RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COQ8A (Homo sapiens)

Ensembl gene IDs: ENSG00000163050

Ensembl transcript IDs: ENST00000366777.4, ENST00000366778.5, ENST00000476488.1, ENST00000478406.5, ENST00000479852.1, ENST00000485462.5, ENST00000489044.1

Found 376 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TATTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTaGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCC +
Preference number: 1 (lower is better)
Translates to: YWAKELKRASPRPRY*FLACLRERVPAEPA
Trigger: GGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR CCA 90 bp ATTACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTaGCTGGAACTGGTGACACCTGTGCCTCTCCGGACAGAGGAAGGA +
Preference number: 1 (lower is better)
Translates to: ITRLVQKFTAPVRSL*LELVTPVPLRTEEG
Trigger: TCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACCAGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR TCA 90 bp CTTTCATCTTCATCTGCTTATTTCAGAGGACACACGGAGGCAGACTaGCCGAGCAGTGGGGCTTCATCTTCATTCTTGCACTTCTCACCC +
Preference number: 1 (lower is better)
Translates to: LSSSSAYFRGHTEAD*PSSGASSSFLHFSP
Trigger: GGGTGAGAAGTGCAAGAATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAATAAGCAGATGAAGATGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR-3UTR TCA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGCACACGGAGGCAGACTaGCCGAGCAGTGGGGCTTCA +
Preference number: 2 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQHTEAD*PSSGAS
Trigger: TGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTG...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR CAA 90 bp GAGAACCAGCCCCACAGGCCTGGGCCTCGCAGGCTTAAGGAGCACTaGTTGGCACTGTTAGCTCAGCACCTCTCCCAGCTCCAGCCCATC +
Preference number: 2 (lower is better)
Translates to: ENQPHRPGPRRLKEH*LALLAQHLSQLQPI
Trigger: GATGGGCTGGAGCTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGGCCCAGGCCTGTGGGGCTGGTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR-3UTR TCA 90 bp AGGCCTGGGCCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCACACGGAGGCAGACTaGCCGAGCAGTGGGGCTTCA +
Preference number: 2 (lower is better)
Translates to: RPGPRRLKEHLLALLAQHHTEAD*PSSGAS
Trigger: TGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTG...GTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGGCCCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR-3UTR CCA 90 bp CCTTCCAGCAGCAGCGAGCCTGTGTCTGGCATTCCCTGTTCCGCTGCTCCCACCCCACGACCTCGCTACTaGTTTTTGGCCTGTCTGAGG +
Preference number: 2 (lower is better)
Translates to: PSSSSEPVSGIPCSAAPTPRPRY*FLACLR
Trigger: CCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGG...GGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR CAA 90 bp GCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTaGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCG +
Preference number: 2 (lower is better)
Translates to: AKELKRASPRPRYWF*ACLRERVPAEPAWA
Trigger: CGCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR-3UTR CCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTAACCGTGGAAAGCGCTaGCTACGGGGCTCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSNRGKR*LRGSRQ
Trigger: CTGCCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTT...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR-3UTR GCA 90 bp CCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCTCTCCCAGAGAAGAAAACAAAGTTaGCCTTTCATCTTCATCTGC +
Preference number: 2 (lower is better)
Translates to: PRRLKEHLLALLAQHLSQRRKQS*PFIFIC
Trigger: GCAGATGAAGATGAAAGGGCAACTTTGTTTTCTTCT...CTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR-3UTR CCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCCACGACCTCGCTACTaGTTTTTGGCCTGTCTGAGG +
Preference number: 2 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSPRPRY*FLACLR
Trigger: CCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGG...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR-3UTR TCA 90 bp ACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTGTTCTGGGTTTTGCACTaGACAGAGATTGGAAGGGAG +
Preference number: 2 (lower is better)
Translates to: TRLVQKFTAPVRSLWLELFWVLH*TEIGRE
Trigger: CTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAA...CAGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR-3UTR CCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTAGACTGACCGAGCAGTaGGGCTTCATCTTCATTCTT +
Preference number: 2 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSRLTEQ*GFIFIL
Trigger: AAGAATGAAGATGAAGCCCCACTGCTCGGTCAGTCT...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR-3UTR GCA 90 bp TACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTCTTCATCTTCATTCTTaGACTTCTCACCCTACAACC +
Preference number: 2 (lower is better)
Translates to: YKTCTKIHSACEEPLAGTLHLHS*TSHPTT
Trigger: GGTTGTAGGGTGAGAAGTGCAAGAATGAAGATGAAG...AGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR-3UTR GCA 90 bp ATTACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAAAGAAGAAAACAAAGTTaGCCTTTCATCTTCATCTGC +
Preference number: 2 (lower is better)
Translates to: ITRLVQKFTAPVRSLWLERRKQS*PFIFIC
Trigger: GCAGATGAAGATGAAAGGGCAACTTTGTTTTCTTCT...TTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR CCA 72 bp TCCCACCCCGCCTTCCAGCAGCAGCGAGCCTGTGTCTaGCATTCCCTGTTCCGCTGCTCCCACCCTCACTGT +
Preference number: 3 (lower is better)
Translates to: SHPAFQQQRACV*HSLFRCSHPHC
Trigger: ACAGTGAGGGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGGCGGGGTGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR TCA 72 bp CATCACCACGACCTCGCTACTGGTTTTTGGCCTGTCTaGGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCGT +
Preference number: 3 (lower is better)
Translates to: HHHDLATGFWPV*GREFPRSRPGR
Trigger: ACGCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR-3UTR CAA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGAGGCTTAAGGAGCACTaGTTGGCACTGTTAGCTCAG +
Preference number: 3 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQRLKEH*LALLAQ
Trigger: CTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCT...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR-3UTR CAA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGTGCACTGAACAGAGATaGGAAGGGAGTAAGGACTCT +
Preference number: 3 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQCTEQR*EGSKDS
Trigger: AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCA...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR TCA 72 bp GGCAGCAGTTCTTTAGGAACATTCAGCTGTCAAAGGTaGGAACCAGCCCCACAGGCCTGGGCCTCGCAGGCT +
Preference number: 3 (lower is better)
Translates to: GSSSLGTFSCQR*EPAPQAWASQA
Trigger: AGCCTGCGAGGCCCAGGCCTGTGGGGCTGGTTCTCACCTTTGACAGCTGAATGTTCCTAAAGAACTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR-3UTR CAA 90 bp CCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCTCTCCCAGCCTCGCTACTGGTTTTaGGCCTGTCTGAGGGAGAGA +
Preference number: 3 (lower is better)
Translates to: PRRLKEHLLALLAQHLSQPRYWF*ACLRER
Trigger: TCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGG...CTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR CCA 72 bp CTGGCATTCCCTGTTCCGCTGCTCCCACCCTCACTGTaGGGCAGCAGTTCTTTAGGAACATTCAGCTGTCAA +
Preference number: 3 (lower is better)
Translates to: LAFPVPLLPPSL*GSSSLGTFSCQ
Trigger: TTGACAGCTGAATGTTCCTAAAGAACTGCTGCCCCACAGTGAGGGTGGGAGCAGCGGAACAGGGAATGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR CCA 72 bp AAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTaGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCG +
Preference number: 3 (lower is better)
Translates to: KELKRASPRPRY*FLACLRERVPA
Trigger: CGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR TCA 72 bp TCATCTGCTTATTTCAGAGGACACACGGAGGCAGACTaGCCGAGCAGTGGGGCTTCATCTTCATTCTTGCAC +
Preference number: 3 (lower is better)
Translates to: SSAYFRGHTEAD*PSSGASSSFLH
Trigger: GTGCAAGAATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAATAAGCAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR-3UTR CAA 90 bp TTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTCCCTTCCTCGCTACTGGTTTTaGGCCTGTCTGAGGGAGAGA +
Preference number: 3 (lower is better)
Translates to: FLGFALNRDWKGVRTLSLPRYWF*ACLRER
Trigger: TCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGG...AAGGGAGAGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR-3UTR CAA 90 bp ACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTGTGCACTGAACAGAGATaGGAAGGGAGTAAGGACTCT +
Preference number: 3 (lower is better)
Translates to: TRLVQKFTAPVRSLWLELCTEQR*EGSKDS
Trigger: AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCA...CAGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp CGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGCAGGGATGGGGGCGCTaGCTGGTCGGGAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RPRYWFLACLRERVPAEPQGWGR*LVGSGG
Trigger: GCCTCCGCTCCCGACCAGTCAGCGCCCCCATCCCTG...CGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGGGGCCCTGGCCGCCATaGTCAGCTCCCCTCCGATGC +
Preference number: 4 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQGPWPP*SAPLRC
Trigger: GCATCGGAGGGGAGCTGATCATGGCGGCCAGGGCCC...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366777.4
CDS-3UTR TCA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGCACGGCCTTCTTCCCTaGGGGGTCCTCGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQHGLLP*GVLGAQ
Trigger: CTGCGCTCCGAGGACCCCTCAGGGAAGAAGGCCGTG...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CCTTCCAGCAGCAGCGAGCCTGTGTCTGGCATTCCCTGTTCCGCTGCTCCCACCCACCTGCCCAATGGATaGGGCGGCGAAGGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: PSSSSEPVSGIPCSAAPTHLPNG*GGEGPL
Trigger: GAGCGGCCCTTCGCCGCCGCATCCATTGGGCAGGTG...GGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCTCCACAGCCGTGGACTaGAGGGCCCTGGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: LLVFGLSEGESSRGAGLGSTAVD*RALAAM
Trigger: CATGGCGGCCAGGGCCCTGCAGTCCACGGCTGTGGA...GCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366777.4
CDS-3UTR TCA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGGTCGGGAGCGGAGGCTaGAGAGAAGTCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQVGSGG*REVCGG
Trigger: GCCTCCACAGACTTCTCTTCAGCCTCCGCTCCCGAC...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGTCCGAATCTCCTGGCTaGGCCCTTCGGCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQSESPG*ALRPGP
Trigger: TGGACCAGGCCGAAGGGCTCAGCCAGGAGATTCGGA...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp CCTTCCAGCAGCAGCGAGCCTGTGTCTGGCATTCCCTGTTCCGCTGCTCCCACCTCCGAATCTCCTGGCTaGGCCCTTCGGCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PSSSSEPVSGIPCSAAPTSESPG*ALRPGP
Trigger: TGGACCAGGCCGAAGGGCTCAGCCAGGAGATTCGGA...GGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp CCTTCCAGCAGCAGCGAGCCTGTGTCTGGCATTCCCTGTTCCGCTGCTCCCACCCACACGGAGGCAGACTaGCCGAGCAGTGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PSSSSEPVSGIPCSAAPTHTEAD*PSSGAS
Trigger: TGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTG...GGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CCTTCCAGCAGCAGCGAGCCTGTGTCTGGCATTCCCTGTTCCGCTGCTCCCACCGGGCGAGCCTTAGCCTaGCGGGCCTTCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: PSSSSEPVSGIPCSAAPTGRALA*RAFSMS
Trigger: GGACATTGAGAAGGCCCGGCAGGCTAAGGCTCGCCC...GGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCCTGGCCCAGCTTGAGTaGCGCACCACGCACCTTGCA +
Preference number: 4 (lower is better)
Translates to: LLVFGLSEGESSRGAGLGLAQLE*RTTHLA
Trigger: TGCAAGGTGCGTGGTGCGGCACTCAAGCTGGGCCAG...GCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CCTTCCAGCAGCAGCGAGCCTGTGTCTGGCATTCCCTGTTCCGCTGCTCCCACCCCAGACCTCCGAAGTTaGCCAGCCGGCCAATCCTCG +
Preference number: 4 (lower is better)
Translates to: PSSSSEPVSGIPCSAAPTPDLRS*PAGQSS
Trigger: CGAGGATTGGCCGGCTGGCCAACTTCGGAGGTCTGG...GGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCCCAGACCTCCGAAGTTaGCCAGCCGGCCAATCCTCG +
Preference number: 4 (lower is better)
Translates to: LLVFGLSEGESSRGAGLGPDLRS*PAGQSS
Trigger: CGAGGATTGGCCGGCTGGCCAACTTCGGAGGTCTGG...GCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGAGCGCAGGCTCTTCTTaGCGACCTCTGCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQSAGSS*RPLPVP
Trigger: GGGCACTGGCAGAGGTCGCCAAGAAGAGCCTGCGCT...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CCTTCCAGCAGCAGCGAGCCTGTGTCTGGCATTCCCTGTTCCGCTGCTCCCACCGTAGGTTTCCTCGGGTaGGGGGACGAGACGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PSSSSEPVSGIPCSAAPTVGFLG*GDETVP
Trigger: AGGCACCGTCTCGTCCCCCCACCCGAGGAAACCTAC...GGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGAGGCCTCCTCGAACATaGCCTTGCAGGGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQRPPRT*PCRGSG
Trigger: CCCGCTTCCCCTGCAAGGCCATGTTCGAGGAGGCCT...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGCTTCTTGGCGACCTCTaGCAGTGCCCCGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RPRYWFLACLRERVPAEPLLGDL*QCPEAQ
Trigger: CTGGGCTTCGGGGCACTGGCAGAGGTCGCCAAGAAG...CGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCGCGCACGATCCGCTCTaGATTGGCCTCGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: LLVFGLSEGESSRGAGLGAHDPL*IGLGQE
Trigger: TTCCTGTCCGAGGCCAATGCAGAGCGGATCGTGCGC...GCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CCTTCCAGCAGCAGCGAGCCTGTGTCTGGCATTCCCTGTTCCGCTGCTCCCACCGCACCTTGCAGAGCGTaGGCACGATCCGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PSSSSEPVSGIPCSAAPTAPCRA*ARSALH
Trigger: ATGCAGAGCGGATCGTGCGCACGCTCTGCAAGGTGC...GGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCATGAAGTCCGCGCTCTaGCGCACCCGCTCGAAGATC +
Preference number: 4 (lower is better)
Translates to: LLVFGLSEGESSRGAGLGMKSAL*RTRSKI
