RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COQ10A (Homo sapiens)

Ensembl gene IDs: ENSG00000135469

Ensembl transcript IDs: ENST00000308197.10, ENST00000433805.6, ENST00000546544.5, ENST00000546614.1, ENST00000549545.1, ENST00000550071.1, ENST00000551566.1, ENST00000551814.1, ENST00000551911.5, ENST00000553234.1

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATaGTGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCAT +
Preference number: 1 (lower is better)
Translates to: HIVLILIRSEKAAGI*CSYDGPDPFLSTSH
Trigger: ATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
3UTR GCA 90 bp ATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTaGTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTC +
Preference number: 1 (lower is better)
Translates to: IVLILIRSEKAAGIW*SYDGPDPFLSTSHF
Trigger: GAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
3UTR CCA 90 bp CTTCTCTTTCCCCCAACATTTCCAGCCAGCATAGAACCCAATTTCTaGGAAATTGAGAGGAGAAACAGTATTATGAACACAGACTCCTTT +
Preference number: 1 (lower is better)
Translates to: LLFPPTFPASIEPNF*EIERRNSIMNTDSF
Trigger: AAAGGAGTCTGTGTTCATAATACTGTTTCTCCTCTCAATTTCCCAGAAATTGGGTTCTATGCTGGCTGGAAATGTTGGGGGAAAGAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
3UTR-3UTR GCA 90 bp CGTTTCCGTTCAGTACTTTTCTCCTCAGCACTGGTGGTAAGAAAGCCCCTTGCTGCTGCAGGCATATGGTaGTCCTACGATGGGCCTGAC +
Preference number: 2 (lower is better)
Translates to: RFRSVLFSSALVVRKPLAAAGIW*SYDGPD
Trigger: GTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGC...AGCAAGGGGCTTTCTTACCACCAGTGCTGAGGAGAAAAGTACTGAACGGAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
3UTR-3UTR CCA 90 bp AGGTTGCCTTTTCTCCTGAGGAATCTCAGGCAGGGTAAAAGTTACTTACCACTCAAGGCTGCAGGCATATaGTGCTCCTACGATGGGCCT +
Preference number: 2 (lower is better)
Translates to: RLPFLLRNLRQGKSYLPLKAAGI*CSYDGP
Trigger: AGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTT...GAGTGGTAAGTAACTTTTACCCTGCCTGAGATTCCTCAGGAGAAAAGGCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
3UTR-3UTR CCA 90 bp TTGCTCTCTAGTAGCCAGGCAGCATGGACTTACAGTCTTAAAATGAGGCTTTATAAGGCTGCAGGCATATaGTGCTCCTACGATGGGCCT +
Preference number: 2 (lower is better)
Translates to: LLSSSQAAWTYSLKMRLYKAAGI*CSYDGP
Trigger: AGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTT...ATAAAGCCTCATTTTAAGACTGTAAGTCCATGCTGCCTGGCTACTAGAGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
3UTR-3UTR GCA 90 bp GTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAGCTGCAGGCATATGGTaGTCCTACGATGGGCCTGAC +
Preference number: 2 (lower is better)
Translates to: VLIRSRDNHIVLILIRSEAAGIW*SYDGPD
Trigger: GTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGC...TTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
3UTR-3UTR TCA 90 bp ATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGGAGAAACAGTATTATaGACACAGACTCCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: ILIRSEKAAGIWCSYDGPGETVL*TQTPFK
Trigger: TTTGAAAGGAGTCTGTGTTCATAATACTGTTTCTCC...AGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
3UTR-3UTR TCA 90 bp TACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACATCCTTTGCCTTGGAGAAACAGTATTATaGACACAGACTCCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: YDGPDPFLSTSHFHILCLGETVL*TQTPFK
Trigger: TTTGAAAGGAGTCTGTGTTCATAATACTGTTTCTCC...AAGGCAAAGGATGTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
3UTR-3UTR CCA 90 bp TACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACATCCTTTGCCTTATAGAACCCAATTTCTaGGAAATTGAGAGGAGAAAC +
Preference number: 2 (lower is better)
Translates to: YDGPDPFLSTSHFHILCLIEPNF*EIERRN
Trigger: GTTTCTCCTCTCAATTTCCCAGAAATTGGGTTCTAT...AAGGCAAAGGATGTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
3UTR-3UTR CCA 90 bp TCCTTAGAAAAGTTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGATAGAACCCAATTTCTaGGAAATTGAGAGGAGAAAC +
Preference number: 2 (lower is better)
Translates to: SLEKLLSSPGQTLRCLDKIEPNF*EIERRN
Trigger: GTTTCTCCTCTCAATTTCCCAGAAATTGGGTTCTAT...CTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAACTTTTCTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
3UTR-3UTR TCA 90 bp GTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAGGAGAAACAGTATTATaGACACAGACTCCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: VLIRSRDNHIVLILIRSEGETVL*TQTPFK
Trigger: TTTGAAAGGAGTCTGTGTTCATAATACTGTTTCTCC...TTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
3UTR-3UTR TCA 90 bp ACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATGGAGAAACAGTATTATaGACACAGACTCCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: TLRCLDKVQRQPHSPYSNGETVL*TQTPFK
Trigger: TTTGAAAGGAGTCTGTGTTCATAATACTGTTTCTCC...ATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
3UTR-3UTR CAA 90 bp TTTCTCCTCAGCACTGGTGGTAAGAAAGCCCCTTGCTCTCTAGTAGCCAGGCAGCAGACTCCTTTCAAATaGGAACAGGAGCCAAACCAA +
Preference number: 3 (lower is better)
Translates to: FLLSTGGKKAPCSLVARQQTPFK*EQEPNQ
Trigger: TTGGTTTGGCTCCTGTTCCAATTTGAAAGGAGTCTG...CTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACCACCAGTGCTGAGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
3UTR GCA 72 bp ATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTaGTCCTACGATGGGCCTGACCCTTTCCTAAGCACA +
Preference number: 3 (lower is better)
Translates to: ILIRSEKAAGIW*SYDGPDPFLST
Trigger: TGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
3UTR CCA 72 bp CTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATaGTGCTCCTACGATGGGCCTGACCCTTTCCTAAGC +
Preference number: 3 (lower is better)
Translates to: LILIRSEKAAGI*CSYDGPDPFLS
Trigger: GCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
3UTR-3UTR CAA 90 bp GAAAAGTTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGCAGACTCCTTTCAAATaGGAACAGGAGCCAAACCAA +
Preference number: 3 (lower is better)
Translates to: EKLLSSPGQTLRCLDKVQQTPFK*EQEPNQ
Trigger: TTGGTTTGGCTCCTGTTCCAATTTGAAAGGAGTCTG...CTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAACTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
3UTR-3UTR CAA 90 bp GACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGCAGACTCCTTTCAAATaGGAACAGGAGCCAAACCAA +
Preference number: 3 (lower is better)
Translates to: DNHIVLILIRSEKAAGIWQTPFK*EQEPNQ
Trigger: TTGGTTTGGCTCCTGTTCCAATTTGAAAGGAGTCTG...CCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
3UTR-3UTR CAA 90 bp AACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCCAGACTCCTTTCAAATaGGAACAGGAGCCAAACCAA +
Preference number: 3 (lower is better)
Translates to: NHIVLILIRSEKAAGIWCQTPFK*EQEPNQ
Trigger: TTGGTTTGGCTCCTGTTCCAATTTGAAAGGAGTCTG...GCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
3UTR TCA 72 bp CCAATTTCTGGGAAATTGAGAGGAGAAACAGTATTATaGACACAGACTCCTTTCAAATTGGAACAGGAGCCA +
Preference number: 3 (lower is better)
Translates to: PISGKLRGETVL*TQTPFKLEQEP
Trigger: TGGCTCCTGTTCCAATTTGAAAGGAGTCTGTGTTCATAATACTGTTTCTCCTCTCAATTTCCCAGAAATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
3UTR GCA 72 bp GGCAGGGTAAAAGTTACTTACCACTCAGTACCTCTGTaGCAGAAGAAAAGCTCAATTTATTCAATCCTTAGA +
Preference number: 3 (lower is better)
Translates to: GRVKVTYHSVPL*QKKSSIYSILR
Trigger: TCTAAGGATTGAATAAATTGAGCTTTTCTTCTGGCACAGAGGTACTGAGTGGTAAGTAACTTTTACCCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
3UTR-3UTR CAA 90 bp GTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAACCAATTTCTGGGAAATaGAGAGGAGAAACAGTATTA +
Preference number: 3 (lower is better)
Translates to: VLIRSRDNHIVLILIRSEPISGK*RGETVL
Trigger: TAATACTGTTTCTCCTCTCAATTTCCCAGAAATTGG...TTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR GCA 90 bp TTTCTCCTCAGCACTGGTGGTAAGAAAGCCCCTTGCTCTCTAGTAGCCAGGCAGCCAGGGCATGATTGCTaGCAGTCCCCGCCGCGCCTG +
Preference number: 4 (lower is better)
Translates to: FLLSTGGKKAPCSLVARQPGHDC*QSPPRL
Trigger: CAGGCGCGGCGGGGACTGGCAGCAATCATGCCCTGG...CTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACCACCAGTGCTGAGGAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433805.6
CDS-3UTR CCA 90 bp ATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACCATTGGTCGCGGCGGTaGCAGAGGGCCTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: IWCSYDGPDPFLSTSHFHHWSRR*QRAWGR
Trigger: CCGCCCCCAGGCCCTCTGCCACCGCCGCGACCAATG...GTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308197.10
CDS-3UTR CCA 90 bp GGTGGTAAGAAAGCCCCTTGCTCTCTAGTAGCCAGGCAGCATGGACTTACAGTCGCAAGAGGCAGCGGCTaGGCTGGTTCGGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: GGKKAPCSLVARQHGLTVARGSG*AGSGPL
Trigger: CAGAGGTCCCGAACCAGCCCAGCCGCTGCCTCTTGC...GACTGTAAGTCCATGCTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308197.10
CDS-3UTR GCA 90 bp CGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCACCAAACTTGGTGGCTaGCCGACGCTCAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RSEKAAGIWCSYDGPDPFTKLGG*PTLKGS
Trigger: GCTGCCTTTGAGCGTCGGGCAGCCACCAAGTTTGGT...GAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR GCA 90 bp TACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACATCCTTTGCCTTCTCCCAGGGCATGATTaGTGCCAGTCCCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: YDGPDPFLSTSHFHILCLLPGHD*CQSPPR
Trigger: GCGCGGCGGGGACTGGCAGCAATCATGCCCTGGGAG...AAGGCAAAGGATGTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433805.6
CDS-3UTR CCA 90 bp GTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCCTGGACCAAACTTGGTaGCTGCCCGACGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: VVKRLQAYGAPTMGLTLSLDQTW*LPDAQR
Trigger: CCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAG...GGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR TCA 90 bp CTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGGTTGCGCGCCCGGGCTaGGCGAGAGCCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LRCLDKVQRQPHSPYSNSVARPG*ARAGSS
Trigger: GCTGCTGCCGGCTCTCGCTCAGCCCGGGCGCGCAAC...CGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308197.10
CDS-3UTR GCA 90 bp TTTCTCCTCAGCACTGGTGGTAAGAAAGCCCCTTGCTCTCTAGTAGCCAGGCAGGCTGCAGGCATATGGTaGTCCTACGATGGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: FLLSTGGKKAPCSLVARQAAGIW*SYDGPD
Trigger: GTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGC...CTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACCACCAGTGCTGAGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp GGTGGTAAGAAAGCCCCTTGCTCTCTAGTAGCCAGGCAGCATGGACTTACAGTCGCTGCAGGCATATGGTaGTCCTACGATGGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: GGKKAPCSLVARQHGLTVAAGIW*SYDGPD
Trigger: GTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGC...GACTGTAAGTCCATGCTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp TTTCTCCTCAGCACTGGTGGTAAGAAAGCCCCTTGCTCTCTAGTAGCCAGGCAGCTGGACCAAACTTGGTaGCTGCCCGACGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: FLLSTGGKKAPCSLVARQLDQTW*LPDAQR
