATGACACTGGTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLVLLPK*MTLVFY
Trigger: ATAAAAGACCAGTGTCATCCATTTAGGTAGCAAGAC...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGATGACTTTGTTGGTATaGATGAACGCAAGAAAACTG +
Preference number: 4 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQMTLLV*MNARKL
Trigger: CAGTTTTCTTGCGTTCATCCATACCAACAAAGTCAT...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTAGAAGCAAATTCTGCTaGCATTGCTGCTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTRSKFC*HCCFQF
Trigger: AAACTGAAAGCAGCAATGTCAGCAGAATTTGCTTCT...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR TCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTCCATTCGACGAAATATaGCACATTACTATAAACGCC +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTPFDEI*HITINA
Trigger: GGCGTTTATAGTAATGTGTCATATTTCGTCGAATGG...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATCAGGAGACTGTTTCATaGATAAAAAGTCTCGCTTAT +
Preference number: 4 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHQETVS*IKSLAY
Trigger: ATAAGCGAGACTTTTTATCCATGAAACAGTCTCCTG...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTTTGCTGCTTTCAGTTTaGTTTCTAAACTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTLLLSV*FLNWEH
Trigger: ATGCTCCCAGTTTAGAAACCAAACTGAAAGCAGCAA...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR GCA 90 bp ATTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAATATAGATGTAGTTGTTaGAGTCTCAATCAGCCAACT +
Preference number: 4 (lower is better)
Translates to: IILAFNKSNDELLGSAHQYRCSC*SLNQPT
Trigger: AGTTGGCTGATTGAGACTGCAACAACTACATCTATA...TTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
3UTR CAA 72 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTaGCTGGATTTCACACTCTCCTTAGGTTTATACAAA +
Preference number: 4 (lower is better)
Translates to: FLNFHTIVTTIQ*LDFTLSLGLYK
Trigger: TTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CCA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTACATTGTTTATTGGATaGACATTCCCAAAGATCTCT +
Preference number: 4 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTTLFIG*TFPKIS
Trigger: AGAGATCTTTGGGAATGTCCATCCAATAAACAATGT...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS GCA 90 bp ACACAGCCACAGATATGTCCACTGGGTTCACTCTGCAGAGAACACTaGCATGGCCACCTTCCAGGGCGACTCGTCCGACCTCCAAGGATC +
Preference number: 5 (lower is better)
Translates to: TQPQICPLGSLCREH*HGHLPGRLVRPPRI
Trigger: GATCCTTGGAGGTCGGACGAGTCGCCCTGGAAGGTGGCCATGGCAGTGTTCTCTGCAGAGTGAACCCAGTGGACATATCTGTGGCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000515827.1
ENST00000610355.4
CDS CCA 90 bp CCTGTGACTTTGGTCCCCTGGGAGAGAAGCATCCGTAGTCCAGGCTaGAACGTGTTGGTCGGGATGTGCAGTAGACACCACAGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: PVTLVPWERSIRSPG*NVLVGMCSRHHSAL
Trigger: CAGAGCACTGTGGTGTCTACTGCACATCCCGACCAACACGTTCCAGCCTGGACTACGGATGCTTCTCTCCCAGGGGACCAAAGTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000510974.1
CDS-3UTR CAA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTAGCCACTGCTCCGGGTaGGGCAAGCAGACAGGCCGG +
Preference number: 5 (lower is better)
Translates to: KCFCTALCRQLFTVKKAISHCSG*GKQTGR
Trigger: CCGGCCTGTCTGCTTGCCCAACCCGGAGCAGTGGCT...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS GCA 90 bp TTGGCAATGAGGACACAGCCACAGATATGTCCACTGGGTTCACTCTaGAGAGAACACTGCCATGGCCACCTTCCAGGGCGACTCGTCCGA +
Preference number: 5 (lower is better)
Translates to: LAMRTQPQICPLGSL*REHCHGHLPGRLVR
Trigger: TCGGACGAGTCGCCCTGGAAGGTGGCCATGGCAGTGTTCTCTGCAGAGTGAACCCAGTGGACATATCTGTGGCTGTGTCCTCATTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000515827.1
ENST00000610355.4
CDS GCA 90 bp TCACACACCCACTCCATGGCGATGCAGCGCCCGTCCCCGCAGCGATaGTCTGTTGTGGGATTGCAATCTGGAGAAATGAAAACTCACGAG +
Preference number: 5 (lower is better)
Translates to: SHTHSMAMQRPSPQR*SVVGLQSGEMKTHE
Trigger: CTCGTGAGTTTTCATTTCTCCAGATTGCAATCCCACAACAGAGCATCGCTGCGGGGACGGGCGCTGCATCGCCATGGAGTGGGTGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS CCA 90 bp GCCACAGATATGTCCACTGGGTTCACTCTGCAGAGAACACTGCCATaGCCACCTTCCAGGGCGACTCGTCCGACCTCCAAGGATCCTTTT +
Preference number: 5 (lower is better)
Translates to: ATDMSTGFTLQRTLP*PPSRATRPTSKDPF
Trigger: AAAAGGATCCTTGGAGGTCGGACGAGTCGCCCTGGAAGGTGGCCATGGCAGTGTTCTCTGCAGAGTGAACCCAGTGGACATATCTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000515827.1
ENST00000610355.4
CDS GCA 90 bp TCACACACCCACTCCATGGCGATGCAGCGCCCGTCCCCGCAGCGATaGTCTGTTGTGGGATTGCAATCACAGTTTTGCTCATCACTCAAA +
Preference number: 5 (lower is better)
Translates to: SHTHSMAMQRPSPQR*SVVGLQSQFCSSLK
Trigger: TTTGAGTGATGAGCAAAACTGTGATTGCAATCCCACAACAGAGCATCGCTGCGGGGACGGGCGCTGCATCGCCATGGAGTGGGTGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000508498.5
CDS-3UTR CAA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTCCAGGCCCCAGGACTTaGGAAAAGCAGACGGAGCCC +
Preference number: 5 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIPGPRT*EKQTEP
Trigger: GGGCTCCGTCTGCTTTTCCAAAGTCCTGGGGCCTGG...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS CCA 90 bp GGTGATGTTCATACAGGCACTTGTATTCCTGTGACTTTGGTCCCCTaGGAGAGAAGCATCCGTAGTCCAGGCTGGAACGTGTTGGTCGGG +
Preference number: 5 (lower is better)
Translates to: GDVHTGTCIPVTLVP*ERSIRSPGWNVLVG
Trigger: CCCGACCAACACGTTCCAGCCTGGACTACGGATGCTTCTCTCCCAGGGGACCAAAGTCACAGGAATACAAGTGCCTGTATGAACATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
CDS TCA 90 bp AGGACCAGCAATAGGAACCGGAGGAGGTTAGCAGTCGCCAGCTTCTaGGAGCAGCCATTGCCCATGTTATTGTCATCAGCTCTCAAGACC +
Preference number: 5 (lower is better)
Translates to: RTSNRNRRRLAVASF*EQPLPMLLSSALKT
Trigger: GGTCTTGAGAGCTGATGACAATAACATGGGCAATGGCTGCTCTCAGAAGCTGGCGACTGCTAACCTCCTCCGGTTCCTATTGCTGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000610355.4
CDS TCA 90 bp GCATCTGAGGAAATCCGGCCAGGAGTAATTCACCATCCCCAGGACTaGTTCACAGCCTTCTTTTGCAGCCTCACAGAAGGACCTACAGGG +
Preference number: 5 (lower is better)
Translates to: ASEEIRPGVIHHPQD*FTAFFCSLTEGPTG
Trigger: CCCTGTAGGTCCTTCTGTGAGGCTGCAAAAGAAGGCTGTGAATCAGTCCTGGGGATGGTGAATTACTCCTGGCCGGATTTCCTCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS TCA 90 bp AGGACCAGCAATAGGAACCGGAGGAGGTTAGCAGTCGCCAGCTTCTaGGAGCAGCCATTGCCCATGTTATTGTCATCAGCTCTCAAGACG +
Preference number: 5 (lower is better)
Translates to: RTSNRNRRRLAVASF*EQPLPMLLSSALKT
Trigger: CGTCTTGAGAGCTGATGACAATAACATGGGCAATGGCTGCTCTCAGAAGCTGGCGACTGCTAACCTCCTCCGGTTCCTATTGCTGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510974.1
CDS-3UTR CAA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGCCAGGCTGGAACGTGTaGGTCGGGATGTGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKPGWNV*VGMCSR
Trigger: TCTACTGCACATCCCGACCAACACGTTCCAGCCTGG...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS TCA 90 bp CGTCCCCGCAGCGATGCTCTGTTGTGGGATTGCAATCTGGAGAAATaGAAACTCACGAGGATGCAGAGAACCAGCATGACTAACAGGCAG +
Preference number: 5 (lower is better)
Translates to: RPRSDALLWDCNLEK*KLTRMQRTSMTNRQ
Trigger: CTGCCTGTTAGTCATGCTGGTTCTCTGCATCCTCGTGAGTTTTCATTTCTCCAGATTGCAATCCCACAACAGAGCATCGCTGCGGGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS GCA 90 bp CATCTGCTTGCAGGCCAGCTGACTCAATATCTCCTGCCAGCCATCTaGACACACATGGTGTTCTGTGGCAGCTCTGTGAACCATCAGAAA +
Preference number: 5 (lower is better)
Translates to: HLLAGQLTQYLLPAI*THMVFCGSSVNHQK
Trigger: TTTCTGATGGTTCACAGAGCTGCCACAGAACACCATGTGTGTGCAGATGGCTGGCAGGAGATATTGAGTCAGCTGGCCTGCAAGCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS GCA 90 bp GATGTCTTCACTCAGCTCAACGATGCTGATGTCATAGTCCACCACTaGTCGACTGTAGCGGGGATGCAGGATGATGGTCTTCACAAAGCG +
Preference number: 5 (lower is better)
Translates to: DVFTQLNDADVIVHH*STVAGMQDDGLHKA
Trigger: CGCTTTGTGAAGACCATCATCCTGCATCCCCGCTACAGTCGAGCAGTGGTGGACTATGACATCAGCATCGTTGAGCTGAGTGAAGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp CGTGACCACAATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTCTCTCAAGACCGGCTTaGGGGACCCGGCTCTGCGGC +
Preference number: 5 (lower is better)
Translates to: RDHNSVAGFHTLLRFIQTLSRPA*GTRLCG
Trigger: GCCGCAGAGCCGGGTCCCCAAAGCCGGTCTTGAGAG...AGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGCCTCCAAGGATCCTTTaGTTCATTCGGGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKPPRIL*FIRAAG
Trigger: CCCTGCTGCCCGAATGAACAAAAGGATCCTTGGAGG...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp CGTGACCACAATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTAGCCACTGCTCCGGGTaGGGCAAGCAGACAGGCCGG +
Preference number: 5 (lower is better)
Translates to: RDHNSVAGFHTLLRFIQTSHCSG*GKQTGR
Trigger: CCGGCCTGTCTGCTTGCCCAACCCGGAGCAGTGGCT...AGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS TCA 90 bp TTGGTCACAGATGGTTCTCCTAAACCCATCTGCTTGCAGGCCAGCTaGCTCAATATCTCCTGCCAGCCATCTGCACACACATGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: LVTDGSPKPICLQAS*LNISCQPSAHTWCS
Trigger: AGAACACCATGTGTGTGCAGATGGCTGGCAGGAGATATTGAGTCAGCTGGCCTGCAAGCAGATGGGTTTAGGAGAACCATCTGTGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS GCA 90 bp AGTCGTCACAGTCGTTGTAGCCATTACATTGCAGTTTCCCGGGGATaGAGATTCCACTGGCACACAGAAAGTTCTCACCCCTTCCACAGA +
