RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COQ9 (Homo sapiens)

Ensembl gene IDs: ENSG00000088682

Ensembl transcript IDs: ENST00000262507.11, ENST00000562426.5, ENST00000562734.5, ENST00000563166.1, ENST00000563391.1, ENST00000564115.5, ENST00000564655.5, ENST00000565964.5, ENST00000566388.5, ENST00000567072.5, ENST00000567384.1, ENST00000567480.1, ENST00000567576.1, ENST00000567933.5, ENST00000568790.5, ENST00000569980.1

Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGTaGGGCAGTTTTCTGAGGGGGCTCCCAGGAACAGCATCTCAGGAC +
Preference number: 1 (lower is better)
Translates to: PGLESHLCPAGTCLR*GSFLRGLPGTASQD
Trigger: GTCCTGAGATGCTGTTCCTGGGAGCCCCCTCAGAAAACTGCCTCACCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR TCA 90 bp TGCAGTGCAGAAAGGCATCAGGAGGCTTGGTCTGGTATTAGGAACTaGAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAAATGC +
Preference number: 1 (lower is better)
Translates to: CSAERHQEAWSGIRN*RSSPIPDQNGSIKC
Trigger: GCATTTGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACCAAGCCTCCTGATGCCTTTCTGCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
3UTR GCA 90 bp CTCTCCTGTGGACTTTACCTGCTTGGCAGTGTGGCCCATGTTCATTaGATCATTAACCCGGTTTTCCAGGAAGCGCCAAGTGTCCTCAAA +
Preference number: 1 (lower is better)
Translates to: LSCGLYLLGSVAHVH*IINPVFQEAPSVLK
Trigger: TTTGAGGACACTTGGCGCTTCCTGGAAAACCGGGTTAATGATGCAATGAACATGGGCCACACTGCCAAGCAGGTAAAGTCCACAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
3UTR TCA 90 bp CAGGTGGCTGTGGTAGTGACTCAGGAGTCCTTTAGTGTGTTCTCGTaGACACCAGGTTATGTGGATGGCACCTTATACTTTTCAAAGCTC +
Preference number: 1 (lower is better)
Translates to: QVAVVVTQESFSVFS*TPGYVDGTLYFSKL
Trigger: GAGCTTTGAAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGGACTCCTGAGTCACTACCACAGCCACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
3UTR GCA 90 bp TGGCTTGACTGCTTGGATGAACATCTCATTTTTCAATCACACAGTTaGAGTGCAGAAAGGCATCAGGAGGCTTGGTCTGGTATTAGGAAC +
Preference number: 1 (lower is better)
Translates to: WLDCLDEHLIFQSHS*SAERHQEAWSGIRN
Trigger: GTTCCTAATACCAGACCAAGCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGATGTTCATCCAAGCAGTCAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR-3UTR TCA 90 bp TTGTCTCAGGTGAGGCAGTTTTCTGAGGGGGCTCCCAGGAACAGCATCTCAGGAGGTGGCGTCAGACCTTaGCTCTGGCTTGGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: LSQVRQFSEGAPRNSISGGGVRP*LWLGSP
Trigger: GGGGCTCCCAAGCCAGAGTCAAGGTCTGACGCCACC...TCCTGAGATGCTGTTCCTGGGAGCCCCCTCAGAAAACTGCCTCACCTGAGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR CAA 90 bp TCATGTGACACCAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTaGTCTCAGGTGAGGCAGTTTTCTGAGGGGGCTCCCAGGAACAGC +
Preference number: 2 (lower is better)
Translates to: SCDTRPGITPLSSRH*SQVRQFSEGAPRNS
Trigger: GCTGTTCCTGGGAGCCCCCTCAGAAAACTGCCTCACCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTGGTGTCACATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR-3UTR TCA 90 bp CAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGTGAGGCAGTTGTGCTGTGCTGGAGATaGGCTGTCACCTTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: QAWNHTSVQQALVSGEAVVLCWR*AVTLRW
Trigger: CCACCTCAAGGTGACAGCTCATCTCCAGCACAGCAC...AACTGCCTCACCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR CAA 90 bp TGTCCTCAAAGTCTGGAGAGGAGTCCTGCATCATCACCAGCTCTGTaGTGTTGTAGATGGCAGCCAGCATGGCTCGGCGGGTGTACCAGT +
Preference number: 2 (lower is better)
Translates to: CPQSLERSPASSPAL*CCRWQPAWLGGCTS
Trigger: ACTGGTACACCCGCCGAGCCATGCTGGCTGCCATCTACAACACAACAGAGCTGGTGATGATGCAGGACTCCTCTCCAGACTTTGAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564115.5
3UTR-3UTR TCA 90 bp CATGTGACACCAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGGTGCCCATGAGATTGTaGCAGGGACATGCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: HVTPGLESHLCPAGTCLRVPMRL*QGHAGF
Trigger: AAACCCAGCATGTCCCTGTCACAATCTCATGGGCAC...CCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTGGTGTCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR-3UTR CCA 90 bp ATTAACCCGGTTTTCCAGGAAGCGCCAAGTGTCCTCAAAGTCTGGAGAGGAGTCAGATGGCAGCCAGCATaGCTCGGCGGGTGTACCAGT +
Preference number: 2 (lower is better)
Translates to: INPVFQEAPSVLKVWRGVRWQPA*LGGCTS
Trigger: ACTGGTACACCCGCCGAGCCATGCTGGCTGCCATCT...GACTCCTCTCCAGACTTTGAGGACACTTGGCGCTTCCTGGAAAACCGGGTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
3UTR-3UTR CCA 90 bp CATGTGACACCAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGGCATCAAATGCCTTGTaGTTTCCAGGTGGCTGTGGT +
Preference number: 2 (lower is better)
Translates to: HVTPGLESHLCPAGTCLRASNAL*FPGGCG
Trigger: ACCACAGCCACCTGGAAACCACAAGGCATTTGATGC...CCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTGGTGTCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR-3UTR CCA 90 bp CAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGTGAGGCAGTTCATGCTGGGTTTCTGTaGCTTGACTGCTTGGATGAA +
Preference number: 2 (lower is better)
Translates to: QAWNHTSVQQALVSGEAVHAGFL*LDCLDE
Trigger: TTCATCCAAGCAGTCAAGCCACAGAAACCCAGCATG...AACTGCCTCACCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR-3UTR GCA 90 bp TTGTCTCAGGTGAGGCAGTTTTCTGAGGGGGCTCCCAGGAACAGCATCTCAGGAAACGGTAGCATCAAATaGCTTGTGGTTTCCAGGTGG +
Preference number: 2 (lower is better)
Translates to: LSQVRQFSEGAPRNSISGNGSIK*LVVSRW
Trigger: CCACCTGGAAACCACAAGGCATTTGATGCTACCGTT...TCCTGAGATGCTGTTCCTGGGAGCCCCCTCAGAAAACTGCCTCACCTGAGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR-3UTR CCA 90 bp CATGAGTCCTTGCACCAGTGCCTCTCCTGTGGACTTTACCTGCTTGGCAGTGTGAGTGTCCTCAAAGTCTaGAGAGGAGTCCTGCATCAT +
Preference number: 2 (lower is better)
Translates to: HESLHQCLSCGLYLLGSVSVLKV*RGVLHH
Trigger: ATGATGCAGGACTCCTCTCCAGACTTTGAGGACACT...CACACTGCCAAGCAGGTAAAGTCCACAGGAGAGGCACTGGTGCAAGGACTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564115.5
3UTR-3UTR GCA 90 bp TTGTCTCAGGTGAGGCAGTTTTCTGAGGGGGCTCCCAGGAACAGCATCTCAGGATTTCTGTGGCTTGACTaGTTGGATGAACATCTCATT +
Preference number: 2 (lower is better)
Translates to: LSQVRQFSEGAPRNSISGFLWLD*LDEHLI
Trigger: AATGAGATGTTCATCCAAGCAGTCAAGCCACAGAAA...TCCTGAGATGCTGTTCCTGGGAGCCCCCTCAGAAAACTGCCTCACCTGAGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR-3UTR GCA 90 bp AGACATGATCAAGGTGCCCATGAGATTGTGACAGGGACATGCTGGGTTTCTGTGTTTCAATCACACAGTTaGAGTGCAGAAAGGCATCAG +
Preference number: 2 (lower is better)
Translates to: RHDQGAHEIVTGTCWVSVFQSHS*SAERHQ
Trigger: CTGATGCCTTTCTGCACTGCAACTGTGTGATTGAAA...CACAGAAACCCAGCATGTCCCTGTCACAATCTCATGGGCACCTTGATCATGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR-3UTR CCA 90 bp AGGCTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGAACACCAGGTTATGTaGATGGCACCTTATACTTTT +
Preference number: 2 (lower is better)
Translates to: RLGLVLGTEEAAQSLTRTEHQVM*MAPYTF
Trigger: AAAAGTATAAGGTGCCATCCACATAACCTGGTGTTC...CGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACCAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
3UTR-3UTR CCA 90 bp CAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGAACACCAGGTTATGTaGATGGCACCTTATACTTTT +
Preference number: 2 (lower is better)
Translates to: QSLTRTVASNALWFPGGCEHQVM*MAPYTF
Trigger: AAAAGTATAAGGTGCCATCCACATAACCTGGTGTTC...ACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
3UTR-3UTR GCA 90 bp TTACAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACAGGAACACCTCTGTGTaGACACGCCTGTGCTGTGCT +
Preference number: 2 (lower is better)
Translates to: LQTQNTLIILQCMLVSCDRNTSV*TRLCCA
Trigger: AGCACAGCACAGGCGTGTGCACACAGAGGTGTTCCT...GTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262507.11
3UTR-3UTR CCA 90 bp GTGCAGAAAGGCATCAGGAGGCTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCACCAGGTTATGTGGATaGCACCTTATACTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: VQKGIRRLGLVLGTEEAATRLCG*HLILFK
Trigger: TTTGAAAAGTATAAGGTGCCATCCACATAACCTGGT...GGCTGCTTCTTCAGTTCCTAATACCAGACCAAGCCTCCTGATGCCTTTCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
3UTR-3UTR TCA 90 bp TTCAATCACACAGTTGCAGTGCAGAAAGGCATCAGGAGGCTTGGTCTGGTATTATTTAGTGTGTTCTCGTaGACACCAGGTTATGTGGAT +
Preference number: 2 (lower is better)
Translates to: FNHTVAVQKGIRRLGLVLFSVFS*TPGYVD
Trigger: ATCCACATAACCTGGTGTTCACGAGAACACACTAAA...TAATACCAGACCAAGCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR-3UTR TCA 90 bp CATGCTGGGTTTCTGTGGCTTGACTGCTTGGATGAACATCTCATTTTTCAATCATCTGGTATTAGGAACTaGAGAAGCAGCCCAATCCCT +
Preference number: 2 (lower is better)
Translates to: HAGFLWLDCLDEHLIFQSSGIRN*RSSPIP
Trigger: AGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGA...TGATTGAAAAATGAGATGTTCATCCAAGCAGTCAAGCCACAGAAACCCAGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR-3UTR TCA 90 bp CATGCTGGGTTTCTGTGGCTTGACTGCTTGGATGAACATCTCATTTTTCAATCATTTAGTGTGTTCTCGTaGACACCAGGTTATGTGGAT +
Preference number: 2 (lower is better)
Translates to: HAGFLWLDCLDEHLIFQSFSVFS*TPGYVD
Trigger: ATCCACATAACCTGGTGTTCACGAGAACACACTAAA...TGATTGAAAAATGAGATGTTCATCCAAGCAGTCAAGCCACAGAAACCCAGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR-3UTR CCA 90 bp GTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAAATACCAGGTTATGTGGATaGCACCTTATACTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: VLGTEEAAQSLTRTVASNTRLCG*HLILFK
Trigger: TTTGAAAAGTATAAGGTGCCATCCACATAACCTGGT...ATTTGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
3UTR TCA 72 bp CTGAGGGGGCTCCCAGGAACAGCATCTCAGGACACCTaGGAGGGAGGGGGCTGCAAGGAACACCTCTGTGTG +
Preference number: 3 (lower is better)
Translates to: LRGLPGTASQDT*EGGGCKEHLCV
Trigger: CACACAGAGGTGTTCCTTGCAGCCCCCTCCCTCTCAGGTGTCCTGAGATGCTGTTCCTGGGAGCCCCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR GCA 72 bp CCTGAGAGGGAGGGGGCTGCAAGGAACACCTCTGTGTaGACACGCCTGTGCTGTGCTGGAGATGAGCTGTCA +
Preference number: 3 (lower is better)
Translates to: PEREGAARNTSV*TRLCCAGDELS
Trigger: TGACAGCTCATCTCCAGCACAGCACAGGCGTGTGCACACAGAGGTGTTCCTTGCAGCCCCCTCCCTCTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR TCA 72 bp GAAAGGCATCAGGAGGCTTGGTCTGGTATTAGGAACTaGAGAAGCAGCCCAATCCCTGACCAGAACGGTAGC +
Preference number: 3 (lower is better)
Translates to: ERHQEAWSGIRN*RSSPIPDQNGS
Trigger: GCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACCAAGCCTCCTGATGCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
3UTR CCA 72 bp CAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTaGTTTCCAGGTGGCTGTGGTAGTGACTCAGGAGTC +
Preference number: 3 (lower is better)
Translates to: QSLTRTVASNAL*FPGGCGSDSGV
Trigger: GACTCCTGAGTCACTACCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
3UTR-3UTR CAA 90 bp CATGTGACACCAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGTTTTCAATCACACAGTaGCAGTGCAGAAAGGCATCA +
Preference number: 3 (lower is better)
Translates to: HVTPGLESHLCPAGTCLRFSITQ*QCRKAS
Trigger: TGATGCCTTTCTGCACTGCAACTGTGTGATTGAAAA...CCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTGGTGTCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR GCA 72 bp GGACTTTACCTGCTTGGCAGTGTGGCCCATGTTCATTaGATCATTAACCCGGTTTTCCAGGAAGCGCCAAGT +
Preference number: 3 (lower is better)
Translates to: GLYLLGSVAHVH*IINPVFQEAPS
Trigger: ACTTGGCGCTTCCTGGAAAACCGGGTTAATGATGCAATGAACATGGGCCACACTGCCAAGCAGGTAAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
3UTR TCA 72 bp GTGGTAGTGACTCAGGAGTCCTTTAGTGTGTTCTCGTaGACACCAGGTTATGTGGATGGCACCTTATACTTT +
Preference number: 3 (lower is better)
Translates to: VVVTQESFSVFS*TPGYVDGTLYF
Trigger: AAAGTATAAGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGGACTCCTGAGTCACTACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
3UTR GCA 72 bp TGCTTGGATGAACATCTCATTTTTCAATCACACAGTTaGAGTGCAGAAAGGCATCAGGAGGCTTGGTCTGGT +
Preference number: 3 (lower is better)
Translates to: CLDEHLIFQSHS*SAERHQEAWSG
Trigger: ACCAGACCAAGCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGATGTTCATCCAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp TCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGTGGCAGGCATCGCAGCTaGAGGAGCCTCCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SLTRTVASNALWFPGGCGGRHRS*RSLQPA
Trigger: GGCGGGCTGGAGGCTCCTGCAGCTGCGATGCCTGCC...ACCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR TCA 90 bp ATGGCAGCCAGCATGGCTCGGCGGGTGTACCAGTTAAAATCAGTGGACTGGTCCCATCCACCATGCTGGTaGGCAGGCTCAGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: MAASMARRVYQLKSVDWSHPPCW*AGSGWT
Trigger: CGTCCAGCCTGAGCCTGCTCACCAGCATGGTGGATG...GGACCAGTCCACTGATTTTAACTGGTACACCCGCCGAGCCATGCTGGCTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp GGCAGCCAGCATGGCTCGGCGGGTGTACCAGTTAAAATCAGTGGACTGGTCCCCGCCGTCAGGATGCGGTaGTGCAACTGCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: GSQHGSAGVPVKISGLVPAVRMR*CNCSSL
Trigger: AAGTGAGGAGCAGTTGCAGCACCGCATCCTGACGGC...GGGGACCAGTCCACTGATTTTAACTGGTACACCCGCCGAGCCATGCTGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp GCACCCATGAGTCCTTGCACCAGTGCCTCTCCTGTGGACTTTACCTGCTTGGCAGGGCTGCCGTCAGGATaGGGTGCTGCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: APMSPCTSASPVDFTCLAGLPSG*GAATAP
Trigger: AGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCC...TGCCAAGCAGGTAAAGTCCACAGGAGAGGCACTGGTGCAAGGACTCATGGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp GCAGCCAGCATGGCTCGGCGGGTGTACCAGTTAAAATCAGTGGACTGGTCCCCACCCGAACATGCTGGCTaGTGCACTGGAGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: AASMARRVYQLKSVDWSPPEHAG*CTGETQ
Trigger: CTGGGTCTCTCCAGTGCAGCAGCCAGCATGTTCGGG...TGGGGACCAGTCCACTGATTTTAACTGGTACACCCGCCGAGCCATGCTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp TGCATCATTAACCCGGTTTTCCAGGAAGCGCCAAGTGTCCTCAAAGTCTGGAGAGGCAGGCATCGCAGCTaGAGGAGCCTCCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: CIINPVFQEAPSVLKVWRGRHRS*RSLQPA
Trigger: GGCGGGCTGGAGGCTCCTGCAGCTGCGATGCCTGCC...TCTCCAGACTTTGAGGACACTTGGCGCTTCCTGGAAAACCGGGTTAATGATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp CTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAGGCAGGCATCGCAGCTaGAGGAGCCTCCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LVLGTEEAAQSLTRTVASGRHRS*RSLQPA
Trigger: GGCGGGCTGGAGGCTCCTGCAGCTGCGATGCCTGCC...TGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp ATGGCAGCCAGCATGGCTCGGCGGGTGTACCAGTTAAAATCAGTGGACTGGTCCTCTGCTGTCCACCCGTaGGCGGGCACAAACTCAAGG +
Preference number: 4 (lower is better)
Translates to: MAASMARRVYQLKSVDWSSAVHP*AGTNSR
Trigger: CCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGA...GGACCAGTCCACTGATTTTAACTGGTACACCCGCCGAGCCATGCTGGCTGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR CCA 90 bp CAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGTGAGGCAGTTAGATGGCAGCCAGCATaGCTCGGCGGGTGTACCAGT +
Preference number: 4 (lower is better)
Translates to: QAWNHTSVQQALVSGEAVRWQPA*LGGCTS
Trigger: ACTGGTACACCCGCCGAGCCATGCTGGCTGCCATCT...AACTGCCTCACCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp GGCAGCCAGCATGGCTCGGCGGGTGTACCAGTTAAAATCAGTGGACTGGTCCCCCCAGTGCCTCTCCTGTaGACTTTACCTGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GSQHGSAGVPVKISGLVPPVPLL*TLPAWQ