Trigger: CCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAG...CTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACCACCAGTGCTGAGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp GTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCGTCTGGTGCACCTCATaGAACATCAGTTCACGGGGG +
Preference number: 4 (lower is better)
Translates to: VVKRLQAYGAPTMGLTLSVWCTS*NISSRG
Trigger: CCCCCGTGAACTGATGTTCCATGAGGTGCACCAGAC...GGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp CGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCGTCTGGTGCACCTCATaGAACATCAGTTCACGGGGG +
Preference number: 4 (lower is better)
Translates to: RSEKAAGIWCSYDGPDPFVWCTS*NISSRG
Trigger: CCCCCGTGAACTGATGTTCCATGAGGTGCACCAGAC...GAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR TCA 90 bp CGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCCTTTCGCTTGTTGGTaGAGGGAGCAGCAAATCCCA +
Preference number: 4 (lower is better)
Translates to: RSEKAAGIWCSYDGPDPFPFACW*REQQIP
Trigger: TGGGATTTGCTGCTCCCTTCACCAACAAGCGAAAGG...GAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR GCA 90 bp GTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCGTGGCCAGCTGGGAGTaGAGCAGAGAACGAAATTCA +
Preference number: 4 (lower is better)
Translates to: VVKRLQAYGAPTMGLTLSVASWE*SRERNS
Trigger: TGAATTTCGTTCTCTGCTGCACTCCCAGCTGGCCAC...GGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR GCA 90 bp AGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTACAGGGAGCAATCCCTTaGCTCAAGTCTGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: SEKAAGIWCSYDGPDPFLQGAIP*LKSGAP
Trigger: AGGTGCACCAGACTTGAGGCAAGGGATTGCTCCCTG...TAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CCA 90 bp CTGAGGAATCTCAGGCAGGGTAAAAGTTACTTACCACTCAGTACCTCTGTGCCATCAGCCGCCAAGATCTaGGCAGCCCGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LRNLRQGKSYLPLSTSVPSAAKI*AARGKR
Trigger: CCTCTTGCCTCGGGCTGCCCAGATCTTGGCGGCTGA...TGGCACAGAGGTACTGAGTGGTAAGTAACTTTTACCCTGCCTGAGATTCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp TTTCTCCTCAGCACTGGTGGTAAGAAAGCCCCTTGCTCTCTAGTAGCCAGGCAGGGGGATGGCTGTTTCTaGACCAAACTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FLLSTGGKKAPCSLVARQGDGCF*TKLGGC
Trigger: GCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCC...CTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACCACCAGTGCTGAGGAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp TTTCTCCTCAGCACTGGTGGTAAGAAAGCCCCTTGCTCTCTAGTAGCCAGGCAGAAGGCTGCAGGCATATaGTGCTCCTACGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLLSTGGKKAPCSLVARQKAAGI*CSYDGP
Trigger: AGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTT...CTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACCACCAGTGCTGAGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR TCA 90 bp AGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATACTGGTTCGGGACCTCTaGGCGCAGGGGCGACGGGAG +
Preference number: 4 (lower is better)
Translates to: RDNHIVLILIRSEKAAGILVRDL*AQGRRE
Trigger: CTCCCGTCGCCCCTGCGCTCAGAGGTCCCGAACCAG...TATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308197.10
CDS-3UTR TCA 90 bp AGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTAGAGCAGCAAATCCCATaGAGGAACGGCTCGAAGGTA +
Preference number: 4 (lower is better)
Translates to: SEKAAGIWCSYDGPDPFLEQQIP*RNGSKV
Trigger: TACCTTCGAGCCGTTCCTTCATGGGATTTGCTGCTC...TAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR TCA 90 bp TTTCTCCTCAGCACTGGTGGTAAGAAAGCCCCTTGCTCTCTAGTAGCCAGGCAGAGCTGGGCTTTCAAATaGCCCTTACGGCTGGATACC +
Preference number: 4 (lower is better)
Translates to: FLLSTGGKKAPCSLVARQSWAFK*PLRLDT
Trigger: GGTATCCAGCCGTAAGGGTCATTTGAAAGCCCAGCT...CTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACCACCAGTGCTGAGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR TCA 90 bp CTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGTTAGCTCCCAGGGCATaGTTGCTGCCAGTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LILIRSEKAAGIWCSYDGLAPRA*LLPVPA
Trigger: GGCGGGGACTGGCAGCAATCATGCCCTGGGAGCTAA...CCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433805.6
CDS-3UTR GCA 90 bp TCCTTAGAAAAGTTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGCAGCACCTCTCGCCTTaGTCCCGTCCAGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: SLEKLLSSPGQTLRCLDKQHLSP*SRPGCR
Trigger: CCGGCAGCCTGGACGGGAGCAAGGCGAGAGGTGCTG...CTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAACTTTTCTAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308197.10
CDS-3UTR GCA 90 bp GGTGGTAAGAAAGCCCCTTGCTCTCTAGTAGCCAGGCAGCATGGACTTACAGTCGTGGCCAGCTGGGAGTaGAGCAGAGAACGAAATTCA +
Preference number: 4 (lower is better)
Translates to: GGKKAPCSLVARQHGLTVVASWE*SRERNS
Trigger: TGAATTTCGTTCTCTGCTGCACTCCCAGCTGGCCAC...GACTGTAAGTCCATGCTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp TGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACATCCTTACCAAACTTGGTGGCTaGCCGACGCTCAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: CSYDGPDPFLSTSHFHILTKLGG*PTLKGS
Trigger: GCTGCCTTTGAGCGTCGGGCAGCCACCAAGTTTGGT...AAGGATGTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR GCA 90 bp TCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATGCTGCAGGCATATGGTaGTCCTACGATGGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: SSPGQTLRCLDKVQRQPHAAGIW*SYDGPD
Trigger: GTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGC...ATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR GCA 90 bp TGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACATCCTTGCTGCAGGCATATGGTaGTCCTACGATGGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: CSYDGPDPFLSTSHFHILAAGIW*SYDGPD
Trigger: GTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGC...AAGGATGTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp TTAGAAAAGTTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCAGGCAGCGGCTGGGCTaGTTCGGGACCTCTGAGCGC +
Preference number: 4 (lower is better)
Translates to: LEKLLSSPGQTLRCLDKVRQRLG*FGTSER
Trigger: GCGCTCAGAGGTCCCGAACCAGCCCAGCCGCTGCCT...GACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAACTTTTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308197.10
CDS-3UTR TCA 90 bp AGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCATGGCCCTCTAAGTTCTaGCGCGGGCTGCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RSRDNHIVLILIRSEKAAWPSKF*RGLRPP
Trigger: AGGAGGGCGCAGCCCGCGTCAGAACTTAGAGGGCCA...TGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308197.10
CDS-3UTR GCA 90 bp AGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTATCGAAAAGTCCACAGTaGAGGTTCGAGGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: SEKAAGIWCSYDGPDPFLSKSPQ*RFEDRQ
Trigger: CTGCCTATCCTCGAACCTGCACTGTGGACTTTTCGA...TAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR GCA 90 bp TACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACATCCTTTGCCTTACCAAACTTGGTGGCTaGCCGACGCTCAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: YDGPDPFLSTSHFHILCLTKLGG*PTLKGS
Trigger: GCTGCCTTTGAGCGTCGGGCAGCCACCAAGTTTGGT...AAGGCAAAGGATGTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR GCA 90 bp CTGAGGAATCTCAGGCAGGGTAAAAGTTACTTACCACTCAGTACCTCTGTGCCAACCAAACTTGGTGGCTaGCCGACGCTCAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LRNLRQGKSYLPLSTSVPTKLGG*PTLKGS
Trigger: GCTGCCTTTGAGCGTCGGGCAGCCACCAAGTTTGGT...TGGCACAGAGGTACTGAGTGGTAAGTAACTTTTACCCTGCCTGAGATTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp CGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCGATACTCCTGGACGTTaGACACCACCTCATACATCT +
Preference number: 4 (lower is better)
Translates to: RSEKAAGIWCSYDGPDPFDTPGR*TPPHTS
Trigger: AGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATC...GAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CCA 90 bp TTTCTCCTCAGCACTGGTGGTAAGAAAGCCCCTTGCTCTCTAGTAGCCAGGCAGAACTCACGATACTCCTaGACGTTGGACACCACCTCA +
Preference number: 4 (lower is better)
Translates to: FLLSTGGKKAPCSLVARQNSRYS*TLDTTS
Trigger: TGAGGTGGTGTCCAACGTCCAGGAGTATCGTGAGTT...CTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACCACCAGTGCTGAGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp CGTTTCCGTTCAGTACTTTTCTCCTCAGCACTGGTGGTAAGAAAGCCCCTTGCTAACATGGTGGCCAGCTaGGAGTGCAGCAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: RFRSVLFSSALVVRKPLANMVAS*ECSRER
Trigger: TCGTTCTCTGCTGCACTCCCAGCTGGCCACCATGTT...AGCAAGGGGCTTTCTTACCACCAGTGCTGAGGAGAAAAGTACTGAACGGAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp GCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTGTTACTATCGTCCCCTaGTCAGACACTAAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: AAGIWCSYDGPDPFLSTSVTIVP*SDTKVS
Trigger: AGACACCTTAGTGTCTGACCAGGGGACGATAGTAAC...AGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
CDS-3UTR TCA 90 bp ATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACAGCTGGGCTTTCAAATaGCCCTTACGGCTGGATACC +
Preference number: 4 (lower is better)
Translates to: IWCSYDGPDPFLSTSHFHSWAFK*PLRLDT
Trigger: GGTATCCAGCCGTAAGGGTCATTTGAAAGCCCAGCT...GTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR TCA 90 bp GGTGGTAAGAAAGCCCCTTGCTCTCTAGTAGCCAGGCAGCATGGACTTACAGTCACAGCCTTGACCATGTaGGGTTTGACCATGGAAACT +
Preference number: 4 (lower is better)
Translates to: GGKKAPCSLVARQHGLTVTALTM*GLTMET
Trigger: AGTTTCCATGGTCAAACCTCACATGGTCAAGGCTGT...GACTGTAAGTCCATGCTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp TCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATGTGGCCAGCTGGGAGTaGAGCAGAGAACGAAATTCA +
Preference number: 4 (lower is better)
Translates to: SSPGQTLRCLDKVQRQPHVASWE*SRERNS
Trigger: TGAATTTCGTTCTCTGCTGCACTCCCAGCTGGCCAC...ATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR GCA 90 bp TGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACATCCTTGGTAAGAAAGCCCCTTaGTCTCTAGTAGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CSYDGPDPFLSTSHFHILGKKAP*SLVARQ
Trigger: CTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACC...AAGGATGTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp AGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTAAATGACCCTTACGGCTaGATACCACCAGAGACTTCT +
Preference number: 4 (lower is better)
Translates to: SEKAAGIWCSYDGPDPFLNDPYG*IPPETS
Trigger: AGAAGTCTCTGGTGGTATCCAGCCGTAAGGGTCATT...TAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp ATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACCCCTTGCCTCAAGTCTaGTGCACCTCATGGAACATC +
Preference number: 4 (lower is better)
Translates to: IWCSYDGPDPFLSTSHFHPLPQV*CTSWNI
Trigger: GATGTTCCATGAGGTGCACCAGACTTGAGGCAAGGG...GTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CCA 90 bp GGTGGTAAGAAAGCCCCTTGCTCTCTAGTAGCCAGGCAGCATGGACTTACAGTCGTTACTATCGTCCCCTaGTCAGACACTAAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: GGKKAPCSLVARQHGLTVVTIVP*SDTKVS