Preference number: 5 (lower is better)
Translates to: SRHSRCSHYIAVSRG*RFHWHTESSHPFHR
Trigger: TCTGTGGAAGGGGTGAGAACTTTCTGTGTGCCAGTGGAATCTGCATCCCCGGGAAACTGCAATGTAATGGCTACAACGACTGTGACGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTTGTATTCCTGTGACTTaGGTCCCCTGGGAGAGAAGC +
Preference number: 5 (lower is better)
Translates to: KCFCTALCRQLFTVKKAICIPVT*VPWERS
Trigger: GCTTCTCTCCCAGGGGACCAAAGTCACAGGAATACA...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CAA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGCGCAGCGATGCTCTGTaGTGGGATTGCAATCACAGT +
Preference number: 5 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKRSDAL*WDCNHS
Trigger: ACTGTGATTGCAATCCCACAACAGAGCATCGCTGCG...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CAA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTTCATCACTCCCATCCTaGCAGTCCTCGTCACCATCA +
Preference number: 5 (lower is better)
Translates to: KCFCTALCRQLFTVKKAISSLPS*QSSSPS
Trigger: TGATGGTGACGAGGACTGCAAGGATGGGAGTGATGA...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGTGTAAAGTGGTCCCATaGAGGCTCTCCCAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKCKVVP*RLSQLE
Trigger: CTCCAACTGGGAGAGCCTCAATGGGACCACTTTACA...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS TCA 90 bp CACAAGACTGCCCATTTACTAGAAGTTCATGTAAAGTGGTCCCATTaGGGCTCTCCCAGTTGGAGTGTAATGTCAGCCACCGCGGCTCTT +
Preference number: 5 (lower is better)
Translates to: HKTAHLLEVHVKWSH*GSPSWSVMSATAAL
Trigger: AAGAGCCGCGGTGGCTGACATTACACTCCAACTGGGAGAGCCTCAATGGGACCACTTTACATGAACTTCTAGTAAATGGGCAGTCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000515827.1
ENST00000610355.4
CDS GCA 90 bp CGTCACCATCACATTGAAACGTGCTGGGGATACATTGTCCATTTCTaGATTCCACCAGACCCTGGCTGTGACAGGCACAGTTTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: RHHHIETCWGYIVHF*IPPDPGCDRHSFAH
Trigger: ATGAGCAAAACTGTGCCTGTCACAGCCAGGGTCTGGTGGAATGCAGAAATGGACAATGTATCCCCAGCACGTTTCAATGTGATGGTGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000610355.4
CDS CCA 90 bp CTCTGCGGCAGCGCTCTTCCGGAGCGAGGGCAGGAGACTGTTTCATaGATAAAAAGTCTCGCTTATTCTTCTGTCCACTTTTATCTTGGT +
Preference number: 5 (lower is better)
Translates to: LCGSALPERGQETVS*IKSLAYSSVHFYLG
Trigger: ACCAAGATAAAAGTGGACAGAAGAATAAGCGAGACTTTTTATCCATGAAACAGTCTCCTGCCCTCGCTCCGGAAGAGCGCTGCCGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000610355.4
CDS CCA 90 bp CGTTGTAGCCATTACATTGCAGTTTCCCGGGGATGCAGATTCCACTaGCACACAGAAAGTTCTCACCCCTTCCACAGAGCAATTGCTTTC +
Preference number: 5 (lower is better)
Translates to: RCSHYIAVSRGCRFH*HTESSHPFHRAIAF
Trigger: GAAAGCAATTGCTCTGTGGAAGGGGTGAGAACTTTCTGTGTGCCAGTGGAATCTGCATCCCCGGGAAACTGCAATGTAATGGCTACAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CCA 90 bp CAGTCGGCTTCACCATCACACCACAGGTCACGTGACACACACGCATaGTTTGCACATTCCAGCTCATCATCTTGGCAAAATGAGCAGTTT +
Preference number: 5 (lower is better)
Translates to: QSASPSHHRSRDTHA*FAHSSSSSWQNEQF
Trigger: AAACTGCTCATTTTGCCAAGATGATGAGCTGGAATGTGCAAACCATGCGTGTGTGTCACGTGACCTGTGGTGTGATGGTGAAGCCGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000504584.1
ENST00000505754.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGCCTTCCACAGAGCAATaGCTTTCCGTTTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKPSTEQ*LSVFLL
Trigger: CAGCAGGAAAACGGAAAGCAATTGCTCTGTGGAAGG...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTGTTGTAGCCATTACATaGCAGTTTCCCGGGGATGCA +
Preference number: 5 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIVVAIT*QFPGDA
Trigger: TGCATCCCCGGGAAACTGCAATGTAATGGCTACAAC...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTCGTGCTGGGGATACATaGTCCATTTCTGCATTCCAC +
Preference number: 5 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIRAGDT*SISAFH
Trigger: GTGGAATGCAGAAATGGACAATGTATCCCCAGCACG...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGTGTAAAGTGGTCCCATaGAGGCTCTCCCAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKCKVVP*RLSQLE
Trigger: CTCCAACTGGGAGAGCCTCAATGGGACCACTTTACA...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCGGCGCCCACAGTCTaGTTTAGTACACAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKAAPTV*FSTQKR
Trigger: TCTCTTCTGTGTACTAAACAAGACTGTGGGCGCCGC...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGGTCAGAACCCACTTCTaGGCAATGAGGACACAGCCA +
Preference number: 5 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQVRTHF*AMRTQP
Trigger: TGGCTGTGTCCTCATTGCCAAGAAGTGGGTTCTGAC...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGTCAGAACCCACTTCTaGGCAATGAGGACACAGCCA +
Preference number: 5 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKVRTHF*AMRTQP
Trigger: TGGCTGTGTCCTCATTGCCAAGAAGTGGGTTCTGAC...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACAGCCACTGCTCCGGGTaGGGCAAGCAGACAGGCCGG +
Preference number: 5 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNSHCSG*GKQTGR
Trigger: CCGGCCTGTCTGCTTGCCCAACCCGGAGCAGTGGCT...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCCCAGGCCCCAGGACTTaGGAAAAGCAGACGGAGCCC +
Preference number: 5 (lower is better)
Translates to: TNMQICSARLSISVHEKCPGPRT*EKQTEP
Trigger: GGGCTCCGTCTGCTTTTCCAAAGTCCTGGGGCCTGG...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAGTGACAGGCACAGTTTaGCTCATCACTCAAATCCCC +
Preference number: 5 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSVTGTV*LITQIP
Trigger: GGGGATTTGAGTGATGAGCAAAACTGTGCCTGTCAC...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610355.4
CDS TCA 90 bp GCAATCTGGAGAAATGAAAACTCACGAGGATGCAGAGAACCAGCATaGCTAACAGGCAGGATTCTATGGCTCCCAGTTCCCATCGAAGAG +
Preference number: 5 (lower is better)
Translates to: AIWRNENSRGCREPA*LTGRILWLPVPIEE
Trigger: CTCTTCGATGGGAACTGGGAGCCATAGAATCCTGCCTGTTAGTCATGCTGGTTCTCTGCATCCTCGTGAGTTTTCATTTCTCCAGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS TCA 90 bp GCAACGAGAGAGAAAACAGACACCCACTTGGCTAGATCAGCCAAATaGAGCTTGGAGTTTTGCAGGGAGAGGTGTGGAAGTCAGATACAC +
Preference number: 5 (lower is better)
Translates to: ATREKTDTHLARSAK*SLEFCRERCGSQIH
Trigger: GTGTATCTGACTTCCACACCTCTCCCTGCAAAACTCCAAGCTTCATTTGGCTGATCTAGCCAAGTGGGTGTCTGTTTTCTCTCTCGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS GCA 90 bp CACCCCAGCCTCCAAGTAGTTGGGACTACAAGGAATATGCCAGCATaGCTGGCCTTATATCCAAAAGAACTGCTAGGTAAGCCATGCAAA +
Preference number: 5 (lower is better)
Translates to: HPSLQVVGTTRNMPA*LALYPKELLGKPCK
Trigger: TTTGCATGGCTTACCTAGCAGTTCTTTTGGATATAAGGCCAGGCATGCTGGCATATTCCTTGTAGTCCCAACTACTTGGAGGCTGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS-3UTR CAA 90 bp ATTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACTCTCAAGACCGGCTTaGGGGACCCGGCTCTGCGGC +
Preference number: 5 (lower is better)
Translates to: IILAFNKSNDELLGSAHQLSRPA*GTRLCG
Trigger: GCCGCAGAGCCGGGTCCCCAAAGCCGGTCTTGAGAG...TTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACATGTATTCCTGTGACTTaGGTCCCCTGGGAGAGAAGC +
Preference number: 5 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTCIPVT*VPWERS
Trigger: GCTTCTCTCCCAGGGGACCAAAGTCACAGGAATACA...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CAA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCTTCCACAGAGCAATaGCTTTCCGTTTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRPSTEQ*LSVFLL
Trigger: CAGCAGGAAAACGGAAAGCAATTGCTCTGTGGAAGG...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCTCGTCACCATCACATaGAAACGTGCTGGGGATACA +
Preference number: 5 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRLVTIT*KRAGDT
Trigger: TGTATCCCCAGCACGTTTCAATGTGATGGTGACGAG...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACATTGAGGCTCTCCCAGTaGGAGTGTAATGTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTLRLSQ*ECNVSH
Trigger: GTGGCTGACATTACACTCCAACTGGGAGAGCCTCAA...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGGGATGGTCTAGATTGTaGATGCCAAGCACCACTTTC +
Preference number: 5 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKGWSRL*MPSTTF
Trigger: GAAAGTGGTGCTTGGCATCAACAATCTAGACCATCC...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAGGATGGTCTAGATTGTaGATGCCAAGCACCACTTTC +
Preference number: 5 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSGWSRL*MPSTTF
Trigger: GAAAGTGGTGCTTGGCATCAACAATCTAGACCATCC...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS TCA 90 bp GTTATTCAGACTGTTGTTCGGGTCACAGAGAGAGCTACCACCACATaGATCAAGGCAGGGATTGTAGAGGCATCTTTGGTCTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: VIQTVVRVTERATTT*IKAGIVEASLVSFL
Trigger: CAAGAAGGAGACCAAAGATGCCTCTACAATCCCTGCCTTGATTCATGTGGTGGTAGCTCTCTCTGTGACCCGAACAACAGTCTGAATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS GCA 90 bp GAGAGAAGCATCCGTAGTCCAGGCTGGAACGTGTTGGTCGGGATGTaGAGTAGACACCACAGTGCTCTGGTTATAAATTGTATTTGTAAG +
Preference number: 5 (lower is better)
Translates to: ERSIRSPGWNVLVGM*SRHHSALVINCICK
Trigger: CTTACAAATACAATTTATAACCAGAGCACTGTGGTGTCTACTGCACATCCCGACCAACACGTTCCAGCCTGGACTACGGATGCTTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000510974.1
