Pregenerated sensors for COPS8 (Homo sapiens)
Ensembl gene IDs: ENSG00000198612Ensembl transcript IDs: ENST00000354371.7, ENST00000392008.6, ENST00000470452.5
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCAGGGTAAGTCCCAGAGCAAATTTTAGAGATATCCAATGGATCTaGAACAGGGTGCTGTCAGGCTACACTTGTACACAGATGGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: ARVSPRANFRDIQWI*NRVLSGYTCTQMAG Trigger: GCCAGCCATCTGTGTACAAGTGTAGCCTGACAGCACCCTGTTTCAGATCCATTGGATATCTCTAAAATTTGCTCTGGGACTTACCCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR TCA 90 bp | GACAAGGAAGAGAGTGTTTATTCACCATGTCATGTTCACAACTGCTaGTGGGCTGCCCAATCAGGTTTGTGTGGGCATCCTGATAGTAGT | + |
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Preference number: 1 (lower is better) Translates to: DKEESVYSPCHVHNC*WAAQSGLCGHPDSS Trigger: ACTACTATCAGGATGCCCACACAAACCTGATTGGGCAGCCCATCAGCAGTTGTGAACATGACATGGTGAATAAACACTCTCTTCCTTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR TCA 90 bp | TACAACAAACAACTTCAAATATTCAGAGGGCTGTCACACAGAGAATaGAAGACTTGCTCAGTATTTCTCCAAAGGGCAGAACTTGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: YNKQLQIFRGLSHRE*KTCSVFLQRAELEP Trigger: TGGCTCAAGTTCTGCCCTTTGGAGAAATACTGAGCAAGTCTTTCATTCTCTGTGTGACAGCCCTCTGAATATTTGAAGTTGTTTGTTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR TCA 90 bp | TTGGCAGCATATCAATTTGTCCTGAGAACTGATAATAAAGGGAAGTaGAATCAAGCACTTACCCTGCCTTTCTTGTACAGTGATGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: LAAYQFVLRTDNKGK*NQALTLPFLYSDEV Trigger: AACCTCATCACTGTACAAGAAAGGCAGGGTAAGTGCTTGATTTCACTTCCCTTTATTATCAGTTCTCAGGACAAATTGATATGCTGCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR-3UTR CCA 90 bp | TCCCCAGTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTCCAAATGGAGTACGGCATGTGCTaGGACAGAGAAAAGACAGTT | + |
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Preference number: 2 (lower is better) Translates to: SPVIQILCLGTIFLQVQMEYGMC*DREKTV Trigger: AACTGTCTTTTCTCTGTCCCAGCACATGCCGTACTC...CATTTGGACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCACTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| 3UTR-3UTR CCA 90 bp | ATCATAATCCCCAGTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTGAGTACGGCATGTGCTaGGACAGAGAAAAGACAGTT | + |
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Preference number: 2 (lower is better) Translates to: IIIPSDSDTVPGDNLSSSEYGMC*DREKTV Trigger: AACTGTCTTTTCTCTGTCCCAGCACATGCCGTACTC...ACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCACTGGGGATTATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| 3UTR-3UTR TCA 90 bp | ATTTTAGAGATATCCAATGGATCTGAAACAGGGTGCTGTCAGGCTACACTTGTAAATCATAATCCCCAGTaGTTCAGATACTGTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ILEISNGSETGCCQATLVNHNPQ*FRYCAW Trigger: CCAGGCACAGTATCTGAATCACTGGGGATTATGATT...TACAAGTGTAGCCTGACAGCACCCTGTTTCAGATCCATTGGATATCTCTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGAATCCCAAGTCTTTAAGAGCCTCCTTGAATCCTGGACATCTTGTACCAGACAAATGCAGAGTAAATaGACTAAGGGCTGTTATAAC | + |
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Preference number: 2 (lower is better) Translates to: TESQVFKSLLESWTSCTRQMQSK*TKGCYN Trigger: GTTATAACAGCCCTTAGTTCATTTACTCTGCATTTG...TCTGGTACAAGATGTCCAGGATTCAAGGAGGCTCTTAAAGACTTGGGATTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR-3UTR GCA 90 bp | ATTTTAGAGATATCCAATGGATCTGAAACAGGGTGCTGTCAGGCTACACTTGTAAAGCAACCAATGGGCTaGAGGATAGTTGTACAAAGT | + |
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Preference number: 2 (lower is better) Translates to: ILEISNGSETGCCQATLVKQPMG*RIVVQS Trigger: ACTTTGTACAACTATCCTGCAGCCCATTGGTTGCTT...TACAAGTGTAGCCTGACAGCACCCTGTTTCAGATCCATTGGATATCTCTAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR CAA 90 bp | TTAAGAGCCTCCTTGAATCCTGGACATCTTGTACCAGATATGAACTaGTACACTTACTGCCCTGGAACTATTAGCTGTTTTGCAAATAAG | + |
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Preference number: 2 (lower is better) Translates to: LRASLNPGHLVPDMN*YTYCPGTISCFANK Trigger: CTTATTTGCAAAACAGCTAATAGTTCCAGGGCAGTAAGTGTACAAGTTCATATCTGGTACAAGATGTCCAGGATTCAAGGAGGCTCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR-3UTR TCA 90 bp | AGCTTTTTGACTACCCTACAGGTTCGATTTTGTTGCTTTAGAGATTGGCAGCATCAGAAAGATCGAGAGTaGAATTTCCAGAAACTATCT | + |
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Preference number: 2 (lower is better) Translates to: SFLTTLQVRFCCFRDWQHQKDRE*NFQKLS Trigger: AGATAGTTTCTGGAAATTTCACTCTCGATCTTTCTG...ATGCTGCCAATCTCTAAAGCAACAAAATCGAACCTGTAGGGTAGTCAAAAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR-3UTR CCA 90 bp | TATTCGGTGGAATTTTCCAGCATGAGCTTTTTGACTACCCTACAGGTTCGATTTTCTATGTTCTCACTCTaGAGATCATTCCAGTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: YSVEFSSMSFLTTLQVRFSMFSL*RSFQFS Trigger: ACTAAACTGGAATGATCTCCAGAGTGAGAACATAGA...AAATCGAACCTGTAGGGTAGTCAAAAAGCTCATGCTGGAAAATTCCACCGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR-3UTR CCA 90 bp | TCAATCTCAATTTCTTACCCTGTGGTCTCAACAGCATTGATATATATTTCCATGTTCAGATACTGTGCCTaGGGACAATCTTTCTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: SISISYPVVSTALIYISMFRYCA*GQSFFK Trigger: CTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAA...CATGGAAATATATATCAATGCTGTTGAGACCACAGGGTAAGAAATTGAGATTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR TCA 72 bp | GAGAGTGTTTATTCACCATGTCATGTTCACAACTGCTaGTGGGCTGCCCAATCAGGTTTGTGTGGGCATCCT | + |
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Preference number: 3 (lower is better) Translates to: ESVYSPCHVHNC*WAAQSGLCGHP Trigger: AGGATGCCCACACAAACCTGATTGGGCAGCCCATCAGCAGTTGTGAACATGACATGGTGAATAAACACTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR-3UTR CAA 90 bp | CAATCAGGTTTGTGTGGGCATCCTGATAGTAGTGCCAGGGTAAGTCCCAGAGCATCCCTTCAAGTTGGCTaGTATAACCCTTTGACAGAA | + |
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Preference number: 3 (lower is better) Translates to: QSGLCGHPDSSARVSPRASLQVG*YNPLTE Trigger: TTCTGTCAAAGGGTTATACAAGCCAACTTGAAGGGA...TGCTCTGGGACTTACCCTGGCACTACTATCAGGATGCCCACACAAACCTGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR TCA 72 bp | AGTCCCAGAGCAAATTTTAGAGATATCCAATGGATCTaGAACAGGGTGCTGTCAGGCTACACTTGTACACAG | + |
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Preference number: 3 (lower is better) Translates to: SPRANFRDIQWI*NRVLSGYTCTQ Trigger: CTGTGTACAAGTGTAGCCTGACAGCACCCTGTTTCAGATCCATTGGATATCTCTAAAATTTGCTCTGGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR GCA 72 bp | CAAATTTTAGAGATATCCAATGGATCTGAAACAGGGTaGTGTCAGGCTACACTTGTACACAGATGGCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QILEISNGSETG*CQATLVHRWLA Trigger: AGCCAGCCATCTGTGTACAAGTGTAGCCTGACAGCACCCTGTTTCAGATCCATTGGATATCTCTAAAATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR TCA 72 bp | TGTAGAAATCCCTTCAAGTTGGCTTGTATAACCCTTTaGCAGAATCCCAAGTCTTTAAGAGCCTCCTTGAAT | + |
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Preference number: 3 (lower is better) Translates to: CRNPFKLACITL*QNPKSLRASLN Trigger: ATTCAAGGAGGCTCTTAAAGACTTGGGATTCTGTCAAAGGGTTATACAAGCCAACTTGAAGGGATTTCTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR CCA 72 bp | ACAGAATCCCAAGTCTTTAAGAGCCTCCTTGAATCCTaGACATCTTGTACCAGATATGAACTTGTACACTTA | + |
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Preference number: 3 (lower is better) Translates to: TESQVFKSLLES*TSCTRYELVHL Trigger: TAAGTGTACAAGTTCATATCTGGTACAAGATGTCCAGGATTCAAGGAGGCTCTTAAAGACTTGGGATTCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR-3UTR CAA 90 bp | ATTTTAGAGATATCCAATGGATCTGAAACAGGGTGCTGTCAGGCTACACTTGTAGTGGTCTCAACAGCATaGATATATATTTCCATGATC | + |
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Preference number: 3 (lower is better) Translates to: ILEISNGSETGCCQATLVVVSTA*IYISMI Trigger: GATCATGGAAATATATATCAATGCTGTTGAGACCAC...TACAAGTGTAGCCTGACAGCACCCTGTTTCAGATCCATTGGATATCTCTAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR TCA 72 bp | TATCAATTTGTCCTGAGAACTGATAATAAAGGGAAGTaGAATCAAGCACTTACCCTGCCTTTCTTGTACAGT | + |
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Preference number: 3 (lower is better) Translates to: YQFVLRTDNKGK*NQALTLPFLYS Trigger: ACTGTACAAGAAAGGCAGGGTAAGTGCTTGATTTCACTTCCCTTTATTATCAGTTCTCAGGACAAATTGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR-3UTR CAA 90 bp | TCAATCTCAATTTCTTACCCTGTGGTCTCAACAGCATTGATATATATTTCCATGCAGAGAATGAAAGACTaGCTCAGTATTTCTCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: SISISYPVVSTALIYISMQRMKD*LSISPK Trigger: CTTTGGAGAAATACTGAGCAAGTCTTTCATTCTCTG...CATGGAAATATATATCAATGCTGTTGAGACCACAGGGTAAGAAATTGAGATTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR GCA 72 bp | TTTTGTTACCCTCAAAATAACCATATAAACTACATGTaGTTTCTATGTTCTCACTCTGGAGATCATTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: FCYPQNNHINYM*FLCSHSGDHSS Trigger: ACTGGAATGATCTCCAGAGTGAGAACATAGAAAGCACATGTAGTTTATATGGTTATTTTGAGGGTAACAAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR GCA 90 bp | AGCTTTTTGACTACCCTACAGGTTCGATTTTGTTGCTTTAGAGATTGGCAGCATGGCCGGCCTCGCCGCTaGACCGTCCGGACAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SFLTTLQVRFCCFRDWQHGRPRR*TVRTAK Trigger: TTTGGCTGTCCGGACGGTGCAGCGGCGAGGCCGGCC...ATGCTGCCAATCTCTAAAGCAACAAAATCGAACCTGTAGGGTAGTCAAAAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR GCA 90 bp | TTATCAACCAATGGTACATATAAGAGTACGGCATGTGCTGGGACAGAGAAAAGAGGCCGGCCTCGCCGCTaGACCGTCCGGACAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LSTNGTYKSTACAGTEKRGRPRR*TVRTAK Trigger: TTTGGCTGTCCGGACGGTGCAGCGGCGAGGCCGGCC...TCTTTTCTCTGTCCCAGCACATGCCGTACTCTTATATGTACCATTGGTTGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| CDS-3UTR GCA 90 bp | TCCCCAGTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTCCAAATGAACATCCAGGGCCCCTaGAACTGGCTTTCTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SPVIQILCLGTIFLQVQMNIQGP*NWLSGQ Trigger: CTGCCCAGAAAGCCAGTTGCAGGGGCCCTGGATGTT...CATTTGGACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCACTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| 3UTR CAA 72 bp | CCAATGGATCTGAAACAGGGTGCTGTCAGGCTACACTaGTACACAGATGGCTGGCTCAGAAATAGCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: PMDLKQGAVRLH*YTDGWLRNSQS Trigger: GCTCTGGCTATTTCTGAGCCAGCCATCTGTGTACAAGTGTAGCCTGACAGCACCCTGTTTCAGATCCATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR TCA 90 bp | CAATCAGGTTTGTGTGGGCATCCTGATAGTAGTGCCAGGGTAAGTCCCAGAGCAAATCATAATCCCCAGTaGTTCAGATACTGTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QSGLCGHPDSSARVSPRANHNPQ*FRYCAW Trigger: CCAGGCACAGTATCTGAATCACTGGGGATTATGATT...TGCTCTGGGACTTACCCTGGCACTACTATCAGGATGCCCACACAAACCTGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR GCA 90 bp | ATCATAATCCCCAGTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTCAACTGCTGATGGGCTaGCCAATCAGGTTTGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: IIIPSDSDTVPGDNLSSSQLLMG*PIRFVW Trigger: CCACACAAACCTGATTGGGCAGCCCATCAGCAGTTG...ACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCACTGGGGATTATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR TCA 90 bp | TATTCGGTGGAATTTTCCAGCATGAGCTTTTTGACTACCCTACAGGTTCGATTTCATGTTCACAACTGCTaGTGGGCTGCCCAATCAGGT | + |
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Preference number: 4 (lower is better) Translates to: YSVEFSSMSFLTTLQVRFHVHNC*WAAQSG Trigger: ACCTGATTGGGCAGCCCATCAGCAGTTGTGAACATG...AAATCGAACCTGTAGGGTAGTCAAAAAGCTCATGCTGGAAAATTCCACCGAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR TCA 90 bp | TCCCCAGTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTCCAAATGAATTCGACAGATTCCTaGAGCATTCTGATTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SPVIQILCLGTIFLQVQMNSTDS*SILILP Trigger: GGGCAGAATCAGAATGCTTCAGGAATCTGTCGAATT...CATTTGGACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCACTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392008.6 |
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| CDS-3UTR CCA 90 bp | AAATATAAGCAACCAATGGGCTGCAGGATAGTTGTACAAAGTGTATCATGTATCCAGGGCCCCTGCAACTaGCTTTCTGGGCAGAACCAT | + |
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Preference number: 4 (lower is better) Translates to: KYKQPMGCRIVVQSVSCIQGPCN*LSGQNH Trigger: ATGGTTCTGCCCAGAAAGCCAGTTGCAGGGGCCCTG...GATACATGATACACTTTGTACAACTATCCTGCAGCCCATTGGTTGCTTATATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| CDS-3UTR CCA 90 bp | TCAATCTCAATTTCTTACCCTGTGGTCTCAACAGCATTGATATATATTTCCATGCAGGGCCCCTGCAACTaGCTTTCTGGGCAGAACCAT | + |
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Preference number: 4 (lower is better) Translates to: SISISYPVVSTALIYISMQGPCN*LSGQNH Trigger: ATGGTTCTGCCCAGAAAGCCAGTTGCAGGGGCCCTG...CATGGAAATATATATCAATGCTGTTGAGACCACAGGGTAAGAAATTGAGATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR CCA 90 bp | ATTTTAGAGATATCCAATGGATCTGAAACAGGGTGCTGTCAGGCTACACTTGTAGCAGAACCATTCTTGTaGTGGAATCAGCTTGCCATC | + |
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Preference number: 4 (lower is better) Translates to: ILEISNGSETGCCQATLVAEPFL*WNQLAI Trigger: GATGGCAAGCTGATTCCACCACAAGAATGGTTCTGC...TACAAGTGTAGCCTGACAGCACCCTGTTTCAGATCCATTGGATATCTCTAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR TCA 90 bp | ATCCCCAGTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTCCAAATATCTTGTACCAGATATaGACTTGTACACTTACTGCC | + |
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Preference number: 4 (lower is better) Translates to: IPSDSDTVPGDNLSSSPNILYQI*TCTLTA Trigger: GGCAGTAAGTGTACAAGTTCATATCTGGTACAAGAT...ATTTGGACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCACTGGGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR GCA 90 bp | ATCATAATCCCCAGTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTAAGCAACCAATGGGCTaGAGGATAGTTGTACAAAGT | + |
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Preference number: 4 (lower is better) Translates to: IIIPSDSDTVPGDNLSSSKQPMG*RIVVQS Trigger: ACTTTGTACAACTATCCTGCAGCCCATTGGTTGCTT...ACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCACTGGGGATTATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| CDS-3UTR GCA 90 bp | AATTATCAACCAATGGTACATATAAGAGTACGGCATGTGCTGGGACAGAGAAAAGGATCTGAAACAGGGTaGTGTCAGGCTACACTTGTA | + |
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Preference number: 4 (lower is better) Translates to: NYQPMVHIRVRHVLGQRKGSETG*CQATLV Trigger: TACAAGTGTAGCCTGACAGCACCCTGTTTCAGATCC...TTTTCTCTGTCCCAGCACATGCCGTACTCTTATATGTACCATTGGTTGATAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR CCA 90 bp | ATCATAATCCCCAGTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTTTCAGATACTGTGCCTaGGGACAATCTTTCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: IIIPSDSDTVPGDNLSSSFRYCA*GQSFFK Trigger: CTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAA...ACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCACTGGGGATTATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| CDS-3UTR TCA 90 bp | AGCTTTTTGACTACCCTACAGGTTCGATTTTGTTGCTTTAGAGATTGGCAGCATCAAAATCATCGGCGATaGTTGAAGTATACGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SFLTTLQVRFCCFRDWQHQNHRR*LKYTLE Trigger: CTCAAGCGTATACTTCAATCATCGCCGATGATTTTG...ATGCTGCCAATCTCTAAAGCAACAAAATCGAACCTGTAGGGTAGTCAAAAAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR TCA 90 bp | GTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTCCAAATGAATCATCAAAATCATCGGCGATaGTTGAAGTATACGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: VIQILCLGTIFLQVQMNHQNHRR*LKYTLE Trigger: CTCAAGCGTATACTTCAATCATCGCCGATGATTTTG...ATGATTCATTTGGACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| CDS-3UTR TCA 90 bp | ATTGTGTCCACAGAAAGATCGAGAGTGAAATTTCCAGAAACTATCTTAGATGAAGATATCCAATGGATCTaGAACAGGGTGCTGTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: IVSTERSRVKFPETILDEDIQWI*NRVLSG Trigger: GCCTGACAGCACCCTGTTTCAGATCCATTGGATATC...TTCATCTAAGATAGTTTCTGGAAATTTCACTCTCGATCTTTCTGTGGACACAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR GCA 90 bp | AGCTTTTTGACTACCCTACAGGTTCGATTTTGTTGCTTTAGAGATTGGCAGCATGTGATTCAGATACTGTaGCTGGGGACAATCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SFLTTLQVRFCCFRDWQHVIQIL*LGTIFL Trigger: AAGAAAGATTGTCCCCAGGCACAGTATCTGAATCAC...ATGCTGCCAATCTCTAAAGCAACAAAATCGAACCTGTAGGGTAGTCAAAAAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR GCA 90 bp | GTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTCCAAATGAATCATAAGCAACCAATGGGCTaGAGGATAGTTGTACAAAGT | + |
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Preference number: 4 (lower is better) Translates to: VIQILCLGTIFLQVQMNHKQPMG*RIVVQS Trigger: ACTTTGTACAACTATCCTGCAGCCCATTGGTTGCTT...ATGATTCATTTGGACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| CDS-3UTR GCA 90 bp | TATTCGGTGGAATTTTCCAGCATGAGCTTTTTGACTACCCTACAGGTTCGATTTATCAAGCACTTACCCTaGCTTTCTTGTACAGTGATG | + |
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Preference number: 4 (lower is better) Translates to: YSVEFSSMSFLTTLQVRFIKHLP*LSCTVM Trigger: CATCACTGTACAAGAAAGGCAGGGTAAGTGCTTGAT...AAATCGAACCTGTAGGGTAGTCAAAAAGCTCATGCTGGAAAATTCCACCGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR CCA 90 bp | AAATATAAGCAACCAATGGGCTGCAGGATAGTTGTACAAAGTGTATCATGTATCGCAGAACCATTCTTGTaGTGGAATCAGCTTGCCATC | + |
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Preference number: 4 (lower is better) Translates to: KYKQPMGCRIVVQSVSCIAEPFL*WNQLAI Trigger: GATGGCAAGCTGATTCCACCACAAGAATGGTTCTGC...GATACATGATACACTTTGTACAACTATCCTGCAGCCCATTGGTTGCTTATATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| CDS-3UTR CCA 90 bp | ACAGAATCCCAAGTCTTTAAGAGCCTCCTTGAATCCTGGACATCTTGTACCAGATCTATGTTCTCACTCTaGAGATCATTCCAGTTTAGT | + |
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Preference number: 4 (lower is better) Translates to: TESQVFKSLLESWTSCTRSMFSL*RSFQFS Trigger: ACTAAACTGGAATGATCTCCAGAGTGAGAACATAGA...TCTGGTACAAGATGTCCAGGATTCAAGGAGGCTCTTAAAGACTTGGGATTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR CCA 90 bp | TTATCAACCAATGGTACATATAAGAGTACGGCATGTGCTGGGACAGAGAAAAGAAGCCTCCTTGAATCCTaGACATCTTGTACCAGATAT | + |
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Preference number: 4 (lower is better) Translates to: LSTNGTYKSTACAGTEKRSLLES*TSCTRY Trigger: ATATCTGGTACAAGATGTCCAGGATTCAAGGAGGCT...TCTTTTCTCTGTCCCAGCACATGCCGTACTCTTATATGTACCATTGGTTGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR TCA 90 bp | AAATATAAGCAACCAATGGGCTGCAGGATAGTTGTACAAAGTGTATCATGTATCAATCATAATCCCCAGTaGTTCAGATACTGTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KYKQPMGCRIVVQSVSCINHNPQ*FRYCAW Trigger: CCAGGCACAGTATCTGAATCACTGGGGATTATGATT...GATACATGATACACTTTGTACAACTATCCTGCAGCCCATTGGTTGCTTATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| CDS-3UTR TCA 90 bp | AAATATAAGCAACCAATGGGCTGCAGGATAGTTGTACAAAGTGTATCATGTATCAGCACAAAGACAGGCTaGTGGATGTACTGGACATAT | + |
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Preference number: 4 (lower is better) Translates to: KYKQPMGCRIVVQSVSCISTKTG*WMYWTY Trigger: ATATGTCCAGTACATCCATCAGCCTGTCTTTGTGCT...GATACATGATACACTTTGTACAACTATCCTGCAGCCCATTGGTTGCTTATATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR GCA 90 bp | AATTATCAACCAATGGTACATATAAGAGTACGGCATGTGCTGGGACAGAGAAAAGTGATTCAGATACTGTaGCTGGGGACAATCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: NYQPMVHIRVRHVLGQRKVIQIL*LGTIFL Trigger: AAGAAAGATTGTCCCCAGGCACAGTATCTGAATCAC...TTTTCTCTGTCCCAGCACATGCCGTACTCTTATATGTACCATTGGTTGATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| CDS-3UTR CCA 90 bp | ATTGTGTCCACAGAAAGATCGAGAGTGAAATTTCCAGAAACTATCTTAGATGAAGAGTACGGCATGTGCTaGGACAGAGAAAAGACAGTT | + |
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Preference number: 4 (lower is better) Translates to: IVSTERSRVKFPETILDEEYGMC*DREKTV Trigger: AACTGTCTTTTCTCTGTCCCAGCACATGCCGTACTC...TTCATCTAAGATAGTTTCTGGAAATTTCACTCTCGATCTTTCTGTGGACACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| 3UTR CAA 72 bp | TCCTTGAATCCTGGACATCTTGTACCAGATATGAACTaGTACACTTACTGCCCTGGAACTATTAGCTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: SLNPGHLVPDMN*YTYCPGTISCF Trigger: AAAACAGCTAATAGTTCCAGGGCAGTAAGTGTACAAGTTCATATCTGGTACAAGATGTCCAGGATTCAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR TCA 90 bp | AATTATCAACCAATGGTACATATAAGAGTACGGCATGTGCTGGGACAGAGAAAAATTCCTGAAGCATTCTaGTTCTGCCCATTACATCAA | + |
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Preference number: 4 (lower is better) Translates to: NYQPMVHIRVRHVLGQRKIPEAF*FCPLHQ Trigger: TTGATGTAATGGGCAGAATCAGAATGCTTCAGGAAT...TTTTCTCTGTCCCAGCACATGCCGTACTCTTATATGTACCATTGGTTGATAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392008.6 |
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| CDS-3UTR GCA 90 bp | AAATATAAGCAACCAATGGGCTGCAGGATAGTTGTACAAAGTGTATCATGTATCGTGGTGGAATCAGCTTaGCATCCTTGTTCTAATATG | + |
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Preference number: 4 (lower is better) Translates to: KYKQPMGCRIVVQSVSCIVVESA*HPCSNM Trigger: CATATTAGAACAAGGATGGCAAGCTGATTCCACCAC...GATACATGATACACTTTGTACAACTATCCTGCAGCCCATTGGTTGCTTATATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| CDS-3UTR GCA 90 bp | AGCTTTTTGACTACCCTACAGGTTCGATTTTGTTGCTTTAGAGATTGGCAGCATTGTTTCATTAAGGGCTaGAAGTACCGTTTTTCTAAC | + |
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Preference number: 4 (lower is better) Translates to: SFLTTLQVRFCCFRDWQHCFIKG*KYRFSN Trigger: GTTAGAAAAACGGTACTTGCAGCCCTTAATGAAACA...ATGCTGCCAATCTCTAAAGCAACAAAATCGAACCTGTAGGGTAGTCAAAAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR CCA 90 bp | TTATCAACCAATGGTACATATAAGAGTACGGCATGTGCTGGGACAGAGAAAAGATGTCTCATTTTTACATaGCCTGTAGAAATCCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LSTNGTYKSTACAGTEKRCLIFT*PVEIPS Trigger: TGAAGGGATTTCTACAGGCCATGTAAAAATGAGACA...TCTTTTCTCTGTCCCAGCACATGCCGTACTCTTATATGTACCATTGGTTGATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR GCA 90 bp | TCAATCTCAATTTCTTACCCTGTGGTCTCAACAGCATTGATATATATTTCCATGGTGGTGGAATCAGCTTaGCATCCTTGTTCTAATATG | + |
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Preference number: 4 (lower is better) Translates to: SISISYPVVSTALIYISMVVESA*HPCSNM Trigger: CATATTAGAACAAGGATGGCAAGCTGATTCCACCAC...CATGGAAATATATATCAATGCTGTTGAGACCACAGGGTAAGAAATTGAGATTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR CCA 90 bp | TTATCAACCAATGGTACATATAAGAGTACGGCATGTGCTGGGACAGAGAAAAGATCATGTAGACAGGAGTaGGAAATATTTACTGTTTAC | + |
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Preference number: 4 (lower is better) Translates to: LSTNGTYKSTACAGTEKRSCRQE*EIFTVY Trigger: GTAAACAGTAAATATTTCCCACTCCTGTCTACATGA...TCTTTTCTCTGTCCCAGCACATGCCGTACTCTTATATGTACCATTGGTTGATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR TCA 90 bp | ATTGTGTCCACAGAAAGATCGAGAGTGAAATTTCCAGAAACTATCTTAGATGAACTGTCACACAGAGAATaGAAGACTTGCTCAGTATTT | + |
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Preference number: 4 (lower is better) Translates to: IVSTERSRVKFPETILDELSHRE*KTCSVF Trigger: AAATACTGAGCAAGTCTTTCATTCTCTGTGTGACAG...TTCATCTAAGATAGTTTCTGGAAATTTCACTCTCGATCTTTCTGTGGACACAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR TCA 90 bp | AAATATAAGCAACCAATGGGCTGCAGGATAGTTGTACAAAGTGTATCATGTATCCAGAAAGATCGAGAGTaGAATTTCCAGAAACTATCT | + |
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Preference number: 4 (lower is better) Translates to: KYKQPMGCRIVVQSVSCIQKDRE*NFQKLS Trigger: AGATAGTTTCTGGAAATTTCACTCTCGATCTTTCTG...GATACATGATACACTTTGTACAACTATCCTGCAGCCCATTGGTTGCTTATATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR TCA 90 bp | TCAATCTCAATTTCTTACCCTGTGGTCTCAACAGCATTGATATATATTTCCATGGATAATAAAGGGAAGTaGAATCAAGCACTTACCCTG | + |
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Preference number: 4 (lower is better) Translates to: SISISYPVVSTALIYISMDNKGK*NQALTL Trigger: CAGGGTAAGTGCTTGATTTCACTTCCCTTTATTATC...CATGGAAATATATATCAATGCTGTTGAGACCACAGGGTAAGAAATTGAGATTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR TCA 90 bp | ATTGTGTCCACAGAAAGATCGAGAGTGAAATTTCCAGAAACTATCTTAGATGAACAAATGCAGAGTAAATaGACTAAGGGCTGTTATAAC | + |
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Preference number: 4 (lower is better) Translates to: IVSTERSRVKFPETILDEQMQSK*TKGCYN Trigger: GTTATAACAGCCCTTAGTTCATTTACTCTGCATTTG...TTCATCTAAGATAGTTTCTGGAAATTTCACTCTCGATCTTTCTGTGGACACAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR CAA 90 bp | ATCCCCAGTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTCCAAATGCTGTCAGGCTACACTaGTACACAGATGGCTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: IPSDSDTVPGDNLSSSPNAVRLH*YTDGWL Trigger: GAGCCAGCCATCTGTGTACAAGTGTAGCCTGACAGC...ATTTGGACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCACTGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR CAA 90 bp | ACAGAATCCCAAGTCTTTAAGAGCCTCCTTGAATCCTGGACATCTTGTACCAGATGGGCAGAACCATTCTaGTGGTGGAATCAGCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: TESQVFKSLLESWTSCTRWAEPF*WWNQLA Trigger: GGCAAGCTGATTCCACCACAAGAATGGTTCTGCCCA...TCTGGTACAAGATGTCCAGGATTCAAGGAGGCTCTTAAAGACTTGGGATTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR CAA 90 bp | CAATCAGGTTTGTGTGGGCATCCTGATAGTAGTGCCAGGGTAAGTCCCAGAGCATCTTTAAGAGCCTCCTaGAATCCTGGACATCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: QSGLCGHPDSSARVSPRASLRAS*NPGHLV Trigger: TACAAGATGTCCAGGATTCAAGGAGGCTCTTAAAGA...TGCTCTGGGACTTACCCTGGCACTACTATCAGGATGCCCACACAAACCTGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR CAA 90 bp | ATCATAATCCCCAGTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTTGGGCAGAACCATTCTaGTGGTGGAATCAGCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: IIIPSDSDTVPGDNLSSSWAEPF*WWNQLA Trigger: GGCAAGCTGATTCCACCACAAGAATGGTTCTGCCCA...ACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCACTGGGGATTATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| CDS-3UTR CAA 90 bp | ATCCCCAGTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTCCAAATGGCACTGTCATTCTCTaGATCACTCTCCTGATCCTC | + |
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Preference number: 5 (lower is better) Translates to: IPSDSDTVPGDNLSSSPNGTVIL*ITLLIL Trigger: GAGGATCAGGAGAGTGATCAAGAGAATGACAGTGCC...ATTTGGACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCACTGGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS TCA 90 bp | AGGGGCTATTATAAGAAACAAATTCGACAGATTCCTGAAGCATTCTaGTTCTGCCCATTACATCAAGCGTCCTCGAGCTCCTGGTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: RGYYKKQIRQIPEAF*FCPLHQASSSSWFS Trigger: CGAGAACCAGGAGCTCGAGGACGCTTGATGTAATGGGCAGAATCAGAATGCTTCAGGAATCTGTCGAATTTGTTTCTTATAATAGCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392008.6 |
