RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COPS7B (Homo sapiens)

Ensembl gene IDs: ENSG00000144524

Ensembl transcript IDs: ENST00000350033.8, ENST00000357490.6, ENST00000373608.7, ENST00000409091.5, ENST00000409295.5, ENST00000410017.5, ENST00000410024.5, ENST00000412591.5, ENST00000412922.6, ENST00000413197.5, ENST00000432387.5, ENST00000436564.5, ENST00000449784.5, ENST00000450501.5, ENST00000452375.5, ENST00000461350.5, ENST00000466901.5, ENST00000479430.5, ENST00000488111.1, ENST00000492423.5, ENST00000611614.4, ENST00000620578.4, ENST00000631349.1

Found 969 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCCAGCCGGCCCTAGTGGCGGCTGGAGACCAGACCTTTCACTTTaGACATCTTCTTGGTGGGCTGCCTCTGCTCAGCGTGAGGGGGAC +
Preference number: 1 (lower is better)
Translates to: APAGPSGGWRPDLSL*TSSWWAASAQREGD
Trigger: GTCCCCCTCACGCTGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGGTCTCCAGCCGCCACTAGGGCCGGCTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR CCA 90 bp AGTGGCGGCTGGAGACCAGACCTTTCACTTTGGACATCTTCTTGGTaGGCTGCCTCTGCTCAGCGTGAGGGGGACACTCCCGTTCAGCCA +
Preference number: 1 (lower is better)
Translates to: SGGWRPDLSLWTSSW*AASAQREGDTPVQP
Trigger: TGGCTGAACGGGAGTGTCCCCCTCACGCTGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGGTCTCCAGCCGCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR CCA 90 bp CCTAGTGGCGGCTGGAGACCAGACCTTTCACTTTGGACATCTTCTTaGTGGGCTGCCTCTGCTCAGCGTGAGGGGGACACTCCCGTTCAG +
Preference number: 1 (lower is better)
Translates to: PSGGWRPDLSLWTSS*WAASAQREGDTPVQ
Trigger: CTGAACGGGAGTGTCCCCCTCACGCTGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGGTCTCCAGCCGCCACTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR TCA 90 bp AAAGCAGCGCATCTTGACGCCTGGCTAGAAATCACTGCACCATCGTaGGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCA +
Preference number: 1 (lower is better)
Translates to: KAAHLDAWLEITAPS*GLWYQGLERSAPSS
Trigger: TGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACGATGGTGCAGTGATTTCTAGCCAGGCGTCAAGATGCGCTGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR CCA 90 bp GGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGAGGGAAGCTaGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTGGAGCCCC +
Preference number: 1 (lower is better)
Translates to: GDKPLHRDKNLLEGS*AVSDPVLGWHWWSP
Trigger: GGGGCTCCACCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR GCA 90 bp CCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTaGAGCCAGGAGGAGTTAAAGATCTTGGGAGAGCAAGCATTAGCC +
Preference number: 1 (lower is better)
Translates to: PSADRGASMPPSLPR*SQEELKILGEQALA
Trigger: GGCTAATGCTTGCTCTCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR GCA 90 bp CTCCCGTTCAGCCAGCTGCTGCTCCATCTCCTGAGCCGAGGAGGATaGGGTGGCTTTGAGTGTCTTCTTGATGTTGGTAACCTCTGCTTC +
Preference number: 1 (lower is better)
Translates to: LPFSQLLLHLLSRGG*GGFECLLDVGNLCF
Trigger: GAAGCAGAGGTTACCAACATCAAGAAGACACTCAAAGCCACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCAGCTGGCTGAACGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR CCA 90 bp ACAAGAACCTCCTGGAGGGAAGCTGGGCAGTGTCTGACCCTGTTTTaGGATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGG +
Preference number: 1 (lower is better)
Translates to: TRTSWREAGQCLTLF*DGIGGAPESEGNNW
Trigger: CCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR TCA 90 bp CTTACACAGAGACAAGAACCTCCTGGAGGGAAGCTGGGCAGTGTCTaGCCCTGTTTTGGGATGGCATTGGTGGAGCCCCTGAGTCTGAAG +
Preference number: 1 (lower is better)
Translates to: LTQRQEPPGGKLGSV*PCFGMALVEPLSLK
Trigger: CTTCAGACTCAGGGGCTCCACCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTCTGTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR TCA 90 bp AGCTGCCAACAAGGGATGAGGCAGGAGAGGGAAAGCAGCGCATCTTaGCGCCTGGCTAGAAATCACTGCACCATCGTGAGGACTGTGGTA +
Preference number: 1 (lower is better)
Translates to: SCQQGMRQERESSAS*RLARNHCTIVRTVV
Trigger: TACCACAGTCCTCACGATGGTGCAGTGATTTCTAGCCAGGCGTCAAGATGCGCTGCTTTCCCTCTCCTGCCTCATCCCTTGTTGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR CCA 90 bp GATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCTaGCAGGCTCTCCTTGTTGGCTCAAGTGATCTGCCTGCCTCGGCC +
Preference number: 1 (lower is better)
Translates to: DGKMLQLVLLSCAQF*QALLVGSSDLPASA
Trigger: GGCCGAGGCAGGCAGATCACTTGAGCCAACAAGGAGAGCCTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436564.5
3UTR CCA 90 bp GGAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTaGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAG +
Preference number: 1 (lower is better)
Translates to: GVKDLGRASISRQFQ*AAGAYTPKTRLSSQ
Trigger: CTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR TCA 90 bp CCAGCGCTCTCAACTAATTGGAGATCGGAGCTGGGCTTAAGAGGCTaGAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCT +
Preference number: 1 (lower is better)
Translates to: PALSTNWRSELGLRG*KPVGLVNTAQHHVP
Trigger: AGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCTCTTAAGCCCAGCTCCGATCTCCAATTAGTTGAGAGCGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR CCA 90 bp AAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTaGAGGGAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATT +
Preference number: 1 (lower is better)
Translates to: KTGRETSPYTETRTS*REAGQCLTLFWDGI
Trigger: AATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR TCA 90 bp CTTGATGCCAAGCTCACGATGGTAAGATGCTTCAGCTTGTTCTGCTaGGCTGTGCTCAGTTCTGGCAGGCTCTCCTTGTTGGCTCAAGTG +
Preference number: 1 (lower is better)
Translates to: LDAKLTMVRCFSLFC*AVLSSGRLSLLAQV
Trigger: CACTTGAGCCAACAAGGAGAGCCTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATCGTGAGCTTGGCATCAAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436564.5
3UTR CCA 90 bp CTTCTACCTGCTGCTGAGTTCGGTTGTGGTTCTCTTTGTACTGGTTaGCTCTCAGAACTTGCTGCTCGATGCCCAGTAGAACTGCTTCAC +
Preference number: 1 (lower is better)
Translates to: LLPAAEFGCGSLCTG*LSELAARCPVELLH
Trigger: GTGAAGCAGTTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCACAACCGAACTCAGCAGCAGGTAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR GCA 90 bp GTTCGGTTGTGGTTCTCTTTGTACTGGTTGGCTCTCAGAACTTGCTaGTCGATGCCCAGTAGAACTGCTTCACAGCCATCACACCATTCA +
Preference number: 1 (lower is better)
Translates to: VRLWFSLYWLALRTC*SMPSRTASQPSHHS
Trigger: TGAATGGTGTGATGGCTGTGAAGCAGTTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCACAACCGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR CCA 90 bp AGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTaGTTGTTGTTGTTGTTGTTGTTGTTTAAATCACAAACGTGGGCC +
Preference number: 1 (lower is better)
Translates to: SHCSAWNFSAVNYVN*LLLLLLLFKSQTWA
Trigger: GGCCCACGTTTGTGATTTAAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
3UTR-3UTR TCA 90 bp ATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGGTGGGGAGGCGCTGGTaGGGGGACGGGCAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: ITSLHGLNWSCQQGMRQEVGRRW*GDGQVW
Trigger: CCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCAC...CTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp CAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGTGGGGAGGCGCTGGTaGGGGGACGGGCAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: QQVLQQTEGHRCHHPYPGVGRRW*GDGQVW
Trigger: CCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCAC...ACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp CCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGAGGGAAAGTGTCCCCTCCCCACCTaGCCCAGGCCTGGTGAGTGC +
Preference number: 2 (lower is better)
Translates to: PPRPELELPTRDEAGEGKCPLPT*PRPGEC
Trigger: GCACTCACCAGGCCTGGGTCAGGTGGGGAGGGGACA...CTTTCCCTCTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp GCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGTGGGGAGGCGCTGGTaGGGGGACGGGCAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: AAGAYTPKTRLSSQRQQEVGRRW*GDGQVW
Trigger: CCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCAC...TTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACGTGGGGAGGCGCTGGTaGGGGGACGGGCAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDVGRRW*GDGQVW
Trigger: CCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCAC...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGTGCTGCTCCATCTCCTaGGCCGAGGAGGATGCGGTG +
Preference number: 2 (lower is better)
Translates to: SADRGASMPPSLPRCSQECCSIS*AEEDAV
Trigger: CACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCA...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp AGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGATGTGGTACCAGGGGCTaGAGAGGAGTGCCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: SRQRGIDATIPTQVQPGGCGTRG*RGVPPP
Trigger: AGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACA...TCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp ACACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGTGTGGTACCAGGGGCTaGAGAGGAGTGCCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: TQPSITSLHGLNWSCQQGCGTRG*RGVPPP
Trigger: AGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACA...CCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGCTCCACGGCCTGAACTaGAGCTGCCAACAAGGGATG +
Preference number: 2 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGLHGLN*SCQQGM
Trigger: CATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAG...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAAGCCGGCAGTTCCAGTaGGCAGCTGGGGCCTACACA +
Preference number: 2 (lower is better)
Translates to: SRQRGIDATIPTQVQPGGSRQFQ*AAGAYT
Trigger: TGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCT...TCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGTGGGGAGGCGCTGGTaGGGGGACGGGCAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: ELKILGEQALAGSSSGQLVGRRW*GDGQVW
Trigger: CCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCAC...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGATCACTGCACCATCGTaGGGACTGTGGTACCAGGGG +
Preference number: 2 (lower is better)
Translates to: ADRGASMPPSLPRCSQEEITAPS*GLWYQG
Trigger: CCCCTGGTACCACAGTCCTCACGATGGTGCAGTGAT...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGCCAGCTTGCCCTGGATaGTGTCAGTGTAGACAGCCT +
Preference number: 2 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGPACPG*CQCRQP