CDS CCA 90 bp GACTCAATATCTCCTGCCAGCCATCTGCACACACATGGTGTTCTGTaGCAGCTCTGTGAACCATCAGAAAGGAAGAGGAGTTCACATTTA +
Preference number: 5 (lower is better)
Translates to: DSISPASHLHTHGVL*QLCEPSERKRSSHL
Trigger: TAAATGTGAACTCCTCTTCCTTTCTGATGGTTCACAGAGCTGCCACAGAACACCATGTGTGTGCAGATGGCTGGCAGGAGATATTGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CCA 90 bp TCCATTCAGCTTCAGTGGCTGACAGGCATGAGAGAGTACAACAGATaGCAGAAACAAGTAGCTCACCACAGTCCCATTCATCTGAACTGT +
Preference number: 5 (lower is better)
Translates to: SIQLQWLTGMREYNR*QKQVAHHSPIHLNC
Trigger: ACAGTTCAGATGAATGGGACTGTGGTGAGCTACTTGTTTCTGCCATCTGTTGTACTCTCTCATGCCTGTCAGCCACTGAAGCTGAATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504584.1
ENST00000505754.1
CDS-3UTR CAA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCACTGTCCACTTTTATCTaGGTCGCTTTTCTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSLSTFI*VAFLSS
Trigger: AGAGGAGAGAAAAGCGACCAAGATAAAAGTGGACAG...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACACTCGTCACCATCACATaGAAACGTGCTGGGGATACA +
Preference number: 5 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTLVTIT*KRAGDT
Trigger: TGTATCCCCAGCACGTTTCAATGTGATGGTGACGAG...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAGATGGATGCTTCCTTTaGAGTCCTGTGGCCAAAATA +
Preference number: 5 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSDGCFL*SPVAKI
Trigger: TATTTTGGCCACAGGACTCAAAAGGAAGCATCCATC...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGACACACACGCATGGTTaGCACATTCCAGCTCATCAT +
Preference number: 5 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQTHTHG*HIPAHH
Trigger: ATGATGAGCTGGAATGTGCAAACCATGCGTGTGTGT...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGACACACACGCATGGTTaGCACATTCCAGCTCATCAT +
Preference number: 5 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKTHTHG*HIPAHH
Trigger: ATGATGAGCTGGAATGTGCAAACCATGCGTGTGTGT...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGGATGGTCTAGATTGTaGATGCCAAGCACCACTTTC +
Preference number: 5 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKGWSRL*MPSTTF
Trigger: GAAAGTGGTGCTTGGCATCAACAATCTAGACCATCC...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGGATGGATGGTCTAGATaGTTGATGCCAAGCACCACT +
Preference number: 5 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQDGWSR*LMPSTT
Trigger: AGTGGTGCTTGGCATCAACAATCTAGACCATCCATC...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACCCAGGCCCCAGGACTTaGGAAAAGCAGACGGAGCCC +
Preference number: 5 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNPGPRT*EKQTEP
Trigger: GGGCTCCGTCTGCTTTTCCAAAGTCCTGGGGCCTGG...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGGTGACCACAATTCAGTaGCTGGATTTCACACTCTCC +
Preference number: 5 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRVTTIQ*LDFTLS
Trigger: GGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCAC...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS GCA 90 bp GCATCAGGCAGGTTTGATTGTCTGAATTTTCCTCTGGAAATTGACTaGAATCTGTGTCTTCAGGCCACTGTAGGCCCACAATCCCAAGAA +
Preference number: 5 (lower is better)
Translates to: ASGRFDCLNFPLEID*NLCLQATVGPQSQE
Trigger: TTCTTGGGATTGTGGGCCTACAGTGGCCTGAAGACACAGATTGCAGTCAATTTCCAGAGGAAAATTCAGACAATCAAACCTGCCTGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000503821.5
ENST00000504584.1
ENST00000505754.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CCA 90 bp AGGATGATGGTCTTCACAAAGCGTGTCTGCATGAACACTGATGGATaGTCTAGATTGTTGATGCCAAGCACCACTTTCCAAACTGCAGCA +
Preference number: 5 (lower is better)
Translates to: RMMVFTKRVCMNTDG*SRLLMPSTTFQTAA
Trigger: TGCTGCAGTTTGGAAAGTGGTGCTTGGCATCAACAATCTAGACCATCCATCAGTGTTCATGCAGACACGCTTTGTGAAGACCATCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGCTGTCCACTTTTATCTaGGTCGCTTTTCTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQLSTFI*VAFLSS
Trigger: AGAGGAGAGAAAAGCGACCAAGATAAAAGTGGACAG...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGAATAACATCGGACCCTaGGATTTCACCATCAGTGAC +
Preference number: 5 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKNNIGP*DFTISD
Trigger: GTCACTGATGGTGAAATCCAAGGGTCCGATGTTATT...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CAA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCCCAGGCTGGAACGTGTaGGTCGGGATGTGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLPGWNV*VGMCSR
Trigger: TCTACTGCACATCCCGACCAACACGTTCCAGCCTGG...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273857.9
CDS-3UTR CAA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAATTGCTGCTTTCAGTTaGGTTTCTAAACTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSIAAFS*VSKLGA
Trigger: TGCTCCCAGTTTAGAAACCAAACTGAAAGCAGCAAT...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGGATGGATGCTTCCTTTaGAGTCCTGTGGCCAAAATA +
Preference number: 5 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQDGCFL*SPVAKI
Trigger: TATTTTGGCCACAGGACTCAAAAGGAAGCATCCATC...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTTGTTCCTGTATCAATTaGGTCACAGATGGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: KCFCTALCRQLFTVKKAICSCIN*VTDGSP
Trigger: AGGAGAACCATCTGTGACCAAATTGATACAGGAACA...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGTGTTCCTGTATCAATTaGGTCACAGATGGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKCSCIN*VTDGSP
Trigger: AGGAGAACCATCTGTGACCAAATTGATACAGGAACA...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCCCTCCAAGGATCCTTTaGTTCATTCGGGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: TNMQICSARLSISVHEKCPPRIL*FIRAAG
Trigger: CCCTGCTGCCCGAATGAACAAAAGGATCCTTGGAGG...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGATGGATGGTCTAGATaGTTGATGCCAAGCACCACT +
Preference number: 5 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTDGWSR*LMPSTT
Trigger: AGTGGTGCTTGGCATCAACAATCTAGACCATCCATC...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCATTCACTGAGCCTAAGTaGAGCAGGCTAAAAGTTGAT +
Preference number: 5 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSFTEPK*SRLKVD
Trigger: ATCAACTTTTAGCCTGCTCAACTTAGGCTCAGTGAA...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGAAACAGCATGATATGTaGATAGCAACTGAGGCGATG +
Preference number: 5 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKKQHDM*IATEAM
Trigger: CATCGCCTCAGTTGCTATCAACATATCATGCTGTTT...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGATTGCTGCTTTCAGTTaGGTTTCTAAACTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQIAAFS*VSKLGA
Trigger: TGCTCCCAGTTTAGAAACCAAACTGAAAGCAGCAAT...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGATTGCAATCACAGTTTaGCTCATCACTCAAATCCCC +
Preference number: 5 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQIAITV*LITQIP
Trigger: GGGGATTTGAGTGATGAGCAAAACTGTGATTGCAAT...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CAA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACATGCTCTGTTGTGGGATaGCAATCACAGTTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTCSVVG*QSQFCS
Trigger: TGAGCAAAACTGTGATTGCAATCCCACAACAGAGCA...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CAA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTCATCACTCCCATCCTaGCAGTCCTCGTCACCATCA +
Preference number: 5 (lower is better)
Translates to: TNMQICSARLSISVHEKCSSLPS*QSSSPS
Trigger: TGATGGTGACGAGGACTGCAAGGATGGGAGTGATGA...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp AAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCCATTATTTTCCTCTGGAAATaGACTGCAATCTGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: KCFCTALCRQLFTVKKAIIFLWK*TAICVF
Trigger: GAAGACACAGATTGCAGTCAATTTCCAGAGGAAAAT...AATGGCCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGATTTTCCTCTGGAAATaGACTGCAATCTGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKIFLWK*TAICVF
Trigger: GAAGACACAGATTGCAGTCAATTTCCAGAGGAAAAT...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTGAGGCTCTCCCAGTaGGAGTGTAATGTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: TNMQICSARLSISVHEKCLRLSQ*ECNVSH
Trigger: GTGGCTGACATTACACTCCAACTGGGAGAGCCTCAA...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCCCTCCAAGGATCCTTTaGTTCATTCGGGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLPPRIL*FIRAAG
Trigger: CCCTGCTGCCCGAATGAACAAAAGGATCCTTGGAGG...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCGTCAGAACCCACTTCTaGGCAATGAGGACACAGCCA +
Preference number: 5 (lower is better)
Translates to: TNMQICSARLSISVHEKCVRTHF*AMRTQP
Trigger: TGGCTGTGTCCTCATTGCCAAGAAGTGGGTTCTGAC...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp CTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAATGCTCTTTATGACTTaGTTGGTATGGATGAACGCA +
Preference number: 5 (lower is better)
Translates to: LSMKSASVQLSAGSSSQSMLFMT*LVWMNA
Trigger: TGCGTTCATCCATACCAACAAAGTCATAAAGAGCAT...TGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGTTCACTGAGCCTAAGTaGAGCAGGCTAAAAGTTGAT +
Preference number: 5 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKFTEPK*SRLKVD