Trigger: CTGCCAAGCAGGTAAAGTCCACAGGAGAGGCACTGG...GGGGACCAGTCCACTGATTTTAACTGGTACACCCGCCGAGCCATGCTGGCTGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR CCA 90 bp CATGAGTCCTTGCACCAGTGCCTCTCCTGTGGACTTTACCTGCTTGGCAGTGTGGCTGAGGGCTCCGCCTaGCCCAACTGTACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HESLHQCLSCGLYLLGSVAEGSA*PNCTSF
Trigger: GAAGCTGGTACAGTTGGGCCAGGCGGAGCCCTCAGC...CACACTGCCAAGCAGGTAAAGTCCACAGGAGAGGCACTGGTGCAAGGACTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR TCA 90 bp CATGTGACACCAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGTCACTGCTGCACCCATaGGTCCTTGCACCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: HVTPGLESHLCPAGTCLRSLLHP*VLAPVP
Trigger: AGGCACTGGTGCAAGGACTCATGGGTGCAGCAGTGA...CCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTGGTGTCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp GGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCAGGTGGCGTCAGACCTTaGCTCTGGCTTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GLVLGTEEAAQSLTRTVAGGVRP*LWLGSP
Trigger: GGGGCTCCCAAGCCAGAGTCAAGGTCTGACGCCACC...TGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp TCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGTGGGCTGCCGTCAGGATaGGGTGCTGCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLTRTVASNALWFPGGCGGLPSG*GAATAP
Trigger: AGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCC...ACCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp CCAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGCCCACAGCTGAAGCATaGAAGGCACGCGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: PIPDQNGSIKCLVVSRWLPTAEA*KARGTR
Trigger: CCTGGTGCCGCGTGCCTTCCATGCTTCAGCTGTGGG...CAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
3UTR CAA 72 bp AGTCTGGAGAGGAGTCCTGCATCATCACCAGCTCTGTaGTGTTGTAGATGGCAGCCAGCATGGCTCGGCGGG +
Preference number: 4 (lower is better)
Translates to: SLERSPASSPAL*CCRWQPAWLGG
Trigger: CCCGCCGAGCCATGCTGGCTGCCATCTACAACACAACAGAGCTGGTGATGATGCAGGACTCCTCTCCAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR TCA 90 bp CATGAGTCCTTGCACCAGTGCCTCTCCTGTGGACTTTACCTGCTTGGCAGTGTGCTTCTAGCACACGTGTaGGCCGGGTATTGCACTGGG +
Preference number: 4 (lower is better)
Translates to: HESLHQCLSCGLYLLGSVLLAHV*AGYCTG
Trigger: CCCAGTGCAATACCCGGCTCACACGTGTGCTAGAAG...CACACTGCCAAGCAGGTAAAGTCCACAGGAGAGGCACTGGTGCAAGGACTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp GGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCAGGGCTGCCGTCAGGATaGGGTGCTGCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLVLGTEEAAQSLTRTVAGLPSG*GAATAP
Trigger: AGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCC...TGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CATCATCACCAGCTCTGTTGTGTTGTAGATGGCAGCCAGCATGGCTCGGCGGGTGAACATGCTGGCTGCTaGACTGGAGAGACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: HHHQLCCVVDGSQHGSAGEHAGC*TGETQR
Trigger: TCTCTGGGTCTCTCCAGTGCAGCAGCCAGCATGTTC...ACCCGCCGAGCCATGCTGGCTGCCATCTACAACACAACAGAGCTGGTGATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp CATGTGACACCAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGGAACATGCTGGCTGCTaGACTGGAGAGACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: HVTPGLESHLCPAGTCLREHAGC*TGETQR
Trigger: TCTCTGGGTCTCTCCAGTGCAGCAGCCAGCATGTTC...CCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTGGTGTCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp ATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGCCCGAACATGCTGGCTaGTGCACTGGAGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: IPDQNGSIKCLVVSRWLWPEHAG*CTGETQ
Trigger: CTGGGTCTCTCCAGTGCAGCAGCCAGCATGTTCGGG...CCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp CATGTGACACCAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGAGGAACACCTCTGTGTaGACACGCCTGTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: HVTPGLESHLCPAGTCLRRNTSV*TRLCCA
Trigger: AGCACAGCACAGGCGTGTGCACACAGAGGTGTTCCT...CCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTGGTGTCACATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp TCATTAACCCGGTTTTCCAGGAAGCGCCAAGTGTCCTCAAAGTCTGGAGAGGAGCCCACAGCTGAAGCATaGAAGGCACGCGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: SLTRFSRKRQVSSKSGEEPTAEA*KARGTR
Trigger: CCTGGTGCCGCGTGCCTTCCATGCTTCAGCTGTGGG...CTCCTCTCCAGACTTTGAGGACACTTGGCGCTTCCTGGAAAACCGGGTTAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR CCA 90 bp ATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGTGCTGGCTGCTGCACTaGAGAGACCCAGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: IPDQNGSIKCLVVSRWLWCWLLH*RDPETG
Trigger: CCCAGTCTCTGGGTCTCTCCAGTGCAGCAGCCAGCA...CCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp CATCATCACCAGCTCTGTTGTGTTGTAGATGGCAGCCAGCATGGCTCGGCGGGTGAGTTGGGAGGCTGCTaGTTCTGCTCATCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: HHHQLCCVVDGSQHGSAGELGGC*FCSSED
Trigger: GTCTTCAGATGAGCAGAAGCAGCAGCCTCCCAACTC...ACCCGCCGAGCCATGCTGGCTGCCATCTACAACACAACAGAGCTGGTGATGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp ATGGCAGCCAGCATGGCTCGGCGGGTGTACCAGTTAAAATCAGTGGACTGGTCCGTCAGGATGCGGTGCTaGAACTGCTCCTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: MAASMARRVYQLKSVDWSVRMRC*NCSSLS
Trigger: TGAAAGTGAGGAGCAGTTGCAGCACCGCATCCTGAC...GGACCAGTCCACTGATTTTAACTGGTACACCCGCCGAGCCATGCTGGCTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp CTCAGGAGTCCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTTTCTGCAATCGCCTCTaGTGTCCACCCGTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LRSPLVCSREHQVMWMAPFCNRL*CPPVGG
Trigger: CCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAA...AGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGGACTCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp AATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTGGACCGCCGCCGCCATTTTaGAAGCGGGCACGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: NTLIILQCMLVSCDTRPGPPPPF*KRARRP
Trigger: TGGGCGACGTGCCCGCTTCCAAAATGGCGGCGGCGG...TCCAGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262507.11
CDS-3UTR CCA 90 bp TGTGTTGTAGATGGCAGCCAGCATGGCTCGGCGGGTGTACCAGTTAAAATCAGTTGCTGGCTGCTGCACTaGAGAGACCCAGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: CVVDGSQHGSAGVPVKISCWLLH*RDPETG
Trigger: CCCAGTCTCTGGGTCTCTCCAGTGCAGCAGCCAGCA...ACTGATTTTAACTGGTACACCCGCCGAGCCATGCTGGCTGCCATCTACAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR TCA 90 bp GGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCAGTGCTGTGCTGGAGATaGGCTGTCACCTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GLVLGTEEAAQSLTRTVAVLCWR*AVTLRW
Trigger: CCACCTCAAGGTGACAGCTCATCTCCAGCACAGCAC...TGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp CATGCTGGGTTTCTGTGGCTTGACTGCTTGGATGAACATCTCATTTTTCAATCAGGCAGGCATCGCAGCTaGAGGAGCCTCCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: HAGFLWLDCLDEHLIFQSGRHRS*RSLQPA
Trigger: GGCGGGCTGGAGGCTCCTGCAGCTGCGATGCCTGCC...TGATTGAAAAATGAGATGTTCATCCAAGCAGTCAAGCCACAGAAACCCAGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp TTGTCTCAGGTGAGGCAGTTTTCTGAGGGGGCTCCCAGGAACAGCATCTCAGGAGAGTTGGGAGGCTGCTaGTTCTGCTCATCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LSQVRQFSEGAPRNSISGELGGC*FCSSED
Trigger: GTCTTCAGATGAGCAGAAGCAGCAGCCTCCCAACTC...TCCTGAGATGCTGTTCCTGGGAGCCCCCTCAGAAAACTGCCTCACCTGAGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp GGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCAGCCGTCAGGATGCGGTaGTGCAACTGCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: GLVLGTEEAAQSLTRTVAAVRMR*CNCSSL
Trigger: AAGTGAGGAGCAGTTGCAGCACCGCATCCTGACGGC...TGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp GTGGCCCATGTTCATTGCATCATTAACCCGGTTTTCCAGGAAGCGCCAAGTGTCCACAAACTCAAGGGCTaGCGTCAGGATGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VAHVHCIINPVFQEAPSVHKLKG*RQDAVL
Trigger: CAGCACCGCATCCTGACGGCAGCCCTTGAGTTTGTG...GACACTTGGCGCTTCCTGGAAAACCGGGTTAATGATGCAATGAACATGGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp GACTTTACCTGCTTGGCAGTGTGGCCCATGTTCATTGCATCATTAACCCGGTTTTTCTGCAATCGCCTCTaGTGTCCACCCGTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: DFTCLAVWPMFIASLTRFFCNRL*CPPVGG
Trigger: CCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAA...AAACCGGGTTAATGATGCAATGAACATGGGCCACACTGCCAAGCAGGTAAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp ATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGCATCCTTCCCGAACATaGTGGCTGCTGCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: IPDQNGSIKCLVVSRWLWHPSRT*WLLHWR
Trigger: TCTCCAGTGCAGCAGCCAGCATGTTCGGGAAGGATG...CCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp ATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGCCTGTGGACTTTACCTaGTTGGCAGTGTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: IPDQNGSIKCLVVSRWLWPVDFT*LAVWPM
Trigger: CATGGGCCACACTGCCAAGCAGGTAAAGTCCACAGG...CCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CATGTGACACCAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGATCACACAGTTGCAGTaGAGAAAGGCATCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HVTPGLESHLCPAGTCLRITQLQ*RKASGG
Trigger: GCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGAT...CCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTGGTGTCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp CTCAGGAGTCCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTTCTGCTGTCCACCCGTaGGCGGGCACAAACTCAAGG +
Preference number: 4 (lower is better)
Translates to: LRSPLVCSREHQVMWMAPSAVHP*AGTNSR
Trigger: CCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGA...AGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGGACTCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp GAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTTCTGCTGTCCACCCGTaGGCGGGCACAAACTCAAGG +
Preference number: 4 (lower is better)
Translates to: EEAAQSLTRTVASNALWFSAVHP*AGTNSR
Trigger: CCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGA...AAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp AGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGTAGTGACTCAAGATGGCAGCCAGCATaGCTCGGCGGGTGTACCAGT +
Preference number: 4 (lower is better)
Translates to: RTVASNALWFPGGCGSDSRWQPA*LGGCTS
Trigger: ACTGGTACACCCGCCGAGCCATGCTGGCTGCCATCT...TGAGTCACTACCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp GCACCCATGAGTCCTTGCACCAGTGCCTCTCCTGTGGACTTTACCTGCTTGGCAACCTGCTTGGCAGTGTaGCCCATGTTCATTGCATCA +
Preference number: 4 (lower is better)
Translates to: APMSPCTSASPVDFTCLATCLAV*PMFIAS
Trigger: TGATGCAATGAACATGGGCCACACTGCCAAGCAGGT...TGCCAAGCAGGTAAAGTCCACAGGAGAGGCACTGGTGCAAGGACTCATGGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR CCA 90 bp CCAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGCCAGTGCCTCTCCTGTaGACTTTACCTGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PIPDQNGSIKCLVVSRWLPVPLL*TLPAWQ
Trigger: CTGCCAAGCAGGTAAAGTCCACAGGAGAGGCACTGG...CAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp CATGTGACACCAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGTCCTCTCACCGACGCTaGTTTAGACCTGTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: HVTPGLESHLCPAGTCLRSSHRR*FRPVKF
Trigger: GAACTTGACAGGTCTAAACCAGCGTCGGTGAGAGGA...CCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTGGTGTCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
3UTR CAA 72 bp GCCCAATCCCTGACCAGAACGGTAGCATCAAATGCCTaGTGGTTTCCAGGTGGCTGTGGTAGTGACTCAGGA +
Preference number: 4 (lower is better)
Translates to: AQSLTRTVASNA*WFPGGCGSDSG
Trigger: TCCTGAGTCACTACCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR TCA 90 bp CGGTTTTCCAGGAAGCGCCAAGTGTCCTCAAAGTCTGGAGAGGAGTCCTGCATCATGCTGCTGAGAAAATaGGTTGGGAGGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RFSRKRQVSSKSGEESCIMLLRK*VGRLLL
Trigger: AAGCAGCAGCCTCCCAACTCATTTTCTCAGCAGCAT...GATGCAGGACTCCTCTCCAGACTTTGAGGACACTTGGCGCTTCCTGGAAAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR TCA 90 bp CTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCACTTCTAGCACACGTGTaGGCCGGGTATTGCACTGGG +
Preference number: 4 (lower is better)
Translates to: LVLGTEEAAQSLTRTVASLLAHV*AGYCTG
Trigger: CCCAGTGCAATACCCGGCTCACACGTGTGCTAGAAG...TGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp TGCTTGGCAGTGTGGCCCATGTTCATTGCATCATTAACCCGGTTTTCCAGGAAGCTGGACGGGATGTTGTaGGGGAGCATGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: CLAVWPMFIASLTRFSRKLDGML*GSMRML
Trigger: CAGCATCCTCATGCTCCCTCACAACATCCCGTCCAG...CTTCCTGGAAAACCGGGTTAATGATGCAATGAACATGGGCCACACTGCCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR TCA 90 bp CTCAGGAGTCCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTCTGGACGGGATGTTGTaGGGGAGCATGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: LRSPLVCSREHQVMWMAPLDGML*GSMRML
Trigger: CAGCATCCTCATGCTCCCTCACAACATCCCGTCCAG...AGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGGACTCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp CTCAGGAGTCCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTTCACTGCTGCACCCATaGGTCCTTGCACCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: LRSPLVCSREHQVMWMAPSLLHP*VLAPVP
Trigger: AGGCACTGGTGCAAGGACTCATGGGTGCAGCAGTGA...AGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGGACTCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR TCA 90 bp CAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGTGAGGCAGTTTCTGGTATTAGGAACTaGAGAAGCAGCCCAATCCCT +
Preference number: 4 (lower is better)
Translates to: QAWNHTSVQQALVSGEAVSGIRN*RSSPIP
Trigger: AGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGA...AACTGCCTCACCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp CAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTGGTGGCGTCAGACCTTaGCTCTGGCTTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: QNTLIILQCMLVSCDTRPGGVRP*LWLGSP
Trigger: GGGGCTCCCAAGCCAGAGTCAAGGTCTGACGCCACC...AGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp CTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGTGCTGTGCTGGAGATaGGCTGTCACCTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGLVLGTEEAAQSLTRTVVLCWR*AVTLRW
Trigger: CCACCTCAAGGTGACAGCTCATCTCCAGCACAGCAC...TACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp CTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAGCCGTCAGGATGCGGTaGTGCAACTGCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: LVLGTEEAAQSLTRTVASAVRMR*CNCSSL
Trigger: AAGTGAGGAGCAGTTGCAGCACCGCATCCTGACGGC...TGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCACACAAACTCAAGGGCTaGCGTCAGGATGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LVLGTEEAAQSLTRTVASHKLKG*RQDAVL
Trigger: CAGCACCGCATCCTGACGGCAGCCCTTGAGTTTGTG...TGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp TCATTAACCCGGTTTTCCAGGAAGCGCCAAGTGTCCTCAAAGTCTGGAGAGGAGCATCCTTCCCGAACATaGTGGCTGCTGCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLTRFSRKRQVSSKSGEEHPSRT*WLLHWR
Trigger: TCTCCAGTGCAGCAGCCAGCATGTTCGGGAAGGATG...CTCCTCTCCAGACTTTGAGGACACTTGGCGCTTCCTGGAAAACCGGGTTAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp GTGCAGAAAGGCATCAGGAGGCTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCCCTGTGGACTTTACCTaGTTGGCAGTGTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: VQKGIRRLGLVLGTEEAAPVDFT*LAVWPM
