Pregenerated sensors for COQ10B (Homo sapiens)
Ensembl gene IDs: ENSG00000115520Ensembl transcript IDs: ENST00000263960.6, ENST00000409010.1, ENST00000409398.5, ENST00000488445.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CATGATAGACTCTCCGAAGCCGGTCGTCACCTCCCGGACCAGCCCTaGAGCACCGCCCTCCTCTGGTCGGGCCCGGAGCCCGGCTCCGGT | + |
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Preference number: 5 (lower is better) Translates to: HDRLSEAGRHLPDQP*STALLWSGPEPGSG Trigger: ACCGGAGCCGGGCTCCGGGCCCGACCAGAGGAGGGCGGTGCTGCAGGGCTGGTCCGGGAGGTGACGACCGGCTTCGGAGAGTCTATCATG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263960.6 |
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| CDS GCA 90 bp | ATAGGGGAGGAGACCGGAAGAGCCCAAAGGCACCAATGGCCAAATTaGTTCCAAAGTCGCTTCGCCGATGATTCACCGCCTCTCACGAGG | + |
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Preference number: 5 (lower is better) Translates to: IGEETGRAQRHQWPN*FQSRFADDSPPLTR Trigger: CCTCGTGAGAGGCGGTGAATCATCGGCGAAGCGACTTTGGAAGCAATTTGGCCATTGGTGCCTTTGGGCTCTTCCGGTCTCCTCCCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409010.1 ENST00000488445.1 |
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| CDS TCA 90 bp | CCAAAGGCACCAATGGCCAAATTGCTTCCAAAGTCGCTTCGCCGATaGTTCACCGCCTCTCACGAGGCAAACGAGCCACGAACACAGCCT | + |
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Preference number: 5 (lower is better) Translates to: PKAPMAKLLPKSLRR*FTASHEANEPRTQP Trigger: AGGCTGTGTTCGTGGCTCGTTTGCCTCGTGAGAGGCGGTGAATCATCGGCGAAGCGACTTTGGAAGCAATTTGGCCATTGGTGCCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409010.1 ENST00000488445.1 |
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| CDS CCA 90 bp | GGGCAAAGCACTCTTTCAGAAATTGGGAAAACGCATCTGACCATCTaGCAGGTAGAAGGAACCGGAGAAGGGGGCTCACCGCCAAACACA | + |
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Preference number: 5 (lower is better) Translates to: GQSTLSEIGKTHLTI*QVEGTGEGGSPPNT Trigger: TGTGTTTGGCGGTGAGCCCCCTTCTCCGGTTCCTTCTACCTGCCAGATGGTCAGATGCGTTTTCCCAATTTCTGAAAGAGTGCTTTGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488445.1 |
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| CDS CCA 72 bp | CGGGCCCGGAGCCCGGCTCCGGTCTCTTCCAGCCAATaGACTGGCCGCCTGCGCAGCCTGACACGCCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: RARSPAPVSSSQ*TGRLRSLTRPF Trigger: GAAGGGGCGTGTCAGGCTGCGCAGGCGGCCAGTCCATTGGCTGGAAGAGACCGGAGCCGGGCTCCGGGCCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263960.6 |
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| CDS GCA 72 bp | TCCTGCATTGAATATCTGCCATTCCGCACGGGCGCCTaGGCCCCGGCCGCTGTCGCCGACTTCGGACGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SCIEYLPFRTGA*APAAVADFGRH Trigger: ATGCCGTCCGAAGTCGGCGACAGCGGCCGGGGCGCAGGCGCCCGTGCGGAATGGCAGATATTCAATGCAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409398.5 |
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| CDS TCA 72 bp | GGCAAACGAGCCACGAACACAGCCTTGGGCCCAAGGTaGTGCGCGCCGCTCTTGAGTCCCTCAGATGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: GKRATNTALGPR*CAPLLSPSDAK Trigger: TTTGGCATCTGAGGGACTCAAGAGCGGCGCGCATCACCTTGGGCCCAAGGCTGTGTTCGTGGCTCGTTTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409010.1 ENST00000488445.1 |
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| CDS GCA 72 bp | GACTACCCTTCTCAAGGCCGTATGACCAGTCCGAGCTaGCATGATAGACTCTCCGAAGCCGGTCGTCACCTC | + |
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Preference number: 6 (lower is better) Translates to: DYPSQGRMTSPS*HDRLSEAGRHL Trigger: GAGGTGACGACCGGCTTCGGAGAGTCTATCATGGCAGCTCGGACTGGTCATACGGCCTTGAGAAGGGTAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263960.6 ENST00000409398.5 |
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| CDS GCA 72 bp | GAGACCGGAAGAGCCCAAAGGCACCAATGGCCAAATTaGTTCCAAAGTCGCTTCGCCGATGATTCACCGCCT | + |
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Preference number: 6 (lower is better) Translates to: ETGRAQRHQWPN*FQSRFADDSPP Trigger: AGGCGGTGAATCATCGGCGAAGCGACTTTGGAAGCAATTTGGCCATTGGTGCCTTTGGGCTCTTCCGGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409010.1 ENST00000488445.1 |
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| CDS CCA 72 bp | ACTCTTTCAGAAATTGGGAAAACGCATCTGACCATCTaGCAGGTAGAAGGAACCGGAGAAGGGGGCTCACCG | + |
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Preference number: 6 (lower is better) Translates to: TLSEIGKTHLTI*QVEGTGEGGSP Trigger: CGGTGAGCCCCCTTCTCCGGTTCCTTCTACCTGCCAGATGGTCAGATGCGTTTTCCCAATTTCTGAAAGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488445.1 |
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