Trigger: ATCAACTTTTAGCCTGCTCAACTTAGGCTCAGTGAA...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS TCA 90 bp AATCAACTGTGCCAGACTCATAGCCAGCACATATCATCCGAGTGGTaGTGGTCTTCATGTCAAAGTAGGACTGACAATGTTCCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: NQLCQTHSQHISSEW*WSSCQSRTDNVPEK
Trigger: TTTCTCTGGAACATTGTCAGTCCTACTTTGACATGAAGACCATCACCACTCGGATGATATGTGCTGGCTATGAGTCTGGCACAGTTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS TCA 90 bp TTTGCAGAAGAAAGGTTCCCCATTCTGTGGGCAGAGCATCACCTTTaGCAAAGTCACAGAAGCATAAAAGAGACATATGGAGCAACGAGA +
Preference number: 5 (lower is better)
Translates to: FAEERFPILWAEHHL*QSHRSIKETYGATR
Trigger: TCTCGTTGCTCCATATGTCTCTTTTATGCTTCTGTGACTTTGTCAAAGGTGATGCTCTGCCCACAGAATGGGGAACCTTTCTTCTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS-3UTR CAA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACATGTTCATACAGGCACTaGTATTCCTGTGACTTTGGT +
Preference number: 5 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTCSYRH*YSCDFG
Trigger: ACCAAAGTCACAGGAATACAAGTGCCTGTATGAACA...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CAA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAATTGCTGCTTTCAGTTaGGTTTCTAAACTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTIAAFS*VSKLGA
Trigger: TGCTCCCAGTTTAGAAACCAAACTGAAAGCAGCAAT...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp ATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGGCAAATTCTGCTGACATaGCTGCTTTCAGTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: MKSASVQLSAGSSSQSRRQILLT*LLSVWF
Trigger: AAACCAAACTGAAAGCAGCAATGTCAGCAGAATTTG...CCTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp CGTGACCACAATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTCTCGTCACCATCACATaGAAACGTGCTGGGGATACA +
Preference number: 5 (lower is better)
Translates to: RDHNSVAGFHTLLRFIQTLVTIT*KRAGDT
Trigger: TGTATCCCCAGCACGTTTCAATGTGATGGTGACGAG...AGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGTATTCACATCACATTTaGGTACCAAAATGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKYSHHI*VPKWCK
Trigger: CTTGCACCATTTTGGTACCAAAATGTGATGTGAATA...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCGCGGCGCCCACAGTCTaGTTTAGTACACAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLAAPTV*FSTQKR
Trigger: TCTCTTCTGTGTACTAAACAAGACTGTGGGCGCCGC...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp GTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGTGCATTCAATATGTCTaGCTACCTAAATGGATGACA +
Preference number: 5 (lower is better)
Translates to: VHEKCFCTALCRQLFTVKCIQYV*LPKWMT
Trigger: TGTCATCCATTTAGGTAGCAAGACATATTGAATGCA...CTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS CCA 90 bp GCTCTCACAAAGGGCAGAATCCATAGGATGCTTTGCCATGAGAGGTaGTATACCCTGAATATAAGCAGTGTTTTAGAAGATGTATGTGGA +
Preference number: 5 (lower is better)
Translates to: ALTKGRIHRMLCHER*YTLNISSVLEDVCG
Trigger: TCCACATACATCTTCTAAAACACTGCTTATATTCAGGGTATACCACCTCTCATGGCAAAGCATCCTATGGATTCTGCCCTTTGTGAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS CCA 90 bp CTGGGAACCCATCGCAGATCACTGTGTGCTTCAAACATTGTTTATTaGATGGACATTCCCAAAGATCTCTCTCTTTACAACCTTCCACAT +
Preference number: 5 (lower is better)
Translates to: LGTHRRSLCASNIVY*MDIPKDLSLYNLPH
Trigger: ATGTGGAAGGTTGTAAAGAGAGAGATCTTTGGGAATGTCCATCCAATAAACAATGTTTGAAGCACACAGTGATCTGCGATGGGTTCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505754.1
CDS-3UTR CAA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACACAAATTCTGCTGACATaGCTGCTTTCAGTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTQILLT*LLSVWF
Trigger: AAACCAAACTGAAAGCAGCAATGTCAGCAGAATTTG...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGGTTGTAGCCATTACATaGCAGTTTCCCGGGGATGCA +
Preference number: 5 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQVVAIT*QFPGDA
Trigger: TGCATCCCCGGGAAACTGCAATGTAATGGCTACAAC...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACCGCAGCGATGCTCTGTaGTGGGATTGCAATCACAGT +
Preference number: 5 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNRSDAL*WDCNHS
Trigger: ACTGTGATTGCAATCCCACAACAGAGCATCGCTGCG...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273857.9
CDS-3UTR CAA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCCGTGCTGGGGATACATaGTCCATTTCTGCATTCCAC +
Preference number: 5 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLRAGDT*SISAFH
Trigger: GTGGAATGCAGAAATGGACAATGTATCCCCAGCACG...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACTCATCACTCCCATCCTaGCAGTCCTCGTCACCATCA +
Preference number: 5 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNSSLPS*QSSSPS
Trigger: TGATGGTGACGAGGACTGCAAGGATGGGAGTGATGA...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp CATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTCAAGAAGTTTATAACAGTTGGTTaGAACAAGTGCAGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: HEKCFCTALCRQLFTVKKFITVG*NKCREK
Trigger: CTTTTCCCTGCACTTGTTCAAACCAACTGTTATAAA...CTTCTTGACTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTGTGTGCTTCAAACATaGTTTATTGGATGGACATTC +
Preference number: 5 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQCVLQT*FIGWTF
Trigger: GAATGTCCATCCAATAAACAATGTTTGAAGCACACA...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACTGTAAAGTGGTCCCATaGAGGCTCTCCCAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNCKVVP*RLSQLE
Trigger: CTCCAACTGGGAGAGCCTCAATGGGACCACTTTACA...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp TTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACAGTGCATTCAATATGTCTaGCTACCTAAATGGATGACA +
Preference number: 5 (lower is better)
Translates to: FLSMKSASVQLSAGSSSQCIQYV*LPKWMT
Trigger: TGTCATCCATTTAGGTAGCAAGACATATTGAATGCA...CTGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp ATTTCTGTCCATGAAAAGTGCTTCTGTACAGCTCTCTGCAGGCAGCTCTTCACACTCTTTATGACTTTGTaGGTATGGATGAACGCAAGA +
Preference number: 5 (lower is better)
Translates to: ISVHEKCFCTALCRQLFTLFMTL*VWMNAR
Trigger: TCTTGCGTTCATCCATACCAACAAAGTCATAAAGAG...TGTGAAGAGCTGCCTGCAGAGAGCTGTACAGAAGCACTTTTCATGGACAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS TCA 90 bp GATGAGTCTAGTAACAGTGCCATGGTCATAGACAGACTTCCGGAGTaGCCATGGATCTTAAAGCATATTTTGGATCAACAGAGGAAAGTA +
Preference number: 5 (lower is better)
Translates to: DESSNSAMVIDRLPE*PWILKHILDQQRKV
Trigger: TACTTTCCTCTGTTGATCCAAAATATGCTTTAAGATCCATGGTCACTCCGGAAGTCTGTCTATGACCATGGCACTGTTACTAGACTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS TCA 90 bp GAGAGGTGTGGAAGTCAGATACACTCCATTGCTATTGTCATCCCATaGCTCAGTGATCTTTACAGGCTAGAACCAAAGCATAAGAATCTT +
Preference number: 5 (lower is better)
Translates to: ERCGSQIHSIAIVIP*LSDLYRLEPKHKNL
Trigger: AAGATTCTTATGCTTTGGTTCTAGCCTGTAAAGATCACTGAGTCATGGGATGACAATAGCAATGGAGTGTATCTGACTTCCACACCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS CCA 90 bp CCAGCTGATGGATGCTTCCTTTTGAGTCCTGTGGCCAAAATAATTTaGATAACTTGTACTGTTGTAGGGCAAATTCATGCAGAGTTCCAA +
Preference number: 5 (lower is better)
Translates to: PADGCFLLSPVAKII*ITCTVVGQIHAEFQ
Trigger: TTGGAACTCTGCATGAATTTGCCCTACAACAGTACAAGTTATCCAAATTATTTTGGCCACAGGACTCAAAAGGAAGCATCCATCAGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CCA 90 bp GAACCCATCGCAGATCACTGTGTGCTTCAAACATTGTTTATTGGATaGACATTCCCAAAGATCTCTCTCTTTACAACCACAGTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: EPIADHCVLQTLFIG*TFPKISLFTTTVFL
Trigger: GAGGAAAACTGTGGTTGTAAAGAGAGAGATCTTTGGGAATGTCCATCCAATAAACAATGTTTGAAGCACACAGTGATCTGCGATGGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CCA 90 bp CTGGGAACCCATCGCAGATCACTGTGTGCTTCAAACATTGTTTATTaGATGGACATTCCCAAAGATCTCTCTCTTTACAACCACAGTTTT +
Preference number: 5 (lower is better)
Translates to: LGTHRRSLCASNIVY*MDIPKDLSLYNHSF
Trigger: AAAACTGTGGTTGTAAAGAGAGAGATCTTTGGGAATGTCCATCCAATAAACAATGTTTGAAGCACACAGTGATCTGCGATGGGTTCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACCCTTCCACAGAGCAATaGCTTTCCGTTTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNPSTEQ*LSVFLL
Trigger: CAGCAGGAAAACGGAAAGCAATTGCTCTGTGGAAGG...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGGTGACCACAATTCAGTaGCTGGATTTCACACTCTCC +
Preference number: 5 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQVTTIQ*LDFTLS
Trigger: GGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCAC...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS CCA 90 bp ATTCAGCCACGCCAAAAGAATAAAATCCTGTTATTTGTAGCAACATaGATGAGCCTGGAGGACATTCTGTTTAGTGAAATAAGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: IQPRQKNKILLFVAT*MSLEDILFSEISQA
Trigger: TGCCTGGCTTATTTCACTAAACAGAATGTCCTCCAGGCTCATCCATGTTGCTACAAATAACAGGATTTTATTCTTTTGGCGTGGCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS CCA 90 bp GAACCCATCGCAGATCACTGTGTGCTTCAAACATTGTTTATTGGATaGACATTCCCAAAGATCTCTCTCTTTACAACCTTCCACATATTC +
Preference number: 5 (lower is better)
Translates to: EPIADHCVLQTLFIG*TFPKISLFTTFHIF
Trigger: GAATATGTGGAAGGTTGTAAAGAGAGAGATCTTTGGGAATGTCCATCCAATAAACAATGTTTGAAGCACACAGTGATCTGCGATGGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505754.1
CDS-3UTR CAA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTGTTGTAGCCATTACATaGCAGTTTCCCGGGGATGCA +
Preference number: 5 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTVVAIT*QFPGDA