Trigger: CATGGGCCACACTGCCAAGCAGGTAAAGTCCACAGG...GGCTGCTTCTTCAGTTCCTAATACCAGACCAAGCCTCCTGATGCCTTTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAGCACCCATGAGTCCTTaGACCAGTGCCTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LVLGTEEAAQSLTRTVASAPMSP*TSASPV
Trigger: CACAGGAGAGGCACTGGTGCAAGGACTCATGGGTGC...TGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CTGCTTGGCAGTGTGGCCCATGTTCATTGCATCATTAACCCGGTTTTCCAGGAAGCACCCATGAGTCCTTaGACCAGTGCCTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LLGSVAHVHCIINPVFQEAPMSP*TSASPV
Trigger: CACAGGAGAGGCACTGGTGCAAGGACTCATGGGTGC...TTCCTGGAAAACCGGGTTAATGATGCAATGAACATGGGCCACACTGCCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp GGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGCTTGAGCGTCACTGCTaGACCCATGAGTCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: GTEEAAQSLTRTVASNALLERHC*THESLH
Trigger: GTGCAAGGACTCATGGGTGCAGCAGTGACGCTCAAG...CAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CCAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGGTTCTTGAGCGTCACTaGTGCACCCATGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PIPDQNGSIKCLVVSRWLVLERH*CTHESL
Trigger: CAAGGACTCATGGGTGCAGCAGTGACGCTCAAGAAC...CAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp GTAGATGGCAGCCAGCATGGCTCGGCGGGTGTACCAGTTAAAATCAGTGGACTGCCTGGTCTGTATACCTaGGGGGTGAATGAGAAGACT +
Preference number: 4 (lower is better)
Translates to: VDGSQHGSAGVPVKISGLPGLYT*GVNEKT
Trigger: AGTCTTCTCATTCACCCCCCAGGTATACAGACCAGG...CAGTCCACTGATTTTAACTGGTACACCCGCCGAGCCATGCTGGCTGCCATCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR CCA 90 bp TGCATCATTAACCCGGTTTTCCAGGAAGCGCCAAGTGTCCTCAAAGTCTGGAGAGAGAGACCCAGAGACTaGGCTCCTTCTGCAATCGCC +
Preference number: 4 (lower is better)
Translates to: CIINPVFQEAPSVLKVWRERPRD*APSAIA
Trigger: GGCGATTGCAGAAGGAGCCCAGTCTCTGGGTCTCTC...TCTCCAGACTTTGAGGACACTTGGCGCTTCCTGGAAAACCGGGTTAATGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR CCA 90 bp GCAGCCAGCATGGCTCGGCGGGTGTACCAGTTAAAATCAGTGGACTGGTCCCCAAGCCGGGTATTGCACTaGGTCACAAAATGCAGTATT +
Preference number: 4 (lower is better)
Translates to: AASMARRVYQLKSVDWSPSRVLH*VTKCSI
Trigger: AATACTGCATTTTGTGACCCAGTGCAATACCCGGCT...TGGGGACCAGTCCACTGATTTTAACTGGTACACCCGCCGAGCCATGCTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR CCA 90 bp TTTACCTGCTTGGCAGTGTGGCCCATGTTCATTGCATCATTAACCCGGTTTTCCAGATGGCAGCCAGCATaGCTCGGCGGGTGTACCAGT +
Preference number: 4 (lower is better)
Translates to: FTCLAVWPMFIASLTRFSRWQPA*LGGCTS
Trigger: ACTGGTACACCCGCCGAGCCATGCTGGCTGCCATCT...GGAAAACCGGGTTAATGATGCAATGAACATGGGCCACACTGCCAAGCAGGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR CCA 90 bp CGGTTTTCCAGGAAGCGCCAAGTGTCCTCAAAGTCTGGAGAGGAGTCCTGCATCTGGACTTTACCTGCTTaGCAGTGTGGCCCATGTTCA +
Preference number: 4 (lower is better)
Translates to: RFSRKRQVSSKSGEESCIWTLPA*QCGPCS
Trigger: TGAACATGGGCCACACTGCCAAGCAGGTAAAGTCCA...GATGCAGGACTCCTCTCCAGACTTTGAGGACACTTGGCGCTTCCTGGAAAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR CCA 90 bp AGGCTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGCCAGTGCCTCTCCTGTaGACTTTACCTGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RLGLVLGTEEAAQSLTRTPVPLL*TLPAWQ
Trigger: CTGCCAAGCAGGTAAAGTCCACAGGAGAGGCACTGG...CGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACCAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp GGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCAGCTGTCACCTTGAGGTaGCGTCAGACCTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: GLVLGTEEAAQSLTRTVAAVTLR*RQTLTL
Trigger: CAGAGTCAAGGTCTGACGCCACCTCAAGGTGACAGC...TGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp GGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCAGAGTTGGGAGGCTGCTaGTTCTGCTCATCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: GLVLGTEEAAQSLTRTVAELGGC*FCSSED
Trigger: GTCTTCAGATGAGCAGAAGCAGCAGCCTCCCAACTC...TGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGTCAGGATGCGGTGCTaGAACTGCTCCTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: QSLTRTVASNALWFPGGCVRMRC*NCSSLS
Trigger: TGAAAGTGAGGAGCAGTTGCAGCACCGCATCCTGAC...ACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTATACCCCTTCGGGCTGCCGTCAGGATaGGGTGCTGCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LFQSVRSFSSRHCSLYPFGLPSG*GAATAP
Trigger: AGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCC...GAAGGGGTATAAGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTTTCTGCAATCGCCTCTaGTGTCCACCCGTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: QNTLIILQCMLVSCDTRPFCNRL*CPPVGG
Trigger: CCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAA...AGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp CATGTGACACCAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGCACTGGGTCACAAAATaGAGTATTAGCTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: HVTPGLESHLCPAGTCLRHWVTK*SISSLP
Trigger: TGGCAGTGAGCTAATACTGCATTTTGTGACCCAGTG...CCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTGGTGTCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp GGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGCAGTCTGGTTTCCACTaGATCCCTCAGGAACTGGTC +
Preference number: 4 (lower is better)
Translates to: GTEEAAQSLTRTVASNALQSGFH*IPQELV
Trigger: GACCAGTTCCTGAGGGATGCAGTGGAAACCAGACTG...CAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262507.11
CDS-3UTR GCA 90 bp ATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGTCTGGAGAGGAGTCCTaGATCATCACCAGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: IPDQNGSIKCLVVSRWLWSGEES*IITSSV
Trigger: AACAGAGCTGGTGATGATGCAGGACTCCTCTCCAGA...CCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CCAGTTAAAATCAGTGGACTGGTCCCCAGCGTAATGCCACATGTCATCCACCATCCTGTGGACTTTACCTaGTTGGCAGTGTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: PVKISGLVPSVMPHVIHHPVDFT*LAVWPM
Trigger: CATGGGCCACACTGCCAAGCAGGTAAAGTCCACAGG...ATGGTGGATGACATGTGGCATTACGCTGGGGACCAGTCCACTGATTTTAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR CCA 90 bp ACATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGCATCAGGAGGCTTGCCCACAGCTGAAGCATaGAAGGCACGCGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: TSHFSITQLQCRKASGGLPTAEA*KARGTR
Trigger: CCTGGTGCCGCGTGCCTTCCATGCTTCAGCTGTGGG...CAAGCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp CAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTCCCACAGCTGAAGCATaGAAGGCACGCGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: QNTLIILQCMLVSCDTRPPTAEA*KARGTR
Trigger: CCTGGTGCCGCGTGCCTTCCATGCTTCAGCTGTGGG...AGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563166.1
ENST00000567072.5
CDS-3UTR CCA 90 bp TCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGTCCTGGTCTGTATACCTaGGGGGTGAATGAGAAGACT +
Preference number: 4 (lower is better)
Translates to: SLTRTVASNALWFPGGCGPGLYT*GVNEKT
Trigger: AGTCTTCTCATTCACCCCCCAGGTATACAGACCAGG...ACCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp GTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAAATTCTGCTGTCCACCCGTaGGCGGGCACAAACTCAAGG +
Preference number: 4 (lower is better)
Translates to: VLGTEEAAQSLTRTVASNSAVHP*AGTNSR
Trigger: CCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGA...ATTTGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp CCAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGACCTGCTTGGCAGTGTaGCCCATGTTCATTGCATCA +
Preference number: 4 (lower is better)
Translates to: PIPDQNGSIKCLVVSRWLTCLAV*PMFIAS
Trigger: TGATGCAATGAACATGGGCCACACTGCCAAGCAGGT...CAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp TCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGTTGGACTTTACCTGCTTaGCAGTGTGGCCCATGTTCA +
Preference number: 4 (lower is better)
Translates to: SLTRTVASNALWFPGGCGWTLPA*QCGPCS
Trigger: TGAACATGGGCCACACTGCCAAGCAGGTAAAGTCCA...ACCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp CTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAGCTGTCACCTTGAGGTaGCGTCAGACCTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: LVLGTEEAAQSLTRTVASAVTLR*RQTLTL
Trigger: CAGAGTCAAGGTCTGACGCCACCTCAAGGTGACAGC...TGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp AGGCTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGATGCTGCTGAGAAAATaGGTTGGGAGGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RLGLVLGTEEAAQSLTRTMLLRK*VGRLLL
Trigger: AAGCAGCAGCCTCCCAACTCATTTTCTCAGCAGCAT...CGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACCAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR TCA 90 bp AATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTGGACTTCTAGCACACGTGTaGGCCGGGTATTGCACTGGG +
Preference number: 4 (lower is better)
Translates to: NTLIILQCMLVSCDTRPGLLAHV*AGYCTG
Trigger: CCCAGTGCAATACCCGGCTCACACGTGTGCTAGAAG...TCCAGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp CATGCTGGGTTTCTGTGGCTTGACTGCTTGGATGAACATCTCATTTTTCAATCACATCCACCATGCTGGTaGGCAGGCTCAGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: HAGFLWLDCLDEHLIFQSHPPCW*AGSGWT
Trigger: CGTCCAGCCTGAGCCTGCTCACCAGCATGGTGGATG...TGATTGAAAAATGAGATGTTCATCCAAGCAGTCAAGCCACAGAAACCCAGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp GACTGCTTGGATGAACATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGGCATCTCAGGACACCTaGGAGGGAGGGGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: DCLDEHLIFQSHSCSAERASQDT*EGGGCK
Trigger: CTTGCAGCCCCCTCCCTCTCAGGTGTCCTGAGATGC...CCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGATGTTCATCCAAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp CAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCGCATCTCAGGACACCTaGGAGGGAGGGGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: QTQNTLIILQCMLVSCDTASQDT*EGGGCK
Trigger: CTTGCAGCCCCCTCCCTCTCAGGTGTCCTGAGATGC...GGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp CTCAGGAGTCCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTGGAGGCTGCTGCTTCTaGTCATCTGAAGACCTTAGC +
Preference number: 4 (lower is better)
Translates to: LRSPLVCSREHQVMWMAPGGCCF*SSEDLS
Trigger: GCTAAGGTCTTCAGATGAGCAGAAGCAGCAGCCTCC...AGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGGACTCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGAGTTGGGAGGCTGCTaGTTCTGCTCATCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LGLVLGTEEAAQSLTRTVELGGC*FCSSED
Trigger: GTCTTCAGATGAGCAGAAGCAGCAGCCTCCCAACTC...TACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CCAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGATCAGGTTTTTCTaGCCCCTGTGTCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: PIPDQNGSIKCLVVSRWLWIRFF*PLCLRM
Trigger: CATTCTGAGACACAGGGGGCAGAAAAACCTGATCCA...CAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp AGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGTAGTGACTCAGTCAGGATGCGGTGCTaGAACTGCTCCTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: RTVASNALWFPGGCGSDSVRMRC*NCSSLS
Trigger: TGAAAGTGAGGAGCAGTTGCAGCACCGCATCCTGAC...TGAGTCACTACCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp AGACATGATCAAGGTGCCCATGAGATTGTGACAGGGACATGCTGGGTTTCTGTGGTCAGGATGCGGTGCTaGAACTGCTCCTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: RHDQGAHEIVTGTCWVSVVRMRC*NCSSLS
Trigger: TGAAAGTGAGGAGCAGTTGCAGCACCGCATCCTGAC...CACAGAAACCCAGCATGTCCCTGTCACAATCTCATGGGCACCTTGATCATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp AATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTGGAGCCGTCAGGATGCGGTaGTGCAACTGCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: NTLIILQCMLVSCDTRPGAVRMR*CNCSSL
Trigger: AAGTGAGGAGCAGTTGCAGCACCGCATCCTGACGGC...TCCAGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563166.1
ENST00000567072.5
CDS-3UTR GCA 90 bp CAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCGGGCTGCCGTCAGGATaGGGTGCTGCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QTQNTLIILQCMLVSCDTGLPSG*GAATAP
Trigger: AGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCC...GGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563166.1
ENST00000567072.5
CDS-3UTR GCA 90 bp TTCAATCACACAGTTGCAGTGCAGAAAGGCATCAGGAGGCTTGGTCTGGTATTACACAAACTCAAGGGCTaGCGTCAGGATGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: FNHTVAVQKGIRRLGLVLHKLKG*RQDAVL
Trigger: CAGCACCGCATCCTGACGGCAGCCCTTGAGTTTGTG...TAATACCAGACCAAGCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp AATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTGGACACAAACTCAAGGGCTaGCGTCAGGATGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: NTLIILQCMLVSCDTRPGHKLKG*RQDAVL
Trigger: CAGCACCGCATCCTGACGGCAGCCCTTGAGTTTGTG...TCCAGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563166.1
ENST00000567072.5
CDS-3UTR GCA 90 bp ATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGCATCAGGAGGCTTGGTCCCGAACATGCTGGCTaGTGCACTGGAGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: ISFFNHTVAVQKGIRRLGPEHAG*CTGETQ
Trigger: CTGGGTCTCTCCAGTGCAGCAGCCAGCATGTTCGGG...ACCAAGCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp AAAATCAGTGGACTGGTCCCCAGCGTAATGCCACATGTCATCCACCATGCTGGTGCAGTATTAGCTCACTaGCATCCTTCCCGAACATGC +
Preference number: 4 (lower is better)
Translates to: KISGLVPSVMPHVIHHAGAVLAH*HPSRTC
Trigger: GCATGTTCGGGAAGGATGGCAGTGAGCTAATACTGC...ACCAGCATGGTGGATGACATGTGGCATTACGCTGGGGACCAGTCCACTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp GGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCAGCAGTATTAGCTCACTaGCATCCTTCCCGAACATGC +
Preference number: 4 (lower is better)
Translates to: GLVLGTEEAAQSLTRTVAAVLAH*HPSRTC
Trigger: GCATGTTCGGGAAGGATGGCAGTGAGCTAATACTGC...TGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp ATTAACCCGGTTTTCCAGGAAGCGCCAAGTGTCCTCAAAGTCTGGAGAGGAGTCTCTGGAGAGGAGTCCTaGATCATCACCAGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: INPVFQEAPSVLKVWRGVSGEES*IITSSV
Trigger: AACAGAGCTGGTGATGATGCAGGACTCCTCTCCAGA...GACTCCTCTCCAGACTTTGAGGACACTTGGCGCTTCCTGGAAAACCGGGTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp GTAGATGGCAGCCAGCATGGCTCGGCGGGTGTACCAGTTAAAATCAGTGGACTGGTGGCCCATGTTCATTaGATCATTAACCCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: VDGSQHGSAGVPVKISGLVAHVH*IINPVF
Trigger: GAAAACCGGGTTAATGATGCAATGAACATGGGCCAC...CAGTCCACTGATTTTAACTGGTACACCCGCCGAGCCATGCTGGCTGCCATCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp GTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAAATGCACCCATGAGTCCTTaGACCAGTGCCTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: VLGTEEAAQSLTRTVASNAPMSP*TSASPV
Trigger: CACAGGAGAGGCACTGGTGCAAGGACTCATGGGTGC...ATTTGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CTCAGGAGTCCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTGTTCTTGAGCGTCACTaGTGCACCCATGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LRSPLVCSREHQVMWMAPVLERH*CTHESL