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| CDS-3UTR CAA 90 bp | AGCTTTTTGACTACCCTACAGGTTCGATTTTGTTGCTTTAGAGATTGGCAGCATGCTGCCCAATCAGGTTaGTGTGGGCATCCTGATAGT | + |
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Preference number: 5 (lower is better) Translates to: SFLTTLQVRFCCFRDWQHAAQSG*CGHPDS Trigger: ACTATCAGGATGCCCACACAAACCTGATTGGGCAGC...ATGCTGCCAATCTCTAAAGCAACAAAATCGAACCTGTAGGGTAGTCAAAAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR CAA 90 bp | ATCCCCAGTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTCCAAATCTTACCCTGCCTTTCTaGTACAGTGATGAGGTTATT | + |
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Preference number: 5 (lower is better) Translates to: IPSDSDTVPGDNLSSSPNLTLPF*YSDEVI Trigger: AATAACCTCATCACTGTACAAGAAAGGCAGGGTAAG...ATTTGGACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCACTGGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR CAA 90 bp | TCCCCAGTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTCCAAATGATGGAAATGGTCTATTaGTTCCTCAGCTATGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SPVIQILCLGTIFLQVQMMEMVY*FLSYVS Trigger: AGAAACATAGCTGAGGAACAAATAGACCATTTCCAT...CATTTGGACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCACTGGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| CDS-3UTR CAA 90 bp | ATCATAATCCCCAGTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTCAGAGAATGAAAGACTaGCTCAGTATTTCTCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: IIIPSDSDTVPGDNLSSSQRMKD*LSISPK Trigger: CTTTGGAGAAATACTGAGCAAGTCTTTCATTCTCTG...ACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCACTGGGGATTATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354371.7 ENST00000392008.6 |
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| CDS-3UTR CAA 90 bp | AAATATAAGCAACCAATGGGCTGCAGGATAGTTGTACAAAGTGTATCATGTATCTCCAGCATGAGCTTTTaGACTACCCTACAGGTTCGA | + |
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Preference number: 5 (lower is better) Translates to: KYKQPMGCRIVVQSVSCISSMSF*TTLQVR Trigger: TCGAACCTGTAGGGTAGTCAAAAAGCTCATGCTGGA...GATACATGATACACTTTGTACAACTATCCTGCAGCCCATTGGTTGCTTATATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR CAA 90 bp | TGGACATATTTCATGCTCAATCTCAATTTCTTACCCTGTGGTCTCAACAGCATTTCCCTTCAAGTTGGCTaGTATAACCCTTTGACAGAA | + |
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Preference number: 5 (lower is better) Translates to: WTYFMLNLNFLPCGLNSISLQVG*YNPLTE Trigger: TTCTGTCAAAGGGTTATACAAGCCAACTTGAAGGGA...AATGCTGTTGAGACCACAGGGTAAGAAATTGAGATTGAGCATGAAATATGTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR CAA 90 bp | ATCATAATCCCCAGTGATTCAGATACTGTGCCTGGGGACAATCTTTCTTCAAGTGTGGTCTCAACAGCATaGATATATATTTCCATGATC | + |
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Preference number: 5 (lower is better) Translates to: IIIPSDSDTVPGDNLSSSVVSTA*IYISMI Trigger: GATCATGGAAATATATATCAATGCTGTTGAGACCAC...ACTTGAAGAAAGATTGTCCCCAGGCACAGTATCTGAATCACTGGGGATTATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS-3UTR CAA 90 bp | TCAATCTCAATTTCTTACCCTGTGGTCTCAACAGCATTGATATATATTTCCATGATGGAAATGGTCTATTaGTTCCTCAGCTATGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SISISYPVVSTALIYISMMEMVY*FLSYVS Trigger: AGAAACATAGCTGAGGAACAAATAGACCATTTCCAT...CATGGAAATATATATCAATGCTGTTGAGACCACAGGGTAAGAAATTGAGATTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354371.7 |
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| CDS CCA 72 bp | CGTCTCCTTGTTGCATCTATTGTGGGAGTGGTGGGTTaGCAGAGAGTGAACCAGGGAGCAGCATTTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: RLLVASIVGVVG*QRVNQGAAFSK Trigger: CTTTGAAAATGCTGCTCCCTGGTTCACTCTCTGCCAACCCACCACTCCCACAATAGATGCAACAAGGAGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470452.5 |
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