Trigger: AGACACCTTAGTGTCTGACCAGGGGACGATAGTAAC...GACTGTAAGTCCATGCTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp AGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTAGTTACTATCGTCCCCTaGTCAGACACTAAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SEKAAGIWCSYDGPDPFLVTIVP*SDTKVS
Trigger: AGACACCTTAGTGTCTGACCAGGGGACGATAGTAAC...TAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
CDS-3UTR GCA 90 bp AACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCAGTTCTGACGCGGGCTaGGCCCTCCTCACTCCAAAG +
Preference number: 4 (lower is better)
Translates to: NHIVLILIRSEKAAGIWCSSDAG*ALLTPK
Trigger: CTTTGGAGTGAGGAGGGCGCAGCCCGCGTCAGAACT...GCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308197.10
CDS-3UTR GCA 90 bp TGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACATCCTTGAAGGAGAAGAAGAGTaGATCCCAGACGAAGGTCGT +
Preference number: 4 (lower is better)
Translates to: CSYDGPDPFLSTSHFHILEGEEE*IPDEGR
Trigger: ACGACCTTCGTCTGGGATGCACTCTTCTTCTCCTTC...AAGGATGTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546544.5
CDS-3UTR CCA 90 bp AACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCGGTCAGAAACCTCATTaGTCGCGGCGGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: NHIVLILIRSEKAAGIWCGQKPH*SRRWQR
Trigger: CCTCTGCCACCGCCGCGACCAATGAGGTTTCTGACC...GCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308197.10
CDS-3UTR CCA 90 bp GAAAAGTTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGAACATGGTGGCCAGCTaGGAGTGCAGCAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: EKLLSSPGQTLRCLDKVQNMVAS*ECSRER
Trigger: TCGTTCTCTGCTGCACTCCCAGCTGGCCACCATGTT...CTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
CDS-3UTR CCA 90 bp TTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAAAACATGGTGGCCAGCTaGGAGTGCAGCAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: LLSSPGQTLRCLDKVQRQNMVAS*ECSRER
Trigger: TCGTTCTCTGCTGCACTCCCAGCTGGCCACCATGTT...TTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
CDS-3UTR CCA 90 bp CTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGAAGGCTGCAGGCATATaGTGCTCCTACGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: LILIRSEKAAGIWCSYDGKAAGI*CSYDGP
Trigger: AGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTT...CCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp GCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTTTATGTATTTCAGGCTaGAGGCAGGTTGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: AAGIWCSYDGPDPFLSTSLCISG*RQVAFS
Trigger: AGAAAAGGCAACCTGCCTCCAGCCTGAAATACATAA...AGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp CGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCAGTAGCCAGGCAGCATaGACTTACAGTCTTAAAATG +
Preference number: 4 (lower is better)
Translates to: RSEKAAGIWCSYDGPDPFSSQAA*TYSLKM
Trigger: CATTTTAAGACTGTAAGTCCATGCTGCCTGGCTACT...GAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp GCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTAGTAGCCAGGCAGCATaGACTTACAGTCTTAAAATG +
Preference number: 4 (lower is better)
Translates to: AAGIWCSYDGPDPFLSTSSSQAA*TYSLKM
Trigger: CATTTTAAGACTGTAAGTCCATGCTGCCTGGCTACT...AGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp ATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACAAACAGCGATACTCCTaGACGTTGGACACCACCTCA +
Preference number: 4 (lower is better)
Translates to: IWCSYDGPDPFLSTSHFHKQRYS*TLDTTS
Trigger: TGAGGTGGTGTCCAACGTCCAGGAGTATCGCTGTTT...GTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553234.1
CDS-3UTR TCA 90 bp CAAAGACAACTCCGTTTCCGTTCAGTACTTTTCTCCTCAGCACTGGTGGTAAGACCTTTCGCTTGTTGGTaGAGGGAGCAGCAAATCCCA +
Preference number: 4 (lower is better)
Translates to: QRQLRFRSVLFSSALVVRPFACW*REQQIP
Trigger: TGGGATTTGCTGCTCCCTTCACCAACAAGCGAAAGG...TCTTACCACCAGTGCTGAGGAGAAAAGTACTGAACGGAAACGGAGTTGTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR TCA 90 bp CTGAGGAATCTCAGGCAGGGTAAAAGTTACTTACCACTCAGTACCTCTGTGCCAGCATTGAGTACCCCATaGTTCTACGCTCCGAGTAAG +
Preference number: 4 (lower is better)
Translates to: LRNLRQGKSYLPLSTSVPALSTP*FYAPSK
Trigger: CTTACTCGGAGCGTAGAATCATGGGGTACTCAATGC...TGGCACAGAGGTACTGAGTGGTAAGTAACTTTTACCCTGCCTGAGATTCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp AGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTATTTGACCATGGAAACTaGAGAGGTGTAACGTTCCAT +
Preference number: 4 (lower is better)
Translates to: SEKAAGIWCSYDGPDPFLFDHGN*RGVTFH
Trigger: ATGGAACGTTACACCTCTGCAGTTTCCATGGTCAAA...TAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp CTGAGGAATCTCAGGCAGGGTAAAAGTTACTTACCACTCAGTACCTCTGTGCCATCGAAAAGTCCACAGTaGAGGTTCGAGGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: LRNLRQGKSYLPLSTSVPSKSPQ*RFEDRQ
Trigger: CTGCCTATCCTCGAACCTGCACTGTGGACTTTTCGA...TGGCACAGAGGTACTGAGTGGTAAGTAACTTTTACCCTGCCTGAGATTCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp GCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCCTTCTCGTACAACTTaGAAAAGCATTATCCAAAGC +
Preference number: 4 (lower is better)
Translates to: AAGIWCSYDGPDPFLSTSPSRTT*KSIIQS
Trigger: GCTTTGGATAATGCTTTTGCAAGTTGTACGAGAAGG...AGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433805.6
CDS-3UTR CCA 90 bp TGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACATCCTTAATGACCCTTACGGCTaGATACCACCAGAGACTTCT +
Preference number: 4 (lower is better)
Translates to: CSYDGPDPFLSTSHFHILNDPYG*IPPETS
Trigger: AGAAGTCTCTGGTGGTATCCAGCCGTAAGGGTCATT...AAGGATGTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp TCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAATGACCCTTACGGCTaGATACCACCAGAGACTTCT +
Preference number: 4 (lower is better)
Translates to: SSPGQTLRCLDKVQRQPHNDPYG*IPPETS
Trigger: AGAAGTCTCTGGTGGTATCCAGCCGTAAGGGTCATT...ATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp GACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGCTGGACCAAACTTGGTaGCTGCCCGACGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: DNHIVLILIRSEKAAGIWLDQTW*LPDAQR
Trigger: CCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAG...CCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp CAAAGACAACTCCGTTTCCGTTCAGTACTTTTCTCCTCAGCACTGGTGGTAAGATTTCTGGACCAAACTTaGTGGCTGCCCGACGCTCAA +
Preference number: 4 (lower is better)
Translates to: QRQLRFRSVLFSSALVVRFLDQT*WLPDAQ
Trigger: TTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAA...TCTTACCACCAGTGCTGAGGAGAAAAGTACTGAACGGAAACGGAGTTGTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp CTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGTTTCTGGACCAAACTTaGTGGCTGCCCGACGCTCAA +
Preference number: 4 (lower is better)
Translates to: LILIRSEKAAGIWCSYDGFLDQT*WLPDAQ
Trigger: TTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAA...CCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp TTTCTCCTGAGGAATCTCAGGCAGGGTAAAAGTTACTTACCACTCAGTACCTCTGGGGATGGCTGTTTCTaGACCAAACTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FLLRNLRQGKSYLPLSTSGDGCF*TKLGGC
Trigger: GCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCC...AGAGGTACTGAGTGGTAAGTAACTTTTACCCTGCCTGAGATTCCTCAGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp TACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACATCCTTTGCCTTTCAGTTCACGGGGGATaGCTGTTTCTGGACCAAACT +
Preference number: 4 (lower is better)
Translates to: YDGPDPFLSTSHFHILCLSVHGG*LFLDQT
Trigger: AGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTGA...AAGGCAAAGGATGTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp TTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCCTTGCCTCAAGTCTaGTGCACCTCATGGAACATC +
Preference number: 4 (lower is better)
Translates to: LLSSPGQTLRCLDKVQRQPLPQV*CTSWNI
Trigger: GATGTTCCATGAGGTGCACCAGACTTGAGGCAAGGG...TTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp TCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATGTTACTATCGTCCCCTaGTCAGACACTAAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SSPGQTLRCLDKVQRQPHVTIVP*SDTKVS
Trigger: AGACACCTTAGTGTCTGACCAGGGGACGATAGTAAC...ATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
CDS-3UTR GCA 90 bp AGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATAACCAAACTTGGTGGCTaGCCGACGCTCAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RDNHIVLILIRSEKAAGITKLGG*PTLKGS
Trigger: GCTGCCTTTGAGCGTCGGGCAGCCACCAAGTTTGGT...TATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR GCA 90 bp AACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCCAGGGAGCAATCCCTTaGCTCAAGTCTGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: NHIVLILIRSEKAAGIWCQGAIP*LKSGAP
Trigger: AGGTGCACCAGACTTGAGGCAAGGGATTGCTCCCTG...GCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR GCA 90 bp CTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGGCTGCAGGCATATGGTaGTCCTACGATGGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LRCLDKVQRQPHSPYSNSAAGIW*SYDGPD
Trigger: GTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGC...CGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp CAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAACATGGTGGCCAGCTaGGAGTGCAGCAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: QTLRCLDKVQRQPHSPYSNMVAS*ECSRER
Trigger: TCGTTCTCTGCTGCACTCCCAGCTGGCCACCATGTT...AGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp AACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCGGGGATGGCTGTTTCTaGACCAAACTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NHIVLILIRSEKAAGIWCGDGCF*TKLGGC
Trigger: GCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCC...GCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp CAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTGGGGATGGCTGTTTCTaGACCAAACTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QTLRCLDKVQRQPHSPYSGDGCF*TKLGGC
Trigger: GCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCC...AGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp CAAAGACAACTCCGTTTCCGTTCAGTACTTTTCTCCTCAGCACTGGTGGTAAGATCAGTTCACGGGGGATaGCTGTTTCTGGACCAAACT +
Preference number: 4 (lower is better)
Translates to: QRQLRFRSVLFSSALVVRSVHGG*LFLDQT
Trigger: AGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTGA...TCTTACCACCAGTGCTGAGGAGAAAAGTACTGAACGGAAACGGAGTTGTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp AGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGTCTGGTGCACCTCATaGAACATCAGTTCACGGGGG +
Preference number: 4 (lower is better)
Translates to: RSRDNHIVLILIRSEKAAVWCTS*NISSRG
Trigger: CCCCCGTGAACTGATGTTCCATGAGGTGCACCAGAC...TGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp TTAGAAAAGTTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCAAGGCTGCAGGCATATaGTGCTCCTACGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: LEKLLSSPGQTLRCLDKVKAAGI*CSYDGP
Trigger: AGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTT...GACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAACTTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
CDS-3UTR TCA 90 bp AACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCCCTTTCGCTTGTTGGTaGAGGGAGCAGCAAATCCCA +
Preference number: 4 (lower is better)
Translates to: NHIVLILIRSEKAAGIWCPFACW*REQQIP
Trigger: TGGGATTTGCTGCTCCCTTCACCAACAAGCGAAAGG...GCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR TCA 90 bp TTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAAACAGCCTTGACCATGTaGGGTTTGACCATGGAAACT +
Preference number: 4 (lower is better)
Translates to: LLSSPGQTLRCLDKVQRQTALTM*GLTMET
Trigger: AGTTTCCATGGTCAAACCTCACATGGTCAAGGCTGT...TTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp GACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGGTGGCCAGCTGGGAGTaGAGCAGAGAACGAAATTCA +
Preference number: 4 (lower is better)
Translates to: DNHIVLILIRSEKAAGIWVASWE*SRERNS
Trigger: TGAATTTCGTTCTCTGCTGCACTCCCAGCTGGCCAC...CCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR GCA 90 bp TTGCTCTCTAGTAGCCAGGCAGCATGGACTTACAGTCTTAAAATGAGGCTTTATGGTAAGAAAGCCCCTTaGTCTCTAGTAGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LLSSSQAAWTYSLKMRLYGKKAP*SLVARQ
Trigger: CTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACC...ATAAAGCCTCATTTTAAGACTGTAAGTCCATGCTGCCTGGCTACTAGAGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp CTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGGATACTCCTGGACGTTaGACACCACCTCATACATCT +
Preference number: 4 (lower is better)
Translates to: LILIRSEKAAGIWCSYDGDTPGR*TPPHTS
Trigger: AGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATC...CCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CCA 90 bp ACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATCTGGACCAAACTTGGTaGCTGCCCGACGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: TLRCLDKVQRQPHSPYSNLDQTW*LPDAQR
Trigger: CCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAG...ATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp GTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAACTGGACCAAACTTGGTaGCTGCCCGACGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: VLIRSRDNHIVLILIRSELDQTW*LPDAQR
Trigger: CCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAG...TTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp TTGCTCTCTAGTAGCCAGGCAGCATGGACTTACAGTCTTAAAATGAGGCTTTATTTTCTGGACCAAACTTaGTGGCTGCCCGACGCTCAA +
Preference number: 4 (lower is better)
Translates to: LLSSSQAAWTYSLKMRLYFLDQT*WLPDAQ
Trigger: TTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAA...ATAAAGCCTCATTTTAAGACTGTAAGTCCATGCTGCCTGGCTACTAGAGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp CAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTTTTCTGGACCAAACTTaGTGGCTGCCCGACGCTCAA +
Preference number: 4 (lower is better)
Translates to: QTLRCLDKVQRQPHSPYSFLDQT*WLPDAQ
Trigger: TTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAA...AGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp CTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGGGGGATGGCTGTTTCTaGACCAAACTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LRCLDKVQRQPHSPYSNSGDGCF*TKLGGC
Trigger: GCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCC...CGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp AGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATAGTCTGGTGCACCTCATaGAACATCAGTTCACGGGGG +
Preference number: 4 (lower is better)
Translates to: RDNHIVLILIRSEKAAGIVWCTS*NISSRG
Trigger: CCCCCGTGAACTGATGTTCCATGAGGTGCACCAGAC...TATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp AACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCCCCTTGCCTCAAGTCTaGTGCACCTCATGGAACATC +
Preference number: 4 (lower is better)
Translates to: NHIVLILIRSEKAAGIWCPLPQV*CTSWNI
Trigger: GATGTTCCATGAGGTGCACCAGACTTGAGGCAAGGG...GCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CCA 90 bp GACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGCCCTTGCCTCAAGTCTaGTGCACCTCATGGAACATC +
Preference number: 4 (lower is better)
Translates to: DNHIVLILIRSEKAAGIWPLPQV*CTSWNI
Trigger: GATGTTCCATGAGGTGCACCAGACTTGAGGCAAGGG...CCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CCA 90 bp TTTCTCCTCAGCACTGGTGGTAAGAAAGCCCCTTGCTCTCTAGTAGCCAGGCAGATAGAACCCAATTTCTaGGAAATTGAGAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: FLLSTGGKKAPCSLVARQIEPNF*EIERRN
Trigger: GTTTCTCCTCTCAATTTCCCAGAAATTGGGTTCTAT...CTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACCACCAGTGCTGAGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR TCA 90 bp AGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATAGAGCAGCAAATCCCATaGAGGAACGGCTCGAAGGTA +
Preference number: 4 (lower is better)
Translates to: RDNHIVLILIRSEKAAGIEQQIP*RNGSKV
Trigger: TACCTTCGAGCCGTTCCTTCATGGGATTTGCTGCTC...TATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR TCA 90 bp TTGCTCTCTAGTAGCCAGGCAGCATGGACTTACAGTCTTAAAATGAGGCTTTATGCATTGAGTACCCCATaGTTCTACGCTCCGAGTAAG +
Preference number: 4 (lower is better)
Translates to: LLSSSQAAWTYSLKMRLYALSTP*FYAPSK
Trigger: CTTACTCGGAGCGTAGAATCATGGGGTACTCAATGC...ATAAAGCCTCATTTTAAGACTGTAAGTCCATGCTGCCTGGCTACTAGAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR TCA 90 bp GACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGAGGTGTAACGTTCCATaGCAGGTGGAAAGCCAACCT +
Preference number: 4 (lower is better)
Translates to: DNHIVLILIRSEKAAGIWRCNVP*QVESQP
Trigger: AGGTTGGCTTTCCACCTGTCATGGAACGTTACACCT...CCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR TCA 90 bp TGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACATCCTTTCTATCATTTGTAGGTaGAGGAGAAGAAGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: CSYDGPDPFLSTSHFHILSIICR*RRRRVH
Trigger: ATGCACTCTTCTTCTCCTTCACCTACAAATGATAGA...AAGGATGTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546544.5
CDS-3UTR GCA 90 bp AGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCATCGAAAAGTCCACAGTaGAGGTTCGAGGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: RSRDNHIVLILIRSEKAASKSPQ*RFEDRQ
Trigger: CTGCCTATCCTCGAACCTGCACTGTGGACTTTTCGA...TGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR GCA 90 bp GTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAACAGGGAGCAATCCCTTaGCTCAAGTCTGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: VLIRSRDNHIVLILIRSEQGAIP*LKSGAP
Trigger: AGGTGCACCAGACTTGAGGCAAGGGATTGCTCCCTG...TTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR GCA 90 bp ATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTCACTCAGTACCTCTGTaGCAGAAGAAAAGCTCAATT +
Preference number: 4 (lower is better)
Translates to: ILIRSEKAAGIWCSYDGPHSVPL*QKKSSI
Trigger: AATTGAGCTTTTCTTCTGGCACAGAGGTACTGAGTG...AGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp CTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGGGTAAGAAAGCCCCTTaGTCTCTAGTAGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LRCLDKVQRQPHSPYSNSGKKAP*SLVARQ
Trigger: CTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACC...CGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp CGTTTCCGTTCAGTACTTTTCTCCTCAGCACTGGTGGTAAGAAAGCCCCTTGCTCAAATAGTCTCTAAGTaGTTGAAGAGCTTGCCATCA +
Preference number: 4 (lower is better)
Translates to: RFRSVLFSSALVVRKPLAQIVSK*LKSLPS
Trigger: TGATGGCAAGCTCTTCAACCACTTAGAGACTATTTG...AGCAAGGGGCTTTCTTACCACCAGTGCTGAGGAGAAAAGTACTGAACGGAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp CAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTTCAGTTCACGGGGGATaGCTGTTTCTGGACCAAACT +
Preference number: 4 (lower is better)
Translates to: QTLRCLDKVQRQPHSPYSSVHGG*LFLDQT
Trigger: AGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTGA...AGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp ACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATGTCTGGTGCACCTCATaGAACATCAGTTCACGGGGG +
Preference number: 4 (lower is better)
Translates to: TLRCLDKVQRQPHSPYSNVWCTS*NISSRG
Trigger: CCCCCGTGAACTGATGTTCCATGAGGTGCACCAGAC...ATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp ACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATAAGGCTGCAGGCATATaGTGCTCCTACGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: TLRCLDKVQRQPHSPYSNKAAGI*CSYDGP
Trigger: AGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTT...ATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp TCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAAAACTCAGGCCAAGTaGAAGAATAAGGTACAACTC +
Preference number: 4 (lower is better)
Translates to: SSPGQTLRCLDKVQRQPHKTQAK*KNKVQL
Trigger: GAGTTGTACCTTATTCTTCCACTTGGCCTGAGTTTT...ATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
3UTR CAA 72 bp AAAATGAGGCTTTATGTATTTCAGGCTGGAGGCAGGTaGCCTTTTCTCCTGAGGAATCTCAGGCAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: KMRLYVFQAGGR*PFLLRNLRQGK
Trigger: TTTACCCTGCCTGAGATTCCTCAGGAGAAAAGGCAACCTGCCTCCAGCCTGAAATACATAAAGCCTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR TCA 90 bp AGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATAGCATTGAGTACCCCATaGTTCTACGCTCCGAGTAAG +
Preference number: 4 (lower is better)
Translates to: RDNHIVLILIRSEKAAGIALSTP*FYAPSK
Trigger: CTTACTCGGAGCGTAGAATCATGGGGTACTCAATGC...TATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR TCA 90 bp ACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATAGCTGGGCTTTCAAATaGCCCTTACGGCTGGATACC +
Preference number: 4 (lower is better)
Translates to: TLRCLDKVQRQPHSPYSNSWAFK*PLRLDT
Trigger: GGTATCCAGCCGTAAGGGTCATTTGAAAGCCCAGCT...ATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR TCA 90 bp TCCTTAGAAAAGTTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGACAGCCTTGACCATGTaGGGTTTGACCATGGAAACT +
Preference number: 4 (lower is better)
Translates to: SLEKLLSSPGQTLRCLDKTALTM*GLTMET
Trigger: AGTTTCCATGGTCAAACCTCACATGGTCAAGGCTGT...CTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAACTTTTCTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp GTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAGTGGCCAGCTGGGAGTaGAGCAGAGAACGAAATTCA +
Preference number: 4 (lower is better)
Translates to: VLIRSRDNHIVLILIRSEVASWE*SRERNS
Trigger: TGAATTTCGTTCTCTGCTGCACTCCCAGCTGGCCAC...TTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR GCA 90 bp AGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCATTGCCTCAAGTCTGGTaGACCTCATGGAACATCAGT +
Preference number: 4 (lower is better)
Translates to: RSRDNHIVLILIRSEKAALPQVW*TSWNIS
Trigger: ACTGATGTTCCATGAGGTGCACCAGACTTGAGGCAA...TGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR GCA 90 bp CAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTTTGCCTCAAGTCTGGTaGACCTCATGGAACATCAGT +