Trigger: TGCATCCCCGGGAAACTGCAATGTAATGGCTACAAC...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCATTGCAATCACAGTTTaGCTCATCACTCAAATCCCC +
Preference number: 5 (lower is better)
Translates to: TNMQICSARLSISVHEKCIAITV*LITQIP
Trigger: GGGGATTTGAGTGATGAGCAAAACTGTGATTGCAAT...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000508498.5
CDS-3UTR CAA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATGATGGATGGTCTAGATaGTTGATGCCAAGCACCACT +
Preference number: 5 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHDGWSR*LMPSTT
Trigger: AGTGGTGCTTGGCATCAACAATCTAGACCATCCATC...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp ACAAACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCATTTGCAGTGCACGATaGAGCATTTCTGTCCATGAA +
Preference number: 5 (lower is better)
Translates to: TNMQICSARLSISVHEKCICSAR*SISVHE
Trigger: TTCATGGACAGAAATGCTCAATCGTGCACTGCAAAT...GCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS TCA 90 bp AAGACAGAAGTGCAGGAATTACCTAGACATGTAACACACTTCAGTTaGAGGATAAGGTTTGTCCTCTTCCATCTATTGATGGGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: KTEVQELPRHVTHFS*RIRFVLFHLLMGEN
Trigger: ATTTTCCCCCATCAATAGATGGAAGAGGACAAACCTTATCCTTCAACTGAAGTGTGTTACATGTCTAGGTAATTCCTGCACTTCTGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515827.1
CDS GCA 90 bp TTGTCCAGGGTGTATCCTCATCCCAGTTTGCCCTTTTGTTCATGTTaGAAAGTTCCTACGTCACTCAATAATATGCTACCTAAAAATTCT +
Preference number: 5 (lower is better)
Translates to: LSRVYPHPSLPFCSC*KVPTSLNNMLPKNS
Trigger: AGAATTTTTAGGTAGCATATTATTGAGTGACGTAGGAACTTTGCAACATGAACAAAAGGGCAAACTGGGATGAGGATACACCCTGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS-3UTR CAA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCAAACAGCATGATATGTaGATAGCAACTGAGGCGATG +
Preference number: 5 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLKQHDM*IATEAM
Trigger: CATCGCCTCAGTTGCTATCAACATATCATGCTGTTT...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp CGTGACCACAATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTCAAATTCTGCTGACATaGCTGCTTTCAGTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: RDHNSVAGFHTLLRFIQTQILLT*LLSVWF
Trigger: AAACCAAACTGAAAGCAGCAATGTCAGCAGAATTTG...AGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATTGTGGTCACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACTGCTCTGTTGTGGGATaGCAATCACAGTTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNCSVVG*QSQFCS
Trigger: TGAGCAAAACTGTGATTGCAATCCCACAACAGAGCA...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273857.9
CDS-3UTR CAA 90 bp ATTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAAACACACACGCATGGTTaGCACATTCCAGCTCATCAT +
Preference number: 5 (lower is better)
Translates to: IILAFNKSNDELLGSAHQTHTHG*HIPAHH
Trigger: ATGATGAGCTGGAATGTGCAAACCATGCGTGTGTGT...TTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp AATTCAGTTGCTGGATTTCACACTCTCCTTAGGTTTATACAAACTGAAGGACAGATTTGCAGTGCACGATaGAGCATTTCTGTCCATGAA +
Preference number: 5 (lower is better)
Translates to: NSVAGFHTLLRFIQTEGQICSAR*SISVHE
Trigger: TTCATGGACAGAAATGCTCAATCGTGCACTGCAAAT...CTGTCCTTCAGTTTGTATAAACCTAAGGAGAGTGTGAAATCCAGCAACTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACTGTTCATACAGGCACTaGTATTCCTGTGACTTTGGT +
Preference number: 5 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNCSYRH*YSCDFG
Trigger: ACCAAAGTCACAGGAATACAAGTGCCTGTATGAACA...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273857.9
CDS-3UTR CAA 90 bp ATTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAAGATGGATGCTTCCTTTaGAGTCCTGTGGCCAAAATA +
Preference number: 5 (lower is better)
Translates to: IILAFNKSNDELLGSAHQDGCFL*SPVAKI
Trigger: TATTTTGGCCACAGGACTCAAAAGGAAGCATCCATC...TTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp AACATGCAAATTTGCAGTGCACGATTGAGCATTTCTGTCCATGAAAAGTGCTTCTTTATAACAGTTGGTTaGAACAAGTGCAGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: NMQICSARLSISVHEKCFFITVG*NKCREK
Trigger: CTTTTCCCTGCACTTGTTCAAACCAACTGTTATAAA...GAAGCACTTTTCATGGACAGAAATGCTCAATCGTGCACTGCAAATTTGCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000508498.5
ENST00000610355.4
CDS-3UTR CAA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCATTTTCCTCTGGAAATaGACTGCAATCTGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLIFLWK*TAICVF
Trigger: GAAGACACAGATTGCAGTCAATTTCCAGAGGAAAAT...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp TTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACTGTTCCTGTATCAATTaGGTCACAGATGGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LSWLLINQMTSYWVQHTNCSCIN*VTDGSP
Trigger: AGGAGAACCATCTGTGACCAAATTGATACAGGAACA...GTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATATTTGCAGTGCACGATaGAGCATTTCTGTCCATGAA +
Preference number: 5 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHICSAR*SISVHE
Trigger: TTCATGGACAGAAATGCTCAATCGTGCACTGCAAAT...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCATGCTCTTTATGACTTaGTTGGTATGGATGAACGCA +
Preference number: 5 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLMLFMT*LVWMNA
Trigger: TGCGTTCATCCATACCAACAAAGTCATAAAGAGCAT...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp TTCTTGAACTTTCATACAATCGTGACCACAATTCAGTTGCTGGATTTCACACTCTATTCACATCACATTTaGGTACCAAAATGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: FLNFHTIVTTIQLLDFTLYSHHI*VPKWCK
Trigger: CTTGCACCATTTTGGTACCAAAATGTGATGTGAATA...GAGTGTGAAATCCAGCAACTGAATTGTGGTCACGATTGTATGAAAGTTCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATCTCTTTATGACTTTGTaGGTATGGATGAACGCAAGA +
Preference number: 5 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHLFMTL*VWMNAR
Trigger: TCTTGCGTTCATCCATACCAACAAAGTCATAAAGAG...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp ATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAACATTTTATAACAGTTGGTTaGAACAAGTGCAGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: ILAFNKSNDELLGSAHQHFITVG*NKCREK
Trigger: CTTTTCCCTGCACTTGTTCAAACCAACTGTTATAAA...ATGTTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp ATTATCTTGGCTTTTAATAAATCAAATGACGAGTTACTGGGTTCAGCACACCAATATTCACATCACATTTaGGTACCAAAATGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: IILAFNKSNDELLGSAHQYSHHI*VPKWCK
Trigger: CTTGCACCATTTTGGTACCAAAATGTGATGTGAATA...TTGGTGTGCTGAACCCAGTAACTCGTCATTTGATTTATTAAAAGCCAAGATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS-3UTR CAA 90 bp CAAAATATTGCCCATAAATATAGATGTAGTTGTTGCAGTCTCAATCAGCCAACTTGTGTGCTTCAAACATaGTTTATTGGATGGACATTC +
Preference number: 5 (lower is better)
Translates to: QNIAHKYRCSCCSLNQPTCVLQT*FIGWTF
Trigger: GAATGTCCATCCAATAAACAATGTTTGAAGCACACA...AGTTGGCTGATTGAGACTGCAACAACTACATCTATATTTATGGGCAATATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273857.9
ENST00000610355.4
CDS GCA 72 bp CATCAGCTCTCAAGACCGGCTTTGGGGACCCGGCTCTaGGGCAGCGCTCTTCCGGAGCGAGGGCAGGAGACT +
Preference number: 6 (lower is better)
Translates to: HQLSRPALGTRL*GSALPERGQET
Trigger: AGTCTCCTGCCCTCGCTCCGGAAGAGCGCTGCCGCAGAGCCGGGTCCCCAAAGCCGGTCTTGAGAGCTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000610355.4
CDS GCA 72 bp ATCAGCTCTCAAGACGTCTGGGGCAGGCAAGACTGCTaGACAGTCCCTCCAGCCACCCGGCGCCCGAGACGC +
Preference number: 6 (lower is better)
Translates to: ISSQDVWGRQDC*TVPPATRRPRR
Trigger: GCGTCTCGGGCGCCGGGTGGCTGGAGGGACTGTGCAGCAGTCTTGCCTGCCCCAGACGTCTTGAGAGCTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510974.1
CDS CCA 72 bp AGCAGTACGTGTCAGGCTCTAGCCACTGCTCCGGGTTaGGCAAGCAGACAGGCCGGACGTAGCCAGTCTCAC +
Preference number: 6 (lower is better)
Translates to: SSTCQALATAPG*ASRQAGRSQSH
Trigger: GTGAGACTGGCTACGTCCGGCCTGTCTGCTTGCCCAACCCGGAGCAGTGGCTAGAGCCTGACACGTACTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CAA 72 bp CTTCCAGGGCGACTCGTCCGACCTCCAAGGATCCTTTaGTTCATTCGGGCAGCAGGGCGGCGCCCACAGTCT +
Preference number: 6 (lower is better)
Translates to: LPGRLVRPPRIL*FIRAAGRRPQS
Trigger: AGACTGTGGGCGCCGCCCTGCTGCCCGAATGAACAAAAGGATCCTTGGAGGTCGGACGAGTCGCCCTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000515827.1
ENST00000610355.4
CDS CCA 72 bp ATGTCCACTGGGTTCACTCTGCAGAGAACACTGCCATaGCCACCTTCCAGGGCGACTCGTCCGACCTCCAAG +
Preference number: 6 (lower is better)
Translates to: MSTGFTLQRTLP*PPSRATRPTSK
Trigger: CTTGGAGGTCGGACGAGTCGCCCTGGAAGGTGGCCATGGCAGTGTTCTCTGCAGAGTGAACCCAGTGGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000515827.1
ENST00000610355.4
CDS CAA 90 bp CATGGCCACCTTCCAGGGCGACTCGTCCGACCTCCAAGGATCCTTTaGTTCATTCGGGCAGCAGGGCGGCGCCCACAGTCTTGTTTAGTA +
Preference number: 6 (lower is better)
Translates to: HGHLPGRLVRPPRIL*FIRAAGRRPQSCLV
Trigger: TACTAAACAAGACTGTGGGCGCCGCCCTGCTGCCCGAATGAACAAAAGGATCCTTGGAGGTCGGACGAGTCGCCCTGGAAGGTGGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000515827.1
ENST00000610355.4
CDS GCA 72 bp CACTCCATGGCGATGCAGCGCCCGTCCCCGCAGCGATaGTCTGTTGTGGGATTGCAATCACAGTTTTGCTCA +
Preference number: 6 (lower is better)
Translates to: HSMAMQRPSPQR*SVVGLQSQFCS
Trigger: TGAGCAAAACTGTGATTGCAATCCCACAACAGAGCATCGCTGCGGGGACGGGCGCTGCATCGCCATGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000508498.5
CDS GCA 72 bp CAGATATGTCCACTGGGTTCACTCTGCAGAGAACACTaGCATGGCCACCTTCCAGGGCGACTCGTCCGACCT +
Preference number: 6 (lower is better)
Translates to: QICPLGSLCREH*HGHLPGRLVRP
Trigger: AGGTCGGACGAGTCGCCCTGGAAGGTGGCCATGGCAGTGTTCTCTGCAGAGTGAACCCAGTGGACATATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000515827.1
ENST00000610355.4
CDS CCA 72 bp GGGAGAGAAGCATCCGTAGTCCAGGCTGGAACGTGTTaGTCGGGATGTGCAGTAGACACCACAGTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: GREASVVQAGTC*SGCAVDTTVLW
Trigger: CCAGAGCACTGTGGTGTCTACTGCACATCCCGACCAACACGTTCCAGCCTGGACTACGGATGCTTCTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000510974.1
CDS CCA 72 bp TTGGTCCCCTGGGAGAGAAGCATCCGTAGTCCAGGCTaGAACGTGTTGGTCGGGATGTGCAGTAGACACCAC +
Preference number: 6 (lower is better)
Translates to: LVPWERSIRSPG*NVLVGMCSRHH
Trigger: GTGGTGTCTACTGCACATCCCGACCAACACGTTCCAGCCTGGACTACGGATGCTTCTCTCCCAGGGGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000510974.1
CDS GCA 72 bp CACTCCATGGCGATGCAGCGCCCGTCCCCGCAGCGATaGTCTGTTGTGGGATTGCAATCTGGAGAAATGAAA +
Preference number: 6 (lower is better)
Translates to: HSMAMQRPSPQR*SVVGLQSGEMK
Trigger: TTTCATTTCTCCAGATTGCAATCCCACAACAGAGCATCGCTGCGGGGACGGGCGCTGCATCGCCATGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS CAA 72 bp TGGGAGAGAAGCATCCGTAGTCCAGGCTGGAACGTGTaGGTCGGGATGTGCAGTAGACACCACAGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: WERSIRSPGWNV*VGMCSRHHSAL
Trigger: CAGAGCACTGTGGTGTCTACTGCACATCCCGACCAACACGTTCCAGCCTGGACTACGGATGCTTCTCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000510974.1
CDS CAA 90 bp ATGGCGATGCAGCGCCCGTCCCCGCAGCGATGCTCTGTTGTGGGATaGCAATCTGGAGAAATGAAAACTCACGAGGATGCAGAGAACCAG +
Preference number: 6 (lower is better)
Translates to: MAMQRPSPQRCSVVG*QSGEMKTHEDAENQ
Trigger: CTGGTTCTCTGCATCCTCGTGAGTTTTCATTTCTCCAGATTGCAATCCCACAACAGAGCATCGCTGCGGGGACGGGCGCTGCATCGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS GCA 72 bp GCAGGCCAGCTGACTCAATATCTCCTGCCAGCCATCTaGACACACATGGTGTTCTGTGGCAGCTCTGTGAAC +
Preference number: 6 (lower is better)
Translates to: AGQLTQYLLPAI*THMVFCGSSVN
Trigger: GTTCACAGAGCTGCCACAGAACACCATGTGTGTGCAGATGGCTGGCAGGAGATATTGAGTCAGCTGGCCTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS GCA 72 bp GAGGCCCACCGCTGTCACCCATGCATGAATCAACTGTaGCAGACTCATAGCCAGCACATATCATCCGAGTGG +
Preference number: 6 (lower is better)
Translates to: EAHRCHPCMNQL*QTHSQHISSEW
Trigger: CCACTCGGATGATATGTGCTGGCTATGAGTCTGGCACAGTTGATTCATGCATGGGTGACAGCGGTGGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CAA 72 bp CAGCGCCCGTCCCCGCAGCGATGCTCTGTTGTGGGATaGCAATCTGGAGAAATGAAAACTCACGAGGATGCA +
Preference number: 6 (lower is better)
Translates to: QRPSPQRCSVVG*QSGEMKTHEDA
Trigger: TGCATCCTCGTGAGTTTTCATTTCTCCAGATTGCAATCCCACAACAGAGCATCGCTGCGGGGACGGGCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS TCA 72 bp TACAGGGCAGGAGTCCATGACTGTCATCGCCATCAATaGTGCACTCAGGGAAGGCGAGGGTACAGCCAAACA +
Preference number: 6 (lower is better)
Translates to: YRAGVHDCHRHQ*CTQGRRGYSQT
Trigger: TGTTTGGCTGTACCCTCGCCTTCCCTGAGTGCATCATTGATGGCGATGACAGTCATGGACTCCTGCCCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS TCA 72 bp TGGCGTGGTAGGGCAGCATCTGACACTGGCTGTGGGTaGTGTTCATACAGGCACCAACATAGGAAAGCAGGA +
Preference number: 6 (lower is better)
Translates to: WRGRAASDTGCG*CSYRHQHRKAG
Trigger: TCCTGCTTTCCTATGTTGGTGCCTGTATGAACATCACCCACAGCCAGTGTCAGATGCTGCCCTACCACGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502252.5
ENST00000610355.4
CDS CCA 72 bp CGATGCAGCGCCCGTCCCCGCAGCGATGCTCTGTTGTaGGATTGCAATCACAGTTTTGCTCATCACTCAAAT +
Preference number: 6 (lower is better)
Translates to: RCSARPRSDALL*DCNHSFAHHSN
Trigger: ATTTGAGTGATGAGCAAAACTGTGATTGCAATCCCACAACAGAGCATCGCTGCGGGGACGGGCGCTGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000508498.5
CDS CAA 90 bp TTGGTCCCCTGGGAGAGAAGCATCCGTAGTCCAGGCTGGAACGTGTaGGTCGGGATGTGCAGTAGACACCACAGTGCTCTGGTTATAAAT +
Preference number: 6 (lower is better)
Translates to: LVPWERSIRSPGWNV*VGMCSRHHSALVIN
Trigger: ATTTATAACCAGAGCACTGTGGTGTCTACTGCACATCCCGACCAACACGTTCCAGCCTGGACTACGGATGCTTCTCTCCCAGGGGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000510974.1
CDS CAA 90 bp GCCAGGAGTAATTCACCATCCCCAGGACTGATTCACAGCCTTCTTTaGCAGCCTCACAGAAGGACCTACAGGGCAGGAGTCCATGACTGT +
Preference number: 6 (lower is better)
Translates to: ARSNSPSPGLIHSLL*QPHRRTYRAGVHDC
Trigger: ACAGTCATGGACTCCTGCCCTGTAGGTCCTTCTGTGAGGCTGCAAAAGAAGGCTGTGAATCAGTCCTGGGGATGGTGAATTACTCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS TCA 72 bp GATGGTTCTCCTAAACCCATCTGCTTGCAGGCCAGCTaGCTCAATATCTCCTGCCAGCCATCTGCACACACA +
Preference number: 6 (lower is better)
Translates to: DGSPKPICLQAS*LNISCQPSAHT
Trigger: TGTGTGTGCAGATGGCTGGCAGGAGATATTGAGTCAGCTGGCCTGCAAGCAGATGGGTTTAGGAGAACCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS GCA 72 bp ACTCAGCTCAACGATGCTGATGTCATAGTCCACCACTaGTCGACTGTAGCGGGGATGCAGGATGATGGTCTT +
Preference number: 6 (lower is better)
Translates to: TQLNDADVIVHH*STVAGMQDDGL
Trigger: AAGACCATCATCCTGCATCCCCGCTACAGTCGAGCAGTGGTGGACTATGACATCAGCATCGTTGAGCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CAA 72 bp GTCACTCCAGTCGTCACAGTCGTTGTAGCCATTACATaGCAGTTTCCCGGGGATGCAGATTCCACTGGCACA +
Preference number: 6 (lower is better)
Translates to: VTPVVTVVVAIT*QFPGDADSTGT
Trigger: TGTGCCAGTGGAATCTGCATCCCCGGGAAACTGCAATGTAATGGCTACAACGACTGTGACGACTGGAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CAA 72 bp AGTTCATGTAAAGTGGTCCCATTGAGGCTCTCCCAGTaGGAGTGTAATGTCAGCCACCGCGGCTCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: SSCKVVPLRLSQ*ECNVSHRGSFS
Trigger: GGAGAAAGAGCCGCGGTGGCTGACATTACACTCCAACTGGGAGAGCCTCAATGGGACCACTTTACATGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000515827.1
ENST00000610355.4
CDS CAA 90 bp CTTGCAGTCCTCGTCACCATCACATTGAAACGTGCTGGGGATACATaGTCCATTTCTGCATTCCACCAGACCCTGGCTGTGACAGGAGCA +
Preference number: 6 (lower is better)
Translates to: LAVLVTITLKRAGDT*SISAFHQTLAVTGA
Trigger: TGCTCCTGTCACAGCCAGGGTCTGGTGGAATGCAGAAATGGACAATGTATCCCCAGCACGTTTCAATGTGATGGTGACGAGGACTGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000508498.5
CDS CAA 90 bp CTTGCAGTCCTCGTCACCATCACATTGAAACGTGCTGGGGATACATaGTCCATTTCTGCATTCCACCAGACCCTGGCTGTGACAGGCACA +
Preference number: 6 (lower is better)
Translates to: LAVLVTITLKRAGDT*SISAFHQTLAVTGT
Trigger: TGTGCCTGTCACAGCCAGGGTCTGGTGGAATGCAGAAATGGACAATGTATCCCCAGCACGTTTCAATGTGATGGTGACGAGGACTGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000610355.4
CDS CAA 90 bp AGGGAGGACATAGGTTTGAGAAAAGAAGAAAAGCATAAGAAGTGCTaGGGCAGGAACCAGAAGAGCACAGGGAGCCAGGGCAGAGGCTGG +
Preference number: 6 (lower is better)
Translates to: REDIGLRKEEKHKKC*GRNQKSTGSQGRGW
Trigger: CCAGCCTCTGCCCTGGCTCCCTGTGCTCTTCTGGTTCCTGCCCAAGCACTTCTTATGCTTTTCTTCTTTTCTCAAACCTATGTCCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS TCA 72 bp AATAGGAACCGGAGGAGGTTAGCAGTCGCCAGCTTCTaGGAGCAGCCATTGCCCATGTTATTGTCATCAGCT +
Preference number: 6 (lower is better)
Translates to: NRNRRRLAVASF*EQPLPMLLSSA
Trigger: AGCTGATGACAATAACATGGGCAATGGCTGCTCTCAGAAGCTGGCGACTGCTAACCTCCTCCGGTTCCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000510974.1
ENST00000610355.4
CDS TCA 72 bp GAAATCCGGCCAGGAGTAATTCACCATCCCCAGGACTaGTTCACAGCCTTCTTTTGCAGCCTCACAGAAGGA +
Preference number: 6 (lower is better)
Translates to: EIRPGVIHHPQD*FTAFFCSLTEG
Trigger: TCCTTCTGTGAGGCTGCAAAAGAAGGCTGTGAATCAGTCCTGGGGATGGTGAATTACTCCTGGCCGGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS GCA 72 bp AGTCGTTGTAGCCATTACATTGCAGTTTCCCGGGGATaGAGATTCCACTGGCACACAGAAAGTTCTCACCCC +
Preference number: 6 (lower is better)
Translates to: SRCSHYIAVSRG*RFHWHTESSHP
Trigger: GGGGTGAGAACTTTCTGTGTGCCAGTGGAATCTGCATCCCCGGGAAACTGCAATGTAATGGCTACAACGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS GCA 72 bp CACATTGAAACGTGCTGGGGATACATTGTCCATTTCTaGATTCCACCAGACCCTGGCTGTGACAGGAGCAGT +
Preference number: 6 (lower is better)
Translates to: HIETCWGYIVHF*IPPDPGCDRSS
Trigger: ACTGCTCCTGTCACAGCCAGGGTCTGGTGGAATGCAGAAATGGACAATGTATCCCCAGCACGTTTCAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000508498.5
CDS GCA 72 bp CACATTGAAACGTGCTGGGGATACATTGTCCATTTCTaGATTCCACCAGACCCTGGCTGTGACAGGCACAGT +
Preference number: 6 (lower is better)
Translates to: HIETCWGYIVHF*IPPDPGCDRHS
Trigger: ACTGTGCCTGTCACAGCCAGGGTCTGGTGGAATGCAGAAATGGACAATGTATCCCCAGCACGTTTCAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000610355.4
CDS CCA 72 bp CATTACATTGCAGTTTCCCGGGGATGCAGATTCCACTaGCACACAGAAAGTTCTCACCCCTTCCACAGAGCA +
Preference number: 6 (lower is better)
Translates to: HYIAVSRGCRFH*HTESSHPFHRA
Trigger: TGCTCTGTGGAAGGGGTGAGAACTTTCTGTGTGCCAGTGGAATCTGCATCCCCGGGAAACTGCAATGTAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CCA 72 bp AGAGTAGAACAGTGGTTACTAGAGGCCAGAAGGGTATaGAGGAGGAGGGACAAAGAGAGATTGCTGCCAGGT +
Preference number: 6 (lower is better)
Translates to: RVEQWLLEARRV*RRRDKERLLPG
Trigger: ACCTGGCAGCAATCTCTCTTTGTCCCTCCTCCTCCATACCCTTCTGGCCTCTAGTAACCACTGTTCTACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS CCA 72 bp GTCCCCGCAGCGATGCTCTGTTGTGGGATTGCAATCTaGAGAAATGAAAACTCACGAGGATGCAGAGAACCA +
Preference number: 6 (lower is better)
Translates to: VPAAMLCCGIAI*RNENSRGCREP
Trigger: TGGTTCTCTGCATCCTCGTGAGTTTTCATTTCTCCAGATTGCAATCCCACAACAGAGCATCGCTGCGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS CAA 90 bp TCACAAGACTGCCCATTTACTAGAAGTTCATGTAAAGTGGTCCCATaGAGGCTCTCCCAGTTGGAGTGTAATGTCAGCCACCGCGGCTCT +
Preference number: 6 (lower is better)
Translates to: SQDCPFTRSSCKVVP*RLSQLECNVSHRGS
Trigger: AGAGCCGCGGTGGCTGACATTACACTCCAACTGGGAGAGCCTCAATGGGACCACTTTACATGAACTTCTAGTAAATGGGCAGTCTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000515827.1
ENST00000610355.4
CDS TCA 72 bp ACTGTTGTTCGGGTCACAGAGAGAGCTACCACCACATaGATCAAGGCAGGGATTGTAGAGGCATCTTTGGTC +
Preference number: 6 (lower is better)
Translates to: TVVRVTERATTT*IKAGIVEASLV
Trigger: GACCAAAGATGCCTCTACAATCCCTGCCTTGATTCATGTGGTGGTAGCTCTCTCTGTGACCCGAACAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS GCA 72 bp ATCCGTAGTCCAGGCTGGAACGTGTTGGTCGGGATGTaGAGTAGACACCACAGTGCTCTGGTTATAAATTGT +
Preference number: 6 (lower is better)
Translates to: IRSPGWNVLVGM*SRHHSALVINC
Trigger: ACAATTTATAACCAGAGCACTGTGGTGTCTACTGCACATCCCGACCAACACGTTCCAGCCTGGACTACGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000510974.1
CDS GCA 72 bp ATTTGGTCACAGATGGTTCTCCTAAACCCATCTGCTTaGAGGCCAGCTGACTCAATATCTCCTGCCAGCCAT +
Preference number: 6 (lower is better)
Translates to: IWSQMVLLNPSA*RPADSISPASH
Trigger: ATGGCTGGCAGGAGATATTGAGTCAGCTGGCCTGCAAGCAGATGGGTTTAGGAGAACCATCTGTGACCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CAA 72 bp CATCACACCACAGGTCACGTGACACACACGCATGGTTaGCACATTCCAGCTCATCATCTTGGCAAAATGAGC +
Preference number: 6 (lower is better)
Translates to: HHTTGHVTHTHG*HIPAHHLGKMS
Trigger: GCTCATTTTGCCAAGATGATGAGCTGGAATGTGCAAACCATGCGTGTGTGTCACGTGACCTGTGGTGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000504584.1
ENST00000505754.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CAA 72 bp AGCCACCGCGGCTCTTTCTCCTGTTCCTGTATCAATTaGGTCACAGATGGTTCTCCTAAACCCATCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SHRGSFSCSCIN*VTDGSPKPICL
Trigger: CAAGCAGATGGGTTTAGGAGAACCATCTGTGACCAAATTGATACAGGAACAGGAGAAAGAGCCGCGGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CAA 90 bp CGGCTTCACCATCACACCACAGGTCACGTGACACACACGCATGGTTaGCACATTCCAGCTCATCATCTTGGCAAAATGAGCAGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: RLHHHTTGHVTHTHG*HIPAHHLGKMSSFS
Trigger: AGAAAAACTGCTCATTTTGCCAAGATGATGAGCTGGAATGTGCAAACCATGCGTGTGTGTCACGTGACCTGTGGTGTGATGGTGAAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000504584.1
ENST00000505754.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CAA 90 bp TTTACTAGAAGTTCATGTAAAGTGGTCCCATTGAGGCTCTCCCAGTaGGAGTGTAATGTCAGCCACCGCGGCTCTTTCTCCTGTTCCTGT +
Preference number: 6 (lower is better)
Translates to: FTRSSCKVVPLRLSQ*ECNVSHRGSFSCSC
Trigger: ACAGGAACAGGAGAAAGAGCCGCGGTGGCTGACATTACACTCCAACTGGGAGAGCCTCAATGGGACCACTTTACATGAACTTCTAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CAA 90 bp TTTACTAGAAGTTCATGTAAAGTGGTCCCATTGAGGCTCTCCCAGTaGGAGTGTAATGTCAGCCACCGCGGCTCTTTCTCCTGTTCCTCT +
Preference number: 6 (lower is better)
Translates to: FTRSSCKVVPLRLSQ*ECNVSHRGSFSCSS
Trigger: AGAGGAACAGGAGAAAGAGCCGCGGTGGCTGACATTACACTCCAACTGGGAGAGCCTCAATGGGACCACTTTACATGAACTTCTAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515827.1
CDS TCA 72 bp CCCCTTCCACAGAGCAATTGCTTTCCGTTTTCCTGCTaGGGTGAGAAGCAAATTCTGCTGACATTGCTGCTT +
Preference number: 6 (lower is better)
Translates to: PLPQSNCFPFSC*GEKQILLTLLL
Trigger: AAGCAGCAATGTCAGCAGAATTTGCTTCTCACCTCAGCAGGAAAACGGAAAGCAATTGCTCTGTGGAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS GCA 72 bp CATCCTTGCAGTCCTCGTCACCATCACATTGAAACGTaGTGGGGATACATTGTCCATTTCTGCATTCCACCA +
Preference number: 6 (lower is better)
Translates to: HPCSPRHHHIET*WGYIVHFCIPP
Trigger: TGGTGGAATGCAGAAATGGACAATGTATCCCCAGCACGTTTCAATGTGATGGTGACGAGGACTGCAAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS GCA 72 bp CGGGGATGCAGGATGATGGTCTTCACAAAGCGTGTCTaGATGAACACTGATGGATGGTCTAGATTGTTGATG +
Preference number: 6 (lower is better)
Translates to: RGCRMMVFTKRV*MNTDGWSRLLM
Trigger: CATCAACAATCTAGACCATCCATCAGTGTTCATGCAGACACGCTTTGTGAAGACCATCATCCTGCATCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CCA 72 bp AGCGCTCTTCCGGAGCGAGGGCAGGAGACTGTTTCATaGATAAAAAGTCTCGCTTATTCTTCTGTCCACTTT +
Preference number: 6 (lower is better)
Translates to: SALPERGQETVS*IKSLAYSSVHF
Trigger: AAAGTGGACAGAAGAATAAGCGAGACTTTTTATCCATGAAACAGTCTCCTGCCCTCGCTCCGGAAGAGCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000610355.4
CDS CCA 72 bp TCACCATCACACCACAGGTCACGTGACACACACGCATaGTTTGCACATTCCAGCTCATCATCTTGGCAAAAT +
Preference number: 6 (lower is better)
Translates to: SPSHHRSRDTHA*FAHSSSSSWQN
Trigger: ATTTTGCCAAGATGATGAGCTGGAATGTGCAAACCATGCGTGTGTGTCACGTGACCTGTGGTGTGATGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000504584.1
ENST00000505754.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CCA 72 bp CTTCAGTGGCTGACAGGCATGAGAGAGTACAACAGATaGCAGAAACAAGTAGCTCACCACAGTCCCATTCAT +
Preference number: 6 (lower is better)
Translates to: LQWLTGMREYNR*QKQVAHHSPIH
Trigger: ATGAATGGGACTGTGGTGAGCTACTTGTTTCTGCCATCTGTTGTACTCTCTCATGCCTGTCAGCCACTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504584.1
ENST00000505754.1
CDS CAA 72 bp ATAGGTTTGAGAAAAGAAGAAAAGCATAAGAAGTGCTaGGGCAGGAACCAGAAGAGCACAGGGAGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: IGLRKEEKHKKC*GRNQKSTGSQG
Trigger: GCCCTGGCTCCCTGTGCTCTTCTGGTTCCTGCCCAAGCACTTCTTATGCTTTTCTTCTTTTCTCAAACCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS CAA 90 bp TTCACAAAGCGTGTCTGCATGAACACTGATGGATGGTCTAGATTGTaGATGCCAAGCACCACTTTCCAAACTGCAGCATTCTCTCTCCCC +
Preference number: 6 (lower is better)
Translates to: FTKRVCMNTDGWSRL*MPSTTFQTAAFSLP
Trigger: GGGGAGAGAGAATGCTGCAGTTTGGAAAGTGGTGCTTGGCATCAACAATCTAGACCATCCATCAGTGTTCATGCAGACACGCTTTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CAA 90 bp GATGCACTCAGGGAAGGCGAGGGTACAGCCAAACAGCATGATATGTaGATAGCAACTGAGGCGATGGAGATATGTGAAAAACTTGAGGAA +
Preference number: 6 (lower is better)
Translates to: DALREGEGTAKQHDM*IATEAMEICEKLEE
Trigger: TTCCTCAAGTTTTTCACATATCTCCATCGCCTCAGTTGCTATCAACATATCATGCTGTTTGGCTGTACCCTCGCCTTCCCTGAGTGCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CAA 90 bp AAACATGTTAGGGCACTCCTGCAGGGAAGCTTAACTACTCATGTATaGTTTGCAGAAGAAAGGTTCCCCATTCTGTGGGCAGAGCATCAC +
Preference number: 6 (lower is better)
Translates to: KHVRALLQGSLTTHV*FAEERFPILWAEHH
Trigger: GTGATGCTCTGCCCACAGAATGGGGAACCTTTCTTCTGCAAACAATACATGAGTAGTTAAGCTTCCCTGCAGGAGTGCCCTAACATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS TCA 72 bp AGCGATGCTCTGTTGTGGGATTGCAATCTGGAGAAATaGAAACTCACGAGGATGCAGAGAACCAGCATGACT +
Preference number: 6 (lower is better)
Translates to: SDALLWDCNLEK*KLTRMQRTSMT
Trigger: AGTCATGCTGGTTCTCTGCATCCTCGTGAGTTTTCATTTCTCCAGATTGCAATCCCACAACAGAGCATCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS GCA 72 bp CAATGTTCCAGAGAAATAATGCGGACCTCTCCCTCTTaGAGCTTAAATGGCATTTTATTGCCCATGTGGCCC +
Preference number: 6 (lower is better)
Translates to: QCSREIMRTSPS*SLNGILLPMWP
Trigger: GGGCCACATGGGCAATAAAATGCCATTTAAGCTGCAAGAGGGAGAGGTCCGCATTATTTCTCTGGAACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS GCA 72 bp ACTCCTGCAGGGAAGCTTAACTACTCATGTATTGTTTaGAGAAGAAAGGTTCCCCATTCTGTGGGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: TPAGKLNYSCIV*RRKVPHSVGRA
Trigger: TGCTCTGCCCACAGAATGGGGAACCTTTCTTCTGCAAACAATACATGAGTAGTTAAGCTTCCCTGCAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS CAA 72 bp TGCCCATTTACTAGAAGTTCATGTAAAGTGGTCCCATaGAGGCTCTCCCAGTTGGAGTGTAATGTCAGCCAC +
Preference number: 6 (lower is better)
Translates to: CPFTRSSCKVVP*RLSQLECNVSH
Trigger: GTGGCTGACATTACACTCCAACTGGGAGAGCCTCAATGGGACCACTTTACATGAACTTCTAGTAAATGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000515827.1
ENST00000610355.4
CDS CAA 90 bp GTTTGCAGAAGAAAGGTTCCCCATTCTGTGGGCAGAGCATCACCTTaGACAAAGTCACAGAAGCATAAAAGAGACATATGGAGCAACGAG +
Preference number: 6 (lower is better)
Translates to: VCRRKVPHSVGRASP*TKSQKHKRDIWSNE
Trigger: CTCGTTGCTCCATATGTCTCTTTTATGCTTCTGTGACTTTGTCAAAGGTGATGCTCTGCCCACAGAATGGGGAACCTTTCTTCTGCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS TCA 72 bp TCCACAGAGCAATTGCTTTCCGTTTTCCTGCTGAGGTaGGAAGCAAATTCTGCTGACATTGCTGCTTTCAGT +
Preference number: 6 (lower is better)
Translates to: STEQLLSVFLLR*EANSADIAAFS
Trigger: ACTGAAAGCAGCAATGTCAGCAGAATTTGCTTCTCACCTCAGCAGGAAAACGGAAAGCAATTGCTCTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS TCA 72 bp TGCCAGACTCATAGCCAGCACATATCATCCGAGTGGTaGTGGTCTTCATGTCAAAGTAGGACTGACAATGTT +
Preference number: 6 (lower is better)
Translates to: CQTHSQHISSEW*WSSCQSRTDNV
Trigger: AACATTGTCAGTCCTACTTTGACATGAAGACCATCACCACTCGGATGATATGTGCTGGCTATGAGTCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS GCA 72 bp CTCCAAGTAGTTGGGACTACAAGGAATATGCCAGCATaGCTGGCCTTATATCCAAAAGAACTGCTAGGTAAG +
Preference number: 6 (lower is better)
Translates to: LQVVGTTRNMPA*LALYPKELLGK
Trigger: CTTACCTAGCAGTTCTTTTGGATATAAGGCCAGGCATGCTGGCATATTCCTTGTAGTCCCAACTACTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS CAA 72 bp AGGGAAGGCGAGGGTACAGCCAAACAGCATGATATGTaGATAGCAACTGAGGCGATGGAGATATGTGAAAAA +
Preference number: 6 (lower is better)
Translates to: REGEGTAKQHDM*IATEAMEICEK
Trigger: TTTTTCACATATCTCCATCGCCTCAGTTGCTATCAACATATCATGCTGTTTGGCTGTACCCTCGCCTTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS TCA 72 bp GAAAGGTTCCCCATTCTGTGGGCAGAGCATCACCTTTaGCAAAGTCACAGAAGCATAAAAGAGACATATGGA +
Preference number: 6 (lower is better)
Translates to: ERFPILWAEHHL*QSHRSIKETYG
Trigger: TCCATATGTCTCTTTTATGCTTCTGTGACTTTGTCAAAGGTGATGCTCTGCCCACAGAATGGGGAACCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS GCA 72 bp TTAGAGTGTTCACACAATGCCCTGCAAGGAGGGATATaGTCGCCTGTATTCACATCACATTTTGGTACCAAA +
Preference number: 6 (lower is better)
Translates to: LECSHNALQGGI*SPVFTSHFGTK
Trigger: TTTGGTACCAAAATGTGATGTGAATACAGGCGAGCATATCCCTCCTTGCAGGGCATTGTGTGAACACTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS GCA 72 bp AGGTTTGATTGTCTGAATTTTCCTCTGGAAATTGACTaGAATCTGTGTCTTCAGGCCACTGTAGGCCCACAA +
Preference number: 6 (lower is better)
Translates to: RFDCLNFPLEID*NLCLQATVGPQ
Trigger: TTGTGGGCCTACAGTGGCCTGAAGACACAGATTGCAGTCAATTTCCAGAGGAAAATTCAGACAATCAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000503821.5
ENST00000504584.1
ENST00000505754.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CAA 72 bp TTTGCAGGGAGAGGTGTGGAAGTCAGATACACTCCATaGCTATTGTCATCCCATGACTCAGTGATCTTTACA +
Preference number: 6 (lower is better)
Translates to: FAGRGVEVRYTP*LLSSHDSVIFT
Trigger: TGTAAAGATCACTGAGTCATGGGATGACAATAGCAATGGAGTGTATCTGACTTCCACACCTCTCCCTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS CAA 90 bp TCTGGGAACCCATCGCAGATCACTGTGTGCTTCAAACATTGTTTATaGGATGGACATTCCCAAAGATCTCTCTCTTTACAACCTTCCACA +
Preference number: 6 (lower is better)
Translates to: SGNPSQITVCFKHCL*DGHSQRSLSLQPST
Trigger: TGTGGAAGGTTGTAAAGAGAGAGATCTTTGGGAATGTCCATCCAATAAACAATGTTTGAAGCACACAGTGATCTGCGATGGGTTCCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505754.1
CDS TCA 72 bp GGAAGTCAGATACACTCCATTGCTATTGTCATCCCATaGCTCAGTGATCTTTACAGGCTAGAACCAAAGCAT +
Preference number: 6 (lower is better)
Translates to: GSQIHSIAIVIP*LSDLYRLEPKH
Trigger: ATGCTTTGGTTCTAGCCTGTAAAGATCACTGAGTCATGGGATGACAATAGCAATGGAGTGTATCTGACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS GCA 72 bp ACATGTACCAAGGGAATCAGGCACAGACAATATATCTaGCCTCAAAGTTTGCTCAAAAGCCCAAATCTAACG +
Preference number: 6 (lower is better)
Translates to: TCTKGIRHRQYI*PQSLLKSPNLT
Trigger: CGTTAGATTTGGGCTTTTGAGCAAACTTTGAGGGCAGATATATTGTCTGTGCCTGATTCCCTTGGTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS GCA 72 bp CCAAAGGAAAGGAAATCAGTATATCAAACAGACATCTaGACCCCCACATTCACTGCAGCACTACTCACAATA +
Preference number: 6 (lower is better)
Translates to: PKERKSVYQTDI*TPTFTAALLTI
Trigger: TATTGTGAGTAGTGCTGCAGTGAATGTGGGGGTGCAGATGTCTGTTTGATATACTGATTTCCTTTCCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS GCA 72 bp GATGGGTCTGTTTTTCAGATAAGTAACTACTCTAGCTaGCCCAGGACCCGTAGTTTGTTCTTATTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: DGSVFQISNYSS*PRTRSLFLLLL
Trigger: CAACAACAATAAGAACAAACTACGGGTCCTGGGGCAGCTAGAGTAGTTACTTATCTGAAAAACAGACCCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS CAA 90 bp TCTGGGAACCCATCGCAGATCACTGTGTGCTTCAAACATTGTTTATaGGATGGACATTCCCAAAGATCTCTCTCTTTACAACCACAGTTT +
Preference number: 6 (lower is better)
Translates to: SGNPSQITVCFKHCL*DGHSQRSLSLQPQF
Trigger: AAACTGTGGTTGTAAAGAGAGAGATCTTTGGGAATGTCCATCCAATAAACAATGTTTGAAGCACACAGTGATCTGCGATGGGTTCCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CAA 72 bp GAAAAGAGAAGACTCCCAGCTGATGGATGCTTCCTTTaGAGTCCTGTGGCCAAAATAATTTGGATAACTTGT +
Preference number: 6 (lower is better)
Translates to: EKRRLPADGCFL*SPVAKIIWITC
Trigger: ACAAGTTATCCAAATTATTTTGGCCACAGGACTCAAAAGGAAGCATCCATCAGCTGGGAGTCTTCTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CAA 90 bp ATGCCTTCCTCTGACCATACCGCTGATCCTTCCCAAACATTCATTTaGATGTTATCTAATGCAGGACATTGTCTGATATCATTTGTCCAG +
Preference number: 6 (lower is better)
Translates to: MPSSDHTADPSQTFI*MLSNAGHCLISFVQ
Trigger: CTGGACAAATGATATCAGACAATGTCCTGCATTAGATAACATCAAAATGAATGTTTGGGAAGGATCAGCGGTATGGTCAGAGGAAGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS TCA 72 bp GTGCAGGAATTACCTAGACATGTAACACACTTCAGTTaGAGGATAAGGTTTGTCCTCTTCCATCTATTGATG +
Preference number: 6 (lower is better)
Translates to: VQELPRHVTHFS*RIRFVLFHLLM
Trigger: CATCAATAGATGGAAGAGGACAAACCTTATCCTTCAACTGAAGTGTGTTACATGTCTAGGTAATTCCTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515827.1
CDS GCA 72 bp TTAAAAGATAAGATCACCATGTGTACACAAAACAAATaGATCATCCTAACCCTGGGTGTAGCTGCTGAACAG +
Preference number: 6 (lower is better)
Translates to: LKDKITMCTQNK*IILTLGVAAEQ
Trigger: CTGTTCAGCAGCTACACCCAGGGTTAGGATGATGCATTTGTTTTGTGTACACATGGTGATCTTATCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS CCA 72 bp GCAGATCACTGTGTGCTTCAAACATTGTTTATTGGATaGACATTCCCAAAGATCTCTCTCTTTACAACCACA +
Preference number: 6 (lower is better)
Translates to: ADHCVLQTLFIG*TFPKISLFTTT
Trigger: TGTGGTTGTAAAGAGAGAGATCTTTGGGAATGTCCATCCAATAAACAATGTTTGAAGCACACAGTGATCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CCA 72 bp CATCGCAGATCACTGTGTGCTTCAAACATTGTTTATTaGATGGACATTCCCAAAGATCTCTCTCTTTACAAC +
Preference number: 6 (lower is better)
Translates to: HRRSLCASNIVY*MDIPKDLSLYN
Trigger: GTTGTAAAGAGAGAGATCTTTGGGAATGTCCATCCAATAAACAATGTTTGAAGCACACAGTGATCTGCGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000504584.1
ENST00000505754.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CCA 72 bp GCAGATCACTGTGTGCTTCAAACATTGTTTATTGGATaGACATTCCCAAAGATCTCTCTCTTTACAACCTTC +
Preference number: 6 (lower is better)
Translates to: ADHCVLQTLFIG*TFPKISLFTTF
Trigger: GAAGGTTGTAAAGAGAGAGATCTTTGGGAATGTCCATCCAATAAACAATGTTTGAAGCACACAGTGATCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505754.1
CDS CAA 72 bp CCTTTTGAGTCCTGTGGCCAAAATAATTTGGATAACTaGTACTGTTGTAGGGCAAATTCATGCAGAGTTCCA +
Preference number: 6 (lower is better)
Translates to: PFESCGQNNLDN*YCCRANSCRVP
Trigger: TGGAACTCTGCATGAATTTGCCCTACAACAGTACAAGTTATCCAAATTATTTTGGCCACAGGACTCAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS TCA 72 bp GATGTAAATCTGTCTTTTAATCCATTCGACGAAATATaGCACATTACTATAAACGCCAGGCCCCAGGACTTT +
Preference number: 6 (lower is better)
Translates to: DVNLSFNPFDEI*HITINARPQDF
Trigger: AAAGTCCTGGGGCCTGGCGTTTATAGTAATGTGTCATATTTCGTCGAATGGATTAAAAGACAGATTTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4
CDS CAA 72 bp GTTATAAATTGTATTTGTAAGAATAACATCGGACCCTaGGATTTCACCATCAGTGACCAAAGGTTCACTCCC +
Preference number: 6 (lower is better)
Translates to: VINCICKNNIGP*DFTISDQRFTP
Trigger: GGGAGTGAACCTTTGGTCACTGATGGTGAAATCCAAGGGTCCGATGTTATTCTTACAAATACAATTTATAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502726.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000510974.1
CDS CAA 72 bp TCTGACCATACCGCTGATCCTTCCCAAACATTCATTTaGATGTTATCTAATGCAGGACATTGTCTGATATCA +
Preference number: 6 (lower is better)
Translates to: SDHTADPSQTFI*MLSNAGHCLIS
Trigger: TGATATCAGACAATGTCCTGCATTAGATAACATCAAAATGAATGTTTGGGAAGGATCAGCGGTATGGTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS TCA 72 bp TCAAATAGAGAAGTAGCTTCGTGGGGAAATTTTCTGTaGGTTGGAAATAACACACATAGATCAGCACTATCA +
Preference number: 6 (lower is better)
Translates to: SNREVASWGNFL*VGNNTHRSALS
Trigger: TGATAGTGCTGATCTATGTGTGTTATTTCCAACTCACAGAAAATTTCCCCACGAAGCTACTTCTCTATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504584.1
ENST00000505754.1
CDS GCA 72 bp ATGCAATATCTAACAGATGAGTGCCAAATTCTTCAATaGAATCAAGTTCACAAATTCACTCACCTAAGCAGC +
Preference number: 6 (lower is better)
Translates to: MQYLTDECQILQ*NQVHKFTHLSS
Trigger: GCTGCTTAGGTGAGTGAATTTGTGAACTTGATTGCATTGAAGAATTTGGCACTCATCTGTTAGATATTGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503821.5
CDS GCA 72 bp AGGGAAGGGTTGAATCTGATGATCTCCAAGGCCTCCTaGAACTATAATTTCTGTGATCTATATAATTACAAT +
Preference number: 6 (lower is better)
Translates to: REGLNLMISKAS*NYNFCDLYNYN
Trigger: ATTGTAATTATATAGATCACAGAAATTATAGTTGCAGGAGGCCTTGGAGATCATCAGATTCAACCCTTCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502726.5
CDS CCA 72 bp GTTGTAGGGCAAATTCATGCAGAGTTCCAATGTAATTaGTTCACATTGACTACAGTTATTCAGACTGTTGTT +
Preference number: 6 (lower is better)
Translates to: VVGQIHAEFQCN*FTLTTVIQTVV
Trigger: AACAACAGTCTGAATAACTGTAGTCAATGTGAACCAATTACATTGGAACTCTGCATGAATTTGCCCTACAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273857.9
ENST00000502252.5
ENST00000503821.5
ENST00000504584.1
ENST00000505909.5
ENST00000508498.5
ENST00000610355.4