Trigger: CAAGGACTCATGGGTGCAGCAGTGACGCTCAAGAAC...AGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGGACTCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp ACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCTGGAATCACACCTCTaGTGTCCACCCGTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: TQNTLIILQCMLVSCDTRLESHL*CPPVGG
Trigger: CCCGCCCACGGGTGGACAGCAGAGGTGTGATTCCAG...CCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563166.1
CDS-3UTR CCA 90 bp TTGTCTCAGGTGAGGCAGTTTTCTGAGGGGGCTCCCAGGAACAGCATCTCAGGAAGCCGGGTATTGCACTaGGTCACAAAATGCAGTATT +
Preference number: 4 (lower is better)
Translates to: LSQVRQFSEGAPRNSISGSRVLH*VTKCSI
Trigger: AATACTGCATTTTGTGACCCAGTGCAATACCCGGCT...TCCTGAGATGCTGTTCCTGGGAGCCCCCTCAGAAAACTGCCTCACCTGAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp ATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGAGTGTCCTCAAAGTCTaGAGAGGAGTCCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: IPDQNGSIKCLVVSRWLWSVLKV*RGVLHH
Trigger: ATGATGCAGGACTCCTCTCCAGACTTTGAGGACACT...CCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp GTGCAGAAAGGCATCAGGAGGCTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCACCTGCTTGGCAGTGTaGCCCATGTTCATTGCATCA +
Preference number: 4 (lower is better)
Translates to: VQKGIRRLGLVLGTEEAATCLAV*PMFIAS
Trigger: TGATGCAATGAACATGGGCCACACTGCCAAGCAGGT...GGCTGCTTCTTCAGTTCCTAATACCAGACCAAGCCTCCTGATGCCTTTCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp GGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCCTCTCACCGACGCTaGTTTAGACCTGTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: GLVLGTEEAAQSLTRTVASSHRR*FRPVKF
Trigger: GAACTTGACAGGTCTAAACCAGCGTCGGTGAGAGGA...TGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp GGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCAGCATCAAATGCCTTGTaGTTTCCAGGTGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: GLVLGTEEAAQSLTRTVAASNAL*FPGGCG
Trigger: ACCACAGCCACCTGGAAACCACAAGGCATTTGATGC...TGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR TCA 90 bp CTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAATGCTGCTGAGAAAATaGGTTGGGAGGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LGLVLGTEEAAQSLTRTVMLLRK*VGRLLL
Trigger: AAGCAGCAGCCTCCCAACTCATTTTCTCAGCAGCAT...TACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR TCA 90 bp GGTGTACCAGTTAAAATCAGTGGACTGGTCCCCAGCGTAATGCCACATGTCATCGTCTCAGAATGCTGCTaGGAAAATGAGTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GVPVKISGLVPSVMPHVIVSECC*ENELGG
Trigger: GCCTCCCAACTCATTTTCTCAGCAGCATTCTGAGAC...GATGACATGTGGCATTACGCTGGGGACCAGTCCACTGATTTTAACTGGTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp AGGCTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGAATGAGTTGGGAGGCTaGTGCTTCTGCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: RLGLVLGTEEAAQSLTRTNELGG*CFCSSE
Trigger: TTCAGATGAGCAGAAGCAGCAGCCTCCCAACTCATT...CGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACCAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp GTGCAGAAAGGCATCAGGAGGCTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCAATGAGTTGGGAGGCTaGTGCTTCTGCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: VQKGIRRLGLVLGTEEAANELGG*CFCSSE
Trigger: TTCAGATGAGCAGAAGCAGCAGCCTCCCAACTCATT...GGCTGCTTCTTCAGTTCCTAATACCAGACCAAGCCTCCTGATGCCTTTCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTTATACTTTTAGGGCCCGGGGCCAGTaGTCAATGTATGGGATCAGC +
Preference number: 4 (lower is better)
Translates to: PLVCSREHQVMWMAPYTFRARGQ*SMYGIS
Trigger: GCTGATCCCATACATTGAGCACTGGCCCCGGGCCCT...AAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262507.11
CDS-3UTR GCA 90 bp CTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCATCTGGAGAGGAGTCCTaGATCATCACCAGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LVLGTEEAAQSLTRTVASSGEES*IITSSV
Trigger: AACAGAGCTGGTGATGATGCAGGACTCCTCTCCAGA...TGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp TCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGTGTGGCCCATGTTCATTaGATCATTAACCCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: SLTRTVASNALWFPGGCGVAHVH*IINPVF
Trigger: GAAAACCGGGTTAATGATGCAATGAACATGGGCCAC...ACCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp AGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGTAGTGACTCACCTGGTCTGTATACCTaGGGGGTGAATGAGAAGACT +
Preference number: 4 (lower is better)
Translates to: RTVASNALWFPGGCGSDSPGLYT*GVNEKT
Trigger: AGTCTTCTCATTCACCCCCCAGGTATACAGACCAGG...TGAGTCACTACCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp CAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCTCTGCTGTCCACCCGTaGGCGGGCACAAACTCAAGG +
Preference number: 4 (lower is better)
Translates to: QTQNTLIILQCMLVSCDTSAVHP*AGTNSR
Trigger: CCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGA...GGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563166.1
ENST00000567072.5
CDS-3UTR CCA 90 bp ATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGCATCAGGAGGCTTGGTGAGAGACCCAGAGACTaGGCTCCTTCTGCAATCGCC +
Preference number: 4 (lower is better)
Translates to: ISFFNHTVAVQKGIRRLGERPRD*APSAIA
Trigger: GGCGATTGCAGAAGGAGCCCAGTCTCTGGGTCTCTC...ACCAAGCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp GGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTCAGCATTCTCAGTCTaGTTTCCACTGCATCCCTCA +
Preference number: 4 (lower is better)
Translates to: GTEEAAQSLTRTVASNALSAFSV*FPLHPS
Trigger: TGAGGGATGCAGTGGAAACCAGACTGAGAATGCTGA...CAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262507.11
CDS-3UTR CCA 90 bp AAAATCAGTGGACTGGTCCCCAGCGTAATGCCACATGTCATCCACCATGCTGGTAGTGTCCTCAAAGTCTaGAGAGGAGTCCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: KISGLVPSVMPHVIHHAGSVLKV*RGVLHH
Trigger: ATGATGCAGGACTCCTCTCCAGACTTTGAGGACACT...ACCAGCATGGTGGATGACATGTGGCATTACGCTGGGGACCAGTCCACTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR CCA 90 bp GAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTTGGACTTTACCTGCTTaGCAGTGTGGCCCATGTTCA +
Preference number: 4 (lower is better)
Translates to: EEAAQSLTRTVASNALWFWTLPA*QCGPCS
Trigger: TGAACATGGGCCACACTGCCAAGCAGGTAAAGTCCA...AAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR TCA 90 bp CAAAGCTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTATACCCTGGACGGGATGTTGTaGGGGAGCATGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: QSSFNLSAHSLLGIVAYTLDGML*GSMRML
Trigger: CAGCATCCTCATGCTCCCTCACAACATCCCGTCCAG...GGTATAAGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp TTACAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACCATCCACCATGCTGGTaGGCAGGCTCAGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: LQTQNTLIILQCMLVSCDHPPCW*AGSGWT
Trigger: CGTCCAGCCTGAGCCTGCTCACCAGCATGGTGGATG...GTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262507.11
CDS-3UTR TCA 90 bp CCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTTATACTTTTTCACTGCTGCACCCATaGGTCCTTGCACCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: PLVCSREHQVMWMAPYTFSLLHP*VLAPVP
Trigger: AGGCACTGGTGCAAGGACTCATGGGTGCAGCAGTGA...AAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR TCA 90 bp TCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGTTTTAGTGTGTTCTCGTaGACACCAGGTTATGTGGAT +
Preference number: 4 (lower is better)
Translates to: SLTRTVASNALWFPGGCGFSVFS*TPGYVD
Trigger: ATCCACATAACCTGGTGTTCACGAGAACACACTAAA...ACCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR TCA 90 bp CTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTATACCCCTTCCATGCTGGTGTCATGTaGCACCAGGCCTGGAATCAC +
Preference number: 4 (lower is better)
Translates to: LFQSVRSFSSRHCSLYPFHAGVM*HQAWNH
Trigger: GTGATTCCAGGCCTGGTGTCACATGACACCAGCATG...GAAGGGGTATAAGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp CCAGTTAAAATCAGTGGACTGGTCCCCAGCGTAATGCCACATGTCATCCACCATAATGAGTTGGGAGGCTaGTGCTTCTGCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: PVKISGLVPSVMPHVIHHNELGG*CFCSSE
Trigger: TTCAGATGAGCAGAAGCAGCAGCCTCCCAACTCATT...ATGGTGGATGACATGTGGCATTACGCTGGGGACCAGTCCACTGATTTTAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp AGACATGATCAAGGTGCCCATGAGATTGTGACAGGGACATGCTGGGTTTCTGTGTGGATCAGGTTTTTCTaGCCCCTGTGTCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: RHDQGAHEIVTGTCWVSVWIRFF*PLCLRM
Trigger: CATTCTGAGACACAGGGGGCAGAAAAACCTGATCCA...CACAGAAACCCAGCATGTCCCTGTCACAATCTCATGGGCACCTTGATCATGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp CTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCATGGATCAGGTTTTTCTaGCCCCTGTGTCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: LVLGTEEAAQSLTRTVASWIRFF*PLCLRM
Trigger: CATTCTGAGACACAGGGGGCAGAAAAACCTGATCCA...TGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp AATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTGGAGTCAGGATGCGGTGCTaGAACTGCTCCTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: NTLIILQCMLVSCDTRPGVRMRC*NCSSLS
Trigger: TGAAAGTGAGGAGCAGTTGCAGCACCGCATCCTGAC...TCCAGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563166.1
ENST00000567072.5
CDS-3UTR GCA 90 bp CCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTTATACTTTTCACAAACTCAAGGGCTaGCGTCAGGATGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PLVCSREHQVMWMAPYTFHKLKG*RQDAVL
Trigger: CAGCACCGCATCCTGACGGCAGCCCTTGAGTTTGTG...AAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp TTACAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACTTCTGCAATCGCCTCTaGTGTCCACCCGTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LQTQNTLIILQCMLVSCDFCNRL*CPPVGG
Trigger: CCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAA...GTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262507.11
CDS-3UTR GCA 90 bp ATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGCATCAGGAGGCTTGGTGAACATGCTGGCTGCTaGACTGGAGAGACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ISFFNHTVAVQKGIRRLGEHAGC*TGETQR
Trigger: TCTCTGGGTCTCTCCAGTGCAGCAGCCAGCATGTTC...ACCAAGCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp GTGCAGAAAGGCATCAGGAGGCTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCCACTGGGTCACAAAATaGAGTATTAGCTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: VQKGIRRLGLVLGTEEAAHWVTK*SISSLP
Trigger: TGGCAGTGAGCTAATACTGCATTTTGTGACCCAGTG...GGCTGCTTCTTCAGTTCCTAATACCAGACCAAGCCTCCTGATGCCTTTCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp GTGCAGAAAGGCATCAGGAGGCTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCGTGGCCCATGTTCATTaGATCATTAACCCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: VQKGIRRLGLVLGTEEAAVAHVH*IINPVF
Trigger: GAAAACCGGGTTAATGATGCAATGAACATGGGCCAC...GGCTGCTTCTTCAGTTCCTAATACCAGACCAAGCCTCCTGATGCCTTTCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp ATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGCATCAGGAGGCTTGGTCCTGTGGACTTTACCTaGTTGGCAGTGTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: ISFFNHTVAVQKGIRRLGPVDFT*LAVWPM
Trigger: CATGGGCCACACTGCCAAGCAGGTAAAGTCCACAGG...ACCAAGCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp GACTGCTTGGATGAACATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGGCACCCATGAGTCCTTaGACCAGTGCCTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: DCLDEHLIFQSHSCSAERAPMSP*TSASPV
Trigger: CACAGGAGAGGCACTGGTGCAAGGACTCATGGGTGC...CCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGATGTTCATCCAAGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp CTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTATACCCCTTCCTTGAGCGTCACTGCTaGACCCATGAGTCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LFQSVRSFSSRHCSLYPFLERHC*THESLH
Trigger: GTGCAAGGACTCATGGGTGCAGCAGTGACGCTCAAG...GAAGGGGTATAAGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp GCAGTGCAGAAAGGCATCAGGAGGCTTGGTCTGGTATTAGGAACTGAAGAAGCAAACGGTAGCATCAAATaGCTTGTGGTTTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AVQKGIRRLGLVLGTEEANGSIK*LVVSRW
Trigger: CCACCTGGAAACCACAAGGCATTTGATGCTACCGTT...TGCTTCTTCAGTTCCTAATACCAGACCAAGCCTCCTGATGCCTTTCTGCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp ATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGTTTCAATCACACAGTTaGAGTGCAGAAAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: IPDQNGSIKCLVVSRWLWFQSHS*SAERHQ
Trigger: CTGATGCCTTTCTGCACTGCAACTGTGTGATTGAAA...CCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp CCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTTATACTTTTGAGAGACCCAGAGACTaGGCTCCTTCTGCAATCGCC +
Preference number: 4 (lower is better)
Translates to: PLVCSREHQVMWMAPYTFERPRD*APSAIA
Trigger: GGCGATTGCAGAAGGAGCCCAGTCTCTGGGTCTCTC...AAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp TTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTTATACTTTTCAATGCTGGCTGCTGCACTaGAGAGACCCAGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: LVCSREHQVMWMAPYTFQCWLLH*RDPETG
Trigger: CCCAGTCTCTGGGTCTCTCCAGTGCAGCAGCCAGCA...TTGAAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp TTCTGTGGCTTGACTGCTTGGATGAACATCTCATTTTTCAATCACACAGTTGCAAGATGGCAGCCAGCATaGCTCGGCGGGTGTACCAGT +
Preference number: 4 (lower is better)
Translates to: FCGLTAWMNISFFNHTVARWQPA*LGGCTS
Trigger: ACTGGTACACCCGCCGAGCCATGCTGGCTGCCATCT...TGCAACTGTGTGATTGAAAAATGAGATGTTCATCCAAGCAGTCAAGCCACAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp TTGTCTCAGGTGAGGCAGTTTTCTGAGGGGGCTCCCAGGAACAGCATCTCAGGAGAACACCAGGTTATGTaGATGGCACCTTATACTTTT +
Preference number: 4 (lower is better)
Translates to: LSQVRQFSEGAPRNSISGEHQVM*MAPYTF
Trigger: AAAAGTATAAGGTGCCATCCACATAACCTGGTGTTC...TCCTGAGATGCTGTTCCTGGGAGCCCCCTCAGAAAACTGCCTCACCTGAGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp AATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTGGAGTCTCAGAATGCTGCTaGGAAAATGAGTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: NTLIILQCMLVSCDTRPGVSECC*ENELGG
Trigger: GCCTCCCAACTCATTTTCTCAGCAGCATTCTGAGAC...TCCAGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563166.1
ENST00000567072.5
CDS-3UTR TCA 90 bp ACATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGCATCAGGAGGCTTGGTGCCCATGAGATTGTaGCAGGGACATGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: TSHFSITQLQCRKASGGLVPMRL*QGHAGF
Trigger: AAACCCAGCATGTCCCTGTCACAATCTCATGGGCAC...CAAGCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp ACTTTTCAAAGCTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTGGCACTTGTCTCAGGTaGGGCAGTTTTCTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TFQSSFNLSAHSLLGIVAGTCLR*GSFLRG
Trigger: CCCCCTCAGAAAACTGCCTCACCTGAGACAAGTGCC...AGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAGCTTTGAAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp TTCTGTGGCTTGACTGCTTGGATGAACATCTCATTTTTCAATCACACAGTTGCAGGCACTTGTCTCAGGTaGGGCAGTTTTCTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: FCGLTAWMNISFFNHTVAGTCLR*GSFLRG
Trigger: CCCCCTCAGAAAACTGCCTCACCTGAGACAAGTGCC...TGCAACTGTGTGATTGAAAAATGAGATGTTCATCCAAGCAGTCAAGCCACAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp CAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCCATGCTGGTGTCATGTaGCACCAGGCCTGGAATCAC +
Preference number: 4 (lower is better)
Translates to: QTQNTLIILQCMLVSCDTHAGVM*HQAWNH
Trigger: GTGATTCCAGGCCTGGTGTCACATGACACCAGCATG...GGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563166.1
