RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COQ5 (Homo sapiens)

Ensembl gene IDs: ENSG00000110871

Ensembl transcript IDs: ENST00000288532.11, ENST00000445328.6, ENST00000546838.1, ENST00000547448.1, ENST00000547736.1, ENST00000547943.5, ENST00000551769.1, ENST00000552443.5

Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATaGTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTTCCAGG +
Preference number: 1 (lower is better)
Translates to: VRFKHESKARILKRR*SAAVSFARLSFSSR
Trigger: CCTGGAACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
3UTR-3UTR GCA 90 bp TGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTTCCAGGCTTTCAACAGATATGACTGGTTCATaGTCCATGATAGGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: CSAAVSFARLSFSSRLSTDMTGS*SMIGKE
Trigger: TTCCTTTCCTATCATGGAGCATGAACCAGTCATATC...TGTTGAAAGCCTGGAACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
3UTR-3UTR CCA 90 bp TTGTTCTTCCACTTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCTCAACAGGATATGACTaGTTCATGCTCCATGATAGG +
Preference number: 2 (lower is better)
Translates to: LFFHFETVRFKHESKARISTGYD*FMLHDR
Trigger: CCTATCATGGAGCATGAACCAGTCATATCCTGTTGA...GATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAAGTGGAAGAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
3UTR GCA 72 bp AAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATaGTCTGCTGCTGTCTCATTTGCCAGATTATCCTTC +
Preference number: 3 (lower is better)
Translates to: KHESKARILKRR*SAAVSFARLSF
Trigger: GAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR TCA 90 bp ACACTCACTTCAAAACTGAGCTTTAGGGGTGGTTGTACCTTAACCACACACCCTTCCAGTCTCCAGCGATaGCCTCTCCCAGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: TLTSKLSFRGGCTLTTHPSSLQR*PLPGQG
Trigger: TCCCTGTCCTGGGAGAGGTCATCGCTGGAGACTGGA...AGGGTGTGTGGTTAAGGTACAACCACCCCTAAAGCTCAGTTTTGAAGTGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR TCA 90 bp GAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATGCTCCAGTCTCCAGCGATaGCCTCTCCCAGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: ETVRFKHESKARILKRRCSSLQR*PLPGQG
Trigger: TCCCTGTCCTGGGAGAGGTCATCGCTGGAGACTGGA...GCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR CCA 90 bp TCCTTCAGTTCCAGGCTTTCAACAGGATATGACTGGTTCATGCTCCATGATAGGGCAACATCAAGCAGCTaGGTCCCAGGAAGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: SFSSRLSTGYDWFMLHDRATSSS*VPGSGC
Trigger: GCACCCGCTTCCTGGGACCCAGCTGCTTGATGTTGC...CCTATCATGGAGCATGAACCAGTCATATCCTGTTGAAAGCCTGGAACTGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR GCA 90 bp AACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATGCTCTGCTGCTGTCTCATGTCTCAAACCCAAAGTaGGTTTCCGCTGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: NMSPRHVSLRGDALLLSHVSNPK*VSAARF
Trigger: GAAGCGGGCAGCGGAAACGCACTTTGGGTTTGAGAC...ATGAGACAGCAGCAGAGCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR GCA 90 bp AACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATGCTCTGCTGCTGTCTCATCCCATGCAAGTCCTGTaGCTCCAGCAACATCAAGCA +
Preference number: 4 (lower is better)
Translates to: NMSPRHVSLRGDALLLSHPMQVL*LQQHQA
Trigger: TGCTTGATGTTGCTGGAGGCACAGGACTTGCATGGG...ATGAGACAGCAGCAGAGCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445328.6
CDS-3UTR CCA 90 bp ATCCTTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTGCTGCCCGCTTCTCTTaGGACAAGAGCCGAGCACTT +
Preference number: 4 (lower is better)
Translates to: ILKRRCSAAVSFARLSFSAARFS*DKSRAL
Trigger: AAGTGCTCGGCTCTTGTCCCAAGAGAAGCGGGCAGC...ACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR CCA 90 bp TCTTCCACTTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAGCTGCCCGCTTCTCTTaGGACAAGAGCCGAGCACTT +
Preference number: 4 (lower is better)
Translates to: SSTLRLFDSNMSPRHVSLAARFS*DKSRAL
Trigger: AAGTGCTCGGCTCTTGTCCCAAGAGAAGCGGGCAGC...TAAGGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAAGTGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR TCA 90 bp AACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATGCTCTGCTGCTGTCTCATTTAGCATCTCCTTGTTaGTGTCACACACCACGACAC +
Preference number: 4 (lower is better)
Translates to: NMSPRHVSLRGDALLLSHLASPC*CHTPRH
Trigger: GTGTCGTGGTGTGTGACATCAACAAGGAGATGCTAA...ATGAGACAGCAGCAGAGCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR TCA 90 bp CACGTATCCTTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTCCAGCTCTGTATCCTTaGGCCAAGGCTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: HVSLRGDALLLSHLPDYPPALYP*AKAFCF
Trigger: AAAGCAGAAAGCCTTGGCTCAAGGATACAGAGCTGG...AGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAAGGATACGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR TCA 90 bp GATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTTCCAGGCTTTCAACCTGATCAATGTGTGTaGCATTCCGGATCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: DALLLSHLPDYPSVPGFQPDQCV*HSGSQR
Trigger: CCTTTGGGATCCGGAATGTCACACACATTGATCAGG...TTGAAAGCCTGGAACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR TCA 90 bp TGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTTCCAGGCTTTCAACAGCTTCCTGGAGTGCCTaGTCAATGTGTGTGACATTC +
Preference number: 4 (lower is better)
Translates to: CSAAVSFARLSFSSRLSTASWSA*SMCVTF
Trigger: GAATGTCACACACATTGATCAGGCACTCCAGGAAGC...TGTTGAAAGCCTGGAACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR TCA 90 bp TTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATGCTCTGCTGCTCCCAGGACAGGGATaGCCTGGAAGCTATATAGAT +
Preference number: 4 (lower is better)
Translates to: FDSNMSPRHVSLRGDALLLPGQG*PGSYID
Trigger: ATCTATATAGCTTCCAGGTCATCCCTGTCCTGGGAG...CAGCAGAGCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR GCA 90 bp AGTTCCAGGCTTTCAACAGGATATGACTGGTTCATGCTCCATGATAGGAAAGGAAAAGTGCGTTTCCGCTaGCCGCTTCTCTTGGGACAA +
Preference number: 4 (lower is better)
Translates to: SSRLSTGYDWFMLHDRKGKVRFR*PLLLGQ
Trigger: TTGTCCCAAGAGAAGCGGGCAGCGGAAACGCACTTT...TCCTTTCCTATCATGGAGCATGAACCAGTCATATCCTGTTGAAAGCCTGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR GCA 90 bp TTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGAGTCTCAAACCCAAAGTaGGTTTCCGCTGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: FETVRFKHESKARILKRRVSNPK*VSAARF
Trigger: GAAGCGGGCAGCGGAAACGCACTTTGGGTTTGAGAC...TCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR GCA 90 bp TCAGTTCCAGGCTTTCAACAGGATATGACTGGTTCATGCTCCATGATAGGAAAGACACCTGATAGACTTTaGCCCCCTTCTCCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: SVPGFQQDMTGSCSMIGKTPDRL*PPSPLP
Trigger: CGGAAGAGGAGAAGGGGGGCAAAGTCTATCAGGTGT...CTTTCCTATCATGGAGCATGAACCAGTCATATCCTGTTGAAAGCCTGGAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR GCA 90 bp GCACGTATCCTTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCATGCAATGTCACCTGTaGCTCCAGCAACATCAAGCA +
Preference number: 4 (lower is better)
Translates to: ARILKRRCSAAVSFARLSMQCHL*LQQHQA
Trigger: TGCTTGATGTTGCTGGAGGCACAGGTGACATTGCAT...GGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAAGGATACGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR TCA 90 bp GCACGTATCCTTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCAGTTTGAAGCCAGAATaGATGGCCACAATGCCTGAT +
Preference number: 4 (lower is better)
Translates to: ARILKRRCSAAVSFARLSSLKPE*MATMPD
Trigger: ATCAGGCATTGTGGCCATTCATTCTGGCTTCAAACT...GGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAAGGATACGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR GCA 90 bp TTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATGCTCTGCTGATTAAGGAACCGGAATaGAATGTCACCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: FDSNMSPRHVSLRGDALLIKEPE*NVTCAS
Trigger: GGAGGCACAGGTGACATTGCATTCCGGTTCCTTAAT...CAGCAGAGCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR CCA 90 bp TTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTTCCAAATGCCTCTGGGAGATaGACTGAAGCAGCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LRGDALLLSHLPDYPSVPNASGR*TEAAPK
Trigger: CTTTGGAGCTGCTTCAGTCCATCTCCCAGAGGCATT...TGGAACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR TCA 90 bp AGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATGCTCATAAAGCCTGGATATaGGGGGATTGTTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: RLFDSNMSPRHVSLRGDAHKAWI*GDCSLG
Trigger: GCCAAGTGAACAATCCCCTCATATCCAGGCTTTATG...AGCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR TCA 90 bp TGTTCTTCCACTTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCCATAAAGCCTGGATATaGGGGGATTGTTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: CSSTLRLFDSNMSPRHVSHKAWI*GDCSLG
Trigger: GCCAAGTGAACAATCCCCTCATATCCAGGCTTTATG...GGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAAGTGGAAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR TCA 90 bp CACGTATCCTTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTCTTCTATCATGTCCTTaGACTCTTCCTGAGACGGAA +
Preference number: 4 (lower is better)
Translates to: HVSLRGDALLLSHLPDYPLLSCP*TLPETE
Trigger: TTCCGTCTCAGGAAGAGTTCAAGGACATGATAGAAG...AGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAAGGATACGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR TCA 90 bp TGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTTCCAGGCTTTCAACATGTTCGATTCAAACATaGGTCCAAGGCACGTATCCT +
Preference number: 4 (lower is better)
Translates to: CSAAVSFARLSFSSRLSTCSIQT*VQGTYP
Trigger: AGGATACGTGCCTTGGACTCATGTTTGAATCGAACA...TGTTGAAAGCCTGGAACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR TCA 90 bp ATTTGTTCTTCCACTTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTACTCTGGGAGATGGACTaGAGCAGCTCCAAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: ICSSTLRLFDSNMSPRHVLWEMD*SSSKES
Trigger: GCTTTCTTTGGAGCTGCTTCAGTCCATCTCCCAGAG...TACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAAGTGGAAGAACAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR TCA 90 bp TCAGTTCCAGGCTTTCAACAGGATATGACTGGTTCATGCTCCATGATAGGAAAGGACTTCGTCCTAGGCTaGAAGGTTGATTCAGGTACA +
Preference number: 4 (lower is better)
Translates to: SVPGFQQDMTGSCSMIGKDFVLG*KVDSGT
Trigger: TGTACCTGAATCAACCTTTCAGCCTAGGACGAAGTC...CTTTCCTATCATGGAGCATGAACCAGTCATATCCTGTTGAAAGCCTGGAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR GCA 90 bp AATTTGTTCTTCCACTTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTAAAGTGCGTTTCCGCTaGCCGCTTCTCTTGGGACAA +
Preference number: 4 (lower is better)
Translates to: NLFFHFETVRFKHESKARKVRFR*PLLLGQ
Trigger: TTGTCCCAAGAGAAGCGGGCAGCGGAAACGCACTTT...ACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAAGTGGAAGAACAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR CCA 90 bp AGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTTCCAGGCTTTCAACAGGATATGACTaGTTCATGCTCCATGATAGG +
Preference number: 4 (lower is better)
Translates to: RRCSAAVSFARLSFSSRLSTGYD*FMLHDR
Trigger: CCTATCATGGAGCATGAACCAGTCATATCCTGTTGA...AAGCCTGGAACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR TCA 90 bp AATTTGTTCTTCCACTTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTCCTGATCAATGTGTGTaGCATTCCGGATCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: NLFFHFETVRFKHESKARPDQCV*HSGSQR
Trigger: CCTTTGGGATCCGGAATGTCACACACATTGATCAGG...ACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAAGTGGAAGAACAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR TCA 90 bp ATTTGTTCTTCCACTTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTACTCCCAGGACAGGGATaGCCTGGAAGCTATATAGAT +
Preference number: 4 (lower is better)
Translates to: ICSSTLRLFDSNMSPRHVLPGQG*PGSYID
Trigger: ATCTATATAGCTTCCAGGTCATCCCTGTCCTGGGAG...TACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAAGTGGAAGAACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR TCA 90 bp AGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATGCTCTTCTATCATGTCCTTaGACTCTTCCTGAGACGGAA +
Preference number: 4 (lower is better)
Translates to: RLFDSNMSPRHVSLRGDALLSCP*TLPETE
Trigger: TTCCGTCTCAGGAAGAGTTCAAGGACATGATAGAAG...AGCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR GCA 90 bp GAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATGCTGCTGCTGTCTCATTTaGCAGATTATCCTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: ETVRFKHESKARILKRRCCCCLI*QIILQF
Trigger: GAACTGAAGGATAATCTGGCAAATGAGACAGCAGCA...GCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR GCA 90 bp CACGTATCCTTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTGCTGCTGTCTCATTTaGCAGATTATCCTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: HVSLRGDALLLSHLPDYPCCCLI*QIILQF
Trigger: GAACTGAAGGATAATCTGGCAAATGAGACAGCAGCA...AGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAAGGATACGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR GCA 90 bp CACGTATCCTTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTATCCTTAAGAGGAGATaGTCTGCTGCTGTCTCATTT +
Preference number: 4 (lower is better)
Translates to: HVSLRGDALLLSHLPDYPILKRR*SAAVSF
Trigger: AAATGAGACAGCAGCAGAGCATCTCCTCTTAAGGAT...AGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAAGGATACGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR CCA 90 bp TGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTTCCAGGCTTTCAACAAGGGGATTGTTCACTTaGCTAAATTCCAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: CSAAVSFARLSFSSRLSTRGLFT*LNSRQR
Trigger: TCTCTGTCTGGAATTTAGCCAAGTGAACAATCCCCT...TGTTGAAAGCCTGGAACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR CCA 90 bp GCACGTATCCTTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCGGTAAACTCGTTTACTaGTTCAGCACACAATTCTCA +
Preference number: 4 (lower is better)
Translates to: ARILKRRCSAAVSFARLSGKLVY*FSTQFS
Trigger: TGAGAATTGTGTGCTGAACCAGTAAACGAGTTTACC...GGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAAGGATACGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR TCA 90 bp AACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATGCTCTGCTGCTGTCTCATTTTGTTCTTCCACTTTaGGACTGTTCGATTCAAACA +
Preference number: 4 (lower is better)
Translates to: NMSPRHVSLRGDALLLSHFVLPL*DCSIQT
Trigger: TGTTTGAATCGAACAGTCTCAAAGTGGAAGAACAAA...ATGAGACAGCAGCAGAGCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR TCA 90 bp GCACGTATCCTTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCAGAGAAATTAGCAGTTaGGCAAAGATACAGACCAAA +
Preference number: 4 (lower is better)
Translates to: ARILKRRCSAAVSFARLSREISS*AKIQTK
Trigger: TTTGGTCTGTATCTTTGCTCAACTGCTAATTTCTCT...GGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAAGGATACGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR TCA 90 bp TCTTCCACTTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCTTACACTCACTTCAAAACTaGGCTTTAGGGGTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: SSTLRLFDSNMSPRHVSLHSLQN*ALGVVV
Trigger: TACAACCACCCCTAAAGCTCAGTTTTGAAGTGAGTG...TAAGGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAAGTGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR GCA 90 bp TTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTTCCACACCTTGTGAAAGCCTaGATCTTCTATCATGTCCTT +
Preference number: 4 (lower is better)
Translates to: LRGDALLLSHLPDYPSVPHLVKA*IFYHVL
Trigger: AAGGACATGATAGAAGATGCAGGCTTTCACAAGGTG...TGGAACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR GCA 90 bp AGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATGCTCACCTTGTGAAAGCCTaGATCTTCTATCATGTCCTT +
Preference number: 4 (lower is better)
Translates to: RLFDSNMSPRHVSLRGDAHLVKA*IFYHVL
Trigger: AAGGACATGATAGAAGATGCAGGCTTTCACAAGGTG...AGCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR GCA 90 bp TCCTTCAGTTCCAGGCTTTCAACAGGATATGACTGGTTCATGCTCCATGATAGGAATGAATGGCCACAATaGCTGATGTTAGACTTTCGT +
Preference number: 4 (lower is better)
Translates to: SFSSRLSTGYDWFMLHDRNEWPQ*LMLDFR
Trigger: ACGAAAGTCTAACATCAGGCATTGTGGCCATTCATT...CCTATCATGGAGCATGAACCAGTCATATCCTGTTGAAAGCCTGGAACTGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR CCA 90 bp ACACTCACTTCAAAACTGAGCTTTAGGGGTGGTTGTACCTTAACCACACACCCTTCCTTCCAAACACGATaGATACCAAGACTCATCATA +
Preference number: 4 (lower is better)
Translates to: TLTSKLSFRGGCTLTTHPSFQTR*IPRLII
Trigger: TATGATGAGTCTTGGTATCCATCGTGTTTGGAAGGA...AGGGTGTGTGGTTAAGGTACAACCACCCCTAAAGCTCAGTTTTGAAGTGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR CCA 90 bp AGTTCCAGGCTTTCAACAGGATATGACTGGTTCATGCTCCATGATAGGAAAGGACAGGATAAATTTTGTTaGGCCCTTAACTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSRLSTGYDWFMLHDRKGQDKFC*ALNCLF
Trigger: GAAGAGGCAGTTAAGGGCCCAACAAAATTTATCCTG...TCCTTTCCTATCATGGAGCATGAACCAGTCATATCCTGTTGAAAGCCTGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR CCA 90 bp TCCTTCAGTTCCAGGCTTTCAACAGGATATGACTGGTTCATGCTCCATGATAGGCATTCTGGTACTCTTTaGCAATTTCTTCCCAGGATA +
Preference number: 4 (lower is better)
Translates to: SFSSRLSTGYDWFMLHDRHSGTL*QFLPRI
Trigger: TATCCTGGGAAGAAATTGCCAAAGAGTACCAGAATG...CCTATCATGGAGCATGAACCAGTCATATCCTGTTGAAAGCCTGGAACTGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR CCA 90 bp TTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTTCCATCAACAGGATATGACTaGTTCATGCTCCATGATAGG +
Preference number: 4 (lower is better)
Translates to: LRGDALLLSHLPDYPSVPSTGYD*FMLHDR
Trigger: CCTATCATGGAGCATGAACCAGTCATATCCTGTTGA...TGGAACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR TCA 90 bp AATTTGTTCTTCCACTTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTAGTTTGAAGCCAGAATaGATGGCCACAATGCCTGAT +
Preference number: 4 (lower is better)
Translates to: NLFFHFETVRFKHESKARSLKPE*MATMPD
Trigger: ATCAGGCATTGTGGCCATTCATTCTGGCTTCAAACT...ACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAAGTGGAAGAACAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR TCA 90 bp TTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTTCCAGTCATTGGGTTCAAATaGTCTATCATCCCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: LRGDALLLSHLPDYPSVPVIGFK*SIIPLE
Trigger: TTCTAGAGGGATGATAGATCATTTGAACCCAATGAC...TGGAACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR GCA 90 bp AGTTCCAGGCTTTCAACAGGATATGACTGGTTCATGCTCCATGATAGGAAAGGAAATGAATGGCCACAATaGCTGATGTTAGACTTTCGT +
Preference number: 4 (lower is better)
Translates to: SSRLSTGYDWFMLHDRKGNEWPQ*LMLDFR
Trigger: ACGAAAGTCTAACATCAGGCATTGTGGCCATTCATT...TCCTTTCCTATCATGGAGCATGAACCAGTCATATCCTGTTGAAAGCCTGGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR GCA 90 bp TTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTTCCAGATATGACTGGTTCATaGTCCATGATAGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LRGDALLLSHLPDYPSVPDMTGS*SMIGKE
Trigger: TTCCTTTCCTATCATGGAGCATGAACCAGTCATATC...TGGAACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR GCA 90 bp CACTTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGGATATGACTGGTTCATaGTCCATGATAGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: HFETVRFKHESKARILKRDMTGS*SMIGKE
Trigger: TTCCTTTCCTATCATGGAGCATGAACCAGTCATATC...CCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR GCA 90 bp TTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGAATCCTTAAGAGGAGATaGTCTGCTGCTGTCTCATTT +
Preference number: 4 (lower is better)
Translates to: FETVRFKHESKARILKRRILKRR*SAAVSF
Trigger: AAATGAGACAGCAGCAGAGCATCTCCTCTTAAGGAT...TCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR CCA 90 bp TGTTCTTCCACTTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCTCCTTCCAAACACGATaGATACCAAGACTCATCATA +
Preference number: 4 (lower is better)
Translates to: CSSTLRLFDSNMSPRHVSSFQTR*IPRLII
Trigger: TATGATGAGTCTTGGTATCCATCGTGTTTGGAAGGA...GGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAAGTGGAAGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR TCA 90 bp AGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATGCTTTTGTTCTTCCACTTTaGGACTGTTCGATTCAAACA +
Preference number: 4 (lower is better)
Translates to: RLFDSNMSPRHVSLRGDAFVLPL*DCSIQT
Trigger: TGTTTGAATCGAACAGTCTCAAAGTGGAAGAACAAA...AGCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR CCA 90 bp ATCCTTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTGGATCCCAAAGGCAATaGTGTAAATATCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: ILKRRCSAAVSFARLSFSGSQRQ*CKYQTC
Trigger: ACAAGTTTGATATTTACACCATTGCCTTTGGGATCC...ACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR CCA 90 bp TTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTTCCAGGATCCCAAAGGCAATaGTGTAAATATCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: LRGDALLLSHLPDYPSVPGSQRQ*CKYQTC
Trigger: ACAAGTTTGATATTTACACCATTGCCTTTGGGATCC...TGGAACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR CCA 90 bp AGTTCCAGGCTTTCAACAGGATATGACTGGTTCATGCTCCATGATAGGAAAGGAGAATCTTCTTCATTCTaGTACTCTTTGGCAATTTCT +
Preference number: 4 (lower is better)
Translates to: SSRLSTGYDWFMLHDRKGESSSF*YSLAIS
Trigger: AGAAATTGCCAAAGAGTACCAGAATGAAGAAGATTC...TCCTTTCCTATCATGGAGCATGAACCAGTCATATCCTGTTGAAAGCCTGGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS GCA 90 bp CACCCCCTCTCCACTATATATACAGTCCATCCGGGTTCTTTGAGATaGTGTTTGGCGACTCGTCGCCATTCCCGGAGCAGGTCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: HPLSTIYTVHPGSLR*CLATRRHSRSRSAS
Trigger: CGAGGCCGACCTGCTCCGGGAATGGCGACGAGTCGCCAAACAGCATCTCAAAGAACCCGGATGGACTGTATATATAGTGGAGAGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551769.1
CDS CCA 90 bp GACACAGTCTCAAACCCAAAGTGCGTTTCCGCTGCCCGCTTCTCTTaGGACAAGAGCCGAGCACTTAGTAGGTCCCCGGGCCAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: DTVSNPKCVSAARFS*DKSRALSRSPGQEL
Trigger: TAGCTCTTGGCCCGGGGACCTACTAAGTGCTCGGCTCTTGTCCCAAGAGAAGCGGGCAGCGGAAACGCACTTTGGGTTTGAGACTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288532.11
ENST00000445328.6
ENST00000547448.1
ENST00000547736.1
ENST00000547943.5
ENST00000552443.5
CDS TCA 90 bp AGACTCACCCCCTCTCCACTATATATACAGTCCATCCGGGTTCTTTaGGATGCTGTTTGGCGACTCGTCGCCATTCCCGGAGCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: RLTPSPLYIQSIRVL*DAVWRLVAIPGAGR
Trigger: CCGACCTGCTCCGGGAATGGCGACGAGTCGCCAAACAGCATCTCAAAGAACCCGGATGGACTGTATATATAGTGGAGAGGGGGTGAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551769.1
CDS GCA 90 bp CCTGTGCCTCCAGCAACATCAAGCAGCTGGGTCCCAGGAAGCGGGTaGATCTTCCAGAGCAGCAAATCCTTCCAAACACGATGGATACCA +
Preference number: 5 (lower is better)
Translates to: PVPPATSSSWVPGSG*IFQSSKSFQTRWIP
Trigger: TGGTATCCATCGTGTTTGGAAGGATTTGCTGCTCTGGAAGATGCACCCGCTTCCTGGGACCCAGCTGCTTGATGTTGCTGGAGGCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288532.11
ENST00000445328.6
ENST00000551769.1
ENST00000552443.5
CDS CCA 90 bp AACCGGAATGCAATGTCACCTGTGCCTCCAGCAACATCAAGCAGCTaGGTCCCAGGAAGCGGGTGCATCTTCCAGAGCAGCAAATCCTTC +
Preference number: 5 (lower is better)
Translates to: NRNAMSPVPPATSSS*VPGSGCIFQSSKSF
Trigger: GAAGGATTTGCTGCTCTGGAAGATGCACCCGCTTCCTGGGACCCAGCTGCTTGATGTTGCTGGAGGCACAGGTGACATTGCATTCCGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288532.11
ENST00000551769.1
ENST00000552443.5
CDS CCA 90 bp CCTAATACCCATGCAAGTCCTGTGCCTCCAGCAACATCAAGCAGCTaGGTCCCAGGAAGCGGGTGCATCTTCCAGAGCAGCAAATCCTTC +
Preference number: 5 (lower is better)
Translates to: PNTHASPVPPATSSS*VPGSGCIFQSSKSF
Trigger: GAAGGATTTGCTGCTCTGGAAGATGCACCCGCTTCCTGGGACCCAGCTGCTTGATGTTGCTGGAGGCACAGGACTTGCATGGGTATTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445328.6
CDS-3UTR CAA 90 bp TTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATGCTCTGCTGCGCTGCCCGCTTCTCTaGGGACAAGAGCCGAGCACT +
Preference number: 5 (lower is better)
Translates to: FDSNMSPRHVSLRGDALLRCPLL*GQEPST
Trigger: AGTGCTCGGCTCTTGTCCCAAGAGAAGCGGGCAGCG...CAGCAGAGCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR CAA 90 bp TGTTCTTCCACTTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCCGCTGCCCGCTTCTCTaGGGACAAGAGCCGAGCACT +
Preference number: 5 (lower is better)
Translates to: CSSTLRLFDSNMSPRHVSRCPLL*GQEPST
Trigger: AGTGCTCGGCTCTTGTCCCAAGAGAAGCGGGCAGCG...GGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAAGTGGAAGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS CCA 90 bp GGGATTGTTCACTTGGCTAAATTCCAGACAGAGAAACCGTCCTCCTaGTTTCAGCACCCGATGAGCTTCCTGGAGTGCCTGATCAATGTG +
Preference number: 5 (lower is better)
Translates to: GIVHLAKFQTEKPSS*FQHPMSFLECLINV
Trigger: CACATTGATCAGGCACTCCAGGAAGCTCATCGGGTGCTGAAACCAGGAGGACGGTTTCTCTGTCTGGAATTTAGCCAAGTGAACAATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288532.11
ENST00000445328.6
ENST00000552443.5
CDS TCA 90 bp CTTGAGCCAAGGCTTTCTGCTTTCCAACCTTTAGCATCTCCTTGTTaGTGTCACACACCACGACACGAGACCCGCCCAAGGAATCTTCTT +
Preference number: 5 (lower is better)
Translates to: LEPRLSAFQPLASPC*CHTPRHETRPRNLL
Trigger: AAGAAGATTCCTTGGGCGGGTCTCGTGTCGTGGTGTGTGACATCAACAAGGAGATGCTAAAGGTTGGAAAGCAGAAAGCCTTGGCTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288532.11
ENST00000546838.1
ENST00000547943.5
ENST00000551769.1
ENST00000552443.5
CDS CCA 90 bp CGACACGAGACCCGCCCAAGGAATCTTCTTCATTCTGGTACTCTTTaGCAATTTCTTCCCAGGATAAATTTTGTTGGGCCCTTAACTGCC +
Preference number: 5 (lower is better)
Translates to: RHETRPRNLLHSGTL*QFLPRINFVGPLTA
Trigger: GGCAGTTAAGGGCCCAACAAAATTTATCCTGGGAAGAAATTGCCAAAGAGTACCAGAATGAAGAAGATTCCTTGGGCGGGTCTCGTGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288532.11
ENST00000547943.5
ENST00000551769.1
ENST00000552443.5
CDS-3UTR CAA 90 bp AGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTTCCAGGCTTGAGGGGATTGTTCACTaGGCTAAATTCCAGACAGAG +
Preference number: 5 (lower is better)
Translates to: RRCSAAVSFARLSFSSRLEGIVH*AKFQTE
Trigger: CTCTGTCTGGAATTTAGCCAAGTGAACAATCCCCTC...AAGCCTGGAACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR CAA 90 bp AGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTTCAGTTCCAGGCTTTCATTCTGGTACTCTTaGGCAATTTCTTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: RRCSAAVSFARLSFSSRLSFWYS*AISSQD
Trigger: ATCCTGGGAAGAAATTGCCAAAGAGTACCAGAATGA...AAGCCTGGAACTGAAGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR CAA 90 bp TTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATGCTCTGCTGTTTAGCATCTCCTTGTaGATGTCACACACCACGACA +
Preference number: 5 (lower is better)
Translates to: FDSNMSPRHVSLRGDALLFSISL*MSHTTT
Trigger: TGTCGTGGTGTGTGACATCAACAAGGAGATGCTAAA...CAGCAGAGCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR CAA 90 bp AGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGATGCTACCTTTAGCATCTCCTaGTTGATGTCACACACCACG +
Preference number: 5 (lower is better)
Translates to: RLFDSNMSPRHVSLRGDATFSIS*LMSHTT
Trigger: CGTGGTGTGTGACATCAACAAGGAGATGCTAAAGGT...AGCATCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR CAA 90 bp TCTTCCACTTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCTTATCCAGCTCTGTATCCTaGAGCCAAGGCTTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: SSTLRLFDSNMSPRHVSLSSSVS*SQGFLL
Trigger: AAGCAGAAAGCCTTGGCTCAAGGATACAGAGCTGGA...TAAGGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAAGTGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288532.11
CDS-3UTR CAA 90 bp TGTTCTTCCACTTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCGAGGGGATTGTTCACTaGGCTAAATTCCAGACAGAG +
Preference number: 5 (lower is better)
Translates to: CSSTLRLFDSNMSPRHVSEGIVH*AKFQTE
Trigger: CTCTGTCTGGAATTTAGCCAAGTGAACAATCCCCTC...GGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAAGTGGAAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS TCA 90 bp CCTTCTTTCCTCACTCACTGTAGCTCTACAACAGAGGTAATTTCCTaGGAGTCATACAAGCTGAGGATGCAGCCATTCATACCTGATCAA +
Preference number: 5 (lower is better)
Translates to: PSFLTHCSSTTEVIS*ESYKLRMQPFIPDQ
Trigger: TTGATCAGGTATGAATGGCTGCATCCTCAGCTTGTATGACTCTCAGGAAATTACCTCTGTTGTAGAGCTACAGTGAGTGAGGAAAGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546838.1
CDS CCA 90 bp GGAAGCGGGTGCATCTTCCAGAGCAGCAAATCCTTCCAAACACGATaGATACCAAGACTCATCATATCATTCATCACATCATACTTCTTA +
Preference number: 5 (lower is better)
Translates to: GSGCIFQSSKSFQTR*IPRLIISFITSYFL
Trigger: TAAGAAGTATGATGTGATGAATGATATGATGAGTCTTGGTATCCATCGTGTTTGGAAGGATTTGCTGCTCTGGAAGATGCACCCGCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288532.11
ENST00000445328.6
ENST00000547736.1
ENST00000551769.1
ENST00000552443.5
CDS TCA 90 bp TCATACAAGCTGAGGATGCAGCCATTCATACCTGATCAATGTGTGTaGCATTCCGGATCCCAAAGGCAATGGTGTAAATATCAAACTTGT +
Preference number: 5 (lower is better)
Translates to: SYKLRMQPFIPDQCV*HSGSQRQWCKYQTC
Trigger: ACAAGTTTGATATTTACACCATTGCCTTTGGGATCCGGAATGTCACACACATTGATCAGGTATGAATGGCTGCATCCTCAGCTTGTATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546838.1
CDS-3UTR CAA 90 bp CACGTATCCTTAAGAGGAGATGCTCTGCTGCTGTCTCATTTGCCAGATTATCCTATTTGTTCTTCCACTTaGAGACTGTTCGATTCAAAC +
Preference number: 5 (lower is better)
Translates to: HVSLRGDALLLSHLPDYPICSST*RLFDSN
Trigger: GTTTGAATCGAACAGTCTCAAAGTGGAAGAACAAAT...AGGATAATCTGGCAAATGAGACAGCAGCAGAGCATCTCCTCTTAAGGATACGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS-3UTR CAA 90 bp TTTGAGACTGTTCGATTCAAACATGAGTCCAAGGCACGTATCCTTAAGAGGAGAATTTGTTCTTCCACTTaGAGACTGTTCGATTCAAAC +
Preference number: 5 (lower is better)
Translates to: FETVRFKHESKARILKRRICSST*RLFDSN
Trigger: GTTTGAATCGAACAGTCTCAAAGTGGAAGAACAAAT...TCTCCTCTTAAGGATACGTGCCTTGGACTCATGTTTGAATCGAACAGTCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS GCA 90 bp GATTATCCTTCAGTTCCAGGCTTTCAACAGGATATGACTGGTTCATaGTCCATGATAGGAAAGGAATTAAAGTTTGAAGCCAGAATGAAT +
Preference number: 5 (lower is better)
Translates to: DYPSVPGFQQDMTGS*SMIGKELKFEARMN
Trigger: ATTCATTCTGGCTTCAAACTTTAATTCCTTTCCTATCATGGAGCATGAACCAGTCATATCCTGTTGAAAGCCTGGAACTGAAGGATAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS CCA 72 bp AGGTCCCCGGGCCAAGAGCTACGAAGCCCGAGGAGCTaGCAGCCCCGCATCGCCCGCGACCACCCACGGCCG +
Preference number: 6 (lower is better)
Translates to: RSPGQELRSPRS*QPRIARDHPRP
Trigger: CGGCCGTGGGTGGTCGCGGGCGATGCGGGGCTGCCAGCTCCTCGGGCTTCGTAGCTCTTGGCCCGGGGACCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000288532.11
ENST00000445328.6
ENST00000547448.1
ENST00000547736.1
ENST00000547943.5
ENST00000552443.5
CDS CCA 72 bp TCAAACCCAAAGTGCGTTTCCGCTGCCCGCTTCTCTTaGGACAAGAGCCGAGCACTTAGTAGGTCCCCGGGC +
Preference number: 6 (lower is better)
Translates to: SNPKCVSAARFS*DKSRALSRSPG
Trigger: GCCCGGGGACCTACTAAGTGCTCGGCTCTTGTCCCAAGAGAAGCGGGCAGCGGAAACGCACTTTGGGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288532.11
ENST00000445328.6
ENST00000547448.1
ENST00000547736.1
ENST00000547943.5
ENST00000552443.5
CDS CCA 72 bp CATGCAAGTCCTGTGCCTCCAGCAACATCAAGCAGCTaGGTCCCAGGAAGCGGGTGCATCTTCCAGAGCAGC +
Preference number: 6 (lower is better)
Translates to: HASPVPPATSSS*VPGSGCIFQSS
Trigger: GCTGCTCTGGAAGATGCACCCGCTTCCTGGGACCCAGCTGCTTGATGTTGCTGGAGGCACAGGACTTGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445328.6
CDS CAA 90 bp CTCTCCACTATATATACAGTCCATCCGGGTTCTTTGAGATGCTGTTaGGCGACTCGTCGCCATTCCCGGAGCAGGTCGGCCTCGGCCCAG +
Preference number: 6 (lower is better)
Translates to: LSTIYTVHPGSLRCC*ATRRHSRSRSASAQ
Trigger: CTGGGCCGAGGCCGACCTGCTCCGGGAATGGCGACGAGTCGCCAAACAGCATCTCAAAGAACCCGGATGGACTGTATATATAGTGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551769.1
CDS CAA 72 bp ATATATACAGTCCATCCGGGTTCTTTGAGATGCTGTTaGGCGACTCGTCGCCATTCCCGGAGCAGGTCGGCC +
Preference number: 6 (lower is better)
Translates to: IYTVHPGSLRCC*ATRRHSRSRSA
Trigger: GGCCGACCTGCTCCGGGAATGGCGACGAGTCGCCAAACAGCATCTCAAAGAACCCGGATGGACTGTATATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551769.1
CDS CAA 72 bp GCCAAGGCTTTCTGCTTTCCAACCTTTAGCATCTCCTaGTTGATGTCACACACCACGACACGAGACCCGCCC +
Preference number: 6 (lower is better)
Translates to: AKAFCFPTFSIS*LMSHTTTRDPP
Trigger: GGGCGGGTCTCGTGTCGTGGTGTGTGACATCAACAAGGAGATGCTAAAGGTTGGAAAGCAGAAAGCCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288532.11
ENST00000546838.1
ENST00000547943.5
ENST00000551769.1
ENST00000552443.5
CDS CAA 72 bp CCCCTCTCCACTATATATACAGTCCATCCGGGTTCTTaGAGATGCTGTTTGGCGACTCGTCGCCATTCCCGG +
Preference number: 6 (lower is better)
Translates to: PLSTIYTVHPGS*RCCLATRRHSR
Trigger: CCGGGAATGGCGACGAGTCGCCAAACAGCATCTCAAAGAACCCGGATGGACTGTATATATAGTGGAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551769.1
CDS TCA 72 bp AGGCTTTCTGCTTTCCAACCTTTAGCATCTCCTTGTTaGTGTCACACACCACGACACGAGACCCGCCCAAGG +
Preference number: 6 (lower is better)
Translates to: RLSAFQPLASPC*CHTPRHETRPR
Trigger: CCTTGGGCGGGTCTCGTGTCGTGGTGTGTGACATCAACAAGGAGATGCTAAAGGTTGGAAAGCAGAAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288532.11
ENST00000546838.1
ENST00000547943.5
ENST00000551769.1
ENST00000552443.5
CDS TCA 72 bp CCCTCTCCACTATATATACAGTCCATCCGGGTTCTTTaGGATGCTGTTTGGCGACTCGTCGCCATTCCCGGA +
Preference number: 6 (lower is better)
Translates to: PSPLYIQSIRVL*DAVWRLVAIPG
Trigger: TCCGGGAATGGCGACGAGTCGCCAAACAGCATCTCAAAGAACCCGGATGGACTGTATATATAGTGGAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551769.1
CDS GCA 72 bp TCCACTATATATACAGTCCATCCGGGTTCTTTGAGATaGTGTTTGGCGACTCGTCGCCATTCCCGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: STIYTVHPGSLR*CLATRRHSRSR
Trigger: CCTGCTCCGGGAATGGCGACGAGTCGCCAAACAGCATCTCAAAGAACCCGGATGGACTGTATATATAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551769.1
CDS GCA 72 bp CTGCAACGTCCACCTCCCAGGTTCAAGAAATTTGCCTaGCTCAGCCTCCTAATTAGCTGTGATTACAGGCGT +
Preference number: 6 (lower is better)
Translates to: LQRPPPRFKKFA*LSLLISCDYRR
Trigger: ACGCCTGTAATCACAGCTAATTAGGAGGCTGAGGCAGGCAAATTTCTTGAACCTGGGAGGTGGACGTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547448.1
CDS CAA 90 bp ACGACACGAGACCCGCCCAAGGAATCTTCTTCATTCTGGTACTCTTaGGCAATTTCTTCCCAGGATAAATTTTGTTGGGCCCTTAACTGC +
Preference number: 6 (lower is better)
Translates to: TTRDPPKESSSFWYS*AISSQDKFCWALNC
Trigger: GCAGTTAAGGGCCCAACAAAATTTATCCTGGGAAGAAATTGCCAAAGAGTACCAGAATGAAGAAGATTCCTTGGGCGGGTCTCGTGTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288532.11
ENST00000547943.5
ENST00000551769.1
ENST00000552443.5
CDS TCA 72 bp TCTCCTAATACCCATGCAAGTCCAGCTCTGTATCCTTaGGCCAAGGCTTTCTGCTTTCCAACCTTTAGCATC +
Preference number: 6 (lower is better)
Translates to: SPNTHASPALYP*AKAFCFPTFSI
Trigger: GATGCTAAAGGTTGGAAAGCAGAAAGCCTTGGCTCAAGGATACAGAGCTGGACTTGCATGGGTATTAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288532.11
ENST00000546838.1
ENST00000547943.5
ENST00000551769.1
ENST00000552443.5
CDS TCA 72 bp AGAGTCATACAAGCTGAGGATGCAGCCATTCATACCTaGTCAATGTGTGTGACATTCCGGATCCCAAAGGCA +
Preference number: 6 (lower is better)
Translates to: RVIQAEDAAIHT*SMCVTFRIPKA
Trigger: TGCCTTTGGGATCCGGAATGTCACACACATTGATCAGGTATGAATGGCTGCATCCTCAGCTTGTATGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546838.1
CDS CCA 72 bp ACCCGCCCAAGGAATCTTCTTCATTCTGGTACTCTTTaGCAATTTCTTCCCAGGATAAATTTTGTTGGGCCC +
Preference number: 6 (lower is better)
Translates to: TRPRNLLHSGTL*QFLPRINFVGP
Trigger: GGGCCCAACAAAATTTATCCTGGGAAGAAATTGCCAAAGAGTACCAGAATGAAGAAGATTCCTTGGGCGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288532.11
ENST00000547943.5
ENST00000551769.1
ENST00000552443.5
CDS CCA 72 bp CTGGGCGACAGAGAGAGACTCAACATGAACAAGAAATaGAGCTGTGACAAAAAGGTTGAAGATGTCCCAGAA +
Preference number: 6 (lower is better)
Translates to: LGDRERLNMNKK*SCDKKVEDVPE
Trigger: TTCTGGGACATCTTCAACCTTTTTGTCACAGCTCCATTTCTTGTTCATGTTGAGTCTCTCTCTGTCGCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547736.1
CDS TCA 72 bp CTCACTCACTGTAGCTCTACAACAGAGGTAATTTCCTaGGAGTCATACAAGCTGAGGATGCAGCCATTCATA +
Preference number: 6 (lower is better)
Translates to: LTHCSSTTEVIS*ESYKLRMQPFI
Trigger: TATGAATGGCTGCATCCTCAGCTTGTATGACTCTCAGGAAATTACCTCTGTTGTAGAGCTACAGTGAGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546838.1
CDS GCA 72 bp TCAGTTCCAGGCTTTCAACAGGATATGACTGGTTCATaGTCCATGATAGGAAAGGAATTAAAGTTTGAAGCC +
Preference number: 6 (lower is better)
Translates to: SVPGFQQDMTGS*SMIGKELKFEA
Trigger: GGCTTCAAACTTTAATTCCTTTCCTATCATGGAGCATGAACCAGTCATATCCTGTTGAAAGCCTGGAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288532.11
ENST00000445328.6
CDS CCA 72 bp TGCATCTTCCAGAGCAGCAAATCCTTCCAAACACGATaGATACCAAGACTCATCATATCATTCATCACATCA +
Preference number: 6 (lower is better)
Translates to: CIFQSSKSFQTR*IPRLIISFITS
Trigger: TGATGTGATGAATGATATGATGAGTCTTGGTATCCATCGTGTTTGGAAGGATTTGCTGCTCTGGAAGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288532.11
ENST00000445328.6
ENST00000547736.1
ENST00000551769.1
ENST00000552443.5
CDS CCA 72 bp ACTTTCAAACACCTGATAGACAACATGAACAAGAAATaGAGCTGTGACAAAAAGGTTGAAGATGTCCCAGAA +
Preference number: 6 (lower is better)
Translates to: TFKHLIDNMNKK*SCDKKVEDVPE
Trigger: TTCTGGGACATCTTCAACCTTTTTGTCACAGCTCCATTTCTTGTTCATGTTGTCTATCAGGTGTTTGAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552443.5