Trigger: GATCTTCGAGCGGGTGCGGCAGAGCGCGGACTTCAT...GCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCCATTCCCTGTTCCGCTaGTCCCACCCTCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: LLVFGLSEGESSRGAGLGHSLFR*SHPHCG
Trigger: CCCACAGTGAGGGTGGGAGCAGCGGAACAGGGAATG...GCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGTCAGCTCCCCTCCGATaGCCAAGTGCTGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RPRYWFLACLRERVPAEPSAPLR*PSAAGG
Trigger: CCCACCTGCAGCACTTGGGCATCGGAGGGGAGCTGA...CGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366777.4
CDS-3UTR CCA 90 bp CGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGGTACTGGATCTTCATaGCCACCTCGCGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: RPRYWFLACLRERVPAEPGTGSS*PPRGRP
Trigger: AGGGCGGCCGCGAGGTGGCCATGAAGATCCAGTACC...CGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CCTTCCAGCAGCAGCGAGCCTGTGTCTGGCATTCCCTGTTCCGCTGCTCCCACCTCGTTCCGAATCTCCTaGCTGAGCCCTTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PSSSSEPVSGIPCSAAPTSFRIS*LSPSAW
Trigger: CCAGGCCGAAGGGCTCAGCCAGGAGATTCGGAACGA...GGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGGCCATCCTTCAGGGCTaGCTGCAGGAAGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQAILQG*LQEAGI
Trigger: GATCCCAGCTTCCTGCAGCCAGCCCTGAAGGATGGC...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366777.4
CDS-3UTR TCA 90 bp CCTTCCAGCAGCAGCGAGCCTGTGTCTGGCATTCCCTGTTCCGCTGCTCCCACCGACGGTGCCTCAGCATaGCGGGAATCAGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PSSSSEPVSGIPCSAAPTDGASA*RESGCG
Trigger: TCCACAACCTGATTCCCGTCATGCTGAGGCACCGTC...GGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGTTCCGCTCCCGGGCATaGTCGCTGAGCGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: RPRYWFLACLRERVPAEPFRSRA*SLSVCL
Trigger: CAAACAGACGCTCAGCGAGCATGCCCGGGAGCGGAA...CGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGGCTGGGCCTGCCTCTTaGAGTAGTTGCTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQAGPAS*SSCCRP
Trigger: AGGCCTACAGCAACTACTGCAAGAGGCAGGCCCAGC...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGTGGAACTCCCCTTCTaGGCCGCCGAAGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: RPRYWFLACLRERVPAEPVELPF*AAEVLS
Trigger: GCTGAGAACTTCGGCGGCCCAGAAGGGGAGTTCCAC...CGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CCTTCCAGCAGCAGCGAGCCTGTGTCTGGCATTCCCTGTTCCGCTGCTCCCACCCTGAAGAGAAGTCTGTaGAGGCTCCGGCTGCATGCG +
Preference number: 4 (lower is better)
Translates to: PSSSSEPVSGIPCSAAPTLKRSL*RLRLHA
Trigger: CGCATGCAGCCGGAGCCTCCACAGACTTCTCTTCAG...GGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp AGGCCTGGGCCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACGATGGGGGCGCTGACTaGTCGGGAGCGGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: RPGPRRLKEHLLALLAQHDGGAD*SGAEAE
Trigger: TTCAGCCTCCGCTCCCGACCAGTCAGCGCCCCCATC...GTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGGCCCAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCCGGACAGGAAAGGACTaGAACCCAGCACGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLVFGLSEGESSRGAGLGRTGKD*NPARPS
Trigger: AGAAGGCCGTGCTGGGTTCCAGTCCTTTCCTGTCCG...GCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
3UTR CAA 72 bp CCCCACAGGCCTGGGCCTCGCAGGCTTAAGGAGCACTaGTTGGCACTGTTAGCTCAGCACCTCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PHRPGPRRLKEH*LALLAQHLSQL
Trigger: GAGCTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGGCCCAGGCCTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGAATTCACAGCGCCTGTaGGGAGCCTTTGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQNSQRL*GAFGWN
Trigger: GTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATT...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCCCTTCCCCAAGAACATaGCAATCTGCTCCACAGCCG +
Preference number: 4 (lower is better)
Translates to: LLVFGLSEGESSRGAGLGPSPRT*QSAPQP
Trigger: CGGCTGTGGAGCAGATTGGCATGTTCTTGGGGAAGG...GCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGTTCATTCGGGCCAAGTaGACCTGCCCAATGGATGCG +
Preference number: 4 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQFIRAK*TCPMDA
Trigger: CGCATCCATTGGGCAGGTGCACTTGGCCCGAATGAA...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCTCTCCCAGCAAAGAGCCTCCCGTTaGCCCTGCCCAGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PRRLKEHLLALLAQHLSQQRASR*PCPEGR
Trigger: CCTCCCCTCTGGGCAGGGCCAACGGGAGGCTCTTTG...CTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGCAGACACCAGCTCTGTaGTCAGCACATGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RPRYWFLACLRERVPAEPQTPAL*SAHVGC
Trigger: GCAGCCCACATGTGCTGACCACAGAGCTGGTGTCTG...CGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp AGGCCTGGGCCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACAGGCCTCCTCGAACATaGCCTTGCAGGGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: RPGPRRLKEHLLALLAQHRPPRT*PCRGSG
Trigger: CCCGCTTCCCCTGCAAGGCCATGTTCGAGGAGGCCT...GTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGGCCCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp CCTTCCAGCAGCAGCGAGCCTGTGTCTGGCATTCCCTGTTCCGCTGCTCCCACCGCCCATGGCAGAGAATaGGTCTCTGGGGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: PSSSSEPVSGIPCSAAPTAHGRE*VSGVCK
Trigger: TTTGCAAACCCCAGAGACTCATTCTCTGCCATGGGC...GGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCTCCAGGTCCACAGCCGTGGACTaGAGGGCCCTGGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LQPFSNRNRGKRWLRGSRSTAVD*RALAAG
Trigger: TCCTGCAGCCAGGGCCCTGCAGTCCACGGCTGTGGA...CCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366778.5
CDS-3UTR GCA 90 bp AGGCCTGGGCCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACGAGGCTCCGGCTGCATaGGGGACTGAGAAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: RPGPRRLKEHLLALLAQHEAPAA*GTEKWN
Trigger: GTTCCACTTCTCAGTCCCGCATGCAGCCGGAGCCTC...GTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGGCCCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCTCTCCCAGGGGCGAGCCTTAGCCTaGCGGGCCTTCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: PRRLKEHLLALLAQHLSQGRALA*RAFSMS
Trigger: GGACATTGAGAAGGCCCGGCAGGCTAAGGCTCGCCC...CTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGCTGAGCGTCTGTTTGTaGTGCTTGTTCTCGGGGCGA +
Preference number: 4 (lower is better)
Translates to: RPRYWFLACLRERVPAEPLSVCL*CLFSGR
Trigger: TCGCCCCGAGAACAAGCAGCACAAACAGACGCTCAG...CGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATGGCCCGCAGCCCTACTaGTGGGCCTGCCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHGPQPY*WACLLQ
Trigger: CTGCAAGAGGCAGGCCCAGCAGTAGGGCTGCGGGCC...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCTCCAGGCTGAGCCCTTCGGCCTaGTCCAGGGGGAAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: LQPFSNRNRGKRWLRGSRLSPSA*SRGKPD
Trigger: GTCTGGCTTCCCCCTGGACCAGGCCGAAGGGCTCAG...CCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATTCTGCTCCACAGCCGTaGACTGCAGGGCCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHSAPQP*TAGPWP
Trigger: CGGCCAGGGCCCTGCAGTCCACGGCTGTGGAGCAGA...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366777.4
CDS-3UTR TCA 90 bp AAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTGCATCTGGCCCAGCTTaGGTGCCGCACCACGCACCT +
Preference number: 4 (lower is better)
Translates to: KSITTTSLLVFGLSEGESASGPA*VPHHAP
Trigger: AGGTGCGTGGTGCGGCACTCAAGCTGGGCCAGATGC...ACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp CCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCTCTCCCAGTCTGCTTCAGTGGCATaGAGTCCGCGCTCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: PRRLKEHLLALLAQHLSQSASVA*SPRSAA
Trigger: TGCGGCAGAGCGCGGACTTCATGCCACTGAAGCAGA...CTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp AGGCCTGGGCCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACAGCGTCTGTTTGTGCTaGTTGTTCTCGGGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: RPGPRRLKEHLLALLAQHSVCLC*LFSGRA
Trigger: GGCTCGCCCCGAGAACAAGCAGCACAAACAGACGCT...GTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGGCCCAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCTCCAGGCTTCTTGGCGACCTCTaGCAGTGCCCCGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LQPFSNRNRGKRWLRGSRLLGDL*QCPEAQ
Trigger: CTGGGCTTCGGGGCACTGGCAGAGGTCGCCAAGAAG...CCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCTCTCCCAGGCGCACGATCCGCTCTaGATTGGCCTCGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: PRRLKEHLLALLAQHLSQAHDPL*IGLGQE
Trigger: TTCCTGTCCGAGGCCAATGCAGAGCGGATCGTGCGC...CTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp AAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTCCGCACCACGCACCTTaGAGAGCGTGCGCACGATCC +
Preference number: 4 (lower is better)
Translates to: KSITTTSLLVFGLSEGESPHHAP*RACARS
Trigger: GGATCGTGCGCACGCTCTGCAAGGTGCGTGGTGCGG...ACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CCTTCCAGCAGCAGCGAGCCTGTGTCTGGCATTCCCTGTTCCGCTGCTCCCACCTCAGCACATGTGGGCTaGAGAGCTCATCCACAATCT +
Preference number: 4 (lower is better)
Translates to: PSSSSEPVSGIPCSAAPTSAHVG*RAHPQS
Trigger: AGATTGTGGATGAGCTCTGCAGCCCACATGTGCTGA...GGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CTTCTCACCCTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCCCGCAGCCCTACTaGTGGGCCTGCCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LLTLQPFSNRNRGKRWLRGPQPY*WACLLQ
Trigger: CTGCAAGAGGCAGGCCCAGCAGTAGGGCTGCGGGCC...CCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAGGGTGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCTCTCCCAGCATTCCCTGTTCCGCTaGTCCCACCCTCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: PRRLKEHLLALLAQHLSQHSLFR*SHPHCG
Trigger: CCCACAGTGAGGGTGGGAGCAGCGGAACAGGGAATG...CTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp AAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTCACGTAGGCAGGAGCTaGGCCCTCGCTGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: KSITTTSLLVFGLSEGESHVGRS*ALAVGM
Trigger: CATGCCCACAGCGAGGGCCCAGCTCCTGCCTACGTG...ACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp AAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTAGTGCACCTGCCCAATaGATGCGGCGGCGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: KSITTTSLLVFGLSEGESSAPAQ*MRRRRA
Trigger: GGCCCTTCGCCGCCGCATCCATTGGGCAGGTGCACT...ACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATAGTGCACCTGCCCAATaGATGCGGCGGCGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHSAPAQ*MRRRRA
Trigger: GGCCCTTCGCCGCCGCATCCATTGGGCAGGTGCACT...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCTCTCCCAGCAGCGAGCCTGTGTCTaGCATTCCCTGTTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PRRLKEHLLALLAQHLSQQRACV*HSLFRC
Trigger: GCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTG...CTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp CGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGTGGAAGAACCTTCGCTaGAAGCCCATGGCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: RPRYWFLACLRERVPAEPWKNLR*KPMAEN
Trigger: ATTCTCTGCCATGGGCTTTCAGCGAAGGTTCTTCCA...CGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp CTTCTCACCCTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGCATCTGGCCCAGCTTaGGTGCCGCACCACGCACCT +
Preference number: 4 (lower is better)
Translates to: LLTLQPFSNRNRGKRWLRASGPA*VPHHAP
Trigger: AGGTGCGTGGTGCGGCACTCAAGCTGGGCCAGATGC...CCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAGGGTGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp CGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGGCCCAGGTCGTTGTTaGGAGTTTTCATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: RPRYWFLACLRERVPAEPGPGRC*EFSSSA
Trigger: AGCAGATGATGAAAACTCTCAACAACGACCTGGGCC...CGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp CTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCTTCTGGGTTTTGCACTaGACAGAGATTGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLVFGLSEGESSRGAGLGFWVLH*TEIGRE
Trigger: CTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAA...GCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp AGGCCTGGGCCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCCTTCCCCAAGAACATaGCAATCTGCTCCACAGCCG +
Preference number: 4 (lower is better)
Translates to: RPGPRRLKEHLLALLAQHPSPRT*QSAPQP
Trigger: CGGCTGTGGAGCAGATTGGCATGTTCTTGGGGAAGG...GTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGGCCCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CTTCTCACCCTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGCCGCACCACGCACCTTaGAGAGCGTGCGCACGATCC +
Preference number: 4 (lower is better)
Translates to: LLTLQPFSNRNRGKRWLRPHHAP*RACARS
Trigger: GGATCGTGCGCACGCTCTGCAAGGTGCGTGGTGCGG...CCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAGGGTGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCCTTCTGGAAGCATGTTaGTCATGTTCAACACGGCCA +
Preference number: 4 (lower is better)
Translates to: LLVFGLSEGESSRGAGLGLLEAC*SCSTRP
Trigger: TGGCCGTGTTGAACATGAGCAACATGCTTCCAGAAG...GCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGGTCATATTCCCGCGTTaGCCCAAAATCCAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQVIFPR*PKIQKS
Trigger: GCTCTTTTGGATTTTGGGGCAACGCGGGAATATGAC...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp AGGCCTGGGCCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCCCCCAACAGGGGATTaGTCCTGGTGGAAGAACCTT +
Preference number: 4 (lower is better)
Translates to: RPGPRRLKEHLLALLAQHPPTGD*SWWKNL
Trigger: AAGGTTCTTCCACCAGGACCAATCCCCTGTTGGGGG...GTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGGCCCAGGCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp AAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTAGCGCAGGCTCTTCTTaGCGACCTCTGCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: KSITTTSLLVFGLSEGESSAGSS*RPLPVP
Trigger: GGGCACTGGCAGAGGTCGCCAAGAAGAGCCTGCGCT...ACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCTCCAGGGCCACGCCAGGGTACTaGATCTTCATGGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: LQPFSNRNRGKRWLRGSRATPGY*IFMATS