ENST00000567072.5
CDS-3UTR GCA 90 bp TCTCCTGTGGACTTTACCTGCTTGGCAGTGTGGCCCATGTTCATTGCATCATTATGGATCAGGTTTTTCTaGCCCCTGTGTCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: SPVDFTCLAVWPMFIASLWIRFF*PLCLRM
Trigger: CATTCTGAGACACAGGGGGCAGAAAAACCTGATCCA...TAATGATGCAATGAACATGGGCCACACTGCCAAGCAGGTAAAGTCCACAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp CATGCTGGGTTTCTGTGGCTTGACTGCTTGGATGAACATCTCATTTTTCAATCACATCCTTCCCGAACATaGTGGCTGCTGCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: HAGFLWLDCLDEHLIFQSHPSRT*WLLHWR
Trigger: TCTCCAGTGCAGCAGCCAGCATGTTCGGGAAGGATG...TGATTGAAAAATGAGATGTTCATCCAAGCAGTCAAGCCACAGAAACCCAGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp TCTCCTGTGGACTTTACCTGCTTGGCAGTGTGGCCCATGTTCATTGCATCATTAAACTGTACCAGCTTCTaGTCCTCTTCTAGCACACGT +
Preference number: 4 (lower is better)
Translates to: SPVDFTCLAVWPMFIASLNCTSF*SSSSTR
Trigger: ACGTGTGCTAGAAGAGGAGCAGAAGCTGGTACAGTT...TAATGATGCAATGAACATGGGCCACACTGCCAAGCAGGTAAAGTCCACAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp ACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCTTGAGCGTCACTGCTaGACCCATGAGTCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: TQNTLIILQCMLVSCDTRLERHC*THESLH
Trigger: GTGCAAGGACTCATGGGTGCAGCAGTGACGCTCAAG...CCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp CTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTATACCCCTTCGTTCTTGAGCGTCACTaGTGCACCCATGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LFQSVRSFSSRHCSLYPFVLERH*CTHESL
Trigger: CAAGGACTCATGGGTGCAGCAGTGACGCTCAAGAAC...GAAGGGGTATAAGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGAACACCTCTGTGTaGACACGCCTGTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QTQNTLIILQCMLVSCDTRNTSV*TRLCCA
Trigger: AGCACAGCACAGGCGTGTGCACACAGAGGTGTTCCT...GGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp GGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCACTAATAATCCTGCAATaGATGCTGGTGTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: GLVLGTEEAAQSLTRTVALIILQ*MLVSCD
Trigger: GTCACATGACACCAGCATGCATTGCAGGATTATTAG...TGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp CTCAGGAGTCCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTAGCCGGGTATTGCACTaGGTCACAAAATGCAGTATT +
Preference number: 4 (lower is better)
Translates to: LRSPLVCSREHQVMWMAPSRVLH*VTKCSI
Trigger: AATACTGCATTTTGTGACCCAGTGCAATACCCGGCT...AGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGGACTCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp ATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGCATCAGGAGGCTTGGTTCCTGCAATGCATGCTaGTGTCATGTGACACCAGGC +
Preference number: 4 (lower is better)
Translates to: ISFFNHTVAVQKGIRRLGSCNAC*CHVTPG
Trigger: GCCTGGTGTCACATGACACCAGCATGCATTGCAGGA...ACCAAGCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp CAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTATGCTGCTGAGAAAATaGGTTGGGAGGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QNTLIILQCMLVSCDTRPMLLRK*VGRLLL
Trigger: AAGCAGCAGCCTCCCAACTCATTTTCTCAGCAGCAT...AGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563166.1
ENST00000567072.5
CDS-3UTR TCA 90 bp CAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCGTGCCCATGAGATTGTaGCAGGGACATGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: QTQNTLIILQCMLVSCDTVPMRL*QGHAGF
Trigger: AAACCCAGCATGTCCCTGTCACAATCTCATGGGCAC...GGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp ATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGCATCAGGAGGCTTGGTGCAGTATTAGCTCACTaGCATCCTTCCCGAACATGC +
Preference number: 4 (lower is better)
Translates to: ISFFNHTVAVQKGIRRLGAVLAH*HPSRTC
Trigger: GCATGTTCGGGAAGGATGGCAGTGAGCTAATACTGC...ACCAAGCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp TTTACCTGCTTGGCAGTGTGGCCCATGTTCATTGCATCATTAACCCGGTTTTCCCACTGGGTCACAAAATaGAGTATTAGCTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: FTCLAVWPMFIASLTRFSHWVTK*SISSLP
Trigger: TGGCAGTGAGCTAATACTGCATTTTGTGACCCAGTG...GGAAAACCGGGTTAATGATGCAATGAACATGGGCCACACTGCCAAGCAGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR GCA 90 bp ACTTTTCAAAGCTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTCTGAGGGCCAGCTTCTaGTCCTCTTCTAGCACACGT +
Preference number: 4 (lower is better)
Translates to: TFQSSFNLSAHSLLGIVALRASF*SSSSTR
Trigger: ACGTGTGCTAGAAGAGGAGCAGAAGCTGGCCCTCAG...AGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAGCTTTGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567072.5
CDS-3UTR CCA 90 bp CAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTCCTGGTCTGTATACCTaGGGGGTGAATGAGAAGACT +
Preference number: 4 (lower is better)
Translates to: QNTLIILQCMLVSCDTRPPGLYT*GVNEKT
Trigger: AGTCTTCTCATTCACCCCCCAGGTATACAGACCAGG...AGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563166.1
ENST00000567072.5
CDS-3UTR CCA 90 bp CAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTTGGACTTTACCTGCTTaGCAGTGTGGCCCATGTTCA +
Preference number: 4 (lower is better)
Translates to: QNTLIILQCMLVSCDTRPWTLPA*QCGPCS
Trigger: TGAACATGGGCCACACTGCCAAGCAGGTAAAGTCCA...AGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp ACTTTTCAAAGCTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTCCAGTGCCTCTCCTGTaGACTTTACCTGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: TFQSSFNLSAHSLLGIVAPVPLL*TLPAWQ
Trigger: CTGCCAAGCAGGTAAAGTCCACAGGAGAGGCACTGG...AGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAGCTTTGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp CTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTATACCCCTTCTCCTCTCACCGACGCTaGTTTAGACCTGTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LFQSVRSFSSRHCSLYPFSSHRR*FRPVKF
Trigger: GAACTTGACAGGTCTAAACCAGCGTCGGTGAGAGGA...GAAGGGGTATAAGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR TCA 90 bp GACTGCTTGGATGAACATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGGTCTCAGAATGCTGCTaGGAAAATGAGTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: DCLDEHLIFQSHSCSAERVSECC*ENELGG
Trigger: GCCTCCCAACTCATTTTCTCAGCAGCATTCTGAGAC...CCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGATGTTCATCCAAGCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp ACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGGTCTCAGAATGCTGCTaGGAAAATGAGTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TQNTLIILQCMLVSCDTRVSECC*ENELGG
Trigger: GCCTCCCAACTCATTTTCTCAGCAGCATTCTGAGAC...CCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563166.1
ENST00000567072.5
CDS-3UTR TCA 90 bp CAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTTCTGGTATTAGGAACTaGAGAAGCAGCCCAATCCCT +
Preference number: 4 (lower is better)
Translates to: QNTLIILQCMLVSCDTRPSGIRN*RSSPIP
Trigger: AGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGA...AGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp TTACAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACCATGCTGGTGTCATGTaGCACCAGGCCTGGAATCAC +
Preference number: 4 (lower is better)
Translates to: LQTQNTLIILQCMLVSCDHAGVM*HQAWNH
Trigger: GTGATTCCAGGCCTGGTGTCACATGACACCAGCATG...GTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000563166.1
CDS-3UTR GCA 90 bp AATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTGGAGTGGCCCATGTTCATTaGATCATTAACCCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: NTLIILQCMLVSCDTRPGVAHVH*IINPVF
Trigger: GAAAACCGGGTTAATGATGCAATGAACATGGGCCAC...TCCAGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp GACTGCTTGGATGAACATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGATCACACAGTTGCAGTaGAGAAAGGCATCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: DCLDEHLIFQSHSCSAERITQLQ*RKASGG
Trigger: GCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGAT...CCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGATGTTCATCCAAGCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp GAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTTTTCTGTGGCTTGACTaGTTGGATGAACATCTCATT +
Preference number: 4 (lower is better)
Translates to: EEAAQSLTRTVASNALWFFLWLD*LDEHLI
Trigger: AATGAGATGTTCATCCAAGCAGTCAAGCCACAGAAA...AAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp CAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCCCTGGTCTGTATACCTaGGGGGTGAATGAGAAGACT +
Preference number: 4 (lower is better)
Translates to: QTQNTLIILQCMLVSCDTPGLYT*GVNEKT
Trigger: AGTCTTCTCATTCACCCCCCAGGTATACAGACCAGG...GGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563166.1
ENST00000567072.5
CDS-3UTR CCA 90 bp CAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCACCTGCTTGGCAGTGTaGCCCATGTTCATTGCATCA +
Preference number: 4 (lower is better)
Translates to: QTQNTLIILQCMLVSCDTTCLAV*PMFIAS
Trigger: TGATGCAATGAACATGGGCCACACTGCCAAGCAGGT...GGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp CAAAGCTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTATACCGCATCAAATGCCTTGTaGTTTCCAGGTGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QSSFNLSAHSLLGIVAYTASNAL*FPGGCG
Trigger: ACCACAGCCACCTGGAAACCACAAGGCATTTGATGC...GGTATAAGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp TTCTGTGGCTTGACTGCTTGGATGAACATCTCATTTTTCAATCACACAGTTGCATCCTGCAATGCATGCTaGTGTCATGTGACACCAGGC +
Preference number: 4 (lower is better)
Translates to: FCGLTAWMNISFFNHTVASCNAC*CHVTPG
Trigger: GCCTGGTGTCACATGACACCAGCATGCATTGCAGGA...TGCAACTGTGTGATTGAAAAATGAGATGTTCATCCAAGCAGTCAAGCCACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR TCA 90 bp ACTTTTCAAAGCTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTGTCTCAGAATGCTGCTaGGAAAATGAGTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TFQSSFNLSAHSLLGIVAVSECC*ENELGG
Trigger: GCCTCCCAACTCATTTTCTCAGCAGCATTCTGAGAC...AGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAGCTTTGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR TCA 90 bp CCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTTATACTTTTTCTGGTATTAGGAACTaGAGAAGCAGCCCAATCCCT +
Preference number: 4 (lower is better)
Translates to: PLVCSREHQVMWMAPYTFSGIRN*RSSPIP
Trigger: AGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGA...AAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAATGAGTTGGGAGGCTaGTGCTTCTGCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: QTQNTLIILQCMLVSCDTNELGG*CFCSSE
Trigger: TTCAGATGAGCAGAAGCAGCAGCCTCCCAACTCATT...GGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563166.1
ENST00000567072.5
CDS-3UTR GCA 90 bp CCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTTATACTTTTAATGAGTTGGGAGGCTaGTGCTTCTGCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: PLVCSREHQVMWMAPYTFNELGG*CFCSSE
Trigger: TTCAGATGAGCAGAAGCAGCAGCCTCCCAACTCATT...AAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CAAAGCTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTATACCAACTGTACCAGCTTCTaGTCCTCTTCTAGCACACGT +
Preference number: 4 (lower is better)
Translates to: QSSFNLSAHSLLGIVAYTNCTSF*SSSSTR
Trigger: ACGTGTGCTAGAAGAGGAGCAGAAGCTGGTACAGTT...GGTATAAGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262507.11
CDS-3UTR GCA 90 bp CATGCTGGGTTTCTGTGGCTTGACTGCTTGGATGAACATCTCATTTTTCAATCAAACGGTAGCATCAAATaGCTTGTGGTTTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HAGFLWLDCLDEHLIFQSNGSIK*LVVSRW
Trigger: CCACCTGGAAACCACAAGGCATTTGATGCTACCGTT...TGATTGAAAAATGAGATGTTCATCCAAGCAGTCAAGCCACAGAAACCCAGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp GACTGCTTGGATGAACATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGAACGGTAGCATCAAATaGCTTGTGGTTTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: DCLDEHLIFQSHSCSAERNGSIK*LVVSRW
Trigger: CCACCTGGAAACCACAAGGCATTTGATGCTACCGTT...CCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGATGTTCATCCAAGCAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp CCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTTATACTTTTCATGCTGGGTTTCTGTaGCTTGACTGCTTGGATGAA +
Preference number: 4 (lower is better)
Translates to: PLVCSREHQVMWMAPYTFHAGFL*LDCLDE
Trigger: TTCATCCAAGCAGTCAAGCCACAGAAACCCAGCATG...AAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp TTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTTATACTTTTCAAGTGTACCAGTTAAACTaGGCTCCTTCTGCAATCGCC +
Preference number: 4 (lower is better)
Translates to: LVCSREHQVMWMAPYTFQVYQLN*APSAIA
Trigger: GGCGATTGCAGAAGGAGCCCAGTTTAACTGGTACAC...TTGAAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567933.5
CDS-3UTR TCA 90 bp TTACAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACATGCTGCTGAGAAAATaGGTTGGGAGGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LQTQNTLIILQCMLVSCDMLLRK*VGRLLL
Trigger: AAGCAGCAGCCTCCCAACTCATTTTCTCAGCAGCAT...GTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000563166.1
CDS-3UTR TCA 90 bp CTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTATACCCCTTCTTTAGTGTGTTCTCGTaGACACCAGGTTATGTGGAT +
Preference number: 4 (lower is better)
Translates to: LFQSVRSFSSRHCSLYPFFSVFS*TPGYVD
Trigger: ATCCACATAACCTGGTGTTCACGAGAACACACTAAA...GAAGGGGTATAAGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp CTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTATACCCCTTCTTTCAATCACACAGTTaGAGTGCAGAAAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: LFQSVRSFSSRHCSLYPFFQSHS*SAERHQ
Trigger: CTGATGCCTTTCTGCACTGCAACTGTGTGATTGAAA...GAAGGGGTATAAGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp ACTTTTCAAAGCTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTAGTGTCCTCAAAGTCTaGAGAGGAGTCCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: TFQSSFNLSAHSLLGIVASVLKV*RGVLHH
Trigger: ATGATGCAGGACTCCTCTCCAGACTTTGAGGACACT...AGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAGCTTTGAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp TTCTGTGGCTTGACTGCTTGGATGAACATCTCATTTTTCAATCACACAGTTGCACATGCTGGGTTTCTGTaGCTTGACTGCTTGGATGAA +
Preference number: 4 (lower is better)
Translates to: FCGLTAWMNISFFNHTVAHAGFL*LDCLDE
Trigger: TTCATCCAAGCAGTCAAGCCACAGAAACCCAGCATG...TGCAACTGTGTGATTGAAAAATGAGATGTTCATCCAAGCAGTCAAGCCACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp TTTTTACAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGAGTTGGGAGGCTGCTaGTTCTGCTCATCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: FLQTQNTLIILQCMLVSCELGGC*FCSSED
Trigger: GTCTTCAGATGAGCAGAAGCAGCAGCCTCCCAACTC...ACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000563166.1
CDS-3UTR GCA 90 bp TTACAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACTGGATCAGGTTTTTCTaGCCCCTGTGTCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: LQTQNTLIILQCMLVSCDWIRFF*PLCLRM
Trigger: CATTCTGAGACACAGGGGGCAGAAAAACCTGATCCA...GTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000563166.1
CDS-3UTR GCA 90 bp ACATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGCATCAGGAGGCTTGTTTCTGTGGCTTGACTaGTTGGATGAACATCTCATT +
Preference number: 4 (lower is better)
Translates to: TSHFSITQLQCRKASGGLFLWLD*LDEHLI
Trigger: AATGAGATGTTCATCCAAGCAGTCAAGCCACAGAAA...CAAGCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR GCA 90 bp ACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCTAATAATCCTGCAATaGATGCTGGTGTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: TQNTLIILQCMLVSCDTRLIILQ*MLVSCD
Trigger: GTCACATGACACCAGCATGCATTGCAGGATTATTAG...CCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563166.1
ENST00000567072.5
CDS-3UTR CCA 90 bp CTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTATACCCCTTCTGTGGCTTGACTGCTTaGATGAACATCTCATTTTTC +
Preference number: 4 (lower is better)
Translates to: LFQSVRSFSSRHCSLYPFCGLTA*MNISFF
Trigger: GAAAAATGAGATGTTCATCCAAGCAGTCAAGCCACA...GAAGGGGTATAAGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp TTTTTACAGACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTTCCTGCAATGCATGCTaGTGTCATGTGACACCAGGC +
Preference number: 4 (lower is better)
Translates to: FLQTQNTLIILQCMLVSCSCNAC*CHVTPG
Trigger: GCCTGGTGTCACATGACACCAGCATGCATTGCAGGA...ACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGTCTGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000563166.1
CDS-3UTR TCA 90 bp ACTTTTCAAAGCTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTTTAGTGTGTTCTCGTaGACACCAGGTTATGTGGAT +
Preference number: 4 (lower is better)
Translates to: TFQSSFNLSAHSLLGIVAFSVFS*TPGYVD
Trigger: ATCCACATAACCTGGTGTTCACGAGAACACACTAAA...AGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAGCTTTGAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR GCA 90 bp TTCTGTGGCTTGACTGCTTGGATGAACATCTCATTTTTCAATCACACAGTTGCACTAATAATCCTGCAATaGATGCTGGTGTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: FCGLTAWMNISFFNHTVALIILQ*MLVSCD
Trigger: GTCACATGACACCAGCATGCATTGCAGGATTATTAG...TGCAACTGTGTGATTGAAAAATGAGATGTTCATCCAAGCAGTCAAGCCACAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp CTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTATACCCCTTCACCAGGTTATGTGGATaGCACCTTATACTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LFQSVRSFSSRHCSLYPFTRLCG*HLILFK
Trigger: TTTGAAAAGTATAAGGTGCCATCCACATAACCTGGT...GAAGGGGTATAAGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp CAAAGCTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTATACCGAACACCAGGTTATGTaGATGGCACCTTATACTTTT +
Preference number: 4 (lower is better)
Translates to: QSSFNLSAHSLLGIVAYTEHQVM*MAPYTF
Trigger: AAAAGTATAAGGTGCCATCCACATAACCTGGTGTTC...GGTATAAGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CCA 90 bp ACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGTGTGGCTTGACTGCTTaGATGAACATCTCATTTTTC +
Preference number: 4 (lower is better)
Translates to: TQNTLIILQCMLVSCDTRCGLTA*MNISFF
Trigger: GAAAAATGAGATGTTCATCCAAGCAGTCAAGCCACA...CCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp CATGCTGGGTTTCTGTGGCTTGACTGCTTGGATGAACATCTCATTTTTCAATCAACCAGGTTATGTGGATaGCACCTTATACTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: HAGFLWLDCLDEHLIFQSTRLCG*HLILFK
Trigger: TTTGAAAAGTATAAGGTGCCATCCACATAACCTGGT...TGATTGAAAAATGAGATGTTCATCCAAGCAGTCAAGCCACAGAAACCCAGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CCA 90 bp CAAAGCTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTATACCACCAGGTTATGTGGATaGCACCTTATACTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: QSSFNLSAHSLLGIVAYTTRLCG*HLILFK
Trigger: TTTGAAAAGTATAAGGTGCCATCCACATAACCTGGT...GGTATAAGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS CCA 90 bp CTGAGGGCCTGGGCTCCTTCTGCAATCGCCTCTGCTGTCCACCCGTaGGCGGGCACAAACTCAAGGGCTGCCGTCAGGATGCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: LRAWAPSAIASAVHP*AGTNSRAAVRMRCC
Trigger: GCAGCACCGCATCCTGACGGCAGCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAAGGAGCCCAGGCCCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565964.5
CDS CCA 90 bp CCCAGAGACTGGGCTCCTTCTGCAATCGCCTCTGCTGTCCACCCGTaGGCGGGCACAAACTCAAGGGCTGCCGTCAGGATGCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: PRDWAPSAIASAVHP*AGTNSRAAVRMRCC
Trigger: GCAGCACCGCATCCTGACGGCAGCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAAGGAGCCCAGTCTCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262507.11
ENST00000562426.5
ENST00000562734.5
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000567072.5
ENST00000568790.5
CDS-3UTR CAA 90 bp CAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGTGAGGCAGTTACGCGGCACCAGGGCTaGTCGGCAACGGGCCACGGG +
Preference number: 5 (lower is better)
Translates to: QAWNHTSVQQALVSGEAVTRHQG*SATGHG
Trigger: CCCGTGGCCCGTTGCCGACAAGCCCTGGTGCCGCGT...AACTGCCTCACCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS GCA 90 bp TGCACTGGAGAGACCCAGAGACTGGGCTCCTTCTGCAATCGCCTCTaGTGTCCACCCGTGGGCGGGCACAAACTCAAGGGCTGCCGTCAG +
Preference number: 5 (lower is better)
Translates to: CTGETQRLGSFCNRL*CPPVGGHKLKGCRQ
Trigger: CTGACGGCAGCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAAGGAGCCCAGTCTCTGGGTCTCTCCAGTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262507.11
ENST00000562426.5
ENST00000562734.5
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000567072.5
ENST00000568790.5
CDS GCA 90 bp CCCACCCTCACCTATACACACCTGGGCTCCTTCTGCAATCGCCTCTaGTGTCCACCCGTGGGCGGGCACAAACTCAAGGGCTGCCGTCAG +
Preference number: 5 (lower is better)
Translates to: PTLTYTHLGSFCNRL*CPPVGGHKLKGCRQ
Trigger: CTGACGGCAGCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAAGGAGCCCAGGTGTGTATAGGTGAGGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS CCA 90 bp ATACACACCTGGGCTCCTTCTGCAATCGCCTCTGCTGTCCACCCGTaGGCGGGCACAAACTCAAGGGCTGCCGTCAGGATGCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: IHTWAPSAIASAVHP*AGTNSRAAVRMRCC
Trigger: GCAGCACCGCATCCTGACGGCAGCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAAGGAGCCCAGGTGTGTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566388.5
ENST00000567480.1
CDS GCA 90 bp TCGGCGGGTGTACCAGTTAAACTGGGCTCCTTCTGCAATCGCCTCTaGTGTCCACCCGTGGGCGGGCACAAACTCAAGGGCTGCCGTCAG +
Preference number: 5 (lower is better)
Translates to: SAGVPVKLGSFCNRL*CPPVGGHKLKGCRQ
Trigger: CTGACGGCAGCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAAGGAGCCCAGTTTAACTGGTACACCCGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567933.5
CDS CCA 90 bp CAGTTAAACTGGGCTCCTTCTGCAATCGCCTCTGCTGTCCACCCGTaGGCGGGCACAAACTCAAGGGCTGCCGTCAGGATGCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: QLNWAPSAIASAVHP*AGTNSRAAVRMRCC
Trigger: GCAGCACCGCATCCTGACGGCAGCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAAGGAGCCCAGTTTAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567933.5
CDS GCA 90 bp CTGTCCACCCGTGGGCGGGCACAAACTCAAGGGCTGCCGTCAGGATaGGGTGCTGCAACTGCTCCTCACTTTCATAGTCCTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: LSTRGRAQTQGLPSG*GAATAPHFHSPPPP
Trigger: AGGAGGAGGAGGACTATGAAAGTGAGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262507.11
ENST00000562426.5
ENST00000562734.5
ENST00000563166.1
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000565964.5
ENST00000566388.5
ENST00000567072.5
ENST00000567480.1
ENST00000567933.5
ENST00000568790.5
CDS GCA 90 bp AGACCCAGAGACTATACACACCTGGGCTCCTTCTGCAATCGCCTCTaGTGTCCACCCGTGGGCGGGCACAAACTCAAGGGCTGCCGTCAG +
Preference number: 5 (lower is better)
Translates to: RPRDYTHLGSFCNRL*CPPVGGHKLKGCRQ
Trigger: CTGACGGCAGCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAAGGAGCCCAGGTGTGTATAGTCTCTGGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567480.1
CDS GCA 90 bp AATCGCCTCTGCTGTCCACCCGTGGGCGGGCACAAACTCAAGGGCTaGCGTCAGGATGCGGTGCTGCAACTGCTCCTCACTTTCATAGTC +
Preference number: 5 (lower is better)
Translates to: NRLCCPPVGGHKLKG*RQDAVLQLLLTFIV
Trigger: GACTATGAAAGTGAGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGCGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262507.11
ENST00000562426.5
ENST00000562734.5
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000565964.5
ENST00000566388.5
ENST00000567072.5
ENST00000567480.1
ENST00000567933.5
ENST00000568790.5
CDS GCA 90 bp TCACACCTCTGCTGTCCACCCGTGGGCGGGCACAAACTCAAGGGCTaGCGTCAGGATGCGGTGCTGCAACTGCTCCTCACTTTCATAGTC +
Preference number: 5 (lower is better)
Translates to: SHLCCPPVGGHKLKG*RQDAVLQLLLTFIV
Trigger: GACTATGAAAGTGAGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563166.1
CDS GCA 90 bp CATGAGGATGCTGAGGGCTCCGCCTGGCCCAACTGTACCAGCTTCTaGTCCTCTTCTAGCACACGTGTGAGCCGGGTATTGCACTGGGTC +
Preference number: 5 (lower is better)
Translates to: HEDAEGSAWPNCTSF*SSSSTRVSRVLHWV
Trigger: GACCCAGTGCAATACCCGGCTCACACGTGTGCTAGAAGAGGAGCAGAAGCTGGTACAGTTGGGCCAGGCGGAGCCCTCAGCATCCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS CCA 90 bp CCCGCTCTGCCTGGTGTGACTCCATCCTGGCTCATCTTGGTTAGGTaGCCCCACCCTCACCTATACACACCTGGGCTCCTTCTGCAATCG +
Preference number: 5 (lower is better)
Translates to: PALPGVTPSWLILVR*PHPHLYTPGLLLQS
Trigger: CGATTGCAGAAGGAGCCCAGGTGTGTATAGGTGAGGGTGGGGCCACCTAACCAAGATGAGCCAGGATGGAGTCACACCAGGCAGAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS-3UTR CAA 90 bp TGCTTGGCAGTGTGGCCCATGTTCATTGCATCATTAACCCGGTTTTCCAGGAAGACGCGGCACCAGGGCTaGTCGGCAACGGGCCACGGG +
Preference number: 5 (lower is better)
Translates to: CLAVWPMFIASLTRFSRKTRHQG*SATGHG
Trigger: CCCGTGGCCCGTTGCCGACAAGCCCTGGTGCCGCGT...CTTCCTGGAAAACCGGGTTAATGATGCAATGAACATGGGCCACACTGCCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS TCA 90 bp AGCATGGAAGGCACGCGGCACCAGGGCTTGTCGGCAACGGGCCACTaGAACAGAAACTGGTCAGTCAGGGACATTCAACAGAGAAGACCC +
Preference number: 5 (lower is better)
Translates to: SMEGTRHQGLSATGH*NRNWSVRDIQQRRP
Trigger: GGGTCTTCTCTGTTGAATGTCCCTGACTGACCAGTTTCTGTTTCAGTGGCCCGTTGCCGACAAGCCCTGGTGCCGCGTGCCTTCCATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567384.1
CDS CCA 90 bp CTGACTCTTCTAACCTCCTGCATGGATTCCTCCTCCCTGCAGACCTaGTGGCACACTCAGACCACTAGGAGAACCCCACCCAGGATGGGA +
Preference number: 5 (lower is better)
Translates to: LTLLTSCMDSSSLQT*WHTQTTRRTPPRMG
Trigger: TCCCATCCTGGGTGGGGTTCTCCTAGTGGTCTGAGTGTGCCACCAGGTCTGCAGGGAGGAGGAATCCATGCAGGAGGTTAGAAGAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562426.5
ENST00000567576.1
ENST00000568790.5
CDS-3UTR CAA 90 bp AATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTGGAACGCGGCACCAGGGCTaGTCGGCAACGGGCCACGGG +
Preference number: 5 (lower is better)
Translates to: NTLIILQCMLVSCDTRPGTRHQG*SATGHG
Trigger: CCCGTGGCCCGTTGCCGACAAGCCCTGGTGCCGCGT...TCCAGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563166.1
ENST00000567072.5
CDS-3UTR CAA 90 bp TTCAATCACACAGTTGCAGTGCAGAAAGGCATCAGGAGGCTTGGTCTGGTATTAACGCGGCACCAGGGCTaGTCGGCAACGGGCCACGGG +
Preference number: 5 (lower is better)
Translates to: FNHTVAVQKGIRRLGLVLTRHQG*SATGHG
Trigger: CCCGTGGCCCGTTGCCGACAAGCCCTGGTGCCGCGT...TAATACCAGACCAAGCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGATTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CAA 90 bp CATCATCACCAGCTCTGTTGTGTTGTAGATGGCAGCCAGCATGGCTCGGCGGGTCGTGTGAGCCGGGTATaGCACTGGGTCACAAAATGC +
Preference number: 5 (lower is better)
Translates to: HHHQLCCVVDGSQHGSAGRVSRV*HWVTKC
Trigger: GCATTTTGTGACCCAGTGCAATACCCGGCTCACACG...ACCCGCCGAGCCATGCTGGCTGCCATCTACAACACAACAGAGCTGGTGATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR CAA 90 bp GCACCCATGAGTCCTTGCACCAGTGCCTCTCCTGTGGACTTTACCTGCTTGGCAGTGGACTTTACCTGCTaGGCAGTGTGGCCCATGTTC +
Preference number: 5 (lower is better)
Translates to: APMSPCTSASPVDFTCLAVDFTC*AVWPMF
Trigger: GAACATGGGCCACACTGCCAAGCAGGTAAAGTCCAC...TGCCAAGCAGGTAAAGTCCACAGGAGAGGCACTGGTGCAAGGACTCATGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS-3UTR CAA 90 bp AGGCTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGAGGTGGCGTCAGACCTaGACTCTGGCTTGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: RLGLVLGTEEAAQSLTRTRWRQT*TLAWEP
Trigger: GGGCTCCCAAGCCAGAGTCAAGGTCTGACGCCACCT...CGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACCAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS TCA 90 bp GCTTGGATTGGCCTCCTGGGCATAGCTGGTAGGGCCCAAGTTCCCTaGTCCTTAGCTGCCACCCTGAGTAGTAATGCCATGGGACTTACT +
Preference number: 5 (lower is better)
Translates to: AWIGLLGIAGRAQVP*SLAATLSSNAMGLT
Trigger: AGTAAGTCCCATGGCATTACTACTCAGGGTGGCAGCTAAGGATCAGGGAACTTGGGCCCTACCAGCTATGCCCAGGAGGCCAATCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562734.5
ENST00000567480.1
CDS GCA 90 bp AGACCTGTCAAGTTCTTGAGCGTCACTGCTGCACCCATGAGTCCTTaGACCAGTGCCTCTCCTGTGGACTTTACCTGCTTGGCAGTGTGG +
Preference number: 5 (lower is better)
Translates to: RPVKFLSVTAAPMSP*TSASPVDFTCLAVW
Trigger: CCACACTGCCAAGCAGGTAAAGTCCACAGGAGAGGCACTGGTGCAAGGACTCATGGGTGCAGCAGTGACGCTCAAGAACTTGACAGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
ENST00000569980.1
CDS CCA 90 bp GGGCCCGGGGCCAGTGCTCAATGTATGGGATCAGCATTCTCAGTCTaGTTTCCACTGCATCCCTCAGGAACTGGTCTGTCTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: GPGASAQCMGSAFSV*FPLHPSGTGLSSSS
Trigger: AGAAGAGGAAGACAGACCAGTTCCTGAGGGATGCAGTGGAAACCAGACTGAGAATGCTGATCCCATACATTGAGCACTGGCCCCGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563391.1
ENST00000564655.5
CDS CCA 90 bp AGACCTGGTGGCACACTCAGACCACTAGGAGAACCCCACCCAGGATaGGATCCAGTACCCGGACCACTCACATTTCCAAGAACTGAGACA +
Preference number: 5 (lower is better)
Translates to: RPGGTLRPLGEPHPG*DPVPGPLTFPRTET
Trigger: TGTCTCAGTTCTTGGAAATGTGAGTGGTCCGGGTACTGGATCCCATCCTGGGTGGGGTTCTCCTAGTGGTCTGAGTGTGCCACCAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562426.5
ENST00000567576.1
ENST00000568790.5
CDS CCA 90 bp AGCAACCTTGCCCATTGTCCATGGGTAGATGCCCTGCAGCAAGCCTaGGATGGAAGATGCAACTCTGTCATCCCCTCAGTCTCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: SNLAHCPWVDALQQA*DGRCNSVIPSVSWR
Trigger: CCTCCAAGAGACTGAGGGGATGACAGAGTTGCATCTTCCATCCCAGGCTTGCTGCAGGGCATCTACCCATGGACAATGGGCAAGGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS-3UTR CAA 90 bp ACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGGCCGCCGCCGCCATTTaGGAAGCGGGCACGTCGCCC +
Preference number: 5 (lower is better)
Translates to: TQNTLIILQCMLVSCDTRAAAAI*EAGTSP
Trigger: GGGCGACGTGCCCGCTTCCAAAATGGCGGCGGCGGC...CCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262507.11
CDS-3UTR CAA 90 bp CCAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGCACCCATGAGTCCTaGCACCAGTGCCTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: PIPDQNGSIKCLVVSRWLCTHES*HQCLSC
Trigger: ACAGGAGAGGCACTGGTGCAAGGACTCATGGGTGCA...CAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS CCA 90 bp GTACCCGGGGCCAGTGCTCAATGTATGGGATCAGCATTCTCAGTCTaGTTTCCACTGCATCCCTCAGGAACTGGTCTGTCTTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: VPGASAQCMGSAFSV*FPLHPSGTGLSSSS
Trigger: GGAAGAGGAAGACAGACCAGTTCCTGAGGGATGCAGTGGAAACCAGACTGAGAATGCTGATCCCATACATTGAGCACTGGCCCCGGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562426.5
ENST00000562734.5
CDS-3UTR CAA 90 bp TCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGTGTGGACTTTACCTGCTaGGCAGTGTGGCCCATGTTC +
Preference number: 5 (lower is better)
Translates to: SLTRTVASNALWFPGGCGVDFTC*AVWPMF
Trigger: GAACATGGGCCACACTGCCAAGCAGGTAAAGTCCAC...ACCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCTGGTCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CAA 90 bp GGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGTGCACCCATGAGTCCTaGCACCAGTGCCTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: GTEEAAQSLTRTVASNALCTHES*HQCLSC
Trigger: ACAGGAGAGGCACTGGTGCAAGGACTCATGGGTGCA...CAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CAA 90 bp CATGTGACACCAGGCCTGGAATCACACCTCTGTCCAGCAGGCACTTGTCTCAGGCTGGGTTTCTGTGGCTaGACTGCTTGGATGAACATC +
Preference number: 5 (lower is better)
Translates to: HVTPGLESHLCPAGTCLRLGFCG*TAWMNI
Trigger: GATGTTCATCCAAGCAGTCAAGCCACAGAAACCCAG...CCTGAGACAAGTGCCTGCTGGACAGAGGTGTGATTCCAGGCCTGGTGTCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS TCA 90 bp CCTGGCCCAACTGTACCAGCTTCTGCTCCTCTTCTAGCACACGTGTaGGCCGGGTATTGCACTGGGTCACAAAATGCAGTATTAGCTCAC +
Preference number: 5 (lower is better)
Translates to: PGPTVPASAPLLAHV*AGYCTGSQNAVLAH
Trigger: GTGAGCTAATACTGCATTTTGTGACCCAGTGCAATACCCGGCTCACACGTGTGCTAGAAGAGGAGCAGAAGCTGGTACAGTTGGGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262507.11
ENST00000562734.5
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000567480.1
ENST00000567576.1
ENST00000568790.5
CDS GCA 90 bp GGGTCACAAAATGCAGTATTAGCTCACTGCCATCCTTCCCGAACATaGTGGCTGCTGCACTGGAGAGACCCAGAGACTATACACACCTGG +
Preference number: 5 (lower is better)
Translates to: GSQNAVLAHCHPSRT*WLLHWRDPETIHTW
Trigger: CCAGGTGTGTATAGTCTCTGGGTCTCTCCAGTGCAGCAGCCAGCATGTTCGGGAAGGATGGCAGTGAGCTAATACTGCATTTTGTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567480.1
CDS GCA 90 bp CATTGTCCATGGGTAGATGCCCTGCAGCAAGCCTGGGATGGAAGATaGAACTCTGTCATCCCCTCAGTCTCTTGGAGGATGGTATCTTGC +
Preference number: 5 (lower is better)
Translates to: HCPWVDALQQAWDGR*NSVIPSVSWRMVSC
Trigger: GCAAGATACCATCCTCCAAGAGACTGAGGGGATGACAGAGTTGCATCTTCCATCCCAGGCTTGCTGCAGGGCATCTACCCATGGACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS CCA 90 bp GTACCCGGGGCCAGTGCTCAATGTATGGGATCAGCATTCTCAGTCTaGTTTCCACTGCATCCCTCAGGAACTGGTCTGTCTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: VPGASAQCMGSAFSV*FPLHPSGTGLSSSS
Trigger: AGAAGAGGAAGACAGACCAGTTCCTGAGGGATGCAGTGGAAACCAGACTGAGAATGCTGATCCCATACATTGAGCACTGGCCCCGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567576.1
ENST00000568790.5
CDS-3UTR CAA 90 bp GGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCAAATGCCTTGCGTGTGAGCCGGGTATaGCACTGGGTCACAAAATGC +
Preference number: 5 (lower is better)
Translates to: GTEEAAQSLTRTVASNALRVSRV*HWVTKC
Trigger: GCATTTTGTGACCCAGTGCAATACCCGGCTCACACG...CAAGGCATTTGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CAA 90 bp CATGAGTCCTTGCACCAGTGCCTCTCCTGTGGACTTTACCTGCTTGGCAGTGTGTCATCACCAGCTCTGTaGTGTTGTAGATGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: HESLHQCLSCGLYLLGSVSSPAL*CCRWQP
Trigger: TGGCTGCCATCTACAACACAACAGAGCTGGTGATGA...CACACTGCCAAGCAGGTAAAGTCCACAGGAGAGGCACTGGTGCAAGGACTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS GCA 90 bp TCTTCTAGCACACGTGTGAGCCGGGTATTGCACTGGGTCACAAAATaGAGTATTAGCTCACTGCCATCCTTCCCGAACATGCTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SSSTRVSRVLHWVTK*SISSLPSFPNMLAA
Trigger: AGCAGCCAGCATGTTCGGGAAGGATGGCAGTGAGCTAATACTGCATTTTGTGACCCAGTGCAATACCCGGCTCACACGTGTGCTAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262507.11
ENST00000562426.5
ENST00000562734.5
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000567072.5
ENST00000567480.1
ENST00000567576.1
ENST00000568790.5
CDS GCA 90 bp ATTGTTGCTCTGGGGCCTGGATATAGACTTGGTACCCGGGGCCAGTaGTCAATGTATGGGATCAGCATTCTCAGTCTGGTTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: IVALGPGYRLGTRGQ*SMYGISILSLVSTA
Trigger: TGCAGTGGAAACCAGACTGAGAATGCTGATCCCATACATTGAGCACTGGCCCCGGGTACCAAGTCTATATCCAGGCCCCAGAGCAACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562426.5
ENST00000562734.5
ENST00000567576.1
ENST00000568790.5
CDS-3UTR CAA 90 bp CTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGTGGACTTTACCTGCTaGGCAGTGTGGCCCATGTTC +
Preference number: 5 (lower is better)
Translates to: LGLVLGTEEAAQSLTRTVVDFTC*AVWPMF
Trigger: GAACATGGGCCACACTGCCAAGCAGGTAAAGTCCAC...TACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CAA 90 bp CTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTAGCATCACTGTCCAGCAGGCACTaGTCTCAGGTGAGGCAGTTT +
Preference number: 5 (lower is better)
Translates to: LVLGTEEAAQSLTRTVASLSSRH*SQVRQF
Trigger: AAACTGCCTCACCTGAGACAAGTGCCTGCTGGACAG...TGATGCTACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS CCA 90 bp TCTCTTCTAGGCATTGTAGCTTATACCCCTTCCTCTCACCGACGCTaGTTTAGACCTGTCAAGTTCTTGAGCGTCACTGCTGCACCCATG +
Preference number: 5 (lower is better)
Translates to: SLLGIVAYTPSSHRR*FRPVKFLSVTAAPM
Trigger: CATGGGTGCAGCAGTGACGCTCAAGAACTTGACAGGTCTAAACCAGCGTCGGTGAGAGGAAGGGGTATAAGCTACAATGCCTAGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
ENST00000569980.1
CDS-3UTR CAA 90 bp CATGCTGGGTTTCTGTGGCTTGACTGCTTGGATGAACATCTCATTTTTCAATCAAGGTGGCGTCAGACCTaGACTCTGGCTTGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: HAGFLWLDCLDEHLIFQSRWRQT*TLAWEP
Trigger: GGGCTCCCAAGCCAGAGTCAAGGTCTGACGCCACCT...TGATTGAAAAATGAGATGTTCATCCAAGCAGTCAAGCCACAGAAACCCAGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS CCA 90 bp GGGATGGAAGATGCAACTCTGTCATCCCCTCAGTCTCTTGGAGGATaGTATCTTGCTATGCTGGAGGATTCTCTACAACATGGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: GMEDATLSSPQSLGG*YLAMLEDSLQHGLN
Trigger: GTTCAGGCCATGTTGTAGAGAATCCTCCAGCATAGCAAGATACCATCCTCCAAGAGACTGAGGGGATGACAGAGTTGCATCTTCCATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS CCA 90 bp CAAGCCTGGGATGGAAGATGCAACTCTGTCATCCCCTCAGTCTCTTaGAGGATGGTATCTTGCTATGCTGGAGGATTCTCTACAACATGG +
Preference number: 5 (lower is better)
Translates to: QAWDGRCNSVIPSVS*RMVSCYAGGFSTTW
Trigger: CCATGTTGTAGAGAATCCTCCAGCATAGCAAGATACCATCCTCCAAGAGACTGAGGGGATGACAGAGTTGCATCTTCCATCCCAGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS-3UTR CAA 90 bp CTCAGGAGTCCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTGTAGCATCAAATGCCTaGTGGTTTCCAGGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: LRSPLVCSREHQVMWMAPVASNA*WFPGGC
Trigger: ACAGCCACCTGGAAACCACAAGGCATTTGATGCTAC...AGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGGACTCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS GCA 90 bp AGATGCAACTCTGTCATCCCCTCAGTCTCTTGGAGGATGGTATCTTaGTATGCTGGAGGATTCTCTACAACATGGCCTGAACATGAGCCT +
Preference number: 5 (lower is better)
Translates to: RCNSVIPSVSWRMVS*YAGGFSTTWPEHEP
Trigger: AGGCTCATGTTCAGGCCATGTTGTAGAGAATCCTCCAGCATAGCAAGATACCATCCTCCAAGAGACTGAGGGGATGACAGAGTTGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS-3UTR CAA 90 bp CAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTGTGGACTTTACCTGCTaGGCAGTGTGGCCCATGTTC +
Preference number: 5 (lower is better)
Translates to: QNTLIILQCMLVSCDTRPVDFTC*AVWPMF
Trigger: GAACATGGGCCACACTGCCAAGCAGGTAAAGTCCAC...AGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CAA 90 bp CCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTTATACTTTTTGCACCCATGAGTCCTaGCACCAGTGCCTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: PLVCSREHQVMWMAPYTFCTHES*HQCLSC
Trigger: ACAGGAGAGGCACTGGTGCAAGGACTCATGGGTGCA...AAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CAA 90 bp CAAAGCTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTATACCCGTGTGAGCCGGGTATaGCACTGGGTCACAAAATGC +
Preference number: 5 (lower is better)
Translates to: QSSFNLSAHSLLGIVAYTRVSRV*HWVTKC
Trigger: GCATTTTGTGACCCAGTGCAATACCCGGCTCACACG...GGTATAAGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CAA 90 bp ACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCTGTCCAGCAGGCACTaGTCTCAGGTGAGGCAGTTT +
Preference number: 5 (lower is better)
Translates to: TQNTLIILQCMLVSCDTRLSSRH*SQVRQF
Trigger: AAACTGCCTCACCTGAGACAAGTGCCTGCTGGACAG...CCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CAA 90 bp CAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCCTTCATCACCAGCTCTGTaGTGTTGTAGATGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: QNTLIILQCMLVSCDTRPSSPAL*CCRWQP
Trigger: TGGCTGCCATCTACAACACAACAGAGCTGGTGATGA...AGGCCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CAA 90 bp ACATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGCATCAGGAGGCTTGTCATCACCAGCTCTGTaGTGTTGTAGATGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: TSHFSITQLQCRKASGGLSSPAL*CCRWQP
Trigger: TGGCTGCCATCTACAACACAACAGAGCTGGTGATGA...CAAGCCTCCTGATGCCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CAA 90 bp AGAACGGTAGCATCAAATGCCTTGTGGTTTCCAGGTGGCTGTGGTAGTGACTCATTTTCAATCACACAGTaGCAGTGCAGAAAGGCATCA +
Preference number: 5 (lower is better)
Translates to: RTVASNALWFPGGCGSDSFSITQ*QCRKAS
Trigger: TGATGCCTTTCTGCACTGCAACTGTGTGATTGAAAA...TGAGTCACTACCACAGCCACCTGGAAACCACAAGGCATTTGATGCTACCGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CAA 90 bp CTTGGTCTGGTATTAGGAACTGAAGAAGCAGCCCAATCCCTGACCAGAACGGTATTTTCAATCACACAGTaGCAGTGCAGAAAGGCATCA +
Preference number: 5 (lower is better)
Translates to: LGLVLGTEEAAQSLTRTVFSITQ*QCRKAS
Trigger: TGATGCCTTTCTGCACTGCAACTGTGTGATTGAAAA...TACCGTTCTGGTCAGGGATTGGGCTGCTTCTTCAGTTCCTAATACCAGACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CAA 90 bp GACTGCTTGGATGAACATCTCATTTTTCAATCACACAGTTGCAGTGCAGAAAGGGTAGCATCAAATGCCTaGTGGTTTCCAGGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: DCLDEHLIFQSHSCSAERVASNA*WFPGGC
Trigger: ACAGCCACCTGGAAACCACAAGGCATTTGATGCTAC...CCTTTCTGCACTGCAACTGTGTGATTGAAAAATGAGATGTTCATCCAAGCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CAA 90 bp CCTTTAGTGTGTTCTCGTGAACACCAGGTTATGTGGATGGCACCTTATACTTTTGTAGCATCAAATGCCTaGTGGTTTCCAGGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: PLVCSREHQVMWMAPYTFVASNA*WFPGGC
Trigger: ACAGCCACCTGGAAACCACAAGGCATTTGATGCTAC...AAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCACGAGAACACACTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS-3UTR CAA 90 bp ACTCAAAATACACTAATAATCCTGCAATGCATGCTGGTGTCATGTGACACCAGGCTGGGTTTCTGTGGCTaGACTGCTTGGATGAACATC +
Preference number: 5 (lower is better)
Translates to: TQNTLIILQCMLVSCDTRLGFCG*TAWMNI
Trigger: GATGTTCATCCAAGCAGTCAAGCCACAGAAACCCAG...CCTGGTGTCACATGACACCAGCATGCATTGCAGGATTATTAGTGTATTTTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262507.11
ENST00000567072.5
CDS-3UTR CAA 90 bp ACTTTTCAAAGCTCTTTCAATCTGTCCGCTCATTCTCTTCTAGGCATTGTAGCTTCATCACCAGCTCTGTaGTGTTGTAGATGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: TFQSSFNLSAHSLLGIVASSPAL*CCRWQP
Trigger: TGGCTGCCATCTACAACACAACAGAGCTGGTGATGA...AGCTACAATGCCTAGAAGAGAATGAGCGGACAGATTGAAAGAGCTTTGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
CDS CCA 90 bp TTTTATATTTGTTTGTATTGTTCAGTTTTCACAATGAGCCTACAGTaGAGTCAGAGCACCCACATTTCACTAATGAGACTTCTGTTACCA +
Preference number: 5 (lower is better)
Translates to: FYICLYCSVFTMSLQ*SQSTHISLMRLLLP
Trigger: TGGTAACAGAAGTCTCATTAGTGAAATGTGGGTGCTCTGACTCCACTGTAGGCTCATTGTGAAAACTGAACAATACAAACAAATATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS GCA 72 bp GCTTGTCGGCAACGGGCCACGGGCAGGCATCGCAGCTaGAGGAGCCTCCAGCCCGCCCGGCCAAGCGCACCA +
Preference number: 6 (lower is better)
Translates to: ACRQRATGRHRS*RSLQPARPSAP
Trigger: TGGTGCGCTTGGCCGGGCGGGCTGGAGGCTCCTGCAGCTGCGATGCCTGCCCGTGGCCCGTTGCCGACAAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262507.11
ENST00000562426.5
ENST00000562734.5
ENST00000564115.5
ENST00000565964.5
ENST00000566388.5
ENST00000567072.5
ENST00000567933.5
ENST00000568790.5
CDS CCA 72 bp GGCCAAGCGCACCAGATACCGCCGCCGCCGCCATTTTaGAAGCGGGCACGTCGCCCACGGCGACGCGACCGG +
Preference number: 6 (lower is better)
Translates to: GQAHQIPPPPPF*KRARRPRRRDR
Trigger: CCGGTCGCGTCGCCGTGGGCGACGTGCCCGCTTCCAAAATGGCGGCGGCGGCGGTATCTGGTGCGCTTGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565964.5
ENST00000566388.5
CDS CAA 72 bp CGGCCAAGCGCACCAGATACCGCCGCCGCCGCCATTTaGGAAGCGGGCACGTCGCCCACGGCGACGCGACCG +
Preference number: 6 (lower is better)
Translates to: RPSAPDTAAAAI*EAGTSPTATRP
Trigger: CGGTCGCGTCGCCGTGGGCGACGTGCCCGCTTCCAAAATGGCGGCGGCGGCGGTATCTGGTGCGCTTGGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565964.5
ENST00000566388.5
CDS GCA 72 bp GTCGGCAACGGGCCACCCGAGCCCTCTCTGAGGCTCTaGCAACTCCATGAAATGGGGGTGACAGGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: VGNGPPEPSLRL*QLHEMGVTGPA
Trigger: GGCAGGGCCTGTCACCCCCATTTCATGGAGTTGGCAGAGCCTCAGAGAGGGCTCGGGTGGCCCGTTGCCGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563391.1
CDS TCA 72 bp ATGCTGGTGAGCAGGCTCAGGCTGGACGGGATGTTGTaGGGGAGCATGAGGATGCTGAGGGCCCGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: MLVSRLRLDGML*GSMRMLRARGQ
Trigger: CTGGCCCCGGGCCCTCAGCATCCTCATGCTCCCTCACAACATCCCGTCCAGCCTGAGCCTGCTCACCAGCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262507.11
ENST00000563391.1
ENST00000564655.5
CDS TCA 72 bp GCCACCCGAGCCCTCTCTGAGGCTCTGCCAACTCCATaGAATGGGGGTGACAGGCCCTGCCCCGCTGCATCT +
Preference number: 6 (lower is better)
Translates to: ATRALSEALPTP*NGGDRPCPAAS
Trigger: AGATGCAGCGGGGCAGGGCCTGTCACCCCCATTTCATGGAGTTGGCAGAGCCTCAGAGAGGGCTCGGGTGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563391.1
CDS GCA 72 bp GATGCTGAGGGCCTGGGCTCCTTCTGCAATCGCCTCTaGTGTCCACCCGTGGGCGGGCACAAACTCAAGGGC +
Preference number: 6 (lower is better)
Translates to: DAEGLGSFCNRL*CPPVGGHKLKG
Trigger: GCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAAGGAGCCCAGGCCCTCAGCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565964.5
CDS GCA 72 bp TGCTGTCCACCCGTGGGCGGGCACAAACTCAAGGGCTaGCGTCAGGATGCGGTGCTGCAACTGCTCCTCACT +
Preference number: 6 (lower is better)
Translates to: CCPPVGGHKLKG*RQDAVLQLLLT
Trigger: AGTGAGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262507.11
ENST00000562426.5
ENST00000562734.5
ENST00000563166.1
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000565964.5
ENST00000566388.5
ENST00000567072.5
ENST00000567480.1
ENST00000567933.5
ENST00000568790.5
CDS GCA 72 bp GAGACCCAGAGACTGGGCTCCTTCTGCAATCGCCTCTaGTGTCCACCCGTGGGCGGGCACAAACTCAAGGGC +
Preference number: 6 (lower is better)
Translates to: ETQRLGSFCNRL*CPPVGGHKLKG
Trigger: GCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAAGGAGCCCAGTCTCTGGGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262507.11
ENST00000562426.5
ENST00000562734.5
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000567072.5
ENST00000568790.5
CDS CCA 72 bp TGGGCTCCTTCTGCAATCGCCTCTGCTGTCCACCCGTaGGCGGGCACAAACTCAAGGGCTGCCGTCAGGATG +
Preference number: 6 (lower is better)
Translates to: WAPSAIASAVHP*AGTNSRAAVRM
Trigger: CATCCTGACGGCAGCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAAGGAGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262507.11
ENST00000562426.5
ENST00000562734.5
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000565964.5
ENST00000566388.5
ENST00000567072.5
ENST00000567480.1
ENST00000567933.5
ENST00000568790.5
CDS GCA 72 bp GCTGAGGGCTCCGCCTGGCCCAACTGTACCAGCTTCTaGTCCTCTTCTAGCACACGTGTGAGCCGGGTATTG +
Preference number: 6 (lower is better)
Translates to: AEGSAWPNCTSF*SSSSTRVSRVL
Trigger: CAATACCCGGCTCACACGTGTGCTAGAAGAGGAGCAGAAGCTGGTACAGTTGGGCCAGGCGGAGCCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564115.5
CDS GCA 72 bp GACTATACACACCTGGGCTCCTTCTGCAATCGCCTCTaGTGTCCACCCGTGGGCGGGCACAAACTCAAGGGC +
Preference number: 6 (lower is better)
Translates to: DYTHLGSFCNRL*CPPVGGHKLKG
Trigger: GCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAAGGAGCCCAGGTGTGTATAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567480.1
CDS GCA 72 bp ACCTATACACACCTGGGCTCCTTCTGCAATCGCCTCTaGTGTCCACCCGTGGGCGGGCACAAACTCAAGGGC +
Preference number: 6 (lower is better)
Translates to: TYTHLGSFCNRL*CPPVGGHKLKG
Trigger: GCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAAGGAGCCCAGGTGTGTATAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS TCA 72 bp CCCCAGCGTAATGCCACATGTCATCCACCATGCTGGTaGGCAGGCTCAGGCTGGACGGGATGTTGTGAGGGA +
Preference number: 6 (lower is better)
Translates to: PQRNATCHPPCW*AGSGWTGCCEG
Trigger: TCCCTCACAACATCCCGTCCAGCCTGAGCCTGCTCACCAGCATGGTGGATGACATGTGGCATTACGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262507.11
ENST00000564115.5
ENST00000564655.5
ENST00000565964.5
ENST00000567072.5
ENST00000569980.1
CDS TCA 72 bp GGCACGCGGCACCAGGGCTTGTCGGCAACGGGCCACTaGAACAGAAACTGGTCAGTCAGGGACATTCAACAG +
Preference number: 6 (lower is better)
Translates to: GTRHQGLSATGH*NRNWSVRDIQQ
Trigger: CTGTTGAATGTCCCTGACTGACCAGTTTCTGTTTCAGTGGCCCGTTGCCGACAAGCCCTGGTGCCGCGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567384.1
CDS GCA 72 bp CGTGGGCGGGCACAAACTCAAGGGCTGCCGTCAGGATaGGGTGCTGCAACTGCTCCTCACTTTCATAGTCCT +
Preference number: 6 (lower is better)
Translates to: RGRAQTQGLPSG*GAATAPHFHSP
Trigger: AGGACTATGAAAGTGAGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCCTTGAGTTTGTGCCCGCCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262507.11
ENST00000562426.5
ENST00000562734.5
ENST00000563166.1
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000565964.5
ENST00000566388.5
ENST00000567072.5
ENST00000567480.1
ENST00000567933.5
ENST00000568790.5
CDS GCA 72 bp GTACCAGTTAAACTGGGCTCCTTCTGCAATCGCCTCTaGTGTCCACCCGTGGGCGGGCACAAACTCAAGGGC +
Preference number: 6 (lower is better)
Translates to: VPVKLGSFCNRL*CPPVGGHKLKG
Trigger: GCCCTTGAGTTTGTGCCCGCCCACGGGTGGACAGCAGAGGCGATTGCAGAAGGAGCCCAGTTTAACTGGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567933.5
CDS CCA 72 bp CACTGCCATCCTTCCCGAACATGCTGGCTGCTGCACTaGAGAGACCCAGAGACTGGGCTCCTTCTGCAATCG +
Preference number: 6 (lower is better)
Translates to: HCHPSRTCWLLH*RDPETGLLLQS
Trigger: CGATTGCAGAAGGAGCCCAGTCTCTGGGTCTCTCCAGTGCAGCAGCCAGCATGTTCGGGAAGGATGGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262507.11
ENST00000562426.5
ENST00000562734.5
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000567072.5
ENST00000568790.5
CDS CCA 72 bp CTAACCTCCTGCATGGATTCCTCCTCCCTGCAGACCTaGTGGCACACTCAGACCACTAGGAGAACCCCACCC +
Preference number: 6 (lower is better)
Translates to: LTSCMDSSSLQT*WHTQTTRRTPP
Trigger: GGGTGGGGTTCTCCTAGTGGTCTGAGTGTGCCACCAGGTCTGCAGGGAGGAGGAATCCATGCAGGAGGTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562426.5
ENST00000567576.1
ENST00000568790.5
CDS TCA 72 bp GGCCTCCTGGGCATAGCTGGTAGGGCCCAAGTTCCCTaGTCCTTAGCTGCCACCCTGAGTAGTAATGCCATG +
Preference number: 6 (lower is better)
Translates to: GLLGIAGRAQVP*SLAATLSSNAM
Trigger: CATGGCATTACTACTCAGGGTGGCAGCTAAGGATCAGGGAACTTGGGCCCTACCAGCTATGCCCAGGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562734.5
ENST00000567480.1
CDS GCA 72 bp GAGCGTCACTGCTGCACCCATGAGTCCTTGCACCAGTaGCTCTCCTGTGGACTTTACCTGCTTGGCAGTGTG +
Preference number: 6 (lower is better)
Translates to: ERHCCTHESLHQ*LSCGLYLLGSV
Trigger: CACACTGCCAAGCAGGTAAAGTCCACAGGAGAGGCACTGGTGCAAGGACTCATGGGTGCAGCAGTGACGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
ENST00000569980.1
CDS CCA 72 bp CACTGCCATCCTTCCCGAACATGCTGGCTGCTGCACTaGAGAGACCCAGAGACTATACACACCTGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: HCHPSRTCWLLH*RDPETIHTWAP
Trigger: AGGAGCCCAGGTGTGTATAGTCTCTGGGTCTCTCCAGTGCAGCAGCCAGCATGTTCGGGAAGGATGGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567480.1
CDS GCA 72 bp TTTCAGTCCCATCACAGCAGCAGGGCTGCCCAATGCTaGTCTCTTTGGGTTCTGCTTGGATTGGCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: FQSHHSSRAAQC*SLWVLLGLASW
Trigger: CCAGGAGGCCAATCCAAGCAGAACCCAAAGAGAGCAGCATTGGGCAGCCCTGCTGCTGTGATGGGACTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562734.5
CDS CCA 72 bp GGCACACTCAGACCACTAGGAGAACCCCACCCAGGATaGGATCCAGTACCCGGACCACTCACATTTCCAAGA +
Preference number: 6 (lower is better)
Translates to: GTLRPLGEPHPG*DPVPGPLTFPR
Trigger: TCTTGGAAATGTGAGTGGTCCGGGTACTGGATCCCATCCTGGGTGGGGTTCTCCTAGTGGTCTGAGTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562426.5
ENST00000567576.1
ENST00000568790.5
CDS CCA 72 bp GCCCATTGTCCATGGGTAGATGCCCTGCAGCAAGCCTaGGATGGAAGATGCAACTCTGTCATCCCCTCAGTC +
Preference number: 6 (lower is better)
Translates to: AHCPWVDALQQA*DGRCNSVIPSV
Trigger: GACTGAGGGGATGACAGAGTTGCATCTTCCATCCCAGGCTTGCTGCAGGGCATCTACCCATGGACAATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS GCA 72 bp AAGTTCTTGAGCGTCACTGCTGCACCCATGAGTCCTTaGACCAGTGCCTCTCCTGTGGACTTTACCTGCTTG +
Preference number: 6 (lower is better)
Translates to: KFLSVTAAPMSP*TSASPVDFTCL
Trigger: CAAGCAGGTAAAGTCCACAGGAGAGGCACTGGTGCAAGGACTCATGGGTGCAGCAGTGACGCTCAAGAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
ENST00000569980.1
CDS GCA 72 bp CTGGGGCCTGGATATAGACTTGGTACCCGGGGCCAGTaGTCAATGTATGGGATCAGCATTCTCAGTCTGGTT +
Preference number: 6 (lower is better)
Translates to: LGPGYRLGTRGQ*SMYGISILSLV
Trigger: AACCAGACTGAGAATGCTGATCCCATACATTGAGCACTGGCCCCGGGTACCAAGTCTATATCCAGGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562426.5
ENST00000562734.5
ENST00000567576.1
ENST00000568790.5
CDS GCA 72 bp GTAAAGCAGCAACCTTGCCCATTGTCCATGGGTAGATaGCCTGCAGCAAGCCTGGGATGGAAGATGCAACTC +
Preference number: 6 (lower is better)
Translates to: VKQQPCPLSMGR*PAASLGWKMQL
Trigger: GAGTTGCATCTTCCATCCCAGGCTTGCTGCAGGGCATCTACCCATGGACAATGGGCAAGGTTGCTGCTTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS CCA 72 bp TTGTCCATGGGTAGATGCCCTGCAGCAAGCCTGGGATaGAAGATGCAACTCTGTCATCCCCTCAGTCTCTTG +
Preference number: 6 (lower is better)
Translates to: LSMGRCPAASLG*KMQLCHPLSLL
Trigger: CAAGAGACTGAGGGGATGACAGAGTTGCATCTTCCATCCCAGGCTTGCTGCAGGGCATCTACCCATGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS CAA 72 bp CAAGTTCTTGAGCGTCACTGCTGCACCCATGAGTCCTaGCACCAGTGCCTCTCCTGTGGACTTTACCTGCTT +
Preference number: 6 (lower is better)
Translates to: QVLERHCCTHES*HQCLSCGLYLL
Trigger: AAGCAGGTAAAGTCCACAGGAGAGGCACTGGTGCAAGGACTCATGGGTGCAGCAGTGACGCTCAAGAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
ENST00000569980.1
CDS CAA 90 bp AGGGCCAGCTTCTGCTCCTCTTCTAGCACACGTGTGAGCCGGGTATaGCACTGGGTCACAAAATGCAGTATTAGCTCACTGCCATCCTTC +
Preference number: 6 (lower is better)
Translates to: RASFCSSSSTRVSRV*HWVTKCSISSLPSF
Trigger: GAAGGATGGCAGTGAGCTAATACTGCATTTTGTGACCCAGTGCAATACCCGGCTCACACGTGTGCTAGAAGAGGAGCAGAAGCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567072.5
CDS CAA 90 bp TGTACCAGCTTCTGCTCCTCTTCTAGCACACGTGTGAGCCGGGTATaGCACTGGGTCACAAAATGCAGTATTAGCTCACTGCCATCCTTC +
Preference number: 6 (lower is better)
Translates to: CTSFCSSSSTRVSRV*HWVTKCSISSLPSF
Trigger: GAAGGATGGCAGTGAGCTAATACTGCATTTTGTGACCCAGTGCAATACCCGGCTCACACGTGTGCTAGAAGAGGAGCAGAAGCTGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262507.11
ENST00000562734.5
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000567480.1
ENST00000567576.1
ENST00000568790.5
CDS CAA 90 bp TCTTCCAGCTTCTGCTCCTCTTCTAGCACACGTGTGAGCCGGGTATaGCACTGGGTCACAAAATGCAGTATTAGCTCACTGCCATCCTTC +
Preference number: 6 (lower is better)
Translates to: SSSFCSSSSTRVSRV*HWVTKCSISSLPSF
Trigger: GAAGGATGGCAGTGAGCTAATACTGCATTTTGTGACCCAGTGCAATACCCGGCTCACACGTGTGCTAGAAGAGGAGCAGAAGCTGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562426.5
CDS TCA 72 bp ACTGTACCAGCTTCTGCTCCTCTTCTAGCACACGTGTaGGCCGGGTATTGCACTGGGTCACAAAATGCAGTA +
Preference number: 6 (lower is better)
Translates to: TVPASAPLLAHV*AGYCTGSQNAV
Trigger: TACTGCATTTTGTGACCCAGTGCAATACCCGGCTCACACGTGTGCTAGAAGAGGAGCAGAAGCTGGTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262507.11
ENST00000562734.5
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000567480.1
ENST00000567576.1
ENST00000568790.5
CDS GCA 72 bp TATTGCACTGGGTCACAAAATGCAGTATTAGCTCACTaGCATCCTTCCCGAACATGCTGGCTGCTGCACTGG +
Preference number: 6 (lower is better)
Translates to: YCTGSQNAVLAH*HPSRTCWLLHW
Trigger: CCAGTGCAGCAGCCAGCATGTTCGGGAAGGATGGCAGTGAGCTAATACTGCATTTTGTGACCCAGTGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262507.11
ENST00000562426.5
ENST00000562734.5
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000567072.5
ENST00000567480.1
ENST00000567576.1
ENST00000568790.5
CDS GCA 72 bp ACACGTGTGAGCCGGGTATTGCACTGGGTCACAAAATaGAGTATTAGCTCACTGCCATCCTTCCCGAACATG +
Preference number: 6 (lower is better)
Translates to: TRVSRVLHWVTK*SISSLPSFPNM
Trigger: CATGTTCGGGAAGGATGGCAGTGAGCTAATACTGCATTTTGTGACCCAGTGCAATACCCGGCTCACACGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262507.11
ENST00000562426.5
ENST00000562734.5
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000567072.5
ENST00000567480.1
ENST00000567576.1
ENST00000568790.5
CDS CCA 72 bp GCCAGTGCTCAATGTATGGGATCAGCATTCTCAGTCTaGTTTCCACTGCATCCCTCAGGAACTGGTCTGTCT +
Preference number: 6 (lower is better)
Translates to: ASAQCMGSAFSV*FPLHPSGTGLS
Trigger: AGACAGACCAGTTCCTGAGGGATGCAGTGGAAACCAGACTGAGAATGCTGATCCCATACATTGAGCACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262507.11
ENST00000562426.5
ENST00000562734.5
ENST00000563391.1
ENST00000564655.5
ENST00000567576.1
ENST00000568790.5
CDS CCA 72 bp GGCATTGTAGCTTATACCCCTTCCTCTCACCGACGCTaGTTTAGACCTGTCAAGTTCTTGAGCGTCACTGCT +
Preference number: 6 (lower is better)
Translates to: GIVAYTPSSHRR*FRPVKFLSVTA
Trigger: AGCAGTGACGCTCAAGAACTTGACAGGTCTAAACCAGCGTCGGTGAGAGGAAGGGGTATAAGCTACAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262507.11
ENST00000567072.5
ENST00000567933.5
ENST00000569980.1
CDS CAA 90 bp GCAAGCCTGGGATGGAAGATGCAACTCTGTCATCCCCTCAGTCTCTaGGAGGATGGTATCTTGCTATGCTGGAGGATTCTCTACAACATG +
Preference number: 6 (lower is better)
Translates to: ASLGWKMQLCHPLSL*EDGILLCWRILYNM
Trigger: CATGTTGTAGAGAATCCTCCAGCATAGCAAGATACCATCCTCCAAGAGACTGAGGGGATGACAGAGTTGCATCTTCCATCCCAGGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS TCA 72 bp GGATCCAGTACCCGGACCACTCACATTTCCAAGAACTaGGACACAGATGGCTCAGTCACTCTCTTTGGTATG +
Preference number: 6 (lower is better)
Translates to: GSSTRTTHISKN*DTDGSVTLFGM
Trigger: CATACCAAAGAGAGTGACTGAGCCATCTGTGTCTCAGTTCTTGGAAATGTGAGTGGTCCGGGTACTGGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562426.5
ENST00000567576.1
ENST00000568790.5
CDS CAA 72 bp TTCTGCTCCTCTTCTAGCACACGTGTGAGCCGGGTATaGCACTGGGTCACAAAATGCAGTATTAGCTCACTG +
Preference number: 6 (lower is better)
Translates to: FCSSSSTRVSRV*HWVTKCSISSL
Trigger: CAGTGAGCTAATACTGCATTTTGTGACCCAGTGCAATACCCGGCTCACACGTGTGCTAGAAGAGGAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262507.11
ENST00000562426.5
ENST00000562734.5
ENST00000563391.1
ENST00000564115.5
ENST00000564655.5
ENST00000567072.5
ENST00000567480.1
ENST00000567576.1
ENST00000568790.5
CDS CAA 72 bp TTAGGATTATTGTTGCTCTGGGGCCTGGATATAGACTaGGTACCCGGGGCCAGTGCTCAATGTATGGGATCA +
Preference number: 6 (lower is better)
Translates to: LGLLLLWGLDID*VPGASAQCMGS
Trigger: TGATCCCATACATTGAGCACTGGCCCCGGGTACCAAGTCTATATCCAGGCCCCAGAGCAACAATAATCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562426.5
ENST00000562734.5
ENST00000567576.1
ENST00000568790.5
CDS CAA 72 bp GGATGGAAGATGCAACTCTGTCATCCCCTCAGTCTCTaGGAGGATGGTATCTTGCTATGCTGGAGGATTCTC +
Preference number: 6 (lower is better)
Translates to: GWKMQLCHPLSL*EDGILLCWRIL
Trigger: GAGAATCCTCCAGCATAGCAAGATACCATCCTCCAAGAGACTGAGGGGATGACAGAGTTGCATCTTCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS GCA 72 bp TCTGTCATCCCCTCAGTCTCTTGGAGGATGGTATCTTaGTATGCTGGAGGATTCTCTACAACATGGCCTGAA +
Preference number: 6 (lower is better)
Translates to: SVIPSVSWRMVS*YAGGFSTTWPE
Trigger: TTCAGGCCATGTTGTAGAGAATCCTCCAGCATAGCAAGATACCATCCTCCAAGAGACTGAGGGGATGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS CCA 72 bp GATGGAAGATGCAACTCTGTCATCCCCTCAGTCTCTTaGAGGATGGTATCTTGCTATGCTGGAGGATTCTCT +
Preference number: 6 (lower is better)
Translates to: DGRCNSVIPSVS*RMVSCYAGGFS
Trigger: AGAGAATCCTCCAGCATAGCAAGATACCATCCTCCAAGAGACTGAGGGGATGACAGAGTTGCATCTTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS CAA 90 bp AGGAAAAGCAGGCCAGAGACTCCTGTAGAACCACTTATCCAAGTGTaGGGTCCCACACAAAAATATTGGGTAAACTGGGAACTTTGGGAC +
Preference number: 6 (lower is better)
Translates to: RKSRPETPVEPLIQV*GPTQKYWVNWELWD
Trigger: GTCCCAAAGTTCCCAGTTTACCCAATATTTTTGTGTGGGACCCAACACTTGGATAAGTGGTTCTACAGGAGTCTCTGGCCTGCTTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567384.1
CDS CAA 72 bp AGGCCAGAGACTCCTGTAGAACCACTTATCCAAGTGTaGGGTCCCACACAAAAATATTGGGTAAACTGGGAA +
Preference number: 6 (lower is better)
Translates to: RPETPVEPLIQV*GPTQKYWVNWE
Trigger: TTCCCAGTTTACCCAATATTTTTGTGTGGGACCCAACACTTGGATAAGTGGTTCTACAGGAGTCTCTGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567384.1
CDS CAA 90 bp TCCTGTAGAACCACTTATCCAAGTGTTGGGTCCCACACAAAAATATaGGGTAAACTGGGAACTTTGGGACACGAAGTGGTAGCAAAAGTG +
Preference number: 6 (lower is better)
Translates to: SCRTTYPSVGSHTKI*GKLGTLGHEVVAKV
Trigger: CACTTTTGCTACCACTTCGTGTCCCAAAGTTCCCAGTTTACCCAATATTTTTGTGTGGGACCCAACACTTGGATAAGTGGTTCTACAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567384.1
CDS CAA 72 bp ACCACTTATCCAAGTGTTGGGTCCCACACAAAAATATaGGGTAAACTGGGAACTTTGGGACACGAAGTGGTA +
Preference number: 6 (lower is better)
Translates to: TTYPSVGSHTKI*GKLGTLGHEVV
Trigger: TACCACTTCGTGTCCCAAAGTTCCCAGTTTACCCAATATTTTTGTGTGGGACCCAACACTTGGATAAGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567384.1
CDS CCA 72 bp TGTTTGTATTGTTCAGTTTTCACAATGAGCCTACAGTaGAGTCAGAGCACCCACATTTCACTAATGAGACTT +
Preference number: 6 (lower is better)
Translates to: CLYCSVFTMSLQ*SQSTHISLMRL
Trigger: AAGTCTCATTAGTGAAATGTGGGTGCTCTGACTCCACTGTAGGCTCATTGTGAAAACTGAACAATACAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS CAA 90 bp ATGAAACATGGGAGTTTTGATCACAGACAATTCTTGCCTAATAGATaGCCTTTAGAACACAACTCCCAAGAACCAACTCCATGGTATGTT +
Preference number: 6 (lower is better)
Translates to: MKHGSFDHRQFLPNR*PLEHNSQEPTPWYV
Trigger: AACATACCATGGAGTTGGTTCTTGGGAGTTGTGTTCTAAAGGCAATCTATTAGGCAAGAATTGTCTGTGATCAAAACTCCCATGTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566388.5
CDS CAA 72 bp TCAATGAAACATGGGAGTTTTGATCACAGACAATTCTaGCCTAATAGATTGCCTTTAGAACACAACTCCCAA +
Preference number: 6 (lower is better)
Translates to: SMKHGSFDHRQF*PNRLPLEHNSQ
Trigger: TTGGGAGTTGTGTTCTAAAGGCAATCTATTAGGCAAGAATTGTCTGTGATCAAAACTCCCATGTTTCATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566388.5