Preference number: 4 (lower is better)
Translates to: QTLRCLDKVQRQPHSPYSLPQVW*TSWNIS
Trigger: ACTGATGTTCCATGAGGTGCACCAGACTTGAGGCAA...AGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR GCA 90 bp TTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACACTCAGTACCTCTGTaGCAGAAGAAAAGCTCAATT +
Preference number: 4 (lower is better)
Translates to: LLSSPGQTLRCLDKVQRQHSVPL*QKKSSI
Trigger: AATTGAGCTTTTCTTCTGGCACAGAGGTACTGAGTG...TTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp GACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGGATACTCCTGGACGTTaGACACCACCTCATACATCT +
Preference number: 4 (lower is better)
Translates to: DNHIVLILIRSEKAAGIWDTPGR*TPPHTS
Trigger: AGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATC...CCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CCA 90 bp AGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATAAACTCACGATACTCCTaGACGTTGGACACCACCTCA +
Preference number: 4 (lower is better)
Translates to: RDNHIVLILIRSEKAAGINSRYS*TLDTTS
Trigger: TGAGGTGGTGTCCAACGTCCAGGAGTATCGTGAGTT...TATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp ACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTTTCTGGACCAAACTTaGTGGCTGCCCGACGCTCAA +
Preference number: 4 (lower is better)
Translates to: TLRCLDKVQRQPHSPYSNFLDQT*WLPDAQ
Trigger: TTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAA...ATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp CTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTCAGTTCACGGGGGATaGCTGTTTCTGGACCAAACT +
Preference number: 4 (lower is better)
Translates to: LRCLDKVQRQPHSPYSNSSVHGG*LFLDQT
Trigger: AGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTGA...CGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp TGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACATCCTTATAGAACCCAATTTCTaGGAAATTGAGAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: CSYDGPDPFLSTSHFHILIEPNF*EIERRN
Trigger: GTTTCTCCTCTCAATTTCCCAGAAATTGGGTTCTAT...AAGGATGTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CCA 90 bp AGGTTGCCTTTTCTCCTGAGGAATCTCAGGCAGGGTAAAAGTTACTTACCACTCAGTAGCCAGGCAGCATaGACTTACAGTCTTAAAATG +
Preference number: 4 (lower is better)
Translates to: RLPFLLRNLRQGKSYLPLSSQAA*TYSLKM
Trigger: CATTTTAAGACTGTAAGTCCATGCTGCCTGGCTACT...GAGTGGTAAGTAACTTTTACCCTGCCTGAGATTCCTCAGGAGAAAAGGCAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp TACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACATCCTTTGCCTTAAAACTCAGGCCAAGTaGAAGAATAAGGTACAACTC +
Preference number: 4 (lower is better)
Translates to: YDGPDPFLSTSHFHILCLKTQAK*KNKVQL
Trigger: GAGTTGTACCTTATTCTTCCACTTGGCCTGAGTTTT...AAGGCAAAGGATGTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR TCA 90 bp ACTCAGTACCTCTGTGCCAGAAGAAAAGCTCAATTTATTCAATCCTTAGAAAAGCCTTTCGCTTGTTGGTaGAGGGAGCAGCAAATCCCA +
Preference number: 4 (lower is better)
Translates to: TQYLCARRKAQFIQSLEKPFACW*REQQIP
Trigger: TGGGATTTGCTGCTCCCTTCACCAACAAGCGAAAGG...CTTTTCTAAGGATTGAATAAATTGAGCTTTTCTTCTGGCACAGAGGTACTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR TCA 90 bp GTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAGCATTGAGTACCCCATaGTTCTACGCTCCGAGTAAG +
Preference number: 4 (lower is better)
Translates to: VLIRSRDNHIVLILIRSEALSTP*FYAPSK
Trigger: CTTACTCGGAGCGTAGAATCATGGGGTACTCAATGC...TTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR TCA 90 bp GTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAGGTGTAACGTTCCATaGCAGGTGGAAAGCCAACCT +
Preference number: 4 (lower is better)
Translates to: VLIRSRDNHIVLILIRSERCNVP*QVESQP
Trigger: AGGTTGGCTTTCCACCTGTCATGGAACGTTACACCT...TTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp TTTCTCCTGAGGAATCTCAGGCAGGGTAAAAGTTACTTACCACTCAGTACCTCTTTTGACCATGGAAACTaGAGAGGTGTAACGTTCCAT +
Preference number: 4 (lower is better)
Translates to: FLLRNLRQGKSYLPLSTSFDHGN*RGVTFH
Trigger: ATGGAACGTTACACCTCTGCAGTTTCCATGGTCAAA...AGAGGTACTGAGTGGTAAGTAACTTTTACCCTGCCTGAGATTCCTCAGGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp ACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGAAAAGTCCACAGTaGAGGTTCGAGGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: TLRCLDKVQRQPHSPYSNSKSPQ*RFEDRQ
Trigger: CTGCCTATCCTCGAACCTGCACTGTGGACTTTTCGA...ATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR GCA 90 bp CTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTTGCCTCAAGTCTGGTaGACCTCATGGAACATCAGT +
Preference number: 4 (lower is better)
Translates to: LRCLDKVQRQPHSPYSNSLPQVW*TSWNIS
Trigger: ACTGATGTTCCATGAGGTGCACCAGACTTGAGGCAA...CGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CCA 90 bp CAAAGACAACTCCGTTTCCGTTCAGTACTTTTCTCCTCAGCACTGGTGGTAAGACAAATAGTCTCTAAGTaGTTGAAGAGCTTGCCATCA +
Preference number: 4 (lower is better)
Translates to: QRQLRFRSVLFSSALVVRQIVSK*LKSLPS
Trigger: TGATGGCAAGCTCTTCAACCACTTAGAGACTATTTG...TCTTACCACCAGTGCTGAGGAGAAAAGTACTGAACGGAAACGGAGTTGTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp ACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCAGTTCACGGGGGATaGCTGTTTCTGGACCAAACT +
Preference number: 4 (lower is better)
Translates to: TLRCLDKVQRQPHSPYSNSVHGG*LFLDQT
Trigger: AGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTGA...ATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CCA 90 bp TTAGAAAAGTTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCCAATTTCTCAAGTCTaGTGCACCTCATGGAACATC +
Preference number: 4 (lower is better)
Translates to: LEKLLSSPGQTLRCLDKVPISQV*CTSWNI
Trigger: GATGTTCCATGAGGTGCACCAGACTTGAGAAATTGG...GACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAACTTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551814.1
CDS-3UTR TCA 90 bp ACTCAGTACCTCTGTGCCAGAAGAAAAGCTCAATTTATTCAATCCTTAGAAAAGAGGTGTAACGTTCCATaGCAGGTGGAAAGCCAACCT +
Preference number: 4 (lower is better)
Translates to: TQYLCARRKAQFIQSLEKRCNVP*QVESQP
Trigger: AGGTTGGCTTTCCACCTGTCATGGAACGTTACACCT...CTTTTCTAAGGATTGAATAAATTGAGCTTTTCTTCTGGCACAGAGGTACTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR TCA 90 bp GAAAAGTTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGGGAGAAACAGTATTATaGACACAGACTCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: EKLLSSPGQTLRCLDKVQGETVL*TQTPFK
Trigger: TTTGAAAGGAGTCTGTGTTCATAATACTGTTTCTCC...CTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAACTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp GACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGACCTCATACATCTCCTaGATTGAGTACCCCATGATT +
Preference number: 4 (lower is better)
Translates to: DNHIVLILIRSEKAAGIWTSYIS*IEYPMI
Trigger: AATCATGGGGTACTCAATGCAGGAGATGTATGAGGT...CCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR GCA 90 bp TTAGAAAAGTTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCACCTCATACATCTCCTaGATTGAGTACCCCATGATT +
Preference number: 4 (lower is better)
Translates to: LEKLLSSPGQTLRCLDKVTSYIS*IEYPMI
Trigger: AATCATGGGGTACTCAATGCAGGAGATGTATGAGGT...GACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAACTTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp TCCTTAGAAAAGTTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGACCTCATACATCTCCTaGATTGAGTACCCCATGATT +
Preference number: 4 (lower is better)
Translates to: SLEKLLSSPGQTLRCLDKTSYIS*IEYPMI
Trigger: AATCATGGGGTACTCAATGCAGGAGATGTATGAGGT...CTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAACTTTTCTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp GACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTTTGACCATGGAAACTaGAGAGGTGTAACGTTCCAT +
Preference number: 4 (lower is better)
Translates to: DNHIVLILIRSEKAAGIWFDHGN*RGVTFH
Trigger: ATGGAACGTTACACCTCTGCAGTTTCCATGGTCAAA...CCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp GTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAATTGCCTCAAGTCTGGTaGACCTCATGGAACATCAGT +
Preference number: 4 (lower is better)
Translates to: VLIRSRDNHIVLILIRSELPQVW*TSWNIS
Trigger: ACTGATGTTCCATGAGGTGCACCAGACTTGAGGCAA...TTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR GCA 90 bp AACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCCACTCAGTACCTCTGTaGCAGAAGAAAAGCTCAATT +
Preference number: 4 (lower is better)
Translates to: NHIVLILIRSEKAAGIWCHSVPL*QKKSSI
Trigger: AATTGAGCTTTTCTTCTGGCACAGAGGTACTGAGTG...GCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR GCA 90 bp GACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGATTTCTCAAGTCTGGTaGACCTCATGGAACATCAGT +
Preference number: 4 (lower is better)
Translates to: DNHIVLILIRSEKAAGIWISQVW*TSWNIS
Trigger: ACTGATGTTCCATGAGGTGCACCAGACTTGAGAAAT...CCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551814.1
CDS-3UTR CCA 90 bp GTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAGATACTCCTGGACGTTaGACACCACCTCATACATCT +
Preference number: 4 (lower is better)
Translates to: VLIRSRDNHIVLILIRSEDTPGR*TPPHTS
Trigger: AGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATC...TTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CCA 90 bp ACTCAGTACCTCTGTGCCAGAAGAAAAGCTCAATTTATTCAATCCTTAGAAAAGAACTCACGATACTCCTaGACGTTGGACACCACCTCA +
Preference number: 4 (lower is better)
Translates to: TQYLCARRKAQFIQSLEKNSRYS*TLDTTS
Trigger: TGAGGTGGTGTCCAACGTCCAGGAGTATCGTGAGTT...CTTTTCTAAGGATTGAATAAATTGAGCTTTTCTTCTGGCACAGAGGTACTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp AGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCATTATGTATTTCAGGCTaGAGGCAGGTTGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RSRDNHIVLILIRSEKAALCISG*RQVAFS
Trigger: AGAAAAGGCAACCTGCCTCCAGCCTGAAATACATAA...TGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp TTAGAAAAGTTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAAATAGTCTCTAAGTaGTTGAAGAGCTTGCCATCA +
Preference number: 4 (lower is better)
Translates to: LEKLLSSPGQTLRCLDKVQIVSK*LKSLPS
Trigger: TGATGGCAAGCTCTTCAACCACTTAGAGACTATTTG...GACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAACTTTTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CCA 90 bp AGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAAAAACTCAGGCCAAGTaGAAGAATAAGGTACAACTC +
Preference number: 4 (lower is better)
Translates to: RSRDNHIVLILIRSEKAAKTQAK*KNKVQL
Trigger: GAGTTGTACCTTATTCTTCCACTTGGCCTGAGTTTT...TGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR TCA 90 bp TTAGAAAAGTTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCGGAGAAACAGTATTATaGACACAGACTCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LEKLLSSPGQTLRCLDKVGETVL*TQTPFK
Trigger: TTTGAAAGGAGTCTGTGTTCATAATACTGTTTCTCC...GACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAACTTTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR TCA 90 bp AGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGAGAAACAGTATTATaGACACAGACTCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: RSRDNHIVLILIRSEKAAGETVL*TQTPFK
Trigger: TTTGAAAGGAGTCTGTGTTCATAATACTGTTTCTCC...TGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CCA 90 bp ACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATCAAATAGTCTCTAAGTaGTTGAAGAGCTTGCCATCA +
Preference number: 4 (lower is better)
Translates to: TLRCLDKVQRQPHSPYSNQIVSK*LKSLPS
Trigger: TGATGGCAAGCTCTTCAACCACTTAGAGACTATTTG...ATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CCA 90 bp AGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATAATAGAACCCAATTTCTaGGAAATTGAGAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: RDNHIVLILIRSEKAAGIIEPNF*EIERRN
Trigger: GTTTCTCCTCTCAATTTCCCAGAAATTGGGTTCTAT...TATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS CCA 90 bp GCAGGAGGTCAGAAACCTCATTGGTCGCGGCGGTGGCAGAGGGCCTaGGGGCGGGGCCGGTTGCGCGCCCGGGCTGAGCGAGAGCCGGCA +
Preference number: 5 (lower is better)
Translates to: AGGQKPHWSRRWQRA*GRGRLRARAEREPA
Trigger: TGCCGGCTCTCGCTCAGCCCGGGCGCGCAACCGGCCCCGCCCCCAGGCCCTCTGCCACCGCCGCGACCAATGAGGTTTCTGACCTCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000551566.1
ENST00000551911.5
CDS CCA 90 bp CTGCGCCCTCCTCACTCCAAAGGCGGAGCGGCAAGAGGCAGCGGCTaGGCTGGTTCGGGACCTCTGAGCGCAGGGGCGACGGGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: LRPPHSKGGAARGSG*AGSGPLSAGATGGG
Trigger: GCCGCCTCCCGTCGCCCCTGCGCTCAGAGGTCCCGAACCAGCCCAGCCGCTGCCTCTTGCCGCTCCGCCTTTGGAGTGAGGAGGGCGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000551566.1
ENST00000551911.5
CDS TCA 90 bp AAGGCGGAGCGGCAAGAGGCAGCGGCTGGGCTGGTTCGGGACCTCTaGGCGCAGGGGCGACGGGAGGCGGCAGCACCTCTCGCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: KAERQEAAAGLVRDL*AQGRREAAAPLALL
Trigger: GAGCAAGGCGAGAGGTGCTGCCGCCTCCCGTCGCCCCTGCGCTCAGAGGTCCCGAACCAGCCCAGCCGCTGCCTCTTGCCGCTCCGCCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000551566.1
ENST00000551911.5
CDS CCA 90 bp CCCTCCTCACTCCAAAGGCGGAGCGGCAAGAGGCAGCGGCTGGGCTaGTTCGGGACCTCTGAGCGCAGGGGCGACGGGAGGCGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: PSSLQRRSGKRQRLG*FGTSERRGDGRRQH
Trigger: GTGCTGCCGCCTCCCGTCGCCCCTGCGCTCAGAGGTCCCGAACCAGCCCAGCCGCTGCCTCTTGCCGCTCCGCCTTTGGAGTGAGGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000551566.1
ENST00000551911.5
CDS TCA 90 bp GCCCGCCCAGGCCATGCGCGCGACCCTGCCTGGCCCTCTAAGTTCTaGCGCGGGCTGCGCCCTCCTCACTCCAAAGGCGGAGCGGCAAGA +
Preference number: 5 (lower is better)
Translates to: ARPGHARDPAWPSKF*RGLRPPHSKGGAAR
Trigger: TCTTGCCGCTCCGCCTTTGGAGTGAGGAGGGCGCAGCCCGCGTCAGAACTTAGAGGGCCAGGCAGGGTCGCGCGCATGGCCTGGGCGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000551566.1
ENST00000551911.5
CDS CCA 90 bp ATGAAGGAACGGCTCGAAGGTAAGCCAGCCTCAGCCGCCAAGATCTaGGCAGCCCGAGGCAAGAGGAGGCTGCAGGAGGTCAGAAACCCC +
Preference number: 5 (lower is better)
Translates to: MKERLEGKPASAAKI*AARGKRRLQEVRNP
Trigger: GGGGTTTCTGACCTCCTGCAGCCTCCTCTTGCCTCGGGCTGCCCAGATCTTGGCGGCTGAGGCTGGCTTACCTTCGAGCCGTTCCTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433805.6
ENST00000546614.1
ENST00000550071.1
CDS CCA 90 bp ATGAAGGAACGGCTCGAAGGTAAGCCAGCCTCAGCCGCCAAGATCTaGGCAGCCCGAGGCAAGAGGAGGCTGCAGGAGGTCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: MKERLEGKPASAAKI*AARGKRRLQEVRNL
Trigger: GAGGTTTCTGACCTCCTGCAGCCTCCTCTTGCCTCGGGCTGCCCAGATCTTGGCGGCTGAGGCTGGCTTACCTTCGAGCCGTTCCTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000551566.1
ENST00000551911.5
CDS CCA 90 bp ATGAAGGAACGGCTCGAAGGTAAGCCAGCCTCAGCCGCCAAGATCTaGGCAGCCCGAGGCAAGAGGAGGCTGCAGGAGGTCAGAAACCTA +
Preference number: 5 (lower is better)
Translates to: MKERLEGKPASAAKI*AARGKRRLQEVRNL
Trigger: TAGGTTTCTGACCTCCTGCAGCCTCCTCTTGCCTCGGGCTGCCCAGATCTTGGCGGCTGAGGCTGGCTTACCTTCGAGCCGTTCCTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546544.5
CDS CCA 90 bp TGCCTCAAGTCTGGTGCACCTCATGGAACATCAGTTCACGGGGGATaGCTGTTTCTGGACCAAACTTGGTGGCTGCCCGACGCTCAAAGG +
Preference number: 5 (lower is better)
Translates to: CLKSGAPHGTSVHGG*LFLDQTWWLPDAQR
Trigger: CCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTGATGTTCCATGAGGTGCACCAGACTTGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000551911.5
ENST00000553234.1
CDS-3UTR CAA 90 bp CGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCGTTTCTGGACCAAACTaGGTGGCTGCCCGACGCTCA +
Preference number: 5 (lower is better)
Translates to: RSEKAAGIWCSYDGPDPFVSGPN*VAARRS
Trigger: TGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAAC...GAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS TCA 90 bp ACTTGCAAAAGCATTATCCAAAGCTCTACGTTAGCTCCCAGGGCATaGTTGCTGCCAGTCCCCGCCGCGCCTGCATCCCAGTATAGCACC +
Preference number: 5 (lower is better)
Translates to: TCKSIIQSSTLAPRA*LLPVPAAPASQYST
Trigger: GGTGCTATACTGGGATGCAGGCGCGGCGGGGACTGGCAGCAATCATGCCCTGGGAGCTAACGTAGAGCTTTGGATAATGCTTTTGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433805.6
ENST00000550071.1
CDS CCA 90 bp CTGGTGCACCTCATGGAACATCAGTTCACGGGGGATGGCTGTTTCTaGACCAAACTTGGTGGCTGCCCGACGCTCAAAGGCAGCAACATT +
Preference number: 5 (lower is better)
Translates to: LVHLMEHQFTGDGCF*TKLGGCPTLKGSNI
Trigger: AATGTTGCTGCCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTGATGTTCCATGAGGTGCACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000551814.1
ENST00000551911.5
ENST00000553234.1
CDS CCA 90 bp GGGAGGTCAGGGAGCAATCCCTTGCCTCAAGTCTGGTGCACCTCATaGAACATCAGTTCACGGGGGATGGCTGTTTCTGGACCAAACTTG +
Preference number: 5 (lower is better)
Translates to: GRSGSNPLPQVWCTS*NISSRGMAVSGPNL
Trigger: CAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTGATGTTCCATGAGGTGCACCAGACTTGAGGCAAGGGATTGCTCCCTGACCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000551911.5
ENST00000553234.1
CDS TCA 90 bp CGTTCCATGACAGGTGGAAAGCCAACCTCCAGCTGGGCTTTCAAATaGCCCTTACGGCTGGATACCACCAGAGACTTCTTACACCAGGGC +
Preference number: 5 (lower is better)
Translates to: RSMTGGKPTSSWAFK*PLRLDTTRDFLHQG
Trigger: GCCCTGGTGTAAGAAGTCTCTGGTGGTATCCAGCCGTAAGGGTCATTTGAAAGCCCAGCTGGAGGTTGGCTTTCCACCTGTCATGGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000550071.1
ENST00000551911.5
CDS TCA 90 bp GGGAGGGGGATGGCTAGGGATGAATCTTGCCCACCGATGATACCCTaGCATTCTTGCCTGGACAGGGTTATTTGGAGGGAAAAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: GRGMARDESCPPMIP*HSCLDRVIWREKGG
Trigger: ACCTCCCTTTTCCCTCCAAATAACCCTGTCCAGGCAAGAATGTCAGGGTATCATCGGTGGGCAAGATTCATCCCTAGCCATCCCCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546614.1
ENST00000551566.1
CDS CCA 90 bp TTTCTCAAGTCTGGTGCACCTCATGGAACATCAGTTCACGGGGGATaGCTGTTTCTGGACCAAACTTGGTGGCTGCCCGACGCTCAAAGG +
Preference number: 5 (lower is better)
Translates to: FLKSGAPHGTSVHGG*LFLDQTWWLPDAQR
Trigger: CCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTGATGTTCCATGAGGTGCACCAGACTTGAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551814.1
CDS-3UTR CAA 90 bp GACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGGCAGCACCTCTCGCCTaGCTCCCGTCCAGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: DNHIVLILIRSEKAAGIWAAPLA*LPSRLP
Trigger: CGGCAGCCTGGACGGGAGCAAGGCGAGAGGTGCTGC...CCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308197.10
CDS-3UTR CAA 90 bp ATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCCACAGGTCAGAAACCTCATaGGTCGCGGCGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: IWCSYDGPDPFLSTSHFHRSETS*VAAVAE
Trigger: CTCTGCCACCGCCGCGACCAATGAGGTTTCTGACCT...GTGGAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308197.10
CDS GCA 90 bp CATCAGTTCACGGGGGATGGCTGTTTCTGGACCAAACTTGGTGGCTaGCCGACGCTCAAAGGCAGCAACATTCTGTTTGACAACCTCATC +
Preference number: 5 (lower is better)
Translates to: HQFTGDGCFWTKLGG*PTLKGSNILFDNLI
Trigger: GATGAGGTTGTCAAACAGAATGTTGCTGCCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000551814.1
ENST00000551911.5
ENST00000553234.1
CDS-3UTR CAA 90 bp TCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATGTTTCTGGACCAAACTaGGTGGCTGCCCGACGCTCA +
Preference number: 5 (lower is better)
Translates to: SSPGQTLRCLDKVQRQPHVSGPN*VAARRS
Trigger: TGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAAC...ATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS TCA 90 bp ACGATACTCCTGGACGTTGGACACCACCTCATACATCTCCTGCATTaGGTACCTAGGAGAAGAAGAATCACAGGCCAAGGAGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: TILLDVGHHLIHLLH*VPRRRRITGQGAAS
Trigger: GCTGGCAGCTCCTTGGCCTGTGATTCTTCTTCTCCTAGGTACTCAATGCAGGAGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATCGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549545.1
CDS CCA 90 bp ACCACCAGAGACTTCTTACACCAGGGCACAAACTCACGATACTCCTaGACGTTGGACACCACCTCATACATCTCCTGCATTGAGTACCCC +
Preference number: 5 (lower is better)
Translates to: TTRDFLHQGTNSRYS*TLDTTSYISCIEYP
Trigger: GGGGTACTCAATGCAGGAGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATCGTGAGTTTGTGCCCTGGTGTAAGAAGTCTCTGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000550071.1
ENST00000551911.5
CDS CCA 90 bp GTGGAAAGCCAACCTCCAGCTGGGCTTTCAAATGACCCTTACGGCTaGATACCACCAGAGACTTCTTACACCAGGGCACAAACTCACGAT +
Preference number: 5 (lower is better)
Translates to: VESQPPAGLSNDPYG*IPPETSYTRAQTHD
Trigger: ATCGTGAGTTTGTGCCCTGGTGTAAGAAGTCTCTGGTGGTATCCAGCCGTAAGGGTCATTTGAAAGCCCAGCTGGAGGTTGGCTTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000550071.1
ENST00000551911.5
CDS-3UTR CAA 90 bp ATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGTTTCTGGACCAAACTaGGTGGCTGCCCGACGCTCA +
Preference number: 5 (lower is better)
Translates to: ILIRSEKAAGIWCSYDGPVSGPN*VAARRS
Trigger: TGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAAC...AGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS CCA 90 bp AGGTTTGACCATGGAAACTGCAGAGGTGTAACGTTCCATGACAGGTaGAAAGCCAACCTCCAGCTGGGCTTTCAAATGACCCTTACGGCT +
Preference number: 5 (lower is better)
Translates to: RFDHGNCRGVTFHDR*KANLQLGFQMTLTA
Trigger: AGCCGTAAGGGTCATTTGAAAGCCCAGCTGGAGGTTGGCTTTCCACCTGTCATGGAACGTTACACCTCTGCAGTTTCCATGGTCAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000550071.1
ENST00000551911.5
CDS-3UTR CAA 90 bp CTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGTCAGGGAGCAATCCCTaGCCTCAAGTCTGGTGCACC +
Preference number: 5 (lower is better)
Translates to: LILIRSEKAAGIWCSYDGSGSNP*PQVWCT
Trigger: GGTGCACCAGACTTGAGGCAAGGGATTGCTCCCTGA...CCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CAA 90 bp TTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAATCAGGGAGCAATCCCTaGCCTCAAGTCTGGTGCACC +
Preference number: 5 (lower is better)
Translates to: LLSSPGQTLRCLDKVQRQSGSNP*PQVWCT
Trigger: GGTGCACCAGACTTGAGGCAAGGGATTGCTCCCTGA...TTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS GCA 90 bp AACTCACGATACTCCTGGACGTTGGACACCACCTCATACATCTCCTaGATTGAGTACCTAGGAGAAGAAGAATCACAGGCCAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: NSRYSWTLDTTSYIS*IEYLGEEESQAKEL
Trigger: CAGCTCCTTGGCCTGTGATTCTTCTTCTCCTAGGTACTCAATGCAGGAGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATCGTGAGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549545.1
CDS CCA 90 bp ACCACCAGAGACTTCTTACACCAGGGCACAAACTCACGATACTCCTaGACGTTGGACACCACCTCATACATCTCCTGCATTGAGTACCTA +
Preference number: 5 (lower is better)
Translates to: TTRDFLHQGTNSRYS*TLDTTSYISCIEYL
Trigger: TAGGTACTCAATGCAGGAGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATCGTGAGTTTGTGCCCTGGTGTAAGAAGTCTCTGGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549545.1
CDS-3UTR CAA 90 bp ATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTCGATACTCCTGGACGTaGGACACCACCTCATACATC +
Preference number: 5 (lower is better)
Translates to: ILIRSEKAAGIWCSYDGPRYSWT*DTTSYI
Trigger: GATGTATGAGGTGGTGTCCAACGTCCAGGAGTATCG...AGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CAA 90 bp CTGAGGAATCTCAGGCAGGGTAAAAGTTACTTACCACTCAGTACCTCTGTGCCACGATACTCCTGGACGTaGGACACCACCTCATACATC +
Preference number: 5 (lower is better)
Translates to: LRNLRQGKSYLPLSTSVPRYSWT*DTTSYI
Trigger: GATGTATGAGGTGGTGTCCAACGTCCAGGAGTATCG...TGGCACAGAGGTACTGAGTGGTAAGTAACTTTTACCCTGCCTGAGATTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CAA 90 bp GGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCATTTCAAGTGGTTGAAGAGCTaGCCATCAGTACAAACAGCG +
Preference number: 5 (lower is better)
Translates to: GIWCSYDGPDPFLSTSHFKWLKS*PSVQTA
Trigger: CGCTGTTTGTACTGATGGCAAGCTCTTCAACCACTT...GAAATGAGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553234.1
CDS-3UTR CAA 90 bp CAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTGTTTCTGGACCAAACTaGGTGGCTGCCCGACGCTCA +
Preference number: 5 (lower is better)
Translates to: QTLRCLDKVQRQPHSPYSVSGPN*VAARRS
Trigger: TGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAAC...AGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000551814.1
ENST00000553234.1
CDS-3UTR CAA 90 bp AGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCATCAGGGAGCAATCCCTaGCCTCAAGTCTGGTGCACC +
Preference number: 5 (lower is better)
Translates to: RSRDNHIVLILIRSEKAASGSNP*PQVWCT
Trigger: GGTGCACCAGACTTGAGGCAAGGGATTGCTCCCTGA...TGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CAA 90 bp TTTCTCCTCAGCACTGGTGGTAAGAAAGCCCCTTGCTCTCTAGTAGCCAGGCAGCCCTTCTCGTACAACTaGCAAAAGCATTATCCAAAG +
Preference number: 5 (lower is better)
Translates to: FLLSTGGKKAPCSLVARQPFSYN*QKHYPK
Trigger: CTTTGGATAATGCTTTTGCAAGTTGTACGAGAAGGG...CTGCCTGGCTACTAGAGAGCAAGGGGCTTTCTTACCACCAGTGCTGAGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433805.6
CDS-3UTR CAA 90 bp AGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATCAGGGAGCAATCCCTaGCCTCAAGTCTGGTGCACC +
Preference number: 5 (lower is better)
Translates to: RDNHIVLILIRSEKAAGISGSNP*PQVWCT
Trigger: GGTGCACCAGACTTGAGGCAAGGGATTGCTCCCTGA...TATGCCTGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CAA 90 bp GTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCCCAATTTCTGGGAAATaGAGAGGAGAAACAGTATTA +
Preference number: 5 (lower is better)
Translates to: VVKRLQAYGAPTMGLTLSPISGK*RGETVL
Trigger: TAATACTGTTTCTCCTCTCAATTTCCCAGAAATTGG...GGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CAA 90 bp GCTGCAGGCATATGGTGCTCCTACGATGGGCCTGACCCTTTCCTAAGCACATCTCCAATTTCTGGGAAATaGAGAGGAGAAACAGTATTA +
Preference number: 5 (lower is better)
Translates to: AAGIWCSYDGPDPFLSTSPISGK*RGETVL
Trigger: TAATACTGTTTCTCCTCTCAATTTCCCAGAAATTGG...AGATGTGCTTAGGAAAGGGTCAGGCCCATCGTAGGAGCACCATATGCCTGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CAA 90 bp CAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTCAGGCTGGAGGCAGGTaGCCTTTTCTCCTGAGGAAT +
Preference number: 5 (lower is better)
Translates to: QTLRCLDKVQRQPHSPYSQAGGR*PFLLRN
Trigger: ATTCCTCAGGAGAAAAGGCAACCTGCCTCCAGCCTG...AGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CAA 90 bp AGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAAAAGGCTGCACAGGCTGGAGGCAGGTaGCCTTTTCTCCTGAGGAAT +
Preference number: 5 (lower is better)
Translates to: RSRDNHIVLILIRSEKAAQAGGR*PFLLRN
Trigger: ATTCCTCAGGAGAAAAGGCAACCTGCCTCCAGCCTG...TGCAGCCTTTTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CAA 90 bp TTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAAAAGTGGTTGAAGAGCTaGCCATCAGTACAAACAGCC +
Preference number: 5 (lower is better)
Translates to: LLSSPGQTLRCLDKVQRQKWLKS*PSVQTA
Trigger: GGCTGTTTGTACTGATGGCAAGCTCTTCAACCACTT...TTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CAA 90 bp ATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTCAGACTCCTTTCAAATaGGAACAGGAGCCAAACCAA +
Preference number: 5 (lower is better)
Translates to: ILIRSEKAAGIWCSYDGPQTPFK*EQEPNQ
Trigger: TTGGTTTGGCTCCTGTTCCAATTTGAAAGGAGTCTG...AGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CAA 90 bp CTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGCAGGCTGGAGGCAGGTaGCCTTTTCTCCTGAGGAAT +
Preference number: 5 (lower is better)
Translates to: LRCLDKVQRQPHSPYSNSQAGGR*PFLLRN
Trigger: ATTCCTCAGGAGAAAAGGCAACCTGCCTCCAGCCTG...CGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CAA 90 bp TTTCTCCTGAGGAATCTCAGGCAGGGTAAAAGTTACTTACCACTCAGTACCTCTAAGTGGTTGAAGAGCTaGCCATCAGTACAAACAGCC +
Preference number: 5 (lower is better)
Translates to: FLLRNLRQGKSYLPLSTSKWLKS*PSVQTA
Trigger: GGCTGTTTGTACTGATGGCAAGCTCTTCAACCACTT...AGAGGTACTGAGTGGTAAGTAACTTTTACCCTGCCTGAGATTCCTCAGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CAA 90 bp ATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTATAGTCTCTAAGTGGTaGAAGAGCTTGCCATCAGTA +
Preference number: 5 (lower is better)
Translates to: ILIRSEKAAGIWCSYDGPIVSKW*KSLPSV
Trigger: TACTGATGGCAAGCTCTTCAACCACTTAGAGACTAT...AGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CAA 90 bp ACTCAGTACCTCTGTGCCAGAAGAAAAGCTCAATTTATTCAATCCTTAGAAAAGGTTTCTGGACCAAACTaGGTGGCTGCCCGACGCTCA +
Preference number: 5 (lower is better)
Translates to: TQYLCARRKAQFIQSLEKVSGPN*VAARRS
Trigger: TGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAAC...CTTTTCTAAGGATTGAATAAATTGAGCTTTTCTTCTGGCACAGAGGTACTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CAA 90 bp TTGCTCTCTAGTAGCCAGGCAGCATGGACTTACAGTCTTAAAATGAGGCTTTATAAGTGGTTGAAGAGCTaGCCATCAGTACAAACAGCC +
Preference number: 5 (lower is better)
Translates to: LLSSSQAAWTYSLKMRLYKWLKS*PSVQTA
Trigger: GGCTGTTTGTACTGATGGCAAGCTCTTCAACCACTT...ATAAAGCCTCATTTTAAGACTGTAAGTCCATGCTGCCTGGCTACTAGAGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CAA 90 bp GAAAAGTTACTATCGTCCCCTGGTCAGACACTAAGGTGTCTTGATAAGGTCCAGATAGTCTCTAAGTGGTaGAAGAGCTTGCCATCAGTA +
Preference number: 5 (lower is better)
Translates to: EKLLSSPGQTLRCLDKVQIVSKW*KSLPSV
Trigger: TACTGATGGCAAGCTCTTCAACCACTTAGAGACTAT...CTGGACCTTATCAAGACACCTTAGTGTCTGACCAGGGGACGATAGTAACTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CAA 90 bp ACTCAGTACCTCTGTGCCAGAAGAAAAGCTCAATTTATTCAATCCTTAGAAAAGCGATACTCCTGGACGTaGGACACCACCTCATACATC +
Preference number: 5 (lower is better)
Translates to: TQYLCARRKAQFIQSLEKRYSWT*DTTSYI
Trigger: GATGTATGAGGTGGTGTCCAACGTCCAGGAGTATCG...CTTTTCTAAGGATTGAATAAATTGAGCTTTTCTTCTGGCACAGAGGTACTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS-3UTR CAA 90 bp ATTCTAATTCGTAGTGAAAAGGCTGCAGGCATATGGTGCTCCTACGATGGGCCTCCAATTTCTGGGAAATaGAGAGGAGAAACAGTATTA +
Preference number: 5 (lower is better)
Translates to: ILIRSEKAAGIWCSYDGPPISGK*RGETVL
Trigger: TAATACTGTTTCTCCTCTCAATTTCCCAGAAATTGG...AGGCCCATCGTAGGAGCACCATATGCCTGCAGCCTTTTCACTACGAATTAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CAA 90 bp CAGACACTAAGGTGTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTATAGTCTCTAAGTGGTaGAAGAGCTTGCCATCAGTA +
Preference number: 5 (lower is better)
Translates to: QTLRCLDKVQRQPHSPYSIVSKW*KSLPSV
Trigger: TACTGATGGCAAGCTCTTCAACCACTTAGAGACTAT...AGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGACACCTTAGTGTCTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CAA 90 bp GTCTTGATAAGGTCCAGAGACAACCACATAGTCCTTATTCTAATTCGTAGTGAACAGACTCCTTTCAAATaGGAACAGGAGCCAAACCAA +
Preference number: 5 (lower is better)
Translates to: VLIRSRDNHIVLILIRSEQTPFK*EQEPNQ
Trigger: TTGGTTTGGCTCCTGTTCCAATTTGAAAGGAGTCTG...TTCACTACGAATTAGAATAAGGACTATGTGGTTGTCTCTGGACCTTATCAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000553234.1
CDS-3UTR CAA 90 bp TTTCTCCTGAGGAATCTCAGGCAGGGTAAAAGTTACTTACCACTCAGTACCTCTCCAATTTCTGGGAAATaGAGAGGAGAAACAGTATTA +
Preference number: 5 (lower is better)
Translates to: FLLRNLRQGKSYLPLSTSPISGK*RGETVL
Trigger: TAATACTGTTTCTCCTCTCAATTTCCCAGAAATTGG...AGAGGTACTGAGTGGTAAGTAACTTTTACCCTGCCTGAGATTCCTCAGGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
CDS CCA 72 bp CAGAAACCTCATTGGTCGCGGCGGTGGCAGAGGGCCTaGGGGCGGGGCCGGTTGCGCGCCCGGGCTGAGCGA +
Preference number: 6 (lower is better)
Translates to: QKPHWSRRWQRA*GRGRLRARAER
Trigger: TCGCTCAGCCCGGGCGCGCAACCGGCCCCGCCCCCAGGCCCTCTGCCACCGCCGCGACCAATGAGGTTTCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000551566.1
ENST00000551911.5
CDS CCA 72 bp CTCCAAAGGCGGAGCGGCAAGAGGCAGCGGCTGGGCTaGTTCGGGACCTCTGAGCGCAGGGGCGACGGGAGG +
Preference number: 6 (lower is better)
Translates to: LQRRSGKRQRLG*FGTSERRGDGR
Trigger: CCTCCCGTCGCCCCTGCGCTCAGAGGTCCCGAACCAGCCCAGCCGCTGCCTCTTGCCGCTCCGCCTTTGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000551566.1
ENST00000551911.5
CDS CCA 72 bp CCTCACTCCAAAGGCGGAGCGGCAAGAGGCAGCGGCTaGGCTGGTTCGGGACCTCTGAGCGCAGGGGCGACG +
Preference number: 6 (lower is better)
Translates to: PHSKGGAARGSG*AGSGPLSAGAT
Trigger: CGTCGCCCCTGCGCTCAGAGGTCCCGAACCAGCCCAGCCGCTGCCTCTTGCCGCTCCGCCTTTGGAGTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000551566.1
ENST00000551911.5
CDS TCA 72 bp GGCCATGCGCGCGACCCTGCCTGGCCCTCTAAGTTCTaGCGCGGGCTGCGCCCTCCTCACTCCAAAGGCGGA +
Preference number: 6 (lower is better)
Translates to: GHARDPAWPSKF*RGLRPPHSKGG
Trigger: TCCGCCTTTGGAGTGAGGAGGGCGCAGCCCGCGTCAGAACTTAGAGGGCCAGGCAGGGTCGCGCGCATGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308197.10
ENST00000551566.1
ENST00000551911.5
CDS CCA 72 bp CGGCTCGAAGGTAAGCCAGCCTCAGCCGCCAAGATCTaGGCAGCCCGAGGCAAGAGGAGGCTGCAGGAGGTC +
Preference number: 6 (lower is better)
Translates to: RLEGKPASAAKI*AARGKRRLQEV
Trigger: GACCTCCTGCAGCCTCCTCTTGCCTCGGGCTGCCCAGATCTTGGCGGCTGAGGCTGGCTTACCTTCGAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000546614.1
ENST00000550071.1
ENST00000551566.1
ENST00000551911.5
ENST00000553234.1
CDS TCA 72 bp AGCATTATCCAAAGCTCTACGTTAGCTCCCAGGGCATaGTTGCTGCCAGTCCCCGCCGCGCCTGCATCCCAG +
Preference number: 6 (lower is better)
Translates to: SIIQSSTLAPRA*LLPVPAAPASQ
Trigger: CTGGGATGCAGGCGCGGCGGGGACTGGCAGCAATCATGCCCTGGGAGCTAACGTAGAGCTTTGGATAATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433805.6
ENST00000546614.1
ENST00000550071.1
CDS CCA 72 bp GAGTGGCAGGGGAGGACTGAGGATCAGTATTGTAGCTaGGGAGGGGGATGGCTAGGGATGAATCTTGCCCAC +
Preference number: 6 (lower is better)
Translates to: EWQGRTEDQYCS*GGGWLGMNLAH
Trigger: GTGGGCAAGATTCATCCCTAGCCATCCCCCTCCCCAGCTACAATACTGATCCTCAGTCCTCCCCTGCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546614.1
CDS CCA 72 bp CTCATGGAACATCAGTTCACGGGGGATGGCTGTTTCTaGACCAAACTTGGTGGCTGCCCGACGCTCAAAGGC +
Preference number: 6 (lower is better)
Translates to: LMEHQFTGDGCF*TKLGGCPTLKG
Trigger: GCCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTGATGTTCCATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000551814.1
ENST00000551911.5
ENST00000553234.1
CDS CCA 72 bp TCTGGTGCACCTCATGGAACATCAGTTCACGGGGGATaGCTGTTTCTGGACCAAACTTGGTGGCTGCCCGAC +
Preference number: 6 (lower is better)
Translates to: SGAPHGTSVHGG*LFLDQTWWLPD
Trigger: GTCGGGCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTGATGTTCCATGAGGTGCACCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000551814.1
ENST00000551911.5
ENST00000553234.1
CDS GCA 72 bp ACGGGGGATGGCTGTTTCTGGACCAAACTTGGTGGCTaGCCGACGCTCAAAGGCAGCAACATTCTGTTTGAC +
Preference number: 6 (lower is better)
Translates to: TGDGCFWTKLGG*PTLKGSNILFD
Trigger: GTCAAACAGAATGTTGCTGCCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000551814.1
ENST00000551911.5
ENST00000553234.1
CDS CCA 72 bp GTTCACGGGGGATGGCTGTTTCTGGACCAAACTTGGTaGCTGCCCGACGCTCAAAGGCAGCAACATTCTGTT +
Preference number: 6 (lower is better)
Translates to: VHGGWLFLDQTW*LPDAQRQQHSV
Trigger: AACAGAATGTTGCTGCCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000551814.1
ENST00000551911.5
ENST00000553234.1
CDS CCA 72 bp TCAGTTCACGGGGGATGGCTGTTTCTGGACCAAACTTaGTGGCTGCCCGACGCTCAAAGGCAGCAACATTCT +
Preference number: 6 (lower is better)
Translates to: SVHGGWLFLDQT*WLPDAQRQQHS
Trigger: AGAATGTTGCTGCCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000551814.1
ENST00000551911.5
ENST00000553234.1
CDS CCA 72 bp GGGAGCAATCCCTTGCCTCAAGTCTGGTGCACCTCATaGAACATCAGTTCACGGGGGATGGCTGTTTCTGGA +
Preference number: 6 (lower is better)
Translates to: GSNPLPQVWCTS*NISSRGMAVSG
Trigger: TCCAGAAACAGCCATCCCCCGTGAACTGATGTTCCATGAGGTGCACCAGACTTGAGGCAAGGGATTGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000551911.5
ENST00000553234.1
CDS CAA 72 bp ATCAGTTCACGGGGGATGGCTGTTTCTGGACCAAACTaGGTGGCTGCCCGACGCTCAAAGGCAGCAACATTC +
Preference number: 6 (lower is better)
Translates to: ISSRGMAVSGPN*VAARRSKAATF
Trigger: GAATGTTGCTGCCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000551814.1
ENST00000551911.5
ENST00000553234.1
CDS CAA 72 bp GGAAGTGGGGTAGAAGGGAGGTCAGGGAGCAATCCCTaGCCTCAAGTCTGGTGCACCTCATGGAACATCAGT +
Preference number: 6 (lower is better)
Translates to: GSGVEGRSGSNP*PQVWCTSWNIS
Trigger: ACTGATGTTCCATGAGGTGCACCAGACTTGAGGCAAGGGATTGCTCCCTGACCTCCCTTCTACCCCACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000551911.5
ENST00000553234.1
CDS CCA 72 bp CAACCTCCAGCTGGGCTTTCAAATGACCCTTACGGCTaGATACCACCAGAGACTTCTTACACCAGGGCACAA +
Preference number: 6 (lower is better)
Translates to: QPPAGLSNDPYG*IPPETSYTRAQ
Trigger: TTGTGCCCTGGTGTAAGAAGTCTCTGGTGGTATCCAGCCGTAAGGGTCATTTGAAAGCCCAGCTGGAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000550071.1
ENST00000551911.5
CDS CAA 90 bp TCATGGAACATCAGTTCACGGGGGATGGCTGTTTCTGGACCAAACTaGGTGGCTGCCCGACGCTCAAAGGCAGCAACATTCTGTTTGACA +
Preference number: 6 (lower is better)
Translates to: SWNISSRGMAVSGPN*VAARRSKAATFCLT
Trigger: TGTCAAACAGAATGTTGCTGCCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTGATGTTCCATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000551814.1
ENST00000551911.5
ENST00000553234.1
CDS CAA 90 bp GCTGCAGGAGGTCAGAAACCCCGAGAACTTCCCTTCTCGTACAACTaGCAAAAGCATTATCCAAAGCTCTACGTTAGCTCCCAGGGCATG +
Preference number: 6 (lower is better)
Translates to: AAGGQKPRELPFSYN*QKHYPKLYVSSQGM
Trigger: CATGCCCTGGGAGCTAACGTAGAGCTTTGGATAATGCTTTTGCAAGTTGTACGAGAAGGGAAGTTCTCGGGGTTTCTGACCTCCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433805.6
ENST00000546614.1
ENST00000550071.1
CDS CAA 90 bp TTGCCCACCGATGATACCCTGACATTCTTGCCTGGACAGGGTTATTaGGAGGGAAAAGGGAGGTGCAAGGATGCAAGGCAGAGAATGCTT +
Preference number: 6 (lower is better)
Translates to: LPTDDTLTFLPGQGY*EGKGRCKDARQRML
Trigger: AAGCATTCTCTGCCTTGCATCCTTGCACCTCCCTTTTCCCTCCAAATAACCCTGTCCAGGCAAGAATGTCAGGGTATCATCGGTGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546614.1
ENST00000551566.1
CDS TCA 72 bp ACAGGTGGAAAGCCAACCTCCAGCTGGGCTTTCAAATaGCCCTTACGGCTGGATACCACCAGAGACTTCTTA +
Preference number: 6 (lower is better)
Translates to: TGGKPTSSWAFK*PLRLDTTRDFL
Trigger: TAAGAAGTCTCTGGTGGTATCCAGCCGTAAGGGTCATTTGAAAGCCCAGCTGGAGGTTGGCTTTCCACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000550071.1
ENST00000551911.5
CDS TCA 72 bp AGGTGCAAGGATGCAAGGCAGAGAATGCTTACCCCATaGTTCTACGCTCCGAGTAAGCCTTTCGCTTGTTGG +
Preference number: 6 (lower is better)
Translates to: RCKDARQRMLTP*FYAPSKPFACW
Trigger: CCAACAAGCGAAAGGCTTACTCGGAGCGTAGAATCATGGGGTAAGCATTCTCTGCCTTGCATCCTTGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546614.1
ENST00000551566.1
CDS CCA 72 bp TACACCAGGGCACAAACTCACGATACTCCTGGACGTTaGACACCACCTCATACATCTCCTGCATTGAGTACC +
Preference number: 6 (lower is better)
Translates to: YTRAQTHDTPGR*TPPHTSPALST
Trigger: GGTACTCAATGCAGGAGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATCGTGAGTTTGTGCCCTGGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000550071.1
ENST00000551911.5
CDS CCA 72 bp CATGGAAACTGCAGAGGTGTAACGTTCCATGACAGGTaGAAAGCCAACCTCCAGCTGGGCTTTCAAATGACC +
Preference number: 6 (lower is better)
Translates to: HGNCRGVTFHDR*KANLQLGFQMT
Trigger: GGTCATTTGAAAGCCCAGCTGGAGGTTGGCTTTCCACCTGTCATGGAACGTTACACCTCTGCAGTTTCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000550071.1
ENST00000551911.5
CDS CCA 72 bp CAGCAACCAAGAAGGGAGAAATTAAGGTCGGAAGAGTaGCAGGGGAGGACTGAGGATCAGTATTGTAGCTGG +
Preference number: 6 (lower is better)
Translates to: QQPRREKLRSEE*QGRTEDQYCSW
Trigger: CCAGCTACAATACTGATCCTCAGTCCTCCCCTGCCACTCTTCCGACCTTAATTTCTCCCTTCTTGGTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546614.1
CDS TCA 72 bp ATGGCTAGGGATGAATCTTGCCCACCGATGATACCCTaGCATTCTTGCCTGGACAGGGTTATTTGGAGGGAA +
Preference number: 6 (lower is better)
Translates to: MARDESCPPMIP*HSCLDRVIWRE
Trigger: TTCCCTCCAAATAACCCTGTCCAGGCAAGAATGTCAGGGTATCATCGGTGGGCAAGATTCATCCCTAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546614.1
ENST00000551566.1
CDS TCA 72 bp CTGGACGTTGGACACCACCTCATACATCTCCTGCATTaGGTACCTAGGAGAAGAAGAATCACAGGCCAAGGA +
Preference number: 6 (lower is better)
Translates to: LDVGHHLIHLLH*VPRRRRITGQG
Trigger: TCCTTGGCCTGTGATTCTTCTTCTCCTAGGTACTCAATGCAGGAGATGTATGAGGTGGTGTCCAACGTCCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549545.1
CDS GCA 72 bp TACTCCTGGACGTTGGACACCACCTCATACATCTCCTaGATTGAGTACCTAGGAGAAGAAGAATCACAGGCC +
Preference number: 6 (lower is better)
Translates to: YSWTLDTTSYIS*IEYLGEEESQA
Trigger: GGCCTGTGATTCTTCTTCTCCTAGGTACTCAATGCAGGAGATGTATGAGGTGGTGTCCAACGTCCAGGAGTA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549545.1
CDS CCA 72 bp GACTTCTTACACCAGGGCACAAACTCACGATACTCCTaGACGTTGGACACCACCTCATACATCTCCTGCATT +
Preference number: 6 (lower is better)
Translates to: DFLHQGTNSRYS*TLDTTSYISCI
Trigger: AATGCAGGAGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATCGTGAGTTTGTGCCCTGGTGTAAGAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000550071.1
ENST00000551911.5
CDS CCA 72 bp CTTGCCATCAGTACAAACAGCGATACTCCTGGACGTTaGACACCACCTCATACATCTCCTGCATTGAGTACC +
Preference number: 6 (lower is better)
Translates to: LAISTNSDTPGR*TPPHTSPALST
Trigger: GGTACTCAATGCAGGAGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATCGCTGTTTGTACTGATGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553234.1
CDS CAA 72 bp TTACACCAGGGCACAAACTCACGATACTCCTGGACGTaGGACACCACCTCATACATCTCCTGCATTGAGTAC +
Preference number: 6 (lower is better)
Translates to: LHQGTNSRYSWT*DTTSYISCIEY
Trigger: GTACTCAATGCAGGAGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATCGTGAGTTTGTGCCCTGGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000549545.1
ENST00000550071.1
ENST00000551911.5
CDS CAA 72 bp GCTTGCCATCAGTACAAACAGCGATACTCCTGGACGTaGGACACCACCTCATACATCTCCTGCATTGAGTAC +
Preference number: 6 (lower is better)
Translates to: ACHQYKQRYSWT*DTTSYISCIEY
Trigger: GTACTCAATGCAGGAGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATCGCTGTTTGTACTGATGGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553234.1
CDS CAA 90 bp AGAGACTTCTTACACCAGGGCACAAACTCACGATACTCCTGGACGTaGGACACCACCTCATACATCTCCTGCATTGAGTACCCCATGATT +
Preference number: 6 (lower is better)
Translates to: RDFLHQGTNSRYSWT*DTTSYISCIEYPMI
Trigger: AATCATGGGGTACTCAATGCAGGAGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATCGTGAGTTTGTGCCCTGGTGTAAGAAGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308197.10
ENST00000433805.6
ENST00000546544.5
ENST00000550071.1
ENST00000551911.5
CDS CAA 90 bp AGAGACTTCTTACACCAGGGCACAAACTCACGATACTCCTGGACGTaGGACACCACCTCATACATCTCCTGCATTGAGTACCTAGGAGAA +
Preference number: 6 (lower is better)
Translates to: RDFLHQGTNSRYSWT*DTTSYISCIEYLGE
Trigger: TTCTCCTAGGTACTCAATGCAGGAGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATCGTGAGTTTGTGCCCTGGTGTAAGAAGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549545.1
CDS GCA 72 bp GTCAGAAACCCCGAGAACTTCCCTTCTCGTACAACTTaGAAAAGCATTATCCAAAGCTCTACGTTAGCTCCC +
Preference number: 6 (lower is better)
Translates to: VRNPENFPSRTT*KSIIQSSTLAP
Trigger: GGGAGCTAACGTAGAGCTTTGGATAATGCTTTTGCAAGTTGTACGAGAAGGGAAGTTCTCGGGGTTTCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433805.6
ENST00000546614.1
ENST00000550071.1
CDS CAA 72 bp GGTCAGAAACCCCGAGAACTTCCCTTCTCGTACAACTaGCAAAAGCATTATCCAAAGCTCTACGTTAGCTCC +
Preference number: 6 (lower is better)
Translates to: GQKPRELPFSYN*QKHYPKLYVSS
Trigger: GGAGCTAACGTAGAGCTTTGGATAATGCTTTTGCAAGTTGTACGAGAAGGGAAGTTCTCGGGGTTTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433805.6
ENST00000546614.1
ENST00000550071.1
CDS TCA 72 bp CCATCTAGGGAGAACAGAGGCTGTCAGTTTTACTGGTaGTCACACAAGGATCAGATCCCAGCTCTTAACAAT +
Preference number: 6 (lower is better)
Translates to: PSRENRGCQFYW*SHKDQIPALNN
Trigger: ATTGTTAAGAGCTGGGATCTGATCCTTGTGTGATCACCAGTAAAACTGACAGCCTCTGTTCTCCCTAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549545.1