Trigger: CGAGGTGGCCATGAAGATCCAGTACCCTGGCGTGGC...CCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCGGAACTTCATCTCTATaGATTTCGCCCGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: LLVFGLSEGESSRGAGLGGTSSL*ISPAQS
Trigger: AGACTGTGCGGGCGAAATCCATAGAGATGAAGTTCC...GCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp TTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTCCCTTGAGCCGGCCTGGGCGTaGCCCGCAGCCCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: FLGFALNRDWKGVRTLSLEPAWA*PAALLL
Trigger: CAGCAGTAGGGCTGCGGGCCACGCCCAGGCCGGCTC...AAGGGAGAGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp AGGCCTGGGCCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCCACGACCTCGCTACTaGTTTTTGGCCTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RPGPRRLKEHLLALLAQHPRPRY*FLACLR
Trigger: CCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGG...GTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGGCCCAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGAGACTGACCGAGCAGTaGGGCTTCATCTTCATTCTT +
Preference number: 4 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQRLTEQ*GFIFIL
Trigger: AAGAATGAAGATGAAGCCCCACTGCTCGGTCAGTCT...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp ACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTGCACGGCCTTCTTCCCTaGGGGGTCCTCGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: TRLVQKFTAPVRSLWLELHGLLP*GVLGAQ
Trigger: CTGCGCTCCGAGGACCCCTCAGGGAAGAAGGCCGTG...CAGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp AAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCTGCTTCAGTGGCATaGAGTCCGCGCTCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: KSITTTSLLVFGLSEGESSASVA*SPRSAA
Trigger: TGCGGCAGAGCGCGGACTTCATGCCACTGAAGCAGA...ACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp CTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCTCCAGGTTCAGCTGTCAAAGGTaGGAACCAGCCCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: LQPFSNRNRGKRWLRGSRFSCQR*EPAPQA
Trigger: GGCCTGTGGGGCTGGTTCTCACCTTTGACAGCTGAA...CCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp TTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTCCCTTGCCTCCCGTTGGCCCTaGCCAGAGGGGAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: FLGFALNRDWKGVRTLSLASRWP*PEGRRP
Trigger: AGGCCTCCTCCCCTCTGGGCAGGGCCAACGGGAGGC...AAGGGAGAGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp TACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTGCCTCCCGTTGGCCCTaGCCAGAGGGGAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: YKTCTKIHSACEEPLAGTASRWP*PEGRRP
Trigger: AGGCCTCCTCCCCTCTGGGCAGGGCCAACGGGAGGC...AGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATTTCCGCTCCCGGGCATaGTCGCTGAGCGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHFRSRA*SLSVCL
Trigger: CAAACAGACGCTCAGCGAGCATGCCCGGGAGCGGAA...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATATGAAGTCCGCGCTCTaGCGCACCCGCTCGAAGATC +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHMKSAL*RTRSKI
Trigger: GATCTTCGAGCGGGTGCGGCAGAGCGCGGACTTCAT...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCGGGCCAAGTGCACCTaGCCAATGGATGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGRAKCT*PMDAAA
Trigger: CGCCGCCGCATCCATTGGGCAGGTGCACTTGGCCCG...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCTCCAGGAGCACGTCGATCAGGTaGTCGGGGAACAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LQPFSNRNRGKRWLRGSRSTSIR*SGNRPS
Trigger: AGAAGGCCTGTTCCCCGAGCACCTGATCGACGTGCT...CCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTTCTCACCCTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGTGGACTGCAGGGCCCTaGCTGCAGGAAGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: LLTLQPFSNRNRGKRWLRWTAGP*LQEAGI
Trigger: GATCCCAGCTTCCTGCAGCCAGGGCCCTGCAGTCCA...CCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAGGGTGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366778.5
CDS-3UTR CCA 90 bp CCTTCCAGCAGCAGCGAGCCTGTGTCTGGCATTCCCTGTTCCGCTGCTCCCACCAAGATCTTAGCCAGGTaGGGGTTGATAAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: PSSSSEPVSGIPCSAAPTKILAR*GLIKAS
Trigger: TGATGCCTTTATCAACCCCCACCTGGCTAAGATCTT...GGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGTGTGGATCTTCTCGGTaGTGCTCTGAGTGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: RPRYWFLACLRERVPAEPCGSSR*CSECQN
Trigger: ATTTTGGCACTCAGAGCACCACCGAGAAGATCCACA...CGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTGAGCCGGCCTGGGCGTaGCCCGCAGCCCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSEPAWA*PAALLL
Trigger: CAGCAGTAGGGCTGCGGGCCACGCCCAGGCCGGCTC...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATCAGCGAGCCTGTGTCTaGCATTCCCTGTTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHQRACV*HSLFRC
Trigger: GCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTG...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATGACGGTGCCTCAGCATaGCGGGAATCAGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHDGASA*RESGCG
Trigger: TCCACAACCTGATTCCCGTCATGCTGAGGCACCGTC...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp AAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTTCAGCTGTCAAAGGTaGGAACCAGCCCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: KSITTTSLLVFGLSEGESFSCQR*EPAPQA
Trigger: GGCCTGTGGGGCTGGTTCTCACCTTTGACAGCTGAA...ACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCTCCAGGCTGAGCGTCTGTTTGTaGTGCTTGTTCTCGGGGCGA +
Preference number: 4 (lower is better)
Translates to: LQPFSNRNRGKRWLRGSRLSVCL*CLFSGR
Trigger: TCGCCCCGAGAACAAGCAGCACAAACAGACGCTCAG...CCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp TTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTCCCTTCGGGCCAAGTGCACCTaGCCAATGGATGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: FLGFALNRDWKGVRTLSLRAKCT*PMDAAA
Trigger: CGCCGCCGCATCCATTGGGCAGGTGCACTTGGCCCG...AAGGGAGAGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATGCTGGGCCTGCCTCTTaGAGTAGTTGCTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHAGPAS*SSCCRP
Trigger: AGGCCTACAGCAACTACTGCAAGAGGCAGGCCCAGC...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCTCTGCTCCACAGCCGTaGACTGCAGGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGSAPQP*TAGPWL
Trigger: CAGCCAGGGCCCTGCAGTCCACGGCTGTGGAGCAGA...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366778.5
CDS-3UTR CCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCACGTAGGCAGGAGCTaGGCCCTCGCTGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGHVGRS*ALAVGM
Trigger: CATGCCCACAGCGAGGGCCCAGCTCCTGCCTACGTG...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCAAAGAGCCTCCCGTTaGCCCTGCCCAGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGQRASR*PCPEGR
Trigger: CCTCCCCTCTGGGCAGGGCCAACGGGAGGCTCTTTG...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTTCTCACCCTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGCCACGCCAGGGTACTaGATCTTCATGGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: LLTLQPFSNRNRGKRWLRATPGY*IFMATS
Trigger: CGAGGTGGCCATGAAGATCCAGTACCCTGGCGTGGC...CCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAGGGTGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATTCACTGTTGATGCTCTaGGCCACGCCAGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHSLLML*ATPGYW
Trigger: CCAGTACCCTGGCGTGGCCCAGAGCATCAACAGTGA...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCTCCAGGCCTGTGAGGAGCCTTTaGCTGGAACTGGTGACACCT +
Preference number: 4 (lower is better)
Translates to: LQPFSNRNRGKRWLRGSRPVRSL*LELVTP
Trigger: AGGTGTCACCAGTTCCAGCCAAAGGCTCCTCACAGG...CCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCCCAAGTGCTGCAGGTaGGTTTCCACGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGPKCCR*VSTAAW
Trigger: CCAGGCGGCCGTGGAAACCCACCTGCAGCACTTGGG...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366777.4
3UTR CAA 72 bp TTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTaGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: LKRASPRPRYWF*ACLRERVPAEP
Trigger: CGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCACACGGAGGCAGACTaGCCGAGCAGTGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGHTEAD*PSSGAS
Trigger: TGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTG...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCACCTGCCCAATGGATaGGGCGGCGAAGGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSHLPNG*GGEGPL
Trigger: GAGCGGCCCTTCGCCGCCGCATCCATTGGGCAGGTG...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp AGGCCTGGGCCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCGGTGGTGCTCTGAGTaGCAAAATCAAAAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: RPGPRRLKEHLLALLAQHRWCSE*QNQKAH
Trigger: ATGAGCCTTTTGATTTTGGCACTCAGAGCACCACCG...GTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGGCCCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CCCTTATTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTCCGATGCCCAAGTGCTaGAGGTGGGTTTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: PLLGKGVKKSITTTSLLVPMPKC*RWVSTA
Trigger: GGCCGTGGAAACCCACCTGCAGCACTTGGGCATCGG...AACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAATAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366777.4
CDS-3UTR CCA 90 bp CCCTTATTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTGGTACTGGATCTTCATaGCCACCTCGCGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PLLGKGVKKSITTTSLLVGTGSS*PPRGRP
Trigger: AGGGCGGCCGCGAGGTGGCCATGAAGATCCAGTACC...AACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAATAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCTCCAGGACGGGAATCAGGTTGTaGATCTTCTCGGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LQPFSNRNRGKRWLRGSRTGIRL*IFSVVL
Trigger: GAGCACCACCGAGAAGATCCACAACCTGATTCCCGT...CCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCGTAGGTTTCCTCGGGTaGGGGGACGAGACGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGVGFLG*GDETVP
Trigger: AGGCACCGTCTCGTCCCCCCACCCGAGGAAACCTAC...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATCTCCAGCCCATCGGCTaGAGAGGAAAAGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHLQPIG*RGKGQK
Trigger: TTTCTGCCCTTTTCCTCTCCAGCCGATGGGCTGGAG...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCAATGTCCTCGGCTGTaGGGCCCCCAACAGGGGATT +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGQCPRL*GPQQGI
Trigger: AATCCCCTGTTGGGGGCCTCACAGCCGAGGACATTG...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp CCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCTCTCCCAGGAATGTAGAGGTCGGTaGAGGATCTGTCATATTCCC +
Preference number: 4 (lower is better)
Translates to: PRRLKEHLLALLAQHLSQECRGR*RICHIP
Trigger: GGGAATATGACAGATCCTTCACCGACCTCTACATTC...CTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCGAGGCTCCGGCTGCATaGGGGACTGAGAAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGEAPAA*GTEKWN
Trigger: GTTCCACTTCTCAGTCCCGCATGCAGCCGGAGCCTC...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp TTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTCCCTTCTGGCCCAGCTTGAGTaGCGCACCACGCACCTTGCA +
Preference number: 4 (lower is better)
Translates to: FLGFALNRDWKGVRTLSLLAQLE*RTTHLA
Trigger: TGCAAGGTGCGTGGTGCGGCACTCAAGCTGGGCCAG...AAGGGAGAGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCCTCGAACATGGCCTTaGAGGGGAAGCGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGPRTWP*RGSGPS
Trigger: TGAAGGCCCGCTTCCCCTGCAAGGCCATGTTCGAGG...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp AAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTGCCTCTTGCAGTAGTTaGTGTAGGCCTCCTCGAACA +
Preference number: 4 (lower is better)
Translates to: KSITTTSLLVFGLSEGESASCSS*CRPPRT
Trigger: TGTTCGAGGAGGCCTACAGCAACTACTGCAAGAGGC...ACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp TTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTCCCTTTCCTTCAGGGCTGGCTaGAGGAAGCTGGGATCCGCG +
Preference number: 4 (lower is better)
Translates to: FLGFALNRDWKGVRTLSLSFRAG*RKLGSA
Trigger: CGCGGATCCCAGCTTCCTGCAGCCAGCCCTGAAGGA...AAGGGAGAGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366777.4
CDS-3UTR CCA 90 bp CCCTTATTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTCTGGCTGCAGGAAGCTaGGATCCGCGGTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: PLLGKGVKKSITTTSLLVLAAGS*DPRSPS
Trigger: AGAAGGTGACCGCGGATCCCAGCTTCCTGCAGCCAG...AACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAATAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCTCCAGGTTCGCTGAAAGCCCATaGCAGAGAATGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LQPFSNRNRGKRWLRGSRFAESP*QRMSLW
Trigger: CCAGAGACTCATTCTCTGCCATGGGCTTTCAGCGAA...CCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCTCCAGGGGGGAACAGGCCTTCTaGAAGCATGTTGCTCATGTT +
Preference number: 4 (lower is better)
Translates to: LQPFSNRNRGKRWLRGSRGEQAF*KHVAHV
Trigger: AACATGAGCAACATGCTTCCAGAAGGCCTGTTCCCC...CCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTGAGCCCTTCGGCCTaGTCCAGGGGGAAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSLSPSA*SRGKPD
Trigger: GTCTGGCTTCCCCCTGGACCAGGCCGAAGGGCTCAG...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp TACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTAACCGTGGAAAGCGCTaGCTACGGGGCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: YKTCTKIHSACEEPLAGTNRGKR*LRGSRQ
Trigger: CTGCCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTT...AGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCTCTCCCAGGCACTGAACAGAGATTaGAAGGGAGTAAGGACTCTC +
Preference number: 4 (lower is better)
Translates to: PRRLKEHLLALLAQHLSQALNRD*KGVRTL
Trigger: GAGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGC...CTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTTCTCACCCTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGCTCCCACCCTCACTGTaGGGCAGCAGTTCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: LLTLQPFSNRNRGKRWLRLPPSL*GSSSLG
Trigger: TCCTAAAGAACTGCTGCCCCACAGTGAGGGTGGGAG...CCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAGGGTGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATTGGTGTCTCCCAATATaGCAGCCATCCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHWCLPI*QPSFRA
Trigger: AGCCCTGAAGGATGGCTGCCATATTGGGAGACACCA...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366777.4
CDS-3UTR TCA 90 bp ATTACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAAGTCGGGAGCGGAGGCTaGAGAGAAGTCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ITRLVQKFTAPVRSLWLEVGSGG*REVCGG
Trigger: GCCTCCACAGACTTCTCTTCAGCCTCCGCTCCCGAC...TTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATTGGAAGAACCTTCGCTaGAAGCCCATGGCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHWKNLR*KPMAEN
Trigger: ATTCTCTGCCATGGGCTTTCAGCGAAGGTTCTTCCA...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATTGGGGTCTGTTTGCATaGAGTGGAACTCGAACAGCT +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHWGLFA*SGTRTA
Trigger: AGCTGTTCGAGTTCCACTTCATGCAAACAGACCCCA...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp AAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTTCTCGGTGGTGCTCTaGGTGCCAAAATCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: KSITTTSLLVFGLSEGESFSVVL*VPKSKG
Trigger: GCCTTTTGATTTTGGCACTCAGAGCACCACCGAGAA...ACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp ACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTGAGCGTCTGTTTGTGCTaGTTGTTCTCGGGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: TRLVQKFTAPVRSLWLELSVCLC*LFSGRA
Trigger: GGCTCGCCCCGAGAACAAGCAGCACAAACAGACGCT...CAGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp TACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTGCACCTTGCAGAGCGTaGGCACGATCCGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: YKTCTKIHSACEEPLAGTAPCRA*ARSALH
Trigger: ATGCAGAGCGGATCGTGCGCACGCTCTGCAAGGTGC...AGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCAGCACGTCGATCAGGTaGTCGGGGAACAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGSTSIR*SGNRPS
Trigger: AGAAGGCCTGTTCCCCGAGCACCTGATCGACGTGCT...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp TACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTCCTCGAACATGGCCTTaGAGGGGAAGCGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: YKTCTKIHSACEEPLAGTPRTWP*RGSGPS
Trigger: TGAAGGCCCGCTTCCCCTGCAAGGCCATGTTCGAGG...AGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCTGAAGAGAAGTCTGTaGAGGCTCCGGCTGCATGCG +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGLKRSL*RLRLHA
Trigger: CGCATGCAGCCGGAGCCTCCACAGACTTCTCTTCAG...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTTCTCACCCTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGCATCATCTGCTTCAGTaGCATGAAGTCCGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: LLTLQPFSNRNRGKRWLRHHLLQ*HEVRAL
Trigger: CAGAGCGCGGACTTCATGCCACTGAAGCAGATGATG...CCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAGGGTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCAGACACCAGCTCTGTaGTCAGCACATGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGQTPAL*SAHVGC
Trigger: GCAGCCCACATGTGCTGACCACAGAGCTGGTGTCTG...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCTCCAGGTCTGTTTGCATGAAGTaGAACTCGAACAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LQPFSNRNRGKRWLRGSRSVCMK*NSNSSL
Trigger: GAGGGAGCTGTTCGAGTTCCACTTCATGCAAACAGA...CCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp ATTACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACAATGTCCTCGGCTGTaGGGCCCCCAACAGGGGATT +
Preference number: 4 (lower is better)
Translates to: ITRLVQKFTAPVRSLWLEQCPRL*GPQQGI
Trigger: AATCCCCTGTTGGGGGCCTCACAGCCGAGGACATTG...TTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp CTTCTCACCCTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCCCAGGTCGTTGTTaGGAGTTTTCATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: LLTLQPFSNRNRGKRWLRGPGRC*EFSSSA
Trigger: AGCAGATGATGAAAACTCTCAACAACGACCTGGGCC...CCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAGGGTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp AAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTTCTGGGTTTTGCACTaGACAGAGATTGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KSITTTSLLVFGLSEGESFWVLH*TEIGRE
Trigger: CTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAA...ACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp CCCTTATTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTAATTCACAGCGCCTGTaGGGAGCCTTTGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: PLLGKGVKKSITTTSLLVNSQRL*GAFGWN
Trigger: GTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATT...AACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAATAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CCCTTATTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTCATTCGGGCCAAGTaGACCTGCCCAATGGATGCG +
Preference number: 4 (lower is better)
Translates to: PLLGKGVKKSITTTSLLVFIRAK*TCPMDA
Trigger: CGCATCCATTGGGCAGGTGCACTTGGCCCGAATGAA...AACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAATAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATGGATCTTCTCGGTGGTaGTCTGAGTGCCAAAATCAA +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHGSSRW*SECQNQ
Trigger: TTGATTTTGGCACTCAGAGCACCACCGAGAAGATCC...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTGGCTGCAGGAAGCTaGGATCCGCGGTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSLAAGS*DPRSPS
Trigger: AGAAGGTGACCGCGGATCCCAGCTTCCTGCAGCCAG...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp ACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTGCCCCCAACAGGGGATTaGTCCTGGTGGAAGAACCTT +
Preference number: 4 (lower is better)
Translates to: TRLVQKFTAPVRSLWLELPPTGD*SWWKNL
Trigger: AAGGTTCTTCCACCAGGACCAATCCCCTGTTGGGGG...CAGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp TTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTCCCTTCGATCCGCTCTGCATTaGCCTCGGACAGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: FLGFALNRDWKGVRTLSLRSALH*PRTGKD
Trigger: GTCCTTTCCTGTCCGAGGCCAATGCAGAGCGGATCG...AAGGGAGAGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp TACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTTGGATGCTCAGCATCTaGCCCAGCTTGAGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: YKTCTKIHSACEEPLAGTWMLSI*PSLSAA
Trigger: TGCGGCACTCAAGCTGGGCCAGATGCTGAGCATCCA...AGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp TTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTCCCTTTCACTGTTGATGCTCTaGGCCACGCCAGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: FLGFALNRDWKGVRTLSLSLLML*ATPGYW
Trigger: CCAGTACCCTGGCGTGGCCCAGAGCATCAACAGTGA...AAGGGAGAGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTTCGTTCCGAATCTCCTaGCTGAGCCCTTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSSFRIS*LSPSAW
Trigger: CCAGGCCGAAGGGCTCAGCCAGGAGATTCGGAACGA...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CCCTTATTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTCCACGACCTCGCTACTaGTTTTTGGCCTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PLLGKGVKKSITTTSLLVPRPRY*FLACLR
Trigger: CCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGG...AACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAATAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATAGACTGACCGAGCAGTaGGGCTTCATCTTCATTCTT +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHRLTEQ*GFIFIL
Trigger: AAGAATGAAGATGAAGCCCCACTGCTCGGTCAGTCT...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp ACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTGCTCCAGCCCATCGGCTaGAGAGGAAAAGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: TRLVQKFTAPVRSLWLELLQPIG*RGKGQK
Trigger: TTTCTGCCCTTTTCCTCTCCAGCCGATGGGCTGGAG...CAGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CCCTTATTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTCTCCCACCCTCACTGTaGGGCAGCAGTTCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: PLLGKGVKKSITTTSLLVLPPSL*GSSSLG
Trigger: TCCTAAAGAACTGCTGCCCCACAGTGAGGGTGGGAG...AACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAATAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTGTTTCCACGGCCGCCTaGGTCAGCTTGACAAGGCCT +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSVSTAA*VSLTRP
Trigger: AGGCCTTGTCAAGCTGACCCAGGCGGCCGTGGAAAC...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366777.4
CDS-3UTR GCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCAAGAACATGCCAATCTaGTCCACAGCCGTGGACTGC +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGKNMPI*STAVDC
Trigger: GCAGTCCACGGCTGTGGAGCAGATTGGCATGTTCTT...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CCCTTATTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTGCCTCTTGCAGTAGTTaGTGTAGGCCTCCTCGAACA +
Preference number: 4 (lower is better)
Translates to: PLLGKGVKKSITTTSLLVASCSS*CRPPRT
Trigger: TGTTCGAGGAGGCCTACAGCAACTACTGCAAGAGGC...AACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAATAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp ATTACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACGGACAGGAAAGGACTaGAACCCAGCACGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: ITRLVQKFTAPVRSLWLERTGKD*NPARPS
Trigger: AGAAGGCCGTGCTGGGTTCCAGTCCTTTCCTGTCCG...TTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCGATCCGCTCTGCATTaGCCTCGGACAGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSRSALH*PRTGKD
Trigger: GTCCTTTCCTGTCCGAGGCCAATGCAGAGCGGATCG...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp ATTACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAATGGATGCTCAGCATCTaGCCCAGCTTGAGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: ITRLVQKFTAPVRSLWLEWMLSI*PSLSAA
Trigger: TGCGGCACTCAAGCTGGGCCAGATGCTGAGCATCCA...TTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCATCATCTGCTTCAGTaGCATGAAGTCCGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGHHLLQ*HEVRAL
Trigger: CAGAGCGCGGACTTCATGCCACTGAAGCAGATGATG...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCAGGATGGCATCCAAGTaGGCGTCTTCCATGACCTTG +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGRMASK*ASSMTL
Trigger: CAAGGTCATGGAAGACGCCCACTTGGATGCCATCCT...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTTCTCACCCTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGTGTGGATCTTCTCGGTaGTGCTCTGAGTGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LLTLQPFSNRNRGKRWLRCGSSR*CSECQN
Trigger: ATTTTGGCACTCAGAGCACCACCGAGAAGATCCACA...CCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAGGGTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CTTCTCACCCTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGCACTGAACAGAGATTaGAAGGGAGTAAGGACTCTC +
Preference number: 4 (lower is better)
Translates to: LLTLQPFSNRNRGKRWLRALNRD*KGVRTL
Trigger: GAGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGC...CCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAGGGTGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp TACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTAAGAACATGCCAATCTaGTCCACAGCCGTGGACTGC +
Preference number: 4 (lower is better)
Translates to: YKTCTKIHSACEEPLAGTKNMPI*STAVDC
Trigger: GCAGTCCACGGCTGTGGAGCAGATTGGCATGTTCTT...AGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCTTCGCTGAAAGCCCATaGCAGAGAATGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGFAESP*QRMSLW
Trigger: CCAGAGACTCATTCTCTGCCATGGGCTTTCAGCGAA...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp TACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTAGGATGGCATCCAAGTaGGCGTCTTCCATGACCTTG +
Preference number: 4 (lower is better)
Translates to: YKTCTKIHSACEEPLAGTRMASK*ASSMTL
Trigger: CAAGGTCATGGAAGACGCCCACTTGGATGCCATCCT...AGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCCTGTGAGGAGCCTTTaGCTGGAACTGGTGACACCT +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSPVRSL*LELVTP
Trigger: AGGTGTCACCAGTTCCAGCCAAAGGCTCCTCACAGG...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp TTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTCCCTTTCTTCATGTTTATCCTaGCCCTGCACCTTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: FLGFALNRDWKGVRTLSLSSCLS*PCTFPK
Trigger: CTTGGGGAAGGTGCAGGGTCAGGATAAACATGAAGA...AAGGGAGAGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp TACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTTCTTCATGTTTATCCTaGCCCTGCACCTTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: YKTCTKIHSACEEPLAGTSSCLS*PCTFPK
Trigger: CTTGGGGAAGGTGCAGGGTCAGGATAAACATGAAGA...AGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTGCCCATGGCAGAGAATaGGTCTCTGGGGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSAHGRE*VSGVCK
Trigger: TTTGCAAACCCCAGAGACTCATTCTCTGCCATGGGC...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp TACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTTTCTCGGTGGTGCTCTaGGTGCCAAAATCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: YKTCTKIHSACEEPLAGTFSVVL*VPKSKG
Trigger: GCCTTTTGATTTTGGCACTCAGAGCACCACCGAGAA...AGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp ACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTGCTTCTGGAAGCATGTTaGTCATGTTCAACACGGCCA +
Preference number: 4 (lower is better)
Translates to: TRLVQKFTAPVRSLWLELLLEAC*SCSTRP
Trigger: TGGCCGTGTTGAACATGAGCAACATGCTTCCAGAAG...CAGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCAGTTGGGGTCTGTTTaGATGAAGTGGAACTCGAAC +
Preference number: 4 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGQLGSV*MKWNSN
Trigger: GTTCGAGTTCCACTTCATGCAAACAGACCCCAACTG...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CCCTTATTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTGTCATATTCCCGCGTTaGCCCAAAATCCAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: PLLGKGVKKSITTTSLLVVIFPR*PKIQKS
Trigger: GCTCTTTTGGATTTTGGGGCAACGCGGGAATATGAC...AACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAATAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp CCCTTATTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTCTGTTTGCATGAAGTaGAACTCGAACAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PLLGKGVKKSITTTSLLVSVCMK*NSNSSL
Trigger: GAGGGAGCTGTTCGAGTTCCACTTCATGCAAACAGA...AACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAATAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTACGGGAATCAGGTTGTaGATCTTCTCGGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSTGIRL*IFSVVL
Trigger: GAGCACCACCGAGAAGATCCACAACCTGATTCCCGT...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR TCA 90 bp TACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTGAATGTAGAGGTCGGTaGAGGATCTGTCATATTCCC +
Preference number: 4 (lower is better)
Translates to: YKTCTKIHSACEEPLAGTECRGR*RICHIP
Trigger: GGGAATATGACAGATCCTTCACCGACCTCTACATTC...AGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTTCAGCACATGTGGGCTaGAGAGCTCATCCACAATCT +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSSAHVG*RAHPQS
Trigger: AGATTGTGGATGAGCTCTGCAGCCCACATGTGCTGA...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATAGAAGAAAACAAAGTTaGCCTTTCATCTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHRRKQS*PFIFIC
Trigger: GCAGATGAAGATGAAAGGGCAACTTTGTTTTCTTCT...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTGGGGAACAGGCCTTCTaGAAGCATGTTGCTCATGTT +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSGEQAF*KHVAHV
Trigger: AACATGAGCAACATGCTTCCAGAAGGCCTGTTCCCC...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCAGTTGGGGTCTGTTTaGATGAAGTGGAACTCGAAC +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSQLGSV*MKWNSN
Trigger: GTTCGAGTTCCACTTCATGCAAACAGACCCCAACTG...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCGGTGGTGCTCTGAGTaGCAAAATCAAAAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSRWCSE*QNQKAH
Trigger: ATGAGCCTTTTGATTTTGGCACTCAGAGCACCACCG...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTGGATCTTCTCGGTGGTaGTCTGAGTGCCAAAATCAA +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSGSSRW*SECQNQ
Trigger: TTGATTTTGGCACTCAGAGCACCACCGAGAAGATCC...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp CCCTTATTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTCTTCATCTTCATTCTTaGACTTCTCACCCTACAACC +
Preference number: 4 (lower is better)
Translates to: PLLGKGVKKSITTTSLLVLHLHS*TSHPTT
Trigger: GGTTGTAGGGTGAGAAGTGCAAGAATGAAGATGAAG...AACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAATAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp ATTACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAAGGAACTTCATCTCTATaGATTTCGCCCGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: ITRLVQKFTAPVRSLWLEGTSSL*ISPAQS
Trigger: AGACTGTGCGGGCGAAATCCATAGAGATGAAGTTCC...TTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTAAGATCTTAGCCAGGTaGGGGTTGATAAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSKILAR*GLIKAS
Trigger: TGATGCCTTTATCAACCCCCACCTGGCTAAGATCTT...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTTCATCTTCATTCTTaGACTTCTCACCCTACAACC +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSLHLHS*TSHPTT
Trigger: GGTTGTAGGGTGAGAAGTGCAAGAATGAAGATGAAG...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR GCA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTAGAAGAAAACAAAGTTaGCCTTTCATCTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSRRKQS*PFIFIC
Trigger: GCAGATGAAGATGAAAGGGCAACTTTGTTTTCTTCT...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS GCA 90 bp AGCTGGGATCCGCGGTCACCTTCTAGCCGCCTCCGCGCCCGCCTCTaGGCGCTGGCCACCGCGCTGACGCCCGCCACGCGCTCCGGATCT +
Preference number: 5 (lower is better)
Translates to: SWDPRSPSSRLRARL*ALATALTPATRSGS
Trigger: AGATCCGGAGCGCGTGGCGGGCGTCAGCGCGGTGGCCAGCGCGCAGAGGCGGGCGCGGAGGCGGCTAGAAGGTGACCGCGGATCCCAGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
CDS CCA 90 bp CAGCTCCCGCCTCAGCACGTCGATCAGGTGCTCGGGGAACAGGCCTaGGCCAGGGAGGAGGGCATCAGCGAGGAAGGGGGCTCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: QLPPQHVDQVLGEQA*AREEGISEEGGSAG
Trigger: CCCTGCAGAGCCCCCTTCCTCGCTGATGCCCTCCTCCCTGGCCCAGGCCTGTTCCCCGAGCACCTGATCGACGTGCTGAGGCGGGAGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS TCA 90 bp ATCCTTCAGGGCCTGCAACTGAGGCGCCCCCACTGCGTCCGGACCTaGGGCTCGCGGCCAGCGAAACTCGCGGGGAAGCTGCGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: ILQGLQLRRPHCVRT*GSRPAKLAGKLRCH
Trigger: GTGACAGCGCAGCTTCCCCGCGAGTTTCGCTGGCCGCGAGCCTCAGGTCCGGACGCAGTGGGGGCGCCTCAGTTGCAGGCCCTGAAGGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489044.1
CDS GCA 90 bp GCCGGCCTGGGCGTGGCCCGCAGCCCTACTGCTGGGCCTGCCTCTTaGAGTAGTTGCTGTAGGCCTCCTCGAACATGGCCTTGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: AGLGVARSPTAGPAS*SSCCRPPRTWPCRG
Trigger: TCCCCTGCAAGGCCATGTTCGAGGAGGCCTACAGCAACTACTGCAAGAGGCAGGCCCAGCAGTAGGGCTGCGGGCCACGCCCAGGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000479852.1
ENST00000485462.5
CDS CCA 90 bp TTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCGTaGCCCGCAGCCCTACTGCTGGGCCTGCCTCTTGCAGTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: LACLRERVPAEPAWA*PAALLLGLPLAVVA
Trigger: AGCAACTACTGCAAGAGGCAGGCCCAGCAGTAGGGCTGCGGGCCACGCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000479852.1
ENST00000485462.5
CDS GCA 90 bp GGCGTGGCCCGCAGCCCTACTGCTGGGCCTGCCTCTTGCAGTAGTTaGTGTAGGCCTCCTCGAACATGGCCTTGCAGGGGAAGCGGGCCT +
Preference number: 5 (lower is better)
Translates to: GVARSPTAGPASCSS*CRPPRTWPCRGSGP
Trigger: AGGCCCGCTTCCCCTGCAAGGCCATGTTCGAGGAGGCCTACAGCAACTACTGCAAGAGGCAGGCCCAGCAGTAGGGCTGCGGGCCACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000479852.1
ENST00000485462.5
CDS GCA 90 bp AGGGCCCTGGCCGCCATGATCAGCTCCCCTCCGATGCCCAAGTGCTaGAGGTGGGTTTCCACGGCCGCCTGGGTCAGCTTGACAAGGCCT +
Preference number: 5 (lower is better)
Translates to: RALAAMISSPPMPKC*RWVSTAAWVSLTRP
Trigger: AGGCCTTGTCAAGCTGACCCAGGCGGCCGTGGAAACCCACCTGCAGCACTTGGGCATCGGAGGGGAGCTGATCATGGCGGCCAGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000489044.1
CDS GCA 90 bp TGCAGGGCCCTGGCCGCCATGATCAGCTCCCCTCCGATGCCCAAGTaGTGCAGGTGGGTTTCCACGGCCGCCTGGGTCAGCTTGACAAGG +
Preference number: 5 (lower is better)
Translates to: CRALAAMISSPPMPK*CRWVSTAAWVSLTR
Trigger: CCTTGTCAAGCTGACCCAGGCGGCCGTGGAAACCCACCTGCAGCACTTGGGCATCGGAGGGGAGCTGATCATGGCGGCCAGGGCCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000489044.1
CDS CCA 90 bp TGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTaGGCGTGGCCCGCAGCCCTACTGCTGGGCCTGCCTCTTGCAGTA +
Preference number: 5 (lower is better)
Translates to: WFLACLRERVPAEPA*AWPAALLLGLPLAV
Trigger: TACTGCAAGAGGCAGGCCCAGCAGTAGGGCTGCGGGCCACGCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000479852.1
ENST00000485462.5
CDS GCA 90 bp CTCGCGGCCGCCCTTCATTCGGGCCAAGTGCACCTGCCCAATGGATaGGGCGGCGAAGGGCCGCTCCTCGAAGTATTCCAACTTGTCCCG +
Preference number: 5 (lower is better)
Translates to: LAAALHSGQVHLPNG*GGEGPLLEVFQLVP
Trigger: CGGGACAAGTTGGAATACTTCGAGGAGCGGCCCTTCGCCGCCGCATCCATTGGGCAGGTGCACTTGGCCCGAATGAAGGGCGGCCGCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS GCA 90 bp TTCATGGCCACCTCGCGGCCGCCCTTCATTCGGGCCAAGTGCACCTaGCCAATGGATGCGGCGGCGAAGGGCCGCTCCTCGAAGTATTCC +
Preference number: 5 (lower is better)
Translates to: FMATSRPPFIRAKCT*PMDAAAKGRSSKYS
Trigger: GGAATACTTCGAGGAGCGGCCCTTCGCCGCCGCATCCATTGGGCAGGTGCACTTGGCCCGAATGAAGGGCGGCCGCGAGGTGGCCATGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS GCA 90 bp TGCCGTGACCTGGACCCCATCACAGCCTCGTTGTCCACCTACTCCTaGCTCACCTCACCCCTGGGAACAGCTCACGGCCACCCTCCCACC +
Preference number: 5 (lower is better)
Translates to: CRDLDPITASLSTYS*LTSPLGTAHGHPPT
Trigger: GGTGGGAGGGTGGCCGTGAGCTGTTCCCAGGGGTGAGGTGAGGCAGGAGTAGGTGGACAACGAGGCTGTGATGGGGTCCAGGTCACGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS CCA 90 bp AATGACACAGGGCGAACCTGGGGATTAAAGTGTGCGCCCAGGACCTaGGCGGGCACACTCCTGGGATGCCCTGGCCACCACACCCTCCCC +
Preference number: 5 (lower is better)
Translates to: NDTGRTWGLKCAPRT*AGTLLGCPGHHTLP
Trigger: GGGGAGGGTGTGGTGGCCAGGGCATCCCAGGAGTGTGCCCGCCCAGGTCCTGGGCGCACACTTTAATCCCCAGGTTCGCCCTGTGTCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS TCA 90 bp TGCCAATCTGCTCCACAGCCGTGGACTGCAGGGCCCTGGCCGCCATaGTCAGCTCCCCTCCGATGCCCAAGTGCTGCAGGTGGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: CQSAPQPWTAGPWPP*SAPLRCPSAAGGFP
Trigger: TGGAAACCCACCTGCAGCACTTGGGCATCGGAGGGGAGCTGATCATGGCGGCCAGGGCCCTGCAGTCCACGGCTGTGGAGCAGATTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000489044.1
CDS GCA 90 bp GAGTGCCGCACCACGCACCTTGCAGAGCGTGCGCACGATCCGCTCTaGATTGGCCTCGGACAGGAAAGGACTGGAACCCAGCACGGCCTT +
Preference number: 5 (lower is better)
Translates to: ECRTTHLAERAHDPL*IGLGQERTGTQHGL
Trigger: AAGGCCGTGCTGGGTTCCAGTCCTTTCCTGTCCGAGGCCAATGCAGAGCGGATCGTGCGCACGCTCTGCAAGGTGCGTGGTGCGGCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS CCA 90 bp CCGCACCACGCACCTTGCAGAGCGTGCGCACGATCCGCTCTGCATTaGCCTCGGACAGGAAAGGACTGGAACCCAGCACGGCCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: PHHAPCRACARSALH*PRTGKDWNPARPSS
Trigger: GGAAGAAGGCCGTGCTGGGTTCCAGTCCTTTCCTGTCCGAGGCCAATGCAGAGCGGATCGTGCGCACGCTCTGCAAGGTGCGTGGTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS CCA 90 bp CCACCTCGCGGCCGCCCTTCATTCGGGCCAAGTGCACCTGCCCAATaGATGCGGCGGCGAAGGGCCGCTCCTCGAAGTATTCCAACTTGT +
Preference number: 5 (lower is better)
Translates to: PPRGRPSFGPSAPAQ*MRRRRAAPRSIPTC
Trigger: ACAAGTTGGAATACTTCGAGGAGCGGCCCTTCGCCGCCGCATCCATTGGGCAGGTGCACTTGGCCCGAATGAAGGGCGGCCGCGAGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS CCA 90 bp CTGGCCGCCATGATCAGCTCCCCTCCGATGCCCAAGTGCTGCAGGTaGGTTTCCACGGCCGCCTGGGTCAGCTTGACAAGGCCTTTAGCC +
Preference number: 5 (lower is better)
Translates to: LAAMISSPPMPKCCR*VSTAAWVSLTRPLA
Trigger: GGCTAAAGGCCTTGTCAAGCTGACCCAGGCGGCCGTGGAAACCCACCTGCAGCACTTGGGCATCGGAGGGGAGCTGATCATGGCGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000489044.1
CDS GCA 90 bp TCGGGAGCGGAGGCTGAAGAGAAGTCTGTGGAGGCTCCGGCTGCATaGGGGACTGAGAAGTGGAACTCCCCTTCTGGGCCGCCGAAGTTC +
Preference number: 5 (lower is better)
Translates to: SGAEAEEKSVEAPAA*GTEKWNSPSGPPKF
Trigger: GAACTTCGGCGGCCCAGAAGGGGAGTTCCACTTCTCAGTCCCGCATGCAGCCGGAGCCTCCACAGACTTCTCTTCAGCCTCCGCTCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS GCA 90 bp CTGAGCGTCTGTTTGTGCTGCTTGTTCTCGGGGCGAGCCTTAGCCTaGCGGGCCTTCTCAATGTCCTCGGCTGTGAGGCCCCCAACAGGG +
Preference number: 5 (lower is better)
Translates to: LSVCLCCLFSGRALA*RAFSMSSAVRPPTG
Trigger: CCCTGTTGGGGGCCTCACAGCCGAGGACATTGAGAAGGCCCGGCAGGCTAAGGCTCGCCCCGAGAACAAGCAGCACAAACAGACGCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS GCA 90 bp CCCCAGCCCACACCCTGGAGAACCAGAGCTAAGACCCAGCCATGCTaGCGTGACCTGGACCCCATCACAGCCTCGTTGTCCACCTACTCC +
Preference number: 5 (lower is better)
Translates to: PQPTPWRTRAKTQPC*RDLDPITASLSTYS
Trigger: GGAGTAGGTGGACAACGAGGCTGTGATGGGGTCCAGGTCACGGCAGCATGGCTGGGTCTTAGCTCTGGTTCTCCAGGGTGTGGGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS GCA 90 bp TGGCCCCAGCCCACACCCTGGAGAACCAGAGCTAAGACCCAGCCATaGTGCCGTGACCTGGACCCCATCACAGCCTCGTTGTCCACCTAC +
Preference number: 5 (lower is better)
Translates to: WPQPTPWRTRAKTQP*CRDLDPITASLSTY
Trigger: GTAGGTGGACAACGAGGCTGTGATGGGGTCCAGGTCACGGCAGCATGGCTGGGTCTTAGCTCTGGTTCTCCAGGGTGTGGGCTGGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS CCA 90 bp ATGGGGGCGCTGACTGGTCGGGAGCGGAGGCTGAAGAGAAGTCTGTaGAGGCTCCGGCTGCATGCGGGACTGAGAAGTGGAACTCCCCTT +
Preference number: 5 (lower is better)
Translates to: MGALTGRERRLKRSL*RLRLHAGLRSGTPL
Trigger: AAGGGGAGTTCCACTTCTCAGTCCCGCATGCAGCCGGAGCCTCCACAGACTTCTCTTCAGCCTCCGCTCCCGACCAGTCAGCGCCCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS CCA 90 bp CAATCTCAGGCACATAGAAGAAGGGGTGGCCCTTCAGCAGGTCCCTaGGTAGGGGAGGGAGGTCACGCCCTAGCCACAGGCCCTCCACAC +
Preference number: 5 (lower is better)
Translates to: QSQAHRRRGGPSAGP*VGEGGHALATGPPH
Trigger: GTGTGGAGGGCCTGTGGCTAGGGCGTGACCTCCCTCCCCTACCCAGGGACCTGCTGAAGGGCCACCCCTTCTTCTATGTGCCTGAGATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478406.5
ENST00000479852.1
CDS CCA 90 bp CCATCACAGCCTCGTTGTCCACCTACTCCTGCCTCACCTCACCCCTaGGAACAGCTCACGGCCACCCTCCCACCAGCTCTGGCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: PSQPRCPPTPASPHP*EQLTATLPPALAPK
Trigger: TTTTGGGGCCAGAGCTGGTGGGAGGGTGGCCGTGAGCTGTTCCCAGGGGTGAGGTGAGGCAGGAGTAGGTGGACAACGAGGCTGTGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS-3UTR CAA 90 bp AGGCCTGGGCCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACGCAAAGAGCCTCCCGTaGGCCCTGCCCAGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: RPGPRRLKEHLLALLAQHAKSLP*ALPRGE
Trigger: CTCCCCTCTGGGCAGGGCCAACGGGAGGCTCTTTGC...GTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGGCCCAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp AGGCCTGGGCCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACGCCGCACCACGCACCTaGCAGAGCGTGCGCACGATC +
Preference number: 5 (lower is better)
Translates to: RPGPRRLKEHLLALLAQHAAPRT*QSVRTI
Trigger: GATCGTGCGCACGCTCTGCAAGGTGCGTGGTGCGGC...GTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGGCCCAGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS GCA 90 bp GGAGATGCCACAGCTGTAGGGTGGGCCACATTGAGCTCCTCCTTCTaGAGGCAGAGGTGTGTCCCCCTCATCACCCTCCATCAGGACCCC +
Preference number: 5 (lower is better)
Translates to: GDATAVGWATLSSSF*RQRCVPLITLHQDP
Trigger: GGGGTCCTGATGGAGGGTGATGAGGGGGACACACCTCTGCCTGCAGAAGGAGGAGCTCAATGTGGCCCACCCTACAGCTGTGGCATCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476488.1
CDS CCA 90 bp TCCCCTCCGATGCCCAAGTGCTGCAGGTGGGTTTCCACGGCCGCCTaGGTCAGCTTGACAAGGCCTTTAGCCACCATGATGGTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: SPPMPKCCRWVSTAA*VSLTRPLATMMVSP
Trigger: GGGAGACACCATCATGGTGGCTAAAGGCCTTGTCAAGCTGACCCAGGCGGCCGTGGAAACCCACCTGCAGCACTTGGGCATCGGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000489044.1
CDS CCA 90 bp GGGCAGGTGGATCCACAGGTTACCGGAGATGCCACAGCTGTAGGGTaGGCCACATTGAGCTCCTCCTTCTGCAGGCAGAGGTGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: GQVDPQVTGDATAVG*ATLSSSFCRQRCVP
Trigger: GGGGACACACCTCTGCCTGCAGAAGGAGGAGCTCAATGTGGCCCACCCTACAGCTGTGGCATCTCCGGTAACCTGTGGATCCACCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476488.1
CDS GCA 90 bp GACAAGCCCACGAGAGGGGCAGGTGGATCCACAGGTTACCGGAGATaGCACAGCTGTAGGGTGGGCCACATTGAGCTCCTCCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: DKPTRGAGGSTGYRR*HSCRVGHIELLLLQ
Trigger: CTGCAGAAGGAGGAGCTCAATGTGGCCCACCCTACAGCTGTGGCATCTCCGGTAACCTGTGGATCCACCTGCCCCTCTCGTGGGCTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476488.1
CDS CCA 90 bp CACCCTGGAGAACCAGAGCTAAGACCCAGCCATGCTGCCGTGACCTaGACCCCATCACAGCCTCGTTGTCCACCTACTCCTGCCTCACCT +
Preference number: 5 (lower is better)
Translates to: HPGEPELRPSHAAVT*TPSQPRCPPTPASP
Trigger: AGGTGAGGCAGGAGTAGGTGGACAACGAGGCTGTGATGGGGTCCAGGTCACGGCAGCATGGCTGGGTCTTAGCTCTGGTTCTCCAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS-3UTR CAA 90 bp CCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCTCTCCCAGGCCAGACCTCCGAAGTaGGCCAGCCGGCCAATCCTC +
Preference number: 5 (lower is better)
Translates to: PRRLKEHLLALLAQHLSQARPPK*ASRPIL
Trigger: GAGGATTGGCCGGCTGGCCAACTTCGGAGGTCTGGC...CTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS CCA 90 bp GGTGGAAGAACCTTCGCTGAAAGCCCATGGCAGAGAATGAGTCTCTaGGGTTTGCAAAGAGCCTCCCGTTGGCCCTGCCCAGAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: GGRTFAESPWQRMSL*GLQRASRWPCPEGR
Trigger: CCTCCCCTCTGGGCAGGGCCAACGGGAGGCTCTTTGCAAACCCCAGAGACTCATTCTCTGCCATGGGCTTTCAGCGAAGGTTCTTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS-3UTR CAA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATGCCGCACCACGCACCTaGCAGAGCGTGCGCACGATC +
Preference number: 5 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHAAPRT*QSVRTI
Trigger: GATCGTGCGCACGCTCTGCAAGGTGCGTGGTGCGGC...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCTTAGCCAGGTGGGGGTaGATAAAGGCATCATCCTGG +
Preference number: 5 (lower is better)
Translates to: LLVFGLSEGESSRGAGLGLARWG*IKASSW
Trigger: CCAGGATGATGCCTTTATCAACCCCCACCTGGCTAA...GCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CCTTCCAGCAGCAGCGAGCCTGTGTCTGGCATTCCCTGTTCCGCTGCTCCCACCTTGTTGACATCACTGTaGATGCTCTGGGCCACGCCA +
Preference number: 5 (lower is better)
Translates to: PSSSSEPVSGIPCSAAPTLLTSL*MLWATP
Trigger: TGGCGTGGCCCAGAGCATCAACAGTGATGTCAACAA...GGTGGGAGCAGCGGAACAGGGAATGCCAGACACAGGCTCGCTGCTGCTGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGCCTCGCTACTGGTTTTaGGCCTGTCTGAGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: RPRYWFLACLRERVPAEPPRYWF*ACLRER
Trigger: TCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGG...CGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCTCTCCCAGGCCGCCTGGGTCAGCTaGACAAGGCCTTTAGCCACC +
Preference number: 5 (lower is better)
Translates to: PRRLKEHLLALLAQHLSQAAWVS*TRPLAT
Trigger: GGTGGCTAAAGGCCTTGTCAAGCTGACCCAGGCGGC...CTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366777.4
CDS TCA 90 bp GGTCCCCAGAACCCAACACAGATGCCTGCCACCCACTCCTGCCCTTaGCCCAACCACCTAGCCTCAGACCTTCTGGAAGCATGTTGCTCA +
Preference number: 5 (lower is better)
Translates to: GPQNPTQMPATHSCP*PNHLASDLLEACCS
Trigger: TGAGCAACATGCTTCCAGAAGGTCTGAGGCTAGGTGGTTGGGTCAAGGGCAGGAGTGGGTGGCAGGCATCTGTGTTGGGTTCTGGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS GCA 90 bp CCAGGGGGAAGCCAGACACCAGCTCTGTGGTCAGCACATGTGGGCTaGAGAGCTCATCCACAATCTCAGGCACATAGAAGAAGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: PGGSQTPALWSAHVG*RAHPQSQAHRRRGG
Trigger: GCCACCCCTTCTTCTATGTGCCTGAGATTGTGGATGAGCTCTGCAGCCCACATGTGCTGACCACAGAGCTGGTGTCTGGCTTCCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000479852.1
ENST00000485462.5
CDS-3UTR CAA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATAGCAGGTCCCTGAACTaGCGGGCACAGGCGGCCTCT +
Preference number: 5 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHSRSLN*RAQAAS
Trigger: AGAGGCCGCCTGTGCCCGCAAGTTCAGGGACCTGCT...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp GGTGACACCTGTGCCTCTCCGGACAGAGGAAGGAAGTCCCACCCCGCCTTCCAGCTTAAGGAGCACTTGTaGGCACTGTTAGCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: GDTCASPDRGRKSHPAFQLKEHL*ALLAQH
Trigger: GTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAG...CTGGAAGGCGGGGTGGGACTTCCTTCCTCTGTCCGGAGAGGCACAGGTGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCAGGCTTAAGGAGCACTaGTTGGCACTGTTAGCTCAG +
Preference number: 5 (lower is better)
Translates to: LLVFGLSEGESSRGAGLGRLKEH*LALLAQ
Trigger: CTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCT...GCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS TCA 90 bp TTGGTCCTGGTGGAAGAACCTTCGCTGAAAGCCCATGGCAGAGAATaGGTCTCTGGGGTTTGCAAAGAGCCTCCCGTTGGCCCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LVLVEEPSLKAHGRE*VSGVCKEPPVGPAQ
Trigger: CTGGGCAGGGCCAACGGGAGGCTCTTTGCAAACCCCAGAGACTCATTCTCTGCCATGGGCTTTCAGCGAAGGTTCTTCCACCAGGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS CCA 90 bp ATAAAGGCATCATCTGGAAGGCAGGAGAATGACACAGGGCGAACCTaGGGATTAAAGTGTGCGCCCAGGACCTGGGCGGGCACACTCCTG +
Preference number: 5 (lower is better)
Translates to: IKASSGRQENDTGRT*GLKCAPRTWAGTLL
Trigger: CAGGAGTGTGCCCGCCCAGGTCCTGGGCGCACACTTTAATCCCCAGGTTCGCCCTGTGTCATTCTCCTGCCTTCCAGATGATGCCTTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS CCA 90 bp ATGTTCAACACGGCCATGAGGTTGTTGACATCACTGTTGATGCTCTaGGCCACGCCAGGGTACTGTGGGGGTATGGGTGAGGCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: MFNTAMRLLTSLLML*ATPGYCGGMGEAGE
Trigger: CTCCCCTGCCTCACCCATACCCCCACAGTACCCTGGCGTGGCCCAGAGCATCAACAGTGATGTCAACAACCTCATGGCCGTGTTGAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS-3UTR CAA 90 bp AGGCCTGGGCCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACATGAGTCTCTGGGGTTaGCAAAGAGCCTCCCGTTGG +
Preference number: 5 (lower is better)
Translates to: RPGPRRLKEHLLALLAQHMSLWG*QRASRW
Trigger: CCAACGGGAGGCTCTTTGCAAACCCCAGAGACTCAT...GTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGGCCCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCTCTCCCAGACGATCCGCTCTGCATaGGCCTCGGACAGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: PRRLKEHLLALLAQHLSQTIRSA*ASDRKG
Trigger: TCCTTTCCTGTCCGAGGCCAATGCAGAGCGGATCGT...CTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCTCCAGGAACTTGTCCCGCCAGTaGGGGCCCAGGTCGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LQPFSNRNRGKRWLRGSRNLSRQ*GPRSLL
Trigger: CAACAACGACCTGGGCCCCAACTGGCGGGACAAGTT...CCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGACGGCCATGAGGTTGTaGACATCACTGTTGATGCTC +
Preference number: 5 (lower is better)
Translates to: RPRYWFLACLRERVPAEPTAMRL*TSLLML
Trigger: GAGCATCAACAGTGATGTCAACAACCTCATGGCCGT...CGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCAAGAAGTTGGACCAGTaGGGGTCTGTTTGCATGAAG +
Preference number: 5 (lower is better)
Translates to: LLVFGLSEGESSRGAGLGKKLDQ*GSVCMK
Trigger: CTTCATGCAAACAGACCCCAACTGGTCCAACTTCTT...GCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTGGGCTGCACTGAACAGAGATaGGAAGGGAGTAAGGACTCT +
Preference number: 5 (lower is better)
Translates to: LLVFGLSEGESSRGAGLGCTEQR*EGSKDS
Trigger: AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCA...GCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGCTTAAGGAGCACTTGTaGGCACTGTTAGCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: RPRYWFLACLRERVPAEPLKEHL*ALLAQH
Trigger: GTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAG...CGGCTCCGCGGGAACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS TCA 90 bp AGCCAGGTGGGGGTTGATAAAGGCATCATCTGGAAGGCAGGAGAATaGCACAGGGCGAACCTGGGGATTAAAGTGTGCGCCCAGGACCTG +
Preference number: 5 (lower is better)
Translates to: SQVGVDKGIIWKAGE*HRANLGIKVCAQDL
Trigger: CAGGTCCTGGGCGCACACTTTAATCCCCAGGTTCGCCCTGTGTCATTCTCCTGCCTTCCAGATGATGCCTTTATCAACCCCCACCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS-3UTR CAA 90 bp CTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCTCCAGGTCGAAGTATTCCAACTaGTCCCGCCAGTTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: LQPFSNRNRGKRWLRGSRSKYSN*SRQLGP
Trigger: GGGCCCCAACTGGCGGGACAAGTTGGAATACTTCGA...CCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTGCAAAGAGCCTCCCGTaGGCCCTGCCCAGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: YKTCTKIHSACEEPLAGTAKSLP*ALPRGE
Trigger: CTCCCCTCTGGGCAGGGCCAACGGGAGGCTCTTTGC...AGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp AAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCCTGTCTGAGGGAGAGAGTTCGCTGAGCGTCTGTTaGTGCTGCTTGTTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: KSITTTSLLVFGLSEGESSLSVC*CCLFSG
Trigger: CCCCGAGAACAAGCAGCACAAACAGACGCTCAGCGA...ACTCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATTCGCTGAGCGTCTGTTaGTGCTGCTTGTTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHSLSVC*CCLFSG
Trigger: CCCCGAGAACAAGCAGCACAAACAGACGCTCAGCGA...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCGAGCGCAGGCTCTTCTaGGCGACCTCTGCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGERRLF*ATSASA
Trigger: GGCACTGGCAGAGGTCGCCAAGAAGAGCCTGCGCTC...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCAGCATCTGGCCCAGCTaGAGTGCCGCACCACGCACC +
Preference number: 5 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGSIWPS*SAAPRT
Trigger: GGTGCGTGGTGCGGCACTCAAGCTGGGCCAGATGCT...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CCCTTATTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTCCTCGAACATGGCCTaGCAGGGGAAGCGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PLLGKGVKKSITTTSLLVSSNMA*QGKRAF
Trigger: GAAGGCCCGCTTCCCCTGCAAGGCCATGTTCGAGGA...AACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAATAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp ACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTGGCCCCCAACAGGGGATaGGTCCTGGTGGAAGAACCT +
Preference number: 5 (lower is better)
Translates to: TRLVQKFTAPVRSLWLELAPNRG*VLVEEP
Trigger: AGGTTCTTCCACCAGGACCAATCCCCTGTTGGGGGC...CAGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp ATTACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAAGCCAGACCTCCGAAGTaGGCCAGCCGGCCAATCCTC +
Preference number: 5 (lower is better)
Translates to: ITRLVQKFTAPVRSLWLEARPPK*ASRPIL
Trigger: GAGGATTGGCCGGCTGGCCAACTTCGGAGGTCTGGC...TTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTGAGCGCAGGCTCTTCTaGGCGACCTCTGCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSERRLF*ATSASA
Trigger: GGCACTGGCAGAGGTCGCCAAGAAGAGCCTGCGCTC...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTAGCATCTGGCCCAGCTaGAGTGCCGCACCACGCACC +
Preference number: 5 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSSIWPS*SAAPRT
Trigger: GGTGCGTGGTGCGGCACTCAAGCTGGGCCAGATGCT...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGGGCTCCAGGTTGGGGCCCAGGTCGTaGTTGAGAGTTTTCATCATC +
Preference number: 5 (lower is better)
Translates to: LQPFSNRNRGKRWLRGSRLGPRS*LRVFII
Trigger: GATGATGAAAACTCTCAACAACGACCTGGGCCCCAA...CCTGGAGCCCCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCAACTTGTCCCGCCAGTaGGGGCCCAGGTCGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGNLSRQ*GPRSLL
Trigger: CAACAACGACCTGGGCCCCAACTGGCGGGACAAGTT...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CCTCGCAGGCTTAAGGAGCACTTGTTGGCACTGTTAGCTCAGCACCTCTCCCAGAACACGGCCATGAGGTaGTTGACATCACTGTTGATG +
Preference number: 5 (lower is better)
Translates to: PRRLKEHLLALLAQHLSQNTAMR*LTSLLM
Trigger: CATCAACAGTGATGTCAACAACCTCATGGCCGTGTT...CTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCTGCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp ATTACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAAAGCAGGTCCCTGAACTaGCGGGCACAGGCGGCCTCT +
Preference number: 5 (lower is better)
Translates to: ITRLVQKFTAPVRSLWLESRSLN*RAQAAS
Trigger: AGAGGCCGCCTGTGCCCGCAAGTTCAGGGACCTGCT...TTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTCCCTTTCCTCGAACATGGCCTaGCAGGGGAAGCGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: FLGFALNRDWKGVRTLSLSSNMA*QGKRAF
Trigger: GAAGGCCCGCTTCCCCTGCAAGGCCATGTTCGAGGA...AAGGGAGAGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCACGATCCGCTCTGCATaGGCCTCGGACAGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGTIRSA*ASDRKG
Trigger: TCCTTTCCTGTCCGAGGCCAATGCAGAGCGGATCGT...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CTTCTCACCCTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGCCTTCTGGAAGCATGTaGCTCATGTTCAACACGGCC +
Preference number: 5 (lower is better)
Translates to: LLTLQPFSNRNRGKRWLRPSGSM*LMFNTA
Trigger: GGCCGTGTTGAACATGAGCAACATGCTTCCAGAAGG...CCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAGGGTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCAAGCGGGCCTTCAGCTaGGAGCAGATGAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGKRAFS*EQMRKE
Trigger: CTCCTTCCTCATCTGCTCCAAGCTGAAGGCCCGCTT...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCATGAGTCTCTGGGGTTaGCAAAGAGCCTCCCGTTGG +
Preference number: 5 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGMSLWG*QRASRW
Trigger: CCAACGGGAGGCTCTTTGCAAACCCCAGAGACTCAT...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CCCTTATTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTGTCTGTTTGTGCTGCTaGTTCTCGGGGCGAGCCTTA +
Preference number: 5 (lower is better)
Translates to: PLLGKGVKKSITTTSLLVVCLCC*FSGRAL
Trigger: TAAGGCTCGCCCCGAGAACAAGCAGCACAAACAGAC...AACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAATAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTTCGAAGTATTCCAACTaGTCCCGCCAGTTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: YKTCTKIHSACEEPLAGTSKYSN*SRQLGP
Trigger: GGGCCCCAACTGGCGGGACAAGTTGGAATACTTCGA...AGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp ATTTCAGAGGACACACGGAGGCAGACTGACCGAGCAGTGGGGCTTCATCTTCATAAGAAGTTGGACCAGTaGGGGTCTGTTTGCATGAAG +
Preference number: 5 (lower is better)
Translates to: ISEDTRRQTDRAVGLHLHKKLDQ*GSVCMK
Trigger: CTTCATGCAAACAGACCCCAACTGGTCCAACTTCTT...ATGAAGATGAAGCCCCACTGCTCGGTCAGTCTGCCTCCGTGTGTCCTCTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp ACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTGCCTCGCTACTGGTTTTaGGCCTGTCTGAGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: TRLVQKFTAPVRSLWLELPRYWF*ACLRER
Trigger: TCTCTCCCTCAGACAGGCCAAAAACCAGTAGCGAGG...CAGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCGGGCCCAGGTCGTTGTaGAGAGTTTTCATCATCTGC +
Preference number: 5 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGGPRSL*RVFIIC
Trigger: GCAGATGATGAAAACTCTCAACAACGACCTGGGCCC...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCTTGTTGACATCACTGTaGATGCTCTGGGCCACGCCA +
Preference number: 5 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGLLTSL*MLWATP
Trigger: TGGCGTGGCCCAGAGCATCAACAGTGATGTCAACAA...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp CTTCTCACCCTACAACCATTTAGCAACAGAAACCGTGGAAAGCGCTGGCTACGGAACACGGCCATGAGGTaGTTGACATCACTGTTGATG +
Preference number: 5 (lower is better)
Translates to: LLTLQPFSNRNRGKRWLRNTAMR*LTSLLM
Trigger: CATCAACAGTGATGTCAACAACCTCATGGCCGTGTT...CCGTAGCCAGCGCTTTCCACGGTTTCTGTTGCTAAATGGTTGTAGGGTGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TTGGGCAAAGGAGTTAAAAAGAGCATCACCACGACCTCGCTACTGGTTTTTGGCATGACGGGAATCAGGTaGTGGATCTTCTCGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LGKGVKKSITTTSLLVFGMTGIR*WIFSVV
Trigger: CACCACCGAGAAGATCCACAACCTGATTCCCGTCAT...GCCAAAAACCAGTAGCGAGGTCGTGGTGATGCTCTTTTTAACTCCTTTGCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTAAGCGGGCCTTCAGCTaGGAGCAGATGAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSKRAFS*EQMRKE
Trigger: CTCCTTCCTCATCTGCTCCAAGCTGAAGGCCCGCTT...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTCCCTTTTAGCCAGGTGGGGGTaGATAAAGGCATCATCCTGG +
Preference number: 5 (lower is better)
Translates to: FLGFALNRDWKGVRTLSLLARWG*IKASSW
Trigger: CCAGGATGATGCCTTTATCAACCCCCACCTGGCTAA...AAGGGAGAGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTGGGCCCAGGTCGTTGTaGAGAGTTTTCATCATCTGC +
Preference number: 5 (lower is better)
Translates to: YKTCTKIHSACEEPLAGTGPRSL*RVFIIC
Trigger: GCAGATGATGAAAACTCTCAACAACGACCTGGGCCC...AGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp ACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAACTGTTGGGGCCCAGGTCGTaGTTGAGAGTTTTCATCATC +
Preference number: 5 (lower is better)
Translates to: TRLVQKFTAPVRSLWLELLGPRS*LRVFII
Trigger: GATGATGAAAACTCTCAACAACGACCTGGGCCCCAA...CAGTTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp GTTCATGTTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCCTTCTGGAAGCATGTaGCTCATGTTCAACACGGCC +
Preference number: 5 (lower is better)
Translates to: VHVSGFCTEQRLEGSKDSPSGSM*LMFNTA
Trigger: GGCCGTGTTGAACATGAGCAACATGCTTCCAGAAGG...AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAACATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp ATTACAAGACTTGTACAAAAATTCACAGCGCCTGTGAGGAGCCTTTGGCTGGAAATGACGGGAATCAGGTaGTGGATCTTCTCGGTGGTG +
Preference number: 5 (lower is better)
Translates to: ITRLVQKFTAPVRSLWLEMTGIR*WIFSVV
Trigger: CACCACCGAGAAGATCCACAACCTGATTCCCGTCAT...TTCCAGCCAAAGGCTCCTCACAGGCGCTGTGAATTTTTGTACAAGTCTTGTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTCCCTTAGGCTTAAGGAGCACTaGTTGGCACTGTTAGCTCAG +
Preference number: 5 (lower is better)
Translates to: FLGFALNRDWKGVRTLSLRLKEH*LALLAQ
Trigger: CTGAGCTAACAGTGCCAACAAGTGCTCCTTAAGCCT...AAGGGAGAGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS-3UTR CAA 90 bp TTTCTGGGTTTTGCACTGAACAGAGATTGGAAGGGAGTAAGGACTCTCTCCCTTTGCACTGAACAGAGATaGGAAGGGAGTAAGGACTCT +
Preference number: 5 (lower is better)
Translates to: FLGFALNRDWKGVRTLSLCTEQR*EGSKDS
Trigger: AGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCA...AAGGGAGAGAGTCCTTACTCCCTTCCAATCTCTGTTCAGTGCAAAACCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000366778.5
CDS TCA 72 bp GCCTCCGCGCCCGCCTCTGCGCGCTGGCCACCGCGCTaGCGCCCGCCACGCGCTCCGGATCTGTTTACCAAC +
Preference number: 6 (lower is better)
Translates to: ASAPASARWPPR*RPPRAPDLFTN
Trigger: GTTGGTAAACAGATCCGGAGCGCGTGGCGGGCGTCAGCGCGGTGGCCAGCGCGCAGAGGCGGGCGCGGAGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366778.5
CDS CCA 72 bp GCCTGTCTGAGGGAGAGAGTTCCCGCGGAGCCGGCCTaGGCGTGGCCCGCAGCCCTACTGCTGGGCCTGCCT +
Preference number: 6 (lower is better)
Translates to: ACLRERVPAEPA*AWPAALLLGLP
Trigger: AGGCAGGCCCAGCAGTAGGGCTGCGGGCCACGCCCAGGCCGGCTCCGCGGGAACTCTCTCCCTCAGACAGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000479852.1
ENST00000485462.5
CDS TCA 72 bp GGCCTGCAACTGAGGCGCCCCCACTGCGTCCGGACCTaGGGCTCGCGGCCAGCGAAACTCGCGGGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: GLQLRRPHCVRT*GSRPAKLAGKL
Trigger: CAGCTTCCCCGCGAGTTTCGCTGGCCGCGAGCCTCAGGTCCGGACGCAGTGGGGGCGCCTCAGTTGCAGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489044.1
CDS GCA 72 bp GGGGTCCTCGGAGCGCAGGCTCTTCTTGGCGACCTCTaGCAGTGCCCCGAAGCCCAGGCCCACGGCCAGACC +
Preference number: 6 (lower is better)
Translates to: GVLGAQALLGDL*QCPEAQAHGQT
Trigger: GGTCTGGCCGTGGGCCTGGGCTTCGGGGCACTGGCAGAGGTCGCCAAGAAGAGCCTGCGCTCCGAGGACCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
ENST00000489044.1
CDS GCA 72 bp TGCCAGTGCCCCGAAGCCCAGGCCCACGGCCAGACCTaGAAGGAGGAGGGGGCGGGCACTCAGTGCTCACGC +
Preference number: 6 (lower is better)
Translates to: CQCPEAQAHGQT*KEEGAGTQCSR
Trigger: GCGTGAGCACTGAGTGCCCGCCCCCTCCTCCTTGCAGGTCTGGCCGTGGGCCTGGGCTTCGGGGCACTGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485462.5
CDS GCA 72 bp ACCTCGCGGCCGCCCTTCATTCGGGCCAAGTGCACCTaGCCAATGGATGCGGCGGCGAAGGGCCGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: TSRPPFIRAKCT*PMDAAAKGRSS
Trigger: CGAGGAGCGGCCCTTCGCCGCCGCATCCATTGGGCAGGTGCACTTGGCCCGAATGAAGGGCGGCCGCGAGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS GCA 72 bp ATGGCCACCTCGCGGCCGCCCTTCATTCGGGCCAAGTaGACCTGCCCAATGGATGCGGCGGCGAAGGGCCGC +
Preference number: 6 (lower is better)
Translates to: MATSRPPFIRAK*TCPMDAAAKGR
Trigger: GCGGCCCTTCGCCGCCGCATCCATTGGGCAGGTGCACTTGGCCCGAATGAAGGGCGGCCGCGAGGTGGCCAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS TCA 72 bp TGCAAACACGCAAGGGGCCCGGCCGGGGGCCACACCTaGACTTGCGGGCACAGGCGGCCTCTCGCTGGTAGT +
Preference number: 6 (lower is better)
Translates to: CKHARGPAGGHT*TCGHRRPLAGS
Trigger: ACTACCAGCGAGAGGCCGCCTGTGCCCGCAAGTTCAGGTGTGGCCCCCGGCCGGGCCCCTTGCGTGTTTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478406.5
ENST00000479852.1
CDS TCA 72 bp GCTCTGGGCCACGCCAGGGTACTGTGGGGGTATGGGTaGGGCAGGGGAGTTAGCCCAGGGAGACGGGTGGGC +
Preference number: 6 (lower is better)
Translates to: ALGHARVLWGYG*GRGVSPGRRVG
Trigger: GCCCACCCGTCTCCCTGGGCTAACTCCCCTGCCTCACCCATACCCCCACAGTACCCTGGCGTGGCCCAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS TCA 72 bp GCTCCACAGCCGTGGACTGCAGGGCCCTGGCCGCCATaGTCAGCTCCCCTCCGATGCCCAAGTGCTGCAGGT +
Preference number: 6 (lower is better)
Translates to: APQPWTAGPWPP*SAPLRCPSAAG
Trigger: ACCTGCAGCACTTGGGCATCGGAGGGGAGCTGATCATGGCGGCCAGGGCCCTGCAGTCCACGGCTGTGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000489044.1
CDS GCA 72 bp CGCTCCCGGGCATGCTCGCTGAGCGTCTGTTTGTGCTaGTTGTTCTCGGGGCGAGCCTTAGCCTGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: RSRACSLSVCLC*LFSGRALACRA
Trigger: GGCCCGGCAGGCTAAGGCTCGCCCCGAGAACAAGCAGCACAAACAGACGCTCAGCGAGCATGCCCGGGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS CCA 72 bp GGGCGAACCTGGGGATTAAAGTGTGCGCCCAGGACCTaGGCGGGCACACTCCTGGGATGCCCTGGCCACCAC +
Preference number: 6 (lower is better)
Translates to: GRTWGLKCAPRT*AGTLLGCPGHH
Trigger: GTGGTGGCCAGGGCATCCCAGGAGTGTGCCCGCCCAGGTCCTGGGCGCACACTTTAATCCCCAGGTTCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS CCA 72 bp CCCCAGCCTGCTCACATCTTGCCCACTGAGCTTTGGTaGGGCCACTGCTCCCGGCCCTGGAAGTTGACCCCC +
Preference number: 6 (lower is better)
Translates to: PQPAHILPTELW*GHCSRPWKLTP
Trigger: GGGGGTCAACTTCCAGGGCCGGGAGCAGTGGCCCCACCAAAGCTCAGTGGGCAAGATGTGAGCAGGCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS GCA 72 bp GGCGTGGCCCGCAGCCCTACTGCTGGGCCTGCCTCTTaGAGTAGTTGCTGTAGGCCTCCTCGAACATGGCCT +
Preference number: 6 (lower is better)
Translates to: GVARSPTAGPAS*SSCCRPPRTWP
Trigger: AGGCCATGTTCGAGGAGGCCTACAGCAACTACTGCAAGAGGCAGGCCCAGCAGTAGGGCTGCGGGCCACGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000479852.1
ENST00000485462.5
CDS GCA 72 bp GGAGGACCCCCTCTGGTCCCCAGAACCCAACACAGATaGCTGCCACCCACTCCTGCCCTTGACCCAACCACC +
Preference number: 6 (lower is better)
Translates to: GGPPLVPRTQHR*LPPTPALDPTT
Trigger: GGTGGTTGGGTCAAGGGCAGGAGTGGGTGGCAGGCATCTGTGTTGGGTTCTGGGGACCAGAGGGGGTCCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS CCA 72 bp GGCCGCCCTTCATTCGGGCCAAGTGCACCTGCCCAATaGATGCGGCGGCGAAGGGCCGCTCCTCGAAGTATT +
Preference number: 6 (lower is better)
Translates to: GRPSFGPSAPAQ*MRRRRAAPRSI
Trigger: AATACTTCGAGGAGCGGCCCTTCGCCGCCGCATCCATTGGGCAGGTGCACTTGGCCCGAATGAAGGGCGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS CCA 72 bp AGGCACTGCGCATCAGGCCGCCTACCTGGATCTTCATaGCCACCTCGCGGCCGCCCTTCATTCGGGCCAAGT +
Preference number: 6 (lower is better)
Translates to: RHCASGRLPGSS*PPRGRPSFGPS
Trigger: ACTTGGCCCGAATGAAGGGCGGCCGCGAGGTGGCCATGAAGATCCAGGTAGGCGGCCTGATGCGCAGTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS CCA 72 bp CCTCGTTGTCCACCTACTCCTGCCTCACCTCACCCCTaGGAACAGCTCACGGCCACCCTCCCACCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: PRCPPTPASPHP*EQLTATLPPAL
Trigger: CAGAGCTGGTGGGAGGGTGGCCGTGAGCTGTTCCCAGGGGTGAGGTGAGGCAGGAGTAGGTGGACAACGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS CAA 72 bp TCCCGGGCATGCTCGCTGAGCGTCTGTTTGTGCTGCTaGTTCTCGGGGCGAGCCTTAGCCTGCCGGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SRACSLSVCLCC*FSGRALACRAF
Trigger: GAAGGCCCGGCAGGCTAAGGCTCGCCCCGAGAACAAGCAGCACAAACAGACGCTCAGCGAGCATGCCCGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS CAA 90 bp GCCGCACCACGCACCTTGCAGAGCGTGCGCACGATCCGCTCTGCATaGGCCTCGGACAGGAAAGGACTGGAACCCAGCACGGCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: AAPRTLQSVRTIRSA*ASDRKGLEPSTAFF
Trigger: GAAGAAGGCCGTGCTGGGTTCCAGTCCTTTCCTGTCCGAGGCCAATGCAGAGCGGATCGTGCGCACGCTCTGCAAGGTGCGTGGTGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS GCA 72 bp CTGGACCCCATCACAGCCTCGTTGTCCACCTACTCCTaGCTCACCTCACCCCTGGGAACAGCTCACGGCCAC +
Preference number: 6 (lower is better)
Translates to: LDPITASLSTYS*LTSPLGTAHGH
Trigger: GTGGCCGTGAGCTGTTCCCAGGGGTGAGGTGAGGCAGGAGTAGGTGGACAACGAGGCTGTGATGGGGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS CCA 72 bp GCACCTTGCAGAGCGTGCGCACGATCCGCTCTGCATTaGCCTCGGACAGGAAAGGACTGGAACCCAGCACGG +
Preference number: 6 (lower is better)
Translates to: APCRACARSALH*PRTGKDWNPAR
Trigger: CCGTGCTGGGTTCCAGTCCTTTCCTGTCCGAGGCCAATGCAGAGCGGATCGTGCGCACGCTCTGCAAGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS CCA 72 bp TCTCCCCAGCCTGCTCACATCTTGCCCACTGAGCTTTaGTGGGGCCACTGCTCCCGGCCCTGGAAGTTGACC +
Preference number: 6 (lower is better)
Translates to: SPQPAHILPTEL*WGHCSRPWKLT
Trigger: GGTCAACTTCCAGGGCCGGGAGCAGTGGCCCCACCAAAGCTCAGTGGGCAAGATGTGAGCAGGCTGGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS CAA 72 bp CGCACCTTGCAGAGCGTGCGCACGATCCGCTCTGCATaGGCCTCGGACAGGAAAGGACTGGAACCCAGCACG +
Preference number: 6 (lower is better)
Translates to: RTLQSVRTIRSA*ASDRKGLEPST
Trigger: CGTGCTGGGTTCCAGTCCTTTCCTGTCCGAGGCCAATGCAGAGCGGATCGTGCGCACGCTCTGCAAGGTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS CAA 72 bp GCGGCGGCGAAGGGCCGCTCCTCGAAGTATTCCAACTaGTCCCGCCAGTTGGGGCCCAGGTCGTTGTTGAGA +
Preference number: 6 (lower is better)
Translates to: AAAKGRSSKYSN*SRQLGPRSLLR
Trigger: TCTCAACAACGACCTGGGCCCCAACTGGCGGGACAAGTTGGAATACTTCGAGGAGCGGCCCTTCGCCGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS CAA 90 bp AAGACCCAGCCATGCTGCCGTGACCTGGACCCCATCACAGCCTCGTaGTCCACCTACTCCTGCCTCACCTCACCCCTGGGAACAGCTCAC +
Preference number: 6 (lower is better)
Translates to: KTQPCCRDLDPITAS*STYSCLTSPLGTAH
Trigger: GTGAGCTGTTCCCAGGGGTGAGGTGAGGCAGGAGTAGGTGGACAACGAGGCTGTGATGGGGTCCAGGTCACGGCAGCATGGCTGGGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS GCA 72 bp GAGGCTGAAGAGAAGTCTGTGGAGGCTCCGGCTGCATaGGGGACTGAGAAGTGGAACTCCCCTTCTGGGCCG +
Preference number: 6 (lower is better)
Translates to: EAEEKSVEAPAA*GTEKWNSPSGP
Trigger: CGGCCCAGAAGGGGAGTTCCACTTCTCAGTCCCGCATGCAGCCGGAGCCTCCACAGACTTCTCTTCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS GCA 72 bp TGTTTGTGCTGCTTGTTCTCGGGGCGAGCCTTAGCCTaGCGGGCCTTCTCAATGTCCTCGGCTGTGAGGCCC +
Preference number: 6 (lower is better)
Translates to: CLCCLFSGRALA*RAFSMSSAVRP
Trigger: GGGCCTCACAGCCGAGGACATTGAGAAGGCCCGGCAGGCTAAGGCTCGCCCCGAGAACAAGCAGCACAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS GCA 72 bp ACCACGCACCTTGCAGAGCGTGCGCACGATCCGCTCTaGATTGGCCTCGGACAGGAAAGGACTGGAACCCAG +
Preference number: 6 (lower is better)
Translates to: TTHLAERAHDPL*IGLGQERTGTQ
Trigger: CTGGGTTCCAGTCCTTTCCTGTCCGAGGCCAATGCAGAGCGGATCGTGCGCACGCTCTGCAAGGTGCGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS GCA 72 bp GCCCTTCATTCGGGCCAAGTGCACCTGCCCAATGGATaGGGCGGCGAAGGGCCGCTCCTCGAAGTATTCCAA +
Preference number: 6 (lower is better)
Translates to: ALHSGQVHLPNG*GGEGPLLEVFQ
Trigger: TTGGAATACTTCGAGGAGCGGCCCTTCGCCGCCGCATCCATTGGGCAGGTGCACTTGGCCCGAATGAAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS GCA 72 bp CGCAGCCCTACTGCTGGGCCTGCCTCTTGCAGTAGTTaGTGTAGGCCTCCTCGAACATGGCCTTGCAGGGGA +
Preference number: 6 (lower is better)
Translates to: RSPTAGPASCSS*CRPPRTWPCRG
Trigger: TCCCCTGCAAGGCCATGTTCGAGGAGGCCTACAGCAACTACTGCAAGAGGCAGGCCCAGCAGTAGGGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000479852.1
ENST00000485462.5
CDS GCA 72 bp CCCACACCCTGGAGAACCAGAGCTAAGACCCAGCCATaGTGCCGTGACCTGGACCCCATCACAGCCTCGTTG +
Preference number: 6 (lower is better)
Translates to: PTPWRTRAKTQP*CRDLDPITASL
Trigger: CAACGAGGCTGTGATGGGGTCCAGGTCACGGCAGCATGGCTGGGTCTTAGCTCTGGTTCTCCAGGGTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS CCA 72 bp CTGACTGGTCGGGAGCGGAGGCTGAAGAGAAGTCTGTaGAGGCTCCGGCTGCATGCGGGACTGAGAAGTGGA +
Preference number: 6 (lower is better)
Translates to: LTGRERRLKRSL*RLRLHAGLRSG
Trigger: TCCACTTCTCAGTCCCGCATGCAGCCGGAGCCTCCACAGACTTCTCTTCAGCCTCCGCTCCCGACCAGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS CCA 72 bp ATCTCGTTCCGAATCTCCTGGCTGAGCCCTTCGGCCTaGTCCAGGGGGAAGCCAGACACCAGCTCTGTGGTC +
Preference number: 6 (lower is better)
Translates to: ISFRISWLSPSA*SRGKPDTSSVV
Trigger: GACCACAGAGCTGGTGTCTGGCTTCCCCCTGGACCAGGCCGAAGGGCTCAGCCAGGAGATTCGGAACGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000479852.1
ENST00000485462.5
CDS CCA 72 bp CCCCATCTTCCTGTGCAGGGAGTAGGTTTCCTCGGGTaGGGGGACGAGACGGTGCCTCAGCATGACGGGAAT +
Preference number: 6 (lower is better)
Translates to: PHLPVQGVGFLG*GDETVPQHDGN
Trigger: ATTCCCGTCATGCTGAGGCACCGTCTCGTCCCCCCACCCGAGGAAACCTACTCCCTGCACAGGAAGATGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000479852.1
ENST00000485462.5
CDS CCA 72 bp ATGATCAGCTCCCCTCCGATGCCCAAGTGCTGCAGGTaGGTTTCCACGGCCGCCTGGGTCAGCTTGACAAGG +
Preference number: 6 (lower is better)
Translates to: MISSPPMPKCCR*VSTAAWVSLTR
Trigger: CCTTGTCAAGCTGACCCAGGCGGCCGTGGAAACCCACCTGCAGCACTTGGGCATCGGAGGGGAGCTGATCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000489044.1
CDS TCA 72 bp AGAGAAGTCTGTGGAGGCTCCGGCTGCATGCGGGACTaGGAAGTGGAACTCCCCTTCTGGGCCGCCGAAGTT +
Preference number: 6 (lower is better)
Translates to: REVCGGSGCMRD*EVELPFWAAEV
Trigger: AACTTCGGCGGCCCAGAAGGGGAGTTCCACTTCTCAGTCCCGCATGCAGCCGGAGCCTCCACAGACTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS GCA 72 bp ACGAGAGGGGCAGGTGGATCCACAGGTTACCGGAGATaGCACAGCTGTAGGGTGGGCCACATTGAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: TRGAGGSTGYRR*HSCRVGHIELL
Trigger: GAGGAGCTCAATGTGGCCCACCCTACAGCTGTGGCATCTCCGGTAACCTGTGGATCCACCTGCCCCTCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476488.1
CDS CCA 72 bp GCCTCTTGCAGTAGTTGCTGTAGGCCTCCTCGAACATaGCCTTGCAGGGGAAGCGGGCCTTCAGCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: ASCSSCCRPPRT*PCRGSGPSAWS
Trigger: GCTCCAAGCTGAAGGCCCGCTTCCCCTGCAAGGCCATGTTCGAGGAGGCCTACAGCAACTACTGCAAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000479852.1
ENST00000485462.5
CDS CCA 72 bp TCATCTGGAAGGCAGGAGAATGACACAGGGCGAACCTaGGGATTAAAGTGTGCGCCCAGGACCTGGGCGGGC +
Preference number: 6 (lower is better)
Translates to: SSGRQENDTGRT*GLKCAPRTWAG
Trigger: GCCCGCCCAGGTCCTGGGCGCACACTTTAATCCCCAGGTTCGCCCTGTGTCATTCTCCTGCCTTCCAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS CAA 72 bp GCTGAAAGCCCATGGCAGAGAATGAGTCTCTGGGGTTaGCAAAGAGCCTCCCGTTGGCCCTGCCCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: AESPWQRMSLWG*QRASRWPCPEG
Trigger: CCCCTCTGGGCAGGGCCAACGGGAGGCTCTTTGCAAACCCCAGAGACTCATTCTCTGCCATGGGCTTTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS CAA 72 bp TGCTGCAGGTGGGTTTCCACGGCCGCCTGGGTCAGCTaGACAAGGCCTTTAGCCACCATGATGGTGTCTCCC +
Preference number: 6 (lower is better)
Translates to: CCRWVSTAAWVS*TRPLATMMVSP
Trigger: GGGAGACACCATCATGGTGGCTAAAGGCCTTGTCAAGCTGACCCAGGCGGCCGTGGAAACCCACCTGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000489044.1
CDS CAA 90 bp AGAACCTTCGCTGAAAGCCCATGGCAGAGAATGAGTCTCTGGGGTTaGCAAAGAGCCTCCCGTTGGCCCTGCCCAGAGGGGAGGAGGCCT +
Preference number: 6 (lower is better)
Translates to: RTFAESPWQRMSLWG*QRASRWPCPEGRRP
Trigger: AGGCCTCCTCCCCTCTGGGCAGGGCCAACGGGAGGCTCTTTGCAAACCCCAGAGACTCATTCTCTGCCATGGGCTTTCAGCGAAGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS CAA 90 bp CCGGGCCTTCTCAATGTCCTCGGCTGTGAGGCCCCCAACAGGGGATaGGTCCTGGTGGAAGAACCTTCGCTGAAAGCCCATGGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: PGLLNVLGCEAPNRG*VLVEEPSLKAHGRE
Trigger: TTCTCTGCCATGGGCTTTCAGCGAAGGTTCTTCCACCAGGACCAATCCCCTGTTGGGGGCCTCACAGCCGAGGACATTGAGAAGGCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS GCA 72 bp ACAGCTGTAGGGTGGGCCACATTGAGCTCCTCCTTCTaGAGGCAGAGGTGTGTCCCCCTCATCACCCTCCAT +
Preference number: 6 (lower is better)
Translates to: TAVGWATLSSSF*RQRCVPLITLH
Trigger: ATGGAGGGTGATGAGGGGGACACACCTCTGCCTGCAGAAGGAGGAGCTCAATGTGGCCCACCCTACAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476488.1
CDS CCA 72 bp GCGCTCTGCCGCACCCGCTCGAAGATCTTAGCCAGGTaGGGGTTGATAAAGGCATCATCCTGGATGCTCAGC +
Preference number: 6 (lower is better)
Translates to: ALCRTRSKILAR*GLIKASSWMLS
Trigger: GCTGAGCATCCAGGATGATGCCTTTATCAACCCCCACCTGGCTAAGATCTTCGAGCGGGTGCGGCAGAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000485462.5
CDS CCA 72 bp ATGCCCAAGTGCTGCAGGTGGGTTTCCACGGCCGCCTaGGTCAGCTTGACAAGGCCTTTAGCCACCATGATG +
Preference number: 6 (lower is better)
Translates to: MPKCCRWVSTAA*VSLTRPLATMM
Trigger: CATCATGGTGGCTAAAGGCCTTGTCAAGCTGACCCAGGCGGCCGTGGAAACCCACCTGCAGCACTTGGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000489044.1
CDS CCA 72 bp GATCCACAGGTTACCGGAGATGCCACAGCTGTAGGGTaGGCCACATTGAGCTCCTCCTTCTGCAGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: DPQVTGDATAVG*ATLSSSFCRQR
Trigger: CCTCTGCCTGCAGAAGGAGGAGCTCAATGTGGCCCACCCTACAGCTGTGGCATCTCCGGTAACCTGTGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476488.1
CDS CCA 72 bp GAACCAGAGCTAAGACCCAGCCATGCTGCCGTGACCTaGACCCCATCACAGCCTCGTTGTCCACCTACTCCT +
Preference number: 6 (lower is better)
Translates to: EPELRPSHAAVT*TPSQPRCPPTP
Trigger: AGGAGTAGGTGGACAACGAGGCTGTGATGGGGTCCAGGTCACGGCAGCATGGCTGGGTCTTAGCTCTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS CAA 90 bp CCAATGGATGCGGCGGCGAAGGGCCGCTCCTCGAAGTATTCCAACTaGTCCCGCCAGTTGGGGCCCAGGTCGTTGTTGAGAGTTTTCATC +
Preference number: 6 (lower is better)
Translates to: PMDAAAKGRSSKYSN*SRQLGPRSLLRVFI
Trigger: GATGAAAACTCTCAACAACGACCTGGGCCCCAACTGGCGGGACAAGTTGGAATACTTCGAGGAGCGGCCCTTCGCCGCCGCATCCATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS CAA 90 bp TCCGCGCTCTGCCGCACCCGCTCGAAGATCTTAGCCAGGTGGGGGTaGATAAAGGCATCATCTGGAAGGCAGGAGAATGACACAGGGCGA +
Preference number: 6 (lower is better)
Translates to: SALCRTRSKILARWG*IKASSGRQENDTGR
Trigger: TCGCCCTGTGTCATTCTCCTGCCTTCCAGATGATGCCTTTATCAACCCCCACCTGGCTAAGATCTTCGAGCGGGTGCGGCAGAGCGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS CAA 90 bp ATGCCCAAGTGCTGCAGGTGGGTTTCCACGGCCGCCTGGGTCAGCTaGACAAGGCCTTTAGCCACCATGATGGTGTCTCCCAATATGGCA +
Preference number: 6 (lower is better)
Translates to: MPKCCRWVSTAAWVS*TRPLATMMVSPNMA
Trigger: TGCCATATTGGGAGACACCATCATGGTGGCTAAAGGCCTTGTCAAGCTGACCCAGGCGGCCGTGGAAACCCACCTGCAGCACTTGGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366777.4
ENST00000489044.1
CDS GCA 72 bp CATGTTTATCCTGACCCTGCACCTTCCCCAAGAACATaGCAATCTGCTCCACAGCCGTGGACTGCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: HVYPDPAPSPRT*QSAPQPWTAGP
Trigger: GGGCCCTGCAGTCCACGGCTGTGGAGCAGATTGGCATGTTCTTGGGGAAGGTGCAGGGTCAGGATAAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS CCA 72 bp ACCTTCGCTGAAAGCCCATGGCAGAGAATGAGTCTCTaGGGTTTGCAAAGAGCCTCCCGTTGGCCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: TFAESPWQRMSL*GLQRASRWPCP
Trigger: TGGGCAGGGCCAACGGGAGGCTCTTTGCAAACCCCAGAGACTCATTCTCTGCCATGGGCTTTCAGCGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS CCA 72 bp GGGTTGATAAAGGCATCATCCTGGATGCTCAGCATCTaGCCCAGCTTGAGTGCCGCACCACGCACCTTGCAG +
Preference number: 6 (lower is better)
Translates to: GLIKASSWMLSI*PSLSAAPRTLQ
Trigger: CTGCAAGGTGCGTGGTGCGGCACTCAAGCTGGGCCAGATGCTGAGCATCCAGGATGATGCCTTTATCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000485462.5
CDS CCA 72 bp CAAATACTTCCCAAGCTTCTGGTGCCGTCCAGGCACTaGGGCCAGAAGACACCACATATGGCCCTGCCAGGA +
Preference number: 6 (lower is better)
Translates to: QILPKLLVPSRH*GQKTPHMALPG
Trigger: TCCTGGCAGGGCCATATGTGGTGTCTTCTGGCCCCAGTGCCTGGACGGCACCAGAAGCTTGGGAAGTATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS CCA 72 bp ACGGCCATGAGGTTGTTGACATCACTGTTGATGCTCTaGGCCACGCCAGGGTACTGTGGGGGTATGGGTGAG +
Preference number: 6 (lower is better)
Translates to: TAMRLLTSLLML*ATPGYCGGMGE
Trigger: CTCACCCATACCCCCACAGTACCCTGGCGTGGCCCAGAGCATCAACAGTGATGTCAACAACCTCATGGCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS CAA 72 bp CTCAATGTCCTCGGCTGTGAGGCCCCCAACAGGGGATaGGTCCTGGTGGAAGAACCTTCGCTGAAAGCCCAT +
Preference number: 6 (lower is better)
Translates to: LNVLGCEAPNRG*VLVEEPSLKAH
Trigger: ATGGGCTTTCAGCGAAGGTTCTTCCACCAGGACCAATCCCCTGTTGGGGGCCTCACAGCCGAGGACATTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS CCA 72 bp GGGGAAGCCAGACACCAGCTCTGTGGTCAGCACATGTaGGCTGCAGAGCTCATCCACAATCTCAGGCACATA +
Preference number: 6 (lower is better)
Translates to: GEARHQLCGQHM*AAELIHNLRHI
Trigger: TATGTGCCTGAGATTGTGGATGAGCTCTGCAGCCCACATGTGCTGACCACAGAGCTGGTGTCTGGCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000479852.1
ENST00000485462.5
CDS CAA 72 bp TGCCGCACCCGCTCGAAGATCTTAGCCAGGTGGGGGTaGATAAAGGCATCATCCTGGATGCTCAGCATCTGG +
Preference number: 6 (lower is better)
Translates to: CRTRSKILARWG*IKASSWMLSIW
Trigger: CCAGATGCTGAGCATCCAGGATGATGCCTTTATCAACCCCCACCTGGCTAAGATCTTCGAGCGGGTGCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000485462.5
CDS TCA 72 bp GTGGAAGAACCTTCGCTGAAAGCCCATGGCAGAGAATaGGTCTCTGGGGTTTGCAAAGAGCCTCCCGTTGGC +
Preference number: 6 (lower is better)
Translates to: VEEPSLKAHGRE*VSGVCKEPPVG
Trigger: GCCAACGGGAGGCTCTTTGCAAACCCCAGAGACTCATTCTCTGCCATGGGCTTTCAGCGAAGGTTCTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS CAA 72 bp GGCCGCTCCTCGAAGTATTCCAACTTGTCCCGCCAGTaGGGGCCCAGGTCGTTGTTGAGAGTTTTCATCATC +
Preference number: 6 (lower is better)
Translates to: GRSSKYSNLSRQ*GPRSLLRVFII
Trigger: GATGATGAAAACTCTCAACAACGACCTGGGCCCCAACTGGCGGGACAAGTTGGAATACTTCGAGGAGCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000485462.5
CDS CAA 72 bp TGCCGCACCCGCTCGAAGATCTTAGCCAGGTGGGGGTaGATAAAGGCATCATCTGGAAGGCAGGAGAATGAC +
Preference number: 6 (lower is better)
Translates to: CRTRSKILARWG*IKASSGRQEND
Trigger: GTCATTCTCCTGCCTTCCAGATGATGCCTTTATCAACCCCCACCTGGCTAAGATCTTCGAGCGGGTGCGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS TCA 72 bp CCAACAGGGGATTGGTCCTGGTGGAAGAACCTTCGCTaGAAGCCCATGGCAGAGAATGAGTCTCTGGGGTTT +
Preference number: 6 (lower is better)
Translates to: PTGDWSWWKNLR*KPMAENESLGF
Trigger: AAACCCCAGAGACTCATTCTCTGCCATGGGCTTTCAGCGAAGGTTCTTCCACCAGGACCAATCCCCTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS GCA 72 bp AGCCAGACACCAGCTCTGTGGTCAGCACATGTGGGCTaGAGAGCTCATCCACAATCTCAGGCACATAGAAGA +
Preference number: 6 (lower is better)
Translates to: SQTPALWSAHVG*RAHPQSQAHRR
Trigger: TCTTCTATGTGCCTGAGATTGTGGATGAGCTCTGCAGCCCACATGTGCTGACCACAGAGCTGGTGTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000479852.1
ENST00000485462.5
CDS GCA 72 bp GTAGAGGTCGGTGAAGGATCTGTCATATTCCCGCGTTaGCCCAAAATCCAAAAGAGCCACCTTGTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: VEVGEGSVIFPR*PKIQKSHLVLL
Trigger: CAGCAGCACAAGGTGGCTCTTTTGGATTTTGGGGCAACGCGGGAATATGACAGATCCTTCACCGACCTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000479852.1
ENST00000485462.5
CDS CCA 72 bp ATTGGTCCTGGTGGAAGAACCTTCGCTGAAAGCCCATaGCAGAGAATGAGTCTCTGGGGTTTGCAAAGAGCC +
Preference number: 6 (lower is better)
Translates to: IGPGGRTFAESP*QRMSLWGLQRA
Trigger: GGCTCTTTGCAAACCCCAGAGACTCATTCTCTGCCATGGGCTTTCAGCGAAGGTTCTTCCACCAGGACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000489044.1
CDS CAA 72 bp ATCAGGTGCTCGGGGAACAGGCCTTCTGGAAGCATGTaGCTCATGTTCAACACGGCCATGAGGTTGTTGACA +
Preference number: 6 (lower is better)
Translates to: IRCSGNRPSGSM*LMFNTAMRLLT
Trigger: TGTCAACAACCTCATGGCCGTGTTGAACATGAGCAACATGCTTCCAGAAGGCCTGTTCCCCGAGCACCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000479852.1
ENST00000485462.5
CDS CAA 90 bp CTGCCCTTGACCCAACCACCTAGCCTCAGACCTTCTGGAAGCATGTaGCTCATGTTCAACACGGCCATGAGGTTGTTGACATCACTGTTG +
Preference number: 6 (lower is better)
Translates to: LPLTQPPSLRPSGSM*LMFNTAMRLLTSLL
Trigger: CAACAGTGATGTCAACAACCTCATGGCCGTGTTGAACATGAGCAACATGCTTCCAGAAGGTCTGAGGCTAGGTGGTTGGGTCAAGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478406.5
CDS GCA 72 bp GAATCAGGTTGTGGATCTTCTCGGTGGTGCTCTGAGTaGCAAAATCAAAAGGCTCATCAGAGGCGAAGGCCT +
Preference number: 6 (lower is better)
Translates to: ESGCGSSRWCSE*QNQKAHQRRRP
Trigger: AGGCCTTCGCCTCTGATGAGCCTTTTGATTTTGGCACTCAGAGCACCACCGAGAAGATCCACAACCTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366777.4
ENST00000366778.5
ENST00000478406.5
ENST00000479852.1
ENST00000485462.5
CDS CAA 72 bp ACCCAACCACCTAGCCTCAGACCTTCTGGAAGCATGTaGCTCATGTTCAACACGGCCATGAGGTTGTTGACA +
Preference number: 6 (lower is better)
Translates to: TQPPSLRPSGSM*LMFNTAMRLLT
Trigger: TGTCAACAACCTCATGGCCGTGTTGAACATGAGCAACATGCTTCCAGAAGGTCTGAGGCTAGGTGGTTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478406.5