Trigger: AGGCTGTCTACACTGACATCATCCAGGGCAAGCTGG...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413197.5
3UTR-3UTR CCA 90 bp AGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAAGAGAGGGGAGGAAATaGGCCCTTGGTGTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: SRQRGIDATIPTQVQPGGREGRK*ALGVPS
Trigger: GGAGGGGACACCAAGGGCCCATTTCCTCCCCTCTCT...TCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGGGGACGGGCAGGTCTaGAACTCACTGCAGGTAGAG +
Preference number: 2 (lower is better)
Translates to: SRQRGIDATIPTQVQPGGGDGQV*NSLQVE
Trigger: CTCTACCTGCAGTGAGTTCCAGACCTGCCCGTCCCC...TCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp ATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGACAGTACCAACAGGGTaGGGAGGCGCTGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: ITSLHGLNWSCQQGMRQETVPTG*GGAGEG
Trigger: CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGT...CTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACACAGTACCAACAGGGTaGGGAGGCGCTGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHTVPTG*GGAGEG
Trigger: CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGT...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GTGGCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACTGTGGTACCAGGGGCTaGAGAGGAGTGCCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: VARRERQAGRNHFCHPADCGTRG*RGVPPP
Trigger: AGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACA...GTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGAGGCAGCAGGAAGAGTaGCCAGGAGAGAACGCCAAG +
Preference number: 2 (lower is better)
Translates to: ADRGASMPPSLPRCSQEERQQEE*PGENAK
Trigger: CTTGGCGTTCTCTCCTGGCCACTCTTCCTGCTGCCT...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGAGCCGGCAGTTCCAGTaGGCAGCTGGGGCCTACACA +
Preference number: 2 (lower is better)
Translates to: RSFSRQRGIDATIPTQVQSRQFQ*AAGAYT
Trigger: TGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCT...CTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGTGTCCCCTCCCCACCTaGCCCAGGCCTGGTGAGTGC +
Preference number: 2 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGCPLPT*PRPGEC
Trigger: GCACTCACCAGGCCTGGGTCAGGTGGGGAGGGGACA...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACTGTCCCCTCCCCACCTaGCCCAGGCCTGGTGAGTGC +
Preference number: 2 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDCPLPT*PRPGEC
Trigger: GCACTCACCAGGCCTGGGTCAGGTGGGGAGGGGACA...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp ATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCAACCGTGGGGAGGCGCTGGTaGGGGGACGGGCAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: IFLNHPNPSPSRSTRYATVGRRW*GDGQVW
Trigger: CCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCAC...GGTTGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp ACACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATCACTGCACCATCGTaGGGACTGTGGTACCAGGGG +
Preference number: 2 (lower is better)
Translates to: TQPSITSLHGLNWSCQQGITAPS*GLWYQG
Trigger: CCCCTGGTACCACAGTCCTCACGATGGTGCAGTGAT...CCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGATCACTGCACCATCGTaGGGACTGTGGTACCAGGGG +
Preference number: 2 (lower is better)
Translates to: SADRGASMPPSLPRCSQEITAPS*GLWYQG
Trigger: CCCCTGGTACCACAGTCCTCACGATGGTGCAGTGAT...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGGAAAGCAGCGCATCTTaGCGCCTGGCTAGAAATCAC +
Preference number: 2 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGESSAS*RLARNH
Trigger: GTGATTTCTAGCCAGGCGTCAAGATGCGCTGCTTTC...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGCACCGAAAACAAGGCTaGGTAGTCAGAGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: ADRGASMPPSLPRCSQEEHRKQG*VVRGSR
Trigger: CCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTG...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp GGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGGGAAGGAACCATTTCTaGCACCCAGCAGACCCACAG +
Preference number: 2 (lower is better)
Translates to: GRASISRQFQWAAGAYTPGRNHF*HPADPQ
Trigger: CTGTGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCC...CGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp TCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGGGACGGGCAGGTCTaGAACTCACTGCAGGTAGAG +
Preference number: 2 (lower is better)
Translates to: SFSRQRGIDATIPTQVQPGDGQV*NSLQVE
Trigger: CTCTACCTGCAGTGAGTTCCAGACCTGCCCGTCCCC...TGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACCCAGGGGACGGGCAGGTCTaGAACTCACTGCAGGTAGAG +
Preference number: 2 (lower is better)
Translates to: ARRERQAGRNHFCHPADPGDGQV*NSLQVE
Trigger: CTCTACCTGCAGTGAGTTCCAGACCTGCCCGTCCCC...TGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGTGTCTGACCCTGTTTTaGGATGGCATTGGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGCLTLF*DGIGGA
Trigger: GGCTCCACCAATGCCATCCCAAAACAGGGTCAGACA...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGCTCCTGGAGGGAAGCTaGGCAGTGTCTGACCCTGTT +
Preference number: 2 (lower is better)
Translates to: SADRGASMPPSLPRCSQELLEGS*AVSDPV
Trigger: AACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAG...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGGAGACAAGAACCTCCTaGAGGGAAGCTGGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: GRASISRQFQWAAGAYTPETRTS*REAGQC
Trigger: ACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTC...CGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGCTCCACGGCCTGAACTaGAGCTGCCAACAAGGGATG +
Preference number: 2 (lower is better)
Translates to: SADRGASMPPSLPRCSQELHGLN*SCQQGM
Trigger: CATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAG...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGTCCACTTCCAGCAGCTaGTTTCGCTGGTCCAGCTTG +
Preference number: 2 (lower is better)
Translates to: GRASISRQFQWAAGAYTPSTSSS*FRWSSL
Trigger: CAAGCTGGACCAGCGAAACCAGCTGCTGGAAGTGGA...CGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR TCA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGTGTCCCCTCCCCACCTaGCCCAGGCCTGGTGAGTGC +
Preference number: 2 (lower is better)
Translates to: ELKILGEQALAGSSSGQLCPLPT*PRPGEC
Trigger: GCACTCACCAGGCCTGGGTCAGGTGGGGAGGGGACA...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGAAGCTGGGCAGTGTCTaGCCCTGTTTTGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: SADRGASMPPSLPRCSQEKLGSV*PCFGMA
Trigger: TGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTT...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp GTGGCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACATCACTGCACCATCGTaGGGACTGTGGTACCAGGGG +
Preference number: 2 (lower is better)
Translates to: VARRERQAGRNHFCHPADITAPS*GLWYQG
Trigger: CCCCTGGTACCACAGTCCTCACGATGGTGCAGTGAT...GTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGGAAAGCAGCGCATCTTaGCGCCTGGCTAGAAATCAC +
Preference number: 2 (lower is better)
Translates to: ADRGASMPPSLPRCSQEEESSAS*RLARNH
Trigger: GTGATTTCTAGCCAGGCGTCAAGATGCGCTGCTTTC...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGCACCGAAAACAAGGCTaGGTAGTCAGAGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: SADRGASMPPSLPRCSQEHRKQG*VVRGSR
Trigger: CCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTG...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGCTGGCTAGAAATCACTaGACCATCGTGAGGACTGTG +
Preference number: 2 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGLARNH*TIVRTV
Trigger: CACAGTCCTCACGATGGTGCAGTGATTTCTAGCCAG...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp ACACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGTCTGAAGGGAACAACTaGGGAAGGAGGGAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: TQPSITSLHGLNWSCQQGSEGNN*GRREWV
Trigger: CACCCACTCCCTCCTTCCCCAGTTGTTCCCTTCAGA...CCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp CCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGAGGGAAAGCTCCTGGAGGGAAGCTaGGCAGTGTCTGACCCTGTT +
Preference number: 2 (lower is better)
Translates to: PPRPELELPTRDEAGEGKLLEGS*AVSDPV
Trigger: AACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAG...CTTTCCCTCTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGAGAGACAAGAACCTCCTaGAGGGAAGCTGGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: GEQALAGSSSGQLGPTHRETRTS*REAGQC
Trigger: ACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTC...TCGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGATCATCCCTGGGGGCTaGTTAAAGCTGCCTCCGGCT +
Preference number: 2 (lower is better)
Translates to: ATGPSADRGASMPPSLPRIIPGG*LKLPPA
Trigger: AGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGAT...CCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp ATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGATCATCCCTGGGGGCTaGTTAAAGCTGCCTCCGGCT +
Preference number: 2 (lower is better)
Translates to: ITSLHGLNWSCQQGMRQEIIPGG*LKLPPA
Trigger: AGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGAT...CTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp ACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATATCATCCCTGGGGGCTaGTTAAAGCTGCCTCCGGCT +
Preference number: 2 (lower is better)
Translates to: TAQHHVPPRPELELPTRDIIPGG*LKLPPA
Trigger: AGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGAT...ATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AACCTCCTGGAGGGAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTGTGGTACCAGGGGCTaGAGAGGAGTGCCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: NLLEGSWAVSDPVLGWHWCGTRG*RGVPPP
Trigger: AGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACA...CCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAATGTGGTACCAGGGGCTaGAGAGGAGTGCCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: AAGAYTPKTRLSSQRQQECGTRG*RGVPPP
Trigger: AGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACA...TTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGAGGCAGCAGGAAGAGTaGCCAGGAGAGAACGCCAAG +
Preference number: 2 (lower is better)
Translates to: RSFSRQRGIDATIPTQVQRQQEE*PGENAK
Trigger: CTTGGCGTTCTCTCCTGGCCACTCTTCCTGCTGCCT...CTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGGTTCCAGTGGGCAGCTaGGGCCTACACACCGAAAAC +
Preference number: 2 (lower is better)
Translates to: RSFSRQRGIDATIPTQVQVPVGS*GLHTEN
Trigger: GTTTTCGGTGTGTAGGCCCCAGCTGCCCACTGGAAC...CTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGGTTCCAGTGGGCAGCTaGGGCCTACACACCGAAAAC +
Preference number: 2 (lower is better)
Translates to: ATGPSADRGASMPPSLPRVPVGS*GLHTEN
Trigger: GTTTTCGGTGTGTAGGCCCCAGCTGCCCACTGGAAC...CCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAAGCCGGCAGTTCCAGTaGGCAGCTGGGGCCTACACA +
Preference number: 2 (lower is better)
Translates to: AAGAYTPKTRLSSQRQQESRQFQ*AAGAYT
Trigger: TGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCT...TTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGAATCATCAGAGGGCTCTaGGTCATCAGCCAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: GEQALAGSSSGQLGPTHRIIRGL*VISQGG
Trigger: CCCTCCTTGGCTGATGACCCAGAGCCCTCTGATGAT...TCGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACCCAAGCAGCTGGTTTCGCTaGTCCAGCTTGCCCTGGATG +
Preference number: 2 (lower is better)
Translates to: ARRERQAGRNHFCHPADPSSWFR*SSLPWM
Trigger: CATCCAGGGCAAGCTGGACCAGCGAAACCAGCTGCT...TGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp ACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATAGCAGCTGGTTTCGCTaGTCCAGCTTGCCCTGGATG +
Preference number: 2 (lower is better)
Translates to: TAQHHVPPRPELELPTRDSSWFR*SSLPWM
Trigger: CATCCAGGGCAAGCTGGACCAGCGAAACCAGCTGCT...ATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR CAA 90 bp ATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTaGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: MPPSLPRCSQEELKI*GEQALAGSSSGQLG
Trigger: CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACAAGCTGGGCAGTGTCTaGCCCTGTTTTGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHKLGSV*PCFGMA
Trigger: TGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTT...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp GCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGAAGCTGGGCAGTGTCTaGCCCTGTTTTGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: ATGPSADRGASMPPSLPRKLGSV*PCFGMA
Trigger: TGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTT...CCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp GGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCGGCCTGAACTGGAGCTaGCAACAAGGGATGAGGCAG +
Preference number: 2 (lower is better)
Translates to: GASMPPSLPRCSQEELKIGLNWS*QQGMRQ
Trigger: CTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCC...GATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp GCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGGGAAGGAACCATTTCTaGCACCCAGCAGACCCACAG +
Preference number: 2 (lower is better)
Translates to: ATGPSADRGASMPPSLPRGRNHF*HPADPQ
Trigger: CTGTGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCC...CCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTGGCTCTCAGAACTTaGTGCTCGATGCCCAGTAGA +
Preference number: 2 (lower is better)
Translates to: ADRGASMPPSLPRCSQEELALRT*CSMPSR
Trigger: TCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAA...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR GCA 90 bp GCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGCTGAGCCGAGGAGGATaGGGTGGCTTTGAGTGTCTT +
Preference number: 2 (lower is better)
Translates to: ATGPSADRGASMPPSLPRLSRGG*GGFECL
Trigger: AAGACACTCAAAGCCACCGCATCCTCCTCGGCTCAG...CCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR GCA 90 bp ATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGCTGAGCCGAGGAGGATaGGGTGGCTTTGAGTGTCTT +
Preference number: 2 (lower is better)
Translates to: ITSLHGLNWSCQQGMRQELSRGG*GGFECL
Trigger: AAGACACTCAAAGCCACCGCATCCTCCTCGGCTCAG...CTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp AGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTGGGGACGGGCAGGTCTaGAACTCACTGCAGGTAGAG +
Preference number: 2 (lower is better)
Translates to: RSSNRSFSRQRGIDATIPGDGQV*NSLQVE
Trigger: CTCTACCTGCAGTGAGTTCCAGACCTGCCCGTCCCC...AGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp ACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCACAGTACCAACAGGGTaGGGAGGCGCTGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: TAPSVCAQIPEVSQPSALTVPTG*GGAGEG
Trigger: CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGT...GAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGATGTCTGACCCTGTTTTaGGATGGCATTGGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: GEQALAGSSSGQLGPTHRCLTLF*DGIGGA
Trigger: GGCTCCACCAATGCCATCCCAAAACAGGGTCAGACA...TCGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGATCATCCCTGGGGGCTaGTTAAAGCTGCCTCCGGCT +
Preference number: 2 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQIIPGG*LKLPPA
Trigger: AGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGAT...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGCTTCACAATCATCCCTaGGGGCTGGTTAAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: SADRGASMPPSLPRCSQELHNHP*GLVKAA
Trigger: GGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAAG...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGCGCATCTTGACGCCTaGCTAGAAATCACTGCACCA +
Preference number: 2 (lower is better)
Translates to: SADRGASMPPSLPRCSQEAHLDA*LEITAP
Trigger: TGGTGCAGTGATTTCTAGCCAGGCGTCAAGATGCGC...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp ACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATTGGACATCTTCTTGGTaGGCTGCCTCTGCTCAGCGT +
Preference number: 2 (lower is better)
Translates to: TAQHHVPPRPELELPTRDWTSSW*AASAQR
Trigger: ACGCTGAGCAGAGGCAGCCCACCAAGAAGATGTCCA...ATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR TCA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGAAGCTGGGCAGTGTCTaGCCCTGTTTTGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQKLGSV*PCFGMA
Trigger: TGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTT...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp AACCTCCTGGAGGGAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGATCACTGCACCATCGTaGGGACTGTGGTACCAGGGG +
Preference number: 2 (lower is better)
Translates to: NLLEGSWAVSDPVLGWHWITAPS*GLWYQG
Trigger: CCCCTGGTACCACAGTCCTCACGATGGTGCAGTGAT...CCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp GTGGCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACGAAAGCAGCGCATCTTaGCGCCTGGCTAGAAATCAC +
Preference number: 2 (lower is better)
Translates to: VARRERQAGRNHFCHPADESSAS*RLARNH
Trigger: GTGATTTCTAGCCAGGCGTCAAGATGCGCTGCTTTC...GTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACTCAGCCAAGGAGGGGTaGAAAGACAGAAGCAGCAAC +
Preference number: 2 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHSAKEG*KDRSSN
Trigger: GTTGCTGCTTCTGTCTTTTCACCCCTCCTTGGCTGA...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp GCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACCCAGCTTCTACCTGCTGCTaGGTTCGGTTGTGGTTCTCT +
Preference number: 2 (lower is better)
Translates to: ARRERQAGRNHFCHPADPASTCC*VRLWFS
Trigger: AGAGAACCACAACCGAACTCAGCAGCAGGTAGAAGC...TGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR GCA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGGGCCTGAACTGGAGCTaGCAACAAGGGATGAGGCAG +
Preference number: 2 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEEGLNWS*QQGMRQ
Trigger: CTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCC...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGAGAGAGGGGAGGAAATaGGCCCTTGGTGTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRREGRK*ALGVPS
Trigger: GGAGGGGACACCAAGGGCCCATTTCCTCCCCTCTCT...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGGGGACGGGCAGGTCTaGAACTCACTGCAGGTAGAG +
Preference number: 2 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGGDGQV*NSLQVE
Trigger: CTCTACCTGCAGTGAGTTCCAGACCTGCCCGTCCCC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
58% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp ATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGTGTCTGACCCTGTTTTaGGATGGCATTGGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: ITSLHGLNWSCQQGMRQECLTLF*DGIGGA
Trigger: GGCTCCACCAATGCCATCCCAAAACAGGGTCAGACA...CTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp TCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCACTTCACAATCATCCCTaGGGGCTGGTTAAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: SFSRQRGIDATIPTQVQPLHNHP*GLVKAA
Trigger: GGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAAG...TGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCTTCACAATCATCCCTaGGGGCTGGTTAAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: RSFSRQRGIDATIPTQVQLHNHP*GLVKAA
Trigger: GGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAAG...CTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGTGTGGTACCAGGGGCTaGAGAGGAGTGCCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: ELKILGEQALAGSSSGQLCGTRG*RGVPPP
Trigger: AGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACA...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp ACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGCGCATCTTGACGCCTaGCTAGAAATCACTGCACCA +
Preference number: 2 (lower is better)
Translates to: TAQHHVPPRPELELPTRDAHLDA*LEITAP
Trigger: TGGTGCAGTGATTTCTAGCCAGGCGTCAAGATGCGC...ATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGAGCGCTCTCAACTAATTaGAGATCGGAGCTGGGCTTA +
Preference number: 2 (lower is better)
Translates to: GEQALAGSSSGQLGPTHRALSTN*RSELGL
Trigger: TAAGCCCAGCTCCGATCTCCAATTAGTTGAGAGCGC...TCGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGGGAGTCCACTTCCAGCAGCTaGTTTCGCTGGTCCAGCTTG +
Preference number: 2 (lower is better)
Translates to: DGIGGAPESEGNNWGRRESTSSS*FRWSSL
Trigger: CAAGCTGGACCAGCGAAACCAGCTGCTGGAAGTGGA...CTCCCTCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGTGGACATCTTCTTGGTaGGCTGCCTCTGCTCAGCGT +
Preference number: 2 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQWTSSW*AASAQR
Trigger: ACGCTGAGCAGAGGCAGCCCACCAAGAAGATGTCCA...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp ACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATCTTTGGACATCTTCTTaGTGGGCTGCCTCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: TAQHHVPPRPELELPTRDLWTSS*WAASAQ
Trigger: CTGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAG...ATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp GTGGCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACCTTTGGACATCTTCTTaGTGGGCTGCCTCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: VARRERQAGRNHFCHPADLWTSS*WAASAQ
Trigger: CTGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAG...GTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR TCA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCTGGGCTTAAGAGGCTaGAAACCCGTGGGTTTAGTA +
Preference number: 2 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHLGLRG*KPVGLV
Trigger: TACTAAACCCACGGGTTTTCAGCCTCTTAAGCCCAG...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp CAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTTCAGCCAAGGAGGGGTaGAAAGACAGAAGCAGCAAC +
Preference number: 2 (lower is better)
Translates to: QQVLQQTEGHRCHHPYPGSAKEG*KDRSSN
Trigger: GTTGCTGCTTCTGTCTTTTCACCCCTCCTTGGCTGA...ACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp AGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCTGGCTAGAAATCACTaGACCATCGTGAGGACTGTG +
Preference number: 2 (lower is better)
Translates to: RSFSRQRGIDATIPTQVQLARNH*TIVRTV
Trigger: CACAGTCCTCACGATGGTGCAGTGATTTCTAGCCAG...CTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp TTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGGGCCTGAACTGGAGCTaGCAACAAGGGATGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LKILGEQALAGSSSGQLGGLNWS*QQGMRQ
Trigger: CTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCC...CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp TCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTTGGGAGGCCTGAACTGGAGCTaGCAACAAGGGATGAGGCAG +
Preference number: 2 (lower is better)
Translates to: SMPPSLPRCSQEELKILGGLNWS*QQGMRQ
Trigger: CTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCC...TCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp CCACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCGGAAGGAACCATTTCTaGCACCCAGCAGACCCACAG +
Preference number: 2 (lower is better)
Translates to: PQHPLSVLRYQRLVNPALGRNHF*HPADPQ
Trigger: CTGTGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCC...GAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp ACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGGATGTCACGGCCAATaGAGAAATCCACTTCCAGCA +
Preference number: 2 (lower is better)
Translates to: TAQHHVPPRPELELPTRDGCHGQ*RNPLPA
Trigger: TGCTGGAAGTGGATTTCTGCATTGGCCGTGACATCC...ATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR GCA 90 bp ACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGCTCTCAGAACTTGCTaGTCGATGCCCAGTAGAACT +
Preference number: 2 (lower is better)
Translates to: TAQHHVPPRPELELPTRDALRTC*SMPSRT
Trigger: AGTTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGC...ATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp TTCACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTAGAGAGGGGAGGAAATaGGCCCTTGGTGTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: FTIIPGGWLKLPPAYNQPREGRK*ALGVPS
Trigger: GGAGGGGACACCAAGGGCCCATTTCCTCCCCTCTCT...AGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGGAGACAAGAACCTCCTaGAGGGAAGCTGGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEEETRTS*REAGQC
Trigger: ACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTC...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp CAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCGCATCTTGACGCCTaGCTAGAAATCACTGCACCA +
Preference number: 2 (lower is better)
Translates to: QQVLQQTEGHRCHHPYPGAHLDA*LEITAP
Trigger: TGGTGCAGTGATTTCTAGCCAGGCGTCAAGATGCGC...ACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCTCCACGGCCTGAACTaGAGCTGCCAACAAGGGATG +
Preference number: 2 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHLHGLN*SCQQGM
Trigger: CATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAG...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGGCGCTCTCAACTAATTaGAGATCGGAGCTGGGCTTA +
Preference number: 2 (lower is better)
Translates to: ATGPSADRGASMPPSLPRALSTN*RSELGL
Trigger: TAAGCCCAGCTCCGATCTCCAATTAGTTGAGAGCGC...CCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACGCGCTCTCAACTAATTaGAGATCGGAGCTGGGCTTA +
Preference number: 2 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHALSTN*RSELGL
Trigger: TAAGCCCAGCTCCGATCTCCAATTAGTTGAGAGCGC...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp TTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGAAGCTGGGCAGTGTCTaGCCCTGTTTTGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: LKILGEQALAGSSSGQLGKLGSV*PCFGMA
Trigger: TGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTT...CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACAAGCTGGGCAGTGTCTaGCCCTGTTTTGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDKLGSV*PCFGMA
Trigger: TGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTT...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp CCACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCGAAAGCAGCGCATCTTaGCGCCTGGCTAGAAATCAC +
Preference number: 2 (lower is better)
Translates to: PQHPLSVLRYQRLVNPALESSAS*RLARNH
Trigger: GTGATTTCTAGCCAGGCGTCAAGATGCGCTGCTTTC...GAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGCTGGGCTTAAGAGGCTaGAAACCCGTGGGTTTAGTA +
Preference number: 2 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQLGLRG*KPVGLV
Trigger: TACTAAACCCACGGGTTTTCAGCCTCTTAAGCCCAG...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATGGAAGGAACCATTTCTaGCACCCAGCAGACCCACAG +
Preference number: 2 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHGRNHF*HPADPQ
Trigger: CTGTGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCC...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp TCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTTGGGAGGAAGGAACCATTTCTaGCACCCAGCAGACCCACAG +
Preference number: 2 (lower is better)
Translates to: SMPPSLPRCSQEELKILGGRNHF*HPADPQ
Trigger: CTGTGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCC...TCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATTCTGAAGGGAACAACTaGGGAAGGAGGGAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHSEGNN*GRREWV
Trigger: CACCCACTCCCTCCTTCCCCAGTTGTTCCCTTCAGA...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACAAAATGACGTGGAGCCTCCTGGAGGGAAGCTaGGCAGTGTCTGACCCTGTT +
Preference number: 2 (lower is better)
Translates to: GWLKLPPAYNQPDKMTWSLLEGS*AVSDPV
Trigger: AACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAG...GCTCCACGTCATTTTGTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATGAGACAAGAACCTCCTaGAGGGAAGCTGGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHETRTS*REAGQC
Trigger: ACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTC...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTCTTCACAATCATCCCTaGGGGCTGGTTAAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: RSSNRSFSRQRGIDATIPLHNHP*GLVKAA
Trigger: GGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAAG...AGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGTTCCAGTGGGCAGCTaGGGCCTACACACCGAAAAC +
Preference number: 2 (lower is better)
Translates to: ELKILGEQALAGSSSGQLVPVGS*GLHTEN
Trigger: GTTTTCGGTGTGTAGGCCCCAGCTGCCCACTGGAAC...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGAGCCGGCAGTTCCAGTaGGCAGCTGGGGCCTACACA +
Preference number: 2 (lower is better)
Translates to: LRYQRLVNPALSTNWRSESRQFQ*AAGAYT
Trigger: TGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCT...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp AGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAACCAGCCTGACAAAATaGCGTGGAGCAAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: SRQRGIDATIPTQVQPGGTSLTK*RGAKEK
Trigger: TTTTTCTTTTGCTCCACGTCATTTTGTCAGGCTGGT...TCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp TCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTTGGGAGAAAGCAGCGCATCTTaGCGCCTGGCTAGAAATCAC +
Preference number: 2 (lower is better)
Translates to: SMPPSLPRCSQEELKILGESSAS*RLARNH
Trigger: GTGATTTCTAGCCAGGCGTCAAGATGCGCTGCTTTC...TCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp AACCTCCTGGAGGGAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGCTGGGCTTAAGAGGCTaGAAACCCGTGGGTTTAGTA +
Preference number: 2 (lower is better)
Translates to: NLLEGSWAVSDPVLGWHWLGLRG*KPVGLV
Trigger: TACTAAACCCACGGGTTTTCAGCCTCTTAAGCCCAG...CCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGCACCGAAAACAAGGCTaGGTAGTCAGAGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: ELKILGEQALAGSSSGQLHRKQG*VVRGSR
Trigger: CCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTG...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp CTAGTTCCCGGAGATTCCGCATCTCCAGGTCTTTCAGCAACACGGAGTAGGGGATTCAGCTTGTTCTGCTaGGCTGTGCTCAGTTCTGGC +
Preference number: 2 (lower is better)
Translates to: LVPGDSASPGLSATRSRGFSLFC*AVLSSG
Trigger: GCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAA...TCCCCTACTCCGTGTTGCTGAAAGACCTGGAGATGCGGAATCTCCGGGAACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449784.5
3UTR-3UTR GCA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGCTGGCTAGAAATCACTaGACCATCGTGAGGACTGTG +
Preference number: 2 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEELARNH*TIVRTV
Trigger: CACAGTCCTCACGATGGTGCAGTGATTTCTAGCCAG...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp AACCTCCTGGAGGGAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGGGATGTCACGGCCAATaGAGAAATCCACTTCCAGCA +
Preference number: 2 (lower is better)
Translates to: NLLEGSWAVSDPVLGWHWGCHGQ*RNPLPA
Trigger: TGCTGGAAGTGGATTTCTGCATTGGCCGTGACATCC...CCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp CAAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGACAGTACCAACAGGGTaGGGAGGCGCTGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: QKKNWEGDKPLHRDKNLLTVPTG*GGAGEG
Trigger: CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGT...CAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AAGAGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCTCTGAAGGGAACAACTaGGGAAGGAGGGAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: KRLKTRGFSKHSPASRPSSEGNN*GRREWV
Trigger: CACCCACTCCCTCCTTCCCCAGTTGTTCCCTTCAGA...GGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp TTCACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTTCTGAAGGGAACAACTaGGGAAGGAGGGAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: FTIIPGGWLKLPPAYNQPSEGNN*GRREWV
Trigger: CACCCACTCCCTCCTTCCCCAGTTGTTCCCTTCAGA...AGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp ACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCCTTCACAATCATCCCTaGGGGCTGGTTAAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: TAPSVCAQIPEVSQPSALLHNHP*GLVKAA
Trigger: GGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAAG...GAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp ACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCGCGCATCTTGACGCCTaGCTAGAAATCACTGCACCA +
Preference number: 2 (lower is better)
Translates to: TAPSVCAQIPEVSQPSALAHLDA*LEITAP
Trigger: TGGTGCAGTGATTTCTAGCCAGGCGTCAAGATGCGC...GAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGGCGCTCTCAACTAATTaGAGATCGGAGCTGGGCTTA +
Preference number: 2 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEEALSTN*RSELGL
Trigger: TAAGCCCAGCTCCGATCTCCAATTAGTTGAGAGCGC...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp CACGATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCTGGCAGAGCAGCTGGTTTCGCTaGTCCAGCTTGCCCTGGATG +
Preference number: 2 (lower is better)
Translates to: HDGKMLQLVLLSCAQFWQSSWFR*SSLPWM
Trigger: CATCCAGGGCAAGCTGGACCAGCGAAACCAGCTGCT...CTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449784.5
3UTR-3UTR TCA 90 bp ACTTTGGAAATTAAAGTGAACTCTCCACTTGGGCATAATGTTATGTGGGCACATGTGGGGAGGCGCTGGTaGGGGGACGGGCAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: TLEIKVNSPLGHNVMWAHVGRRW*GDGQVW
Trigger: CCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCAC...ATGTGCCCACATAACATTATGCCCAAGTGGAGAGTTCACTTTAATTTCCAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp ACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCCTGGGCTTAAGAGGCTaGAAACCCGTGGGTTTAGTA +
Preference number: 2 (lower is better)
Translates to: TAPSVCAQIPEVSQPSALLGLRG*KPVGLV
Trigger: TACTAAACCCACGGGTTTTCAGCCTCTTAAGCCCAG...GAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp ATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCAACCCACCGAAAACAAGGCTaGGTAGTCAGAGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: IFLNHPNPSPSRSTRYATHRKQG*VVRGSR
Trigger: CCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTG...GGTTGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp AGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCACGCTGGCTAGAAATCACTaGACCATCGTGAGGACTGTG +
Preference number: 2 (lower is better)
Translates to: RLKTRGFSKHSPASRPSTLARNH*TIVRTV
Trigger: CACAGTCCTCACGATGGTGCAGTGATTTCTAGCCAG...CGTGGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp ACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCGAACTTGCTGCTCGATaGCCAGTAGAACTGCTTCAC +
Preference number: 2 (lower is better)
Translates to: TAPSVCAQIPEVSQPSALELAAR*PVELLH
Trigger: GTGAAGCAGTTCTACTGGGCATCGAGCAGCAAGTTC...GAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR GCA 90 bp AGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCACGTTGGCTCTCAGAACTTaGTGCTCGATGCCCAGTAGA +
Preference number: 2 (lower is better)
Translates to: RLKTRGFSKHSPASRPSTLALRT*CSMPSR
Trigger: TCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAA...CGTGGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGGGGGACGGGCAGGTCTaGAACTCACTGCAGGTAGAG +
Preference number: 2 (lower is better)
Translates to: KRKTGRETSPYTETRTSWGDGQV*NSLQVE
Trigger: CTCTACCTGCAGTGAGTTCCAGACCTGCCCGTCCCC...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp CAAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGGGGACGGGCAGGTCTaGAACTCACTGCAGGTAGAG +
Preference number: 2 (lower is better)
Translates to: QKKNWEGDKPLHRDKNLLGDGQV*NSLQVE
Trigger: CTCTACCTGCAGTGAGTTCCAGACCTGCCCGTCCCC...CAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp CCTCAAGATCCACCAGGTATGCAACCCCAAACCCCAGTCACATACATTAAATCTACAGTACCAACAGGGTaGGGAGGCGCTGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: PQDPPGMQPQTPVTYIKSTVPTG*GGAGEG
Trigger: CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGT...AGATTTAATGTATGTGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp TTCACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTTGTCTGACCCTGTTTTaGGATGGCATTGGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: FTIIPGGWLKLPPAYNQPCLTLF*DGIGGA
Trigger: GGCTCCACCAATGCCATCCCAAAACAGGGTCAGACA...AGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp TTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGGCGCTCTCAACTAATTaGAGATCGGAGCTGGGCTTA +
Preference number: 2 (lower is better)
Translates to: LKILGEQALAGSSSGQLGALSTN*RSELGL
Trigger: TAAGCCCAGCTCCGATCTCCAATTAGTTGAGAGCGC...CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGGTTCCAGTGGGCAGCTaGGGCCTACACACCGAAAAC +
Preference number: 2 (lower is better)
Translates to: LRYQRLVNPALSTNWRSEVPVGS*GLHTEN
Trigger: GTTTTCGGTGTGTAGGCCCCAGCTGCCCACTGGAAC...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp GGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCACCAGCCTGACAAAATaGCGTGGAGCAAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: GASMPPSLPRCSQEELKITSLTK*RGAKEK
Trigger: TTTTTCTTTTGCTCCACGTCATTTTGTCAGGCTGGT...GATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGATCACTGCACCATCGTaGGGACTGTGGTACCAGGGG +
Preference number: 2 (lower is better)
Translates to: KRKTGRETSPYTETRTSWITAPS*GLWYQG
Trigger: CCCCTGGTACCACAGTCCTCACGATGGTGCAGTGAT...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp ATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCAACCGAAAGCAGCGCATCTTaGCGCCTGGCTAGAAATCAC +
Preference number: 2 (lower is better)
Translates to: IFLNHPNPSPSRSTRYATESSAS*RLARNH
Trigger: GTGATTTCTAGCCAGGCGTCAAGATGCGCTGCTTTC...GGTTGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp CACGATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCTGGCAGTTCAGCTTGTTCTGCTaGGCTGTGCTCAGTTCTGGC +
Preference number: 2 (lower is better)
Translates to: HDGKMLQLVLLSCAQFWQFSLFC*AVLSSG
Trigger: GCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAA...CTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATCGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436564.5
ENST00000449784.5
3UTR-3UTR GCA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGCTGGCTAGAAATCACTaGACCATCGTGAGGACTGTG +
Preference number: 2 (lower is better)
Translates to: ELKILGEQALAGSSSGQLLARNH*TIVRTV
Trigger: CACAGTCCTCACGATGGTGCAGTGATTTCTAGCCAG...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGCTCTCAGAACTTGCTaGTCGATGCCCAGTAGAACT +
Preference number: 2 (lower is better)
Translates to: ELKILGEQALAGSSSGQLALRTC*SMPSRT
Trigger: AGTTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGC...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp TTAAGTCTTTTTCTCTTGCCAGGAGAATGCCATCATCAGAGGGCTCTGGGTCATAGAGAGGGGAGGAAATaGGCCCTTGGTGTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: LSLFLLPGECHHQRALGHREGRK*ALGVPS
Trigger: GGAGGGGACACCAAGGGCCCATTTCCTCCCCTCTCT...ATGACCCAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGTCTGAAGGGAACAACTaGGGAAGGAGGGAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: LRYQRLVNPALSTNWRSESEGNN*GRREWV
Trigger: CACCCACTCCCTCCTTCCCCAGTTGTTCCCTTCAGA...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGCTCCTGGAGGGAAGCTaGGCAGTGTCTGACCCTGTT +
Preference number: 2 (lower is better)
Translates to: KRKTGRETSPYTETRTSWLLEGS*AVSDPV
Trigger: AACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAG...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GGTCTTTCAGCAACACGGAGTAGGGGATACACTTCATTCTTGATGCCAAGCTCACTCCTGGAGGGAAGCTaGGCAGTGTCTGACCCTGTT +
Preference number: 2 (lower is better)
Translates to: GLSATRSRGYTSFLMPSSLLEGS*AVSDPV
Trigger: AACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAG...TGAGCTTGGCATCAAGAATGAAGTGTATCCCCTACTCCGTGTTGCTGAAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413197.5
3UTR-3UTR CCA 90 bp AAACAGCATCACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCGAGACAAGAACCTCCTaGAGGGAAGCTGGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: KQHHIFLNHPNPSPSRSTETRTS*REAGQC
Trigger: ACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTC...GGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTGATGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp TTCACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGCGCTCTCAACTAATTaGAGATCGGAGCTGGGCTTA +
Preference number: 2 (lower is better)
Translates to: FTIIPGGWLKLPPAYNQPALSTN*RSELGL
Trigger: TAAGCCCAGCTCCGATCTCCAATTAGTTGAGAGCGC...AGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGAGGCAGCAGGAAGAGTaGCCAGGAGAGAACGCCAAG +
Preference number: 2 (lower is better)
Translates to: KRKTGRETSPYTETRTSWRQQEE*PGENAK
Trigger: CTTGGCGTTCTCTCCTGGCCACTCTTCCTGCTGCCT...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp ACTTTGGAAATTAAAGTGAACTCTCCACTTGGGCATAATGTTATGTGGGCACATTGTCCCCTCCCCACCTaGCCCAGGCCTGGTGAGTGC +
Preference number: 2 (lower is better)
Translates to: TLEIKVNSPLGHNVMWAHCPLPT*PRPGEC
Trigger: GCACTCACCAGGCCTGGGTCAGGTGGGGAGGGGACA...ATGTGCCCACATAACATTATGCCCAAGTGGAGAGTTCACTTTAATTTCCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp AACCTCCTGGAGGGAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGACCAGCCTGACAAAATaGCGTGGAGCAAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: NLLEGSWAVSDPVLGWHWTSLTK*RGAKEK
Trigger: TTTTTCTTTTGCTCCACGTCATTTTGTCAGGCTGGT...CCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp AGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCACGGATACACTTCATTCTTaGTGCCAAGCTCACGATGGT +
Preference number: 2 (lower is better)
Translates to: RLKTRGFSKHSPASRPSTDTLHS*CQAHDG
Trigger: ACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATC...CGTGGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413197.5
3UTR-3UTR TCA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGGCTTCTACCTGCTGCTaGGTTCGGTTGTGGTTCTCT +
Preference number: 2 (lower is better)
Translates to: LRYQRLVNPALSTNWRSEASTCC*VRLWFS
Trigger: AGAGAACCACAACCGAACTCAGCAGCAGGTAGAAGC...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR TCA 90 bp TTCATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCTGCTGCTCCATCTCCTaGGCCGAGGAGGATGCGGTG +
Preference number: 2 (lower is better)
Translates to: FMQGLDNIIDILLSDVTACCSIS*AEEDAV
Trigger: CACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCA...GGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR GCA 90 bp CCTCAAGATCCACCAGGTATGCAACCCCAAACCCCAGTCACATACATTAAATCTGGCCTGAACTGGAGCTaGCAACAAGGGATGAGGCAG +
Preference number: 2 (lower is better)
Translates to: PQDPPGMQPQTPVTYIKSGLNWS*QQGMRQ
Trigger: CTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCC...AGATTTAATGTATGTGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGCTCTTGCCAGGAGAATaGCATCATCAGAGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: LRYQRLVNPALSTNWRSELLPGE*HHQRAL
Trigger: CAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAG...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp TTCACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGATGTTGGTAACCTCTaGTTCTACCTGCTGCTGAGT +
Preference number: 2 (lower is better)
Translates to: FTIIPGGWLKLPPAYNQPDVGNL*FYLLLS
Trigger: ACTCAGCAGCAGGTAGAAGCAGAGGTTACCAACATC...AGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp TTAAGTCTTTTTCTCTTGCCAGGAGAATGCCATCATCAGAGGGCTCTGGGTCATATCATCCCTGGGGGCTaGTTAAAGCTGCCTCCGGCT +
Preference number: 2 (lower is better)
Translates to: LSLFLLPGECHHQRALGHIIPGG*LKLPPA
Trigger: AGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGAT...ATGACCCAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATTCTCTTTGTACTGGTTaGCTCTCAGAACTTGCTGCT +
Preference number: 2 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHSLCTG*LSELAA
Trigger: AGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGA...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR TCA 90 bp TCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTTGGGAACCAGCCTGACAAAATaGCGTGGAGCAAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: SMPPSLPRCSQEELKILGTSLTK*RGAKEK
Trigger: TTTTTCTTTTGCTCCACGTCATTTTGTCAGGCTGGT...TCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp CTCCACTTGGGCATAATGTTATGTGGGCACATGGATTGGCTTAAAAGGGAAACAATCACTGCACCATCGTaGGGACTGTGGTACCAGGGG +
Preference number: 2 (lower is better)
Translates to: LHLGIMLCGHMDWLKRETITAPS*GLWYQG
Trigger: CCCCTGGTACCACAGTCCTCACGATGGTGCAGTGAT...TGTTTCCCTTTTAAGCCAATCCATGTGCCCACATAACATTATGCCCAAGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp TTAAGTCTTTTTCTCTTGCCAGGAGAATGCCATCATCAGAGGGCTCTGGGTCATCACCGAAAACAAGGCTaGGTAGTCAGAGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: LSLFLLPGECHHQRALGHHRKQG*VVRGSR
Trigger: CCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTG...ATGACCCAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp CAGGTTCAACAACTGCAAATAAGCAGCATTAGCTCCTTCCGCAAGTCTTCACTGCCAGCTTGCCCTGGATaGTGTCAGTGTAGACAGCCT +
Preference number: 2 (lower is better)
Translates to: QVQQLQISSISSFRKSSLPACPG*CQCRQP
Trigger: AGGCTGTCTACACTGACATCATCCAGGGCAAGCTGG...CAGTGAAGACTTGCGGAAGGAGCTAATGCTGCTTATTTGCAGTTGTTGAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449784.5
3UTR-3UTR TCA 90 bp GATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCTGGCAGGCTACCGCGCCCAGCCTATaGGTGACTTTTAAAAAGTCT +
Preference number: 2 (lower is better)
Translates to: DGKMLQLVLLSCAQFWQATAPSL*VTFKKS
Trigger: AGACTTTTTAAAAGTCACTCATAGGCTGGGCGCGGT...AGCCTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436564.5
3UTR-3UTR GCA 90 bp AACCTCCTGGAGGGAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGCCATCACACCATTCATaGAGGGTCTTGACAATATTA +
Preference number: 2 (lower is better)
Translates to: NLLEGSWAVSDPVLGWHWPSHHS*RVLTIL
Trigger: TAATATTGTCAAGACCCTGCATGAATGGTGTGATGG...CCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGTGTCTGACCCTGTTTTaGGATGGCATTGGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: KRKTGRETSPYTETRTSWCLTLF*DGIGGA
Trigger: GGCTCCACCAATGCCATCCCAAAACAGGGTCAGACA...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp CTCCACTTGGGCATAATGTTATGTGGGCACATGGATTGGCTTAAAAGGGAAACACTCCACGGCCTGAACTaGAGCTGCCAACAAGGGATG +
Preference number: 2 (lower is better)
Translates to: LHLGIMLCGHMDWLKRETLHGLN*SCQQGM
Trigger: CATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAG...TGTTTCCCTTTTAAGCCAATCCATGTGCCCACATAACATTATGCCCAAGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp GCTTTTTCCTCAATGAACTTTAATCAGTCCAGGACCTACAAACACACACACACAAGCCGGCAGTTCCAGTaGGCAGCTGGGGCCTACACA +
Preference number: 2 (lower is better)
Translates to: AFSSMNFNQSRTYKHTHTSRQFQ*AAGAYT
Trigger: TGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCT...TGTGTGTGTGTGTTTGTAGGTCCTGGACTGATTAAAGTTCATTGAGGAAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR CAA 90 bp GCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTaGTTGTTGTTGTTTAAATCACAAACGTGGGCCGGGCGCGGTGGC +
Preference number: 2 (lower is better)
Translates to: AWNFSAVNYVNWLLL*LLLFKSQTWAGRGG
Trigger: GCCACCGCGCCCGGCCCACGTTTGTGATTTAAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
3UTR-3UTR TCA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGCTGGGCTTAAGAGGCTaGAAACCCGTGGGTTTAGTA +
Preference number: 2 (lower is better)
Translates to: KRKTGRETSPYTETRTSWLGLRG*KPVGLV
Trigger: TACTAAACCCACGGGTTTTCAGCCTCTTAAGCCCAG...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp GATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCTGGCAGGCTGATACACTTCATTCTTaGTGCCAAGCTCACGATGGT +
Preference number: 2 (lower is better)
Translates to: DGKMLQLVLLSCAQFWQADTLHS*CQAHDG
Trigger: ACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATC...AGCCTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436564.5
ENST00000449784.5
3UTR-3UTR GCA 90 bp CCTCAAGATCCACCAGGTATGCAACCCCAAACCCCAGTCACATACATTAAATCTCTCTTGCCAGGAGAATaGCATCATCAGAGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: PQDPPGMQPQTPVTYIKSLLPGE*HHQRAL
Trigger: CAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAG...AGATTTAATGTATGTGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp CAAGCTCACGATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCTACAGGTGGGTATTCTaGACTTCACAGCACTCCAAG +
Preference number: 2 (lower is better)
Translates to: QAHDGKMLQLVLLSCAQFYRWVF*TSQHSK
Trigger: CTTGGAGTGCTGTGAAGTGCAGAATACCCACCTGTA...GAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATCGTGAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436564.5
3UTR-3UTR CCA 90 bp ACTTTGGAAATTAAAGTGAACTCTCCACTTGGGCATAATGTTATGTGGGCACATACAGTACCAACAGGGTaGGGAGGCGCTGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: TLEIKVNSPLGHNVMWAHTVPTG*GGAGEG
Trigger: CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGT...ATGTGCCCACATAACATTATGCCCAAGTGGAGAGTTCACTTTAATTTCCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp TTCATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCCTCCTGGAGGGAAGCTaGGCAGTGTCTGACCCTGTT +
Preference number: 2 (lower is better)
Translates to: FMQGLDNIIDILLSDVTALLEGS*AVSDPV
Trigger: AACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAG...GGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp CAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATGCAATCATCCCTGGGGGCTaGTTAAAGCTGCCTCCGGCT +
Preference number: 2 (lower is better)
Translates to: QGLDNIIDILLSDVTANAIIPGG*LKLPPA
Trigger: AGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGAT...TGCATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp CAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATGCATCTGAAGGGAACAACTaGGGAAGGAGGGAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: QGLDNIIDILLSDVTANASEGNN*GRREWV
Trigger: CACCCACTCCCTCCTTCCCCAGTTGTTCCCTTCAGA...TGCATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp TCATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAGAGACAAGAACCTCCTaGAGGGAAGCTGGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: SCRVLTILLISFFRMSRPETRTS*REAGQC
Trigger: ACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTC...TGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR CAA 90 bp TCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTaGTTGTTGTTGTTGTTTAAATCACAAACGTGGGCCGGGCGCGGT +
Preference number: 2 (lower is better)
Translates to: SAWNFSAVNYVNWLL*LLLLFKSQTWAGRG
Trigger: ACCGCGCCCGGCCCACGTTTGTGATTTAAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
3UTR-3UTR TCA 90 bp GCTTTTTCCTCAATGAACTTTAATCAGTCCAGGACCTACAAACACACACACACAAAGCTGGGCAGTGTCTaGCCCTGTTTTGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: AFSSMNFNQSRTYKHTHTKLGSV*PCFGMA
Trigger: TGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTT...TGTGTGTGTGTGTTTGTAGGTCCTGGACTGATTAAAGTTCATTGAGGAAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp ATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCAACCGTGCTTTTTCCTCAATaGACTTTAATCAGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: IFLNHPNPSPSRSTRYATVLFPQ*TLISPG
Trigger: TCCTGGACTGATTAAAGTTCATTGAGGAAAAAGCAC...GGTTGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR GCA 90 bp TTAAGTCTTTTTCTCTTGCCAGGAGAATGCCATCATCAGAGGGCTCTGGGTCATGATGTTGGTAACCTCTaGTTCTACCTGCTGCTGAGT +
Preference number: 2 (lower is better)
Translates to: LSLFLLPGECHHQRALGHDVGNL*FYLLLS
Trigger: ACTCAGCAGCAGGTAGAAGCAGAGGTTACCAACATC...ATGACCCAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CCA 90 bp ACTTTGGAAATTAAAGTGAACTCTCCACTTGGGCATAATGTTATGTGGGCACATCTCCACGGCCTGAACTaGAGCTGCCAACAAGGGATG +
Preference number: 2 (lower is better)
Translates to: TLEIKVNSPLGHNVMWAHLHGLN*SCQQGM
Trigger: CATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAG...ATGTGCCCACATAACATTATGCCCAAGTGGAGAGTTCACTTTAATTTCCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CCA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGTGGTTCTCTTTGTACTaGTTGGCTCTCAGAACTTGC +
Preference number: 2 (lower is better)
Translates to: KRKTGRETSPYTETRTSWWFSLY*LALRTC
Trigger: GCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCA...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR CAA 90 bp TGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTaGTTGTTGTTGTTGTTGTTTAAATCACAAACGTGGGCCGGGCGC +
Preference number: 2 (lower is better)
Translates to: CSAWNFSAVNYVNWL*LLLLLFKSQTWAGR
Trigger: GCGCCCGGCCCACGTTTGTGATTTAAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
3UTR CAA 90 bp CCCTTTTCCACAGAGCAGCTGACAGGGGGCTGCATGAAACATACTTaGGAAATTAAAGTGAACTCTCCACTTGGGCATAATGTTATGTGG +
Preference number: 2 (lower is better)
Translates to: PFSTEQLTGGCMKHT*EIKVNSPLGHNVMW
Trigger: CCACATAACATTATGCCCAAGTGGAGAGTTCACTTTAATTTCCAAAGTATGTTTCATGCAGCCCCCTGTCAGCTGCTCTGTGGAAAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR CAA 90 bp CACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTaGTTGTTGTTGTTGTTGTTGTTTAAATCACAAACGTGGGCCGGG +
Preference number: 2 (lower is better)
Translates to: HCSAWNFSAVNYVNW*LLLLLLFKSQTWAG
Trigger: CCCGGCCCACGTTTGTGATTTAAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
3UTR CAA 90 bp GCTTCACAGCCATCACACCATTCATGCAGGGTCTTGACAATATTATaGATATCCTTCTTTCGGATGTCACGGCCAATGCAGAAATCCACT +
Preference number: 2 (lower is better)
Translates to: ASQPSHHSCRVLTIL*ISFFRMSRPMQKST
Trigger: AGTGGATTTCTGCATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCATGAATGGTGTGATGGCTGTGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR TCA 90 bp GGGATGCAGGGAGTGCAACATTTATTTCATAACAGAACCCCTTTTCCACAGAGCACCAGCCTGACAAAATaGCGTGGAGCAAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: GMQGVQHLFHNRTPFPQSTSLTK*RGAKEK
Trigger: TTTTTCTTTTGCTCCACGTCATTTTGTCAGGCTGGT...GCTCTGTGGAAAAGGGGTTCTGTTATGAAATAAATGTTGCACTCCCTGCATCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR TCA 90 bp AAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAGATACACTTCATTCTTaGTGCCAAGCTCACGATGGT +
Preference number: 2 (lower is better)
Translates to: KNERATVLPGTSLLSITLDTLHS*CQAHDG
Trigger: ACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATC...TAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449784.5
3UTR-3UTR CCA 90 bp AAACAGGTTCAACAACTGCAAATAAGCAGCATTAGCTCCTTCCGCAAGTCTTCAGTCAATTACGTTAACTaGTTGTTGTTGTTGTTGTTG +
Preference number: 2 (lower is better)
Translates to: KQVQQLQISSISSFRKSSVNYVN*LLLLLL
Trigger: CAACAACAACAACAACAACCAGTTAACGTAATTGAC...TGAAGACTTGCGGAAGGAGCTAATGCTGCTTATTTGCAGTTGTTGAACCTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
3UTR CCA 72 bp ACACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTaGAGCTGCCAACAAGGGATGAGGCAGGAGAGGGAA +
Preference number: 3 (lower is better)
Translates to: TQPSITSLHGLN*SCQQGMRQERE
Trigger: TTCCCTCTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CAA 90 bp ACACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGTGTTTTGGGATGGCATaGGTGGAGCCCCTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: TQPSITSLHGLNWSCQQGCFGMA*VEPLSL
Trigger: CAGACTCAGGGGCTCCACCAATGCCATCCCAAAACA...CCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR CCA 72 bp GGGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTaGGGAGGCGCTGGTGAGGGGACGGGCAGGTCTGGA +
Preference number: 3 (lower is better)
Translates to: GSNSFSGTVPTG*GGAGEGTGRSG
Trigger: TCCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR CCA 72 bp TCCTGGAGGGAAGCTGGGCAGTGTCTGACCCTGTTTTaGGATGGCATTGGTGGAGCCCCTGAGTCTGAAGGG +
Preference number: 3 (lower is better)
Translates to: SWREAGQCLTLF*DGIGGAPESEG
Trigger: CCCTTCAGACTCAGGGGCTCCACCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CAA 90 bp AGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGTGTTTTGGGATGGCATaGGTGGAGCCCCTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: RSFSRQRGIDATIPTQVQCFGMA*VEPLSL
Trigger: CAGACTCAGGGGCTCCACCAATGCCATCCCAAAACA...CTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CAA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACTTTCGCTGGTCCAGCTaGCCCTGGATGATGTCAGTG +
Preference number: 3 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHFRWSS*PWMMSV
Trigger: CACTGACATCATCCAGGGCAAGCTGGACCAGCGAAA...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CAA 90 bp GGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGTTCTCTTTGTACTGGTaGGCTCTCAGAACTTGCTGC +
Preference number: 3 (lower is better)
Translates to: GRASISRQFQWAAGAYTPFSLYW*ALRTCC
Trigger: GCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAA...CGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR TCA 72 bp CATCTTGACGCCTGGCTAGAAATCACTGCACCATCGTaGGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCC +
Preference number: 3 (lower is better)
Translates to: HLDAWLEITAPS*GLWYQGLERSA
Trigger: GGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACGATGGTGCAGTGATTTCTAGCCAGGCGTCAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR CCA 72 bp GATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTaGGCAGCTGGGGCCTACACACCGAAAACAAGGCTG +
Preference number: 3 (lower is better)
Translates to: DLGRASISRQFQ*AAGAYTPKTRL
Trigger: CAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CAA 90 bp AACCTCCTGGAGGGAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTTTCGCTGGTCCAGCTaGCCCTGGATGATGTCAGTG +
Preference number: 3 (lower is better)
Translates to: NLLEGSWAVSDPVLGWHWFRWSS*PWMMSV
Trigger: CACTGACATCATCCAGGGCAAGCTGGACCAGCGAAA...CCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CAA 90 bp GCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACCCACGGTTGTGGTTCTCTTaGTACTGGTTGGCTCTCAGA +
Preference number: 3 (lower is better)
Translates to: ARRERQAGRNHFCHPADPRLWFS*YWLALR
Trigger: TCTGAGAGCCAACCAGTACAAAGAGAACCACAACCG...TGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CAA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGACTTTGGACATCTTCTaGGTGGGCTGCCTCTGCTCA +
Preference number: 3 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQTLDIF*VGCLCS
Trigger: TGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAGT...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CAA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATTGTTTTGGGATGGCATaGGTGGAGCCCCTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHCFGMA*VEPLSL
Trigger: CAGACTCAGGGGCTCCACCAATGCCATCCCAAAACA...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CAA 90 bp GCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACCCATTCTCTTTGTACTGGTaGGCTCTCAGAACTTGCTGC +
Preference number: 3 (lower is better)
Translates to: ARRERQAGRNHFCHPADPFSLYW*ALRTCC
Trigger: GCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAA...TGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR GCA 72 bp AGCCAGCTGCTGCTCCATCTCCTGAGCCGAGGAGGATaGGGTGGCTTTGAGTGTCTTCTTGATGTTGGTAAC +
Preference number: 3 (lower is better)
Translates to: SQLLLHLLSRGG*GGFECLLDVGN
Trigger: GTTACCAACATCAAGAAGACACTCAAAGCCACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCAGCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CAA 90 bp GGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACAAAATGACGTGGAGCGTGTCTGACCCTGTTTaGGGATGGCATTGGTGGAGC +
Preference number: 3 (lower is better)
Translates to: GWLKLPPAYNQPDKMTWSVSDPV*GWHWWS
Trigger: GCTCCACCAATGCCATCCCAAAACAGGGTCAGACAC...GCTCCACGTCATTTTGTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CAA 90 bp AGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGAGTGTCTTCTTGATGTaGGTAACCTCTGCTTCTACC +
Preference number: 3 (lower is better)
Translates to: RSFSRQRGIDATIPTQVQSVFLM*VTSAST
Trigger: GGTAGAAGCAGAGGTTACCAACATCAAGAAGACACT...CTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CAA 90 bp CCACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCGAGGATGCGGTGGCTTaGAGTGTCTTCTTGATGTTG +
Preference number: 3 (lower is better)
Translates to: PQHPLSVLRYQRLVNPALEDAVA*SVFLML
Trigger: CAACATCAAGAAGACACTCAAAGCCACCGCATCCTC...GAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CAA 90 bp CACGATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCTGGCAGGGCAGGCTCTCCTTGTaGGCTCAAGTGATCTGCCTG +
Preference number: 3 (lower is better)
Translates to: HDGKMLQLVLLSCAQFWQGRLSL*AQVICL
Trigger: CAGGCAGATCACTTGAGCCAACAAGGAGAGCCTGCC...CTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436564.5
3UTR-3UTR CAA 90 bp CACGATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCTGGCAGTCTGGCAGGCTCTCCTaGTTGGCTCAAGTGATCTGC +
Preference number: 3 (lower is better)
Translates to: HDGKMLQLVLLSCAQFWQSGRLS*LAQVIC
Trigger: GCAGATCACTTGAGCCAACAAGGAGAGCCTGCCAGA...CTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATCGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436564.5
3UTR CCA 72 bp TTCTCTTGCCAGGAGAATGCCATCATCAGAGGGCTCTaGGTCATCAGCCAAGGAGGGGTGAAAAGACAGAAG +
Preference number: 3 (lower is better)
Translates to: FSCQENAIIRGL*VISQGGVKRQK
Trigger: CTTCTGTCTTTTCACCCCTCCTTGGCTGATGACCCAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CAA 90 bp AAACAGCATCACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCGTGTCTGACCCTGTTTaGGGATGGCATTGGTGGAGC +
Preference number: 3 (lower is better)
Translates to: KQHHIFLNHPNPSPSRSTVSDPV*GWHWWS
Trigger: GCTCCACCAATGCCATCCCAAAACAGGGTCAGACAC...GGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTGATGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CAA 90 bp CCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGAGGGAAAGTTAAGTCTTTTTCTCTaGCCAGGAGAATGCCATCAT +
Preference number: 3 (lower is better)
Translates to: PPRPELELPTRDEAGEGKLSLFL*PGECHH
Trigger: ATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA...CTTTCCCTCTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CAA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGGATACACTTCATTCTaGATGCCAAGCTCACGATGG +
Preference number: 3 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGGYTSF*MPSSRW
Trigger: CCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000413197.5
3UTR-3UTR CAA 90 bp CAAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGTGTTTTGGGATGGCATaGGTGGAGCCCCTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: QKKNWEGDKPLHRDKNLLCFGMA*VEPLSL
Trigger: CAGACTCAGGGGCTCCACCAATGCCATCCCAAAACA...CAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CAA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGGTGTCTGACCCTGTTTaGGGATGGCATTGGTGGAGC +
Preference number: 3 (lower is better)
Translates to: KRKTGRETSPYTETRTSWVSDPV*GWHWWS
Trigger: GCTCCACCAATGCCATCCCAAAACAGGGTCAGACAC...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CAA 90 bp CACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCACGGTTGTGGTTCTCTTaGTACTGGTTGGCTCTCAGA +
Preference number: 3 (lower is better)
Translates to: HIFLNHPNPSPSRSTRYARLWFS*YWLALR
Trigger: TCTGAGAGCCAACCAGTACAAAGAGAACCACAACCG...TGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413197.5
3UTR-3UTR CAA 90 bp AGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCACGGCTTTGAGTGTCTTCTaGATGTTGGTAACCTCTGCT +
Preference number: 3 (lower is better)
Translates to: RLKTRGFSKHSPASRPSTALSVF*MLVTSA
Trigger: AGCAGAGGTTACCAACATCAAGAAGACACTCAAAGC...CGTGGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR TCA 72 bp AAGCTCACGATGGTAAGATGCTTCAGCTTGTTCTGCTaGGCTGTGCTCAGTTCTGGCAGGCTCTCCTTGTTG +
Preference number: 3 (lower is better)
Translates to: KLTMVRCFSLFC*AVLSSGRLSLL
Trigger: CAACAAGGAGAGCCTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATCGTGAGCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436564.5
ENST00000449784.5
3UTR CCA 72 bp GCTGCTGAGTTCGGTTGTGGTTCTCTTTGTACTGGTTaGCTCTCAGAACTTGCTGCTCGATGCCCAGTAGAA +
Preference number: 3 (lower is better)
Translates to: AAEFGCGSLCTG*LSELAARCPVE
Trigger: TTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCACAACCGAACTCAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CAA 90 bp TTAAGTCTTTTTCTCTTGCCAGGAGAATGCCATCATCAGAGGGCTCTGGGTCATGTGTCTGACCCTGTTTaGGGATGGCATTGGTGGAGC +
Preference number: 3 (lower is better)
Translates to: LSLFLLPGECHHQRALGHVSDPV*GWHWWS
Trigger: GCTCCACCAATGCCATCCCAAAACAGGGTCAGACAC...ATGACCCAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CAA 90 bp CCTCAAGATCCACCAGGTATGCAACCCCAAACCCCAGTCACATACATTAAATCTGTGTCTGACCCTGTTTaGGGATGGCATTGGTGGAGC +
Preference number: 3 (lower is better)
Translates to: PQDPPGMQPQTPVTYIKSVSDPV*GWHWWS
Trigger: GCTCCACCAATGCCATCCCAAAACAGGGTCAGACAC...AGATTTAATGTATGTGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CAA 90 bp CACGATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCTGGCAGGGATACACTTCATTCTaGATGCCAAGCTCACGATGG +
Preference number: 3 (lower is better)
Translates to: HDGKMLQLVLLSCAQFWQGYTSF*MPSSRW
Trigger: CCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCC...CTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436564.5
ENST00000449784.5
3UTR GCA 72 bp TGGTTCTCTTTGTACTGGTTGGCTCTCAGAACTTGCTaGTCGATGCCCAGTAGAACTGCTTCACAGCCATCA +
Preference number: 3 (lower is better)
Translates to: WFSLYWLALRTC*SMPSRTASQPS
Trigger: TGATGGCTGTGAAGCAGTTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR GCA 72 bp TTGTGGTTCTCTTTGTACTGGTTGGCTCTCAGAACTTaGTGCTCGATGCCCAGTAGAACTGCTTCACAGCCA +
Preference number: 3 (lower is better)
Translates to: LWFSLYWLALRT*CSMPSRTASQP
Trigger: TGGCTGTGAAGCAGTTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CAA 90 bp ATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCAACCGCTTTGAGTGTCTTCTaGATGTTGGTAACCTCTGCT +
Preference number: 3 (lower is better)
Translates to: IFLNHPNPSPSRSTRYATALSVF*MLVTSA
Trigger: AGCAGAGGTTACCAACATCAAGAAGACACTCAAAGC...GGTTGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413197.5
3UTR-3UTR CAA 90 bp CCCTTTTCCACAGAGCAGCTGACAGGGGGCTGCATGAAACATACTTTGGAAATTACCAGACCTTTCACTTaGGACATCTTCTTGGTGGGC +
Preference number: 3 (lower is better)
Translates to: PFSTEQLTGGCMKHTLEITRPFT*DIFLVG
Trigger: GCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGGT...AATTTCCAAAGTATGTTTCATGCAGCCCCCTGTCAGCTGCTCTGTGGAAAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413197.5
3UTR-3UTR CAA 90 bp TCATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCATGTTTTGGGATGGCATaGGTGGAGCCCCTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: SCRVLTILLISFFRMSRPCFGMA*VEPLSL
Trigger: CAGACTCAGGGGCTCCACCAATGCCATCCCAAAACA...TGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CAA 90 bp TTCATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCTTTCGCTGGTCCAGCTaGCCCTGGATGATGTCAGTG +
Preference number: 3 (lower is better)
Translates to: FMQGLDNIIDILLSDVTAFRWSS*PWMMSV
Trigger: CACTGACATCATCCAGGGCAAGCTGGACCAGCGAAA...GGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412922.6
ENST00000413197.5
ENST00000449784.5
3UTR TCA 72 bp TTCTTGATGTTGGTAACCTCTGCTTCTACCTGCTGCTaGGTTCGGTTGTGGTTCTCTTTGTACTGGTTGGCT +
Preference number: 3 (lower is better)
Translates to: FLMLVTSASTCC*VRLWFSLYWLA
Trigger: AGCCAACCAGTACAAAGAGAACCACAACCGAACTCAGCAGCAGGTAGAAGCAGAGGTTACCAACATCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CAA 90 bp ACTTTGGAAATTAAAGTGAACTCTCCACTTGGGCATAATGTTATGTGGGCACATGTGTCTGACCCTGTTTaGGGATGGCATTGGTGGAGC +
Preference number: 3 (lower is better)
Translates to: TLEIKVNSPLGHNVMWAHVSDPV*GWHWWS
Trigger: GCTCCACCAATGCCATCCCAAAACAGGGTCAGACAC...ATGTGCCCACATAACATTATGCCCAAGTGGAGAGTTCACTTTAATTTCCAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CAA 90 bp GTAGAAGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATGGATACACTTCATTCTaGATGCCAAGCTCACGATGG +
Preference number: 3 (lower is better)
Translates to: VEEKRKSHCSAWNFSAVNGYTSF*MPSSRW
Trigger: CCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCC...ATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCTTCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449784.5
3UTR-3UTR CAA 90 bp CAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATGCAACCAGACCTTTCACTTaGGACATCTTCTTGGTGGGC +
Preference number: 3 (lower is better)
Translates to: QGLDNIIDILLSDVTANATRPFT*DIFLVG
Trigger: GCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGGT...TGCATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
3UTR-3UTR CAA 90 bp CCTCAAGATCCACCAGGTATGCAACCCCAAACCCCAGTCACATACATTAAATCTGGAGAAATCCATTTTTaGACCATGGCTAAACATGGG +
Preference number: 3 (lower is better)
Translates to: PQDPPGMQPQTPVTYIKSGEIHF*TMAKHG
Trigger: CCCATGTTTAGCCATGGTCAAAAAATGGATTTCTCC...AGATTTAATGTATGTGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR-3UTR CAA 90 bp GGGATGCAGGGAGTGCAACATTTATTTCATAACAGAACCCCTTTTCCACAGAGCTTAAGTCTTTTTCTCTaGCCAGGAGAATGCCATCAT +
Preference number: 3 (lower is better)
Translates to: GMQGVQHLFHNRTPFPQSLSLFL*PGECHH
Trigger: ATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA...GCTCTGTGGAAAAGGGGTTCTGTTATGAAATAAATGTTGCACTCCCTGCATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000611614.4
ENST00000620578.4
3UTR CCA 72 bp TCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTaGTTGTTGTTGTTGTTGTTGTTGTTTAAATCACAA +
Preference number: 3 (lower is better)
Translates to: SAWNFSAVNYVN*LLLLLLLFKSQ
Trigger: TTGTGATTTAAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR TCA 90 bp TTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGTGGGGAGGCGCTGGTaGGGGGACGGGCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FSRQRGIDATIPTQVQPGVGRRW*GDGQVW
Trigger: CCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCAC...TCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGCGGCCTCCCGGCGCCTaGCCGCAGGTTGTCAAGCGT +
Preference number: 4 (lower is better)
Translates to: SADRGASMPPSLPRCSQERPPGA*PQVVKR
Trigger: ACGCTTGACAACCTGCGGGCAGGCGCCGGGAGGCCG...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000620578.4
CDS-3UTR GCA 90 bp ATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGCCGACCCGTCGCCCGTaGAGCTCCCCCGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ITSLHGLNWSCQQGMRQEPTRRP*SSPGSL
Trigger: GAGGCTTCCGGGGGAGCTGCACGGGCGACGGGTCGG...CTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620578.4
CDS-3UTR TCA 90 bp AGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGATGTCCCCTCCCCACCTaGCCCAGGCCTGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: SRQRGIDATIPTQVQPGGCPLPT*PRPGEC
Trigger: GCACTCACCAGGCCTGGGTCAGGTGGGGAGGGGACA...TCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTGGAGCCCCTGAGGTGGGGAGGCGCTGGTaGGGGGACGGGCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: EAGQCLTLFWDGIGGAPEVGRRW*GDGQVW
Trigger: CCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCAC...CTCAGGGGCTCCACCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp ATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGCGGCCTCCCGGCGCCTaGCCGCAGGTTGTCAAGCGT +
Preference number: 4 (lower is better)
Translates to: ITSLHGLNWSCQQGMRQERPPGA*PQVVKR
Trigger: ACGCTTGACAACCTGCGGGCAGGCGCCGGGAGGCCG...CTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CCA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGAGCCGGCAGTTCCAGTaGGCAGCTGGGGCCTACACA +
Preference number: 4 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGSRQFQ*AAGAYT
Trigger: TGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCT...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AACCTCCTGGAGGGAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGGTGGGGAGGCGCTGGTaGGGGGACGGGCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: NLLEGSWAVSDPVLGWHWVGRRW*GDGQVW
Trigger: CCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCAC...CCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGGGACACTCCCGTTCAGCCAGCTGCTGCTCCATCTCCTGAGCCGAGGAGGATGTGTGGTACCAGGGGCTaGAGAGGAGTGCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GDTPVQPAAAPSPEPRRMCGTRG*RGVPPP
Trigger: AGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACA...CATCCTCCTCGGCTCAGGAGATGGAGCAGCAGCTGGCTGAACGGGAGTGTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR TCA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACGTTGTCAAGCGTCCATaGTCACCCCGGCGTCCGGCG +
Preference number: 4 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHVVKRP*SPRRPA
Trigger: CGCCGGACGCCGGGGTGATCATGGACGCTTGACAAC...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp GGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGGAGAGCAGTGAGGGCTaGGCCACTGGTACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GRASISRQFQWAAGAYTPESSEG*ATGTFG
Trigger: GCCAAAGGTACCAGTGGCTCAGCCCTCACTGCTCTC...CGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGATGCTGCTCCATCTCCTaGGCCGAGGAGGATGCGGTG +
Preference number: 4 (lower is better)
Translates to: SRQRGIDATIPTQVQPGGCCSIS*AEEDAV
Trigger: CACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCA...TCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGTGTCCCCTCCCCACCTaGCCCAGGCCTGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQCPