Pregenerated sensors for COQ7-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000261465Ensembl transcript IDs: ENST00000567047.1, ENST00000568971.5, ENST00000571934.5, ENST00000576433.6, ENST00000666887.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCCAGCCGGTGCGCGGGCGAGCTGAGCCTTCCTTACGTCTGCTGTaGGTCATCAGTCCGAGCCAAGGGCACTATTGGCCAGTTCCGTTC | + |
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Preference number: 5 (lower is better) Translates to: LQPVRGRAEPSLRLL*VISPSQGHYWPVPF Trigger: GAACGGAACTGGCCAATAGTGCCCTTGGCTCGGACTGATGACGCACAGCAGACGTAAGGAAGGCTCAGCTCGCCCGCGCACCGGCTGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571934.5 |
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| CDS GCA 90 bp | TTGCACTCCAGCCGGTGCGCGGGCGAGCTGAGCCTTCCTTACGTCTaGTGTGCGTCATCAGTCCGAGCCAAGGGCACTATTGGCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LHSSRCAGELSLPYV*CASSVRAKGTIGQF Trigger: GAACTGGCCAATAGTGCCCTTGGCTCGGACTGATGACGCACAGCAGACGTAAGGAAGGCTCAGCTCGCCCGCGCACCGGCTGGAGTGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571934.5 |
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| CDS GCA 90 bp | CTTTTTCCGGTGCGCGGGCGAGCTGAGCCTTCCTTACGTCTGCTGTaGGTCATCAGTCCGAGCCAAGGGCACTATTGGCCAGTTCCGTTC | + |
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Preference number: 5 (lower is better) Translates to: LFPVRGRAEPSLRLL*VISPSQGHYWPVPF Trigger: GAACGGAACTGGCCAATAGTGCCCTTGGCTCGGACTGATGACGCACAGCAGACGTAAGGAAGGCTCAGCTCGCCCGCGCACCGGAAAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568971.5 |
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| CDS GCA 90 bp | CTTTGCTTTTTCCGGTGCGCGGGCGAGCTGAGCCTTCCTTACGTCTaGTGTGCGTCATCAGTCCGAGCCAAGGGCACTATTGGCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LCFFRCAGELSLPYV*CASSVRAKGTIGQF Trigger: GAACTGGCCAATAGTGCCCTTGGCTCGGACTGATGACGCACAGCAGACGTAAGGAAGGCTCAGCTCGCCCGCGCACCGGAAAAAGCAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568971.5 |
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| CDS TCA 72 bp | TCACACCATTGCACTCCAGCCGGTGCGCGGGCGAGCTaGGCCTTCCTTACGTCTGCTGTGCGTCATCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SHHCTPAGARAS*AFLTSAVRHQS Trigger: GGACTGATGACGCACAGCAGACGTAAGGAAGGCTCAGCTCGCCCGCGCACCGGCTGGAGTGCAATGGTGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571934.5 |
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| CDS GCA 72 bp | GTGCGCGGGCGAGCTGAGCCTTCCTTACGTCTGCTGTaGGTCATCAGTCCGAGCCAAGGGCACTATTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: VRGRAEPSLRLL*VISPSQGHYWP Trigger: TGGCCAATAGTGCCCTTGGCTCGGACTGATGACGCACAGCAGACGTAAGGAAGGCTCAGCTCGCCCGCGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000568971.5 ENST00000571934.5 |
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| CDS GCA 72 bp | AGCCGGTGCGCGGGCGAGCTGAGCCTTCCTTACGTCTaGTGTGCGTCATCAGTCCGAGCCAAGGGCACTATT | + |
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Preference number: 6 (lower is better) Translates to: SRCAGELSLPYV*CASSVRAKGTI Trigger: AATAGTGCCCTTGGCTCGGACTGATGACGCACAGCAGACGTAAGGAAGGCTCAGCTCGCCCGCGCACCGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571934.5 |
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| CDS GCA 72 bp | TTCCGGTGCGCGGGCGAGCTGAGCCTTCCTTACGTCTaGTGTGCGTCATCAGTCCGAGCCAAGGGCACTATT | + |
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Preference number: 6 (lower is better) Translates to: FRCAGELSLPYV*CASSVRAKGTI Trigger: AATAGTGCCCTTGGCTCGGACTGATGACGCACAGCAGACGTAAGGAAGGCTCAGCTCGCCCGCGCACCGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568971.5 |
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| CDS TCA 72 bp | AAGTTCCTCTTTGCTTTTTCCGGTGCGCGGGCGAGCTaGGCCTTCCTTACGTCTGCTGTGCGTCATCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: KFLFAFSGARAS*AFLTSAVRHQS Trigger: GGACTGATGACGCACAGCAGACGTAAGGAAGGCTCAGCTCGCCCGCGCACCGGAAAAAGCAAAGAGGAACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568971.5 |
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| CDS CCA 72 bp | GAGCCACGAGTTTATGTGCACAAGTGTTTTGGGTTGTaGACTGAAGCTCAGCCTGTTAATCAGACCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: EPRVYVHKCFGL*TEAQPVNQTSP Trigger: TGGGCTGGTCTGATTAACAGGCTGAGCTTCAGTCCACAACCCAAAACACTTGTGCACATAAACTCGTGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666887.1 |
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| CDS CAA 72 bp | TTTGAGCCACGAGTTTATGTGCACAAGTGTTTTGGGTaGTGGACTGAAGCTCAGCCTGTTAATCAGACCAGC | + |
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Preference number: 6 (lower is better) Translates to: FEPRVYVHKCFG*WTEAQPVNQTS Trigger: GCTGGTCTGATTAACAGGCTGAGCTTCAGTCCACAACCCAAAACACTTGTGCACATAAACTCGTGGCTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666887.1 |
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| CDS TCA 72 bp | TGGACTGAAGCTCAGCCTGTTAATCAGACCAGCCCATaGGTGTATAACAAACAGAATTGGAGGCTGGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: WTEAQPVNQTSP*VYNKQNWRLVS Trigger: AGAAACCAGCCTCCAATTCTGTTTGTTATACACTCATGGGCTGGTCTGATTAACAGGCTGAGCTTCAGTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666887.1 |
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| CDS TCA 72 bp | GTGCAGCTCTCTCTAACAAATGTGCCTTACAACTCCTaGTTAAACGGCGTCTTGAAGGTTTTAAAATGTGAT | + |
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Preference number: 6 (lower is better) Translates to: VQLSLTNVPYNS*LNGVLKVLKCD Trigger: ATCACATTTTAAAACCTTCAAGACGCCGTTTAATCAGGAGTTGTAAGGCACATTTGTTAGAGAGAGCTGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000567047.1 ENST00000568971.5 ENST00000576433.6 ENST00000666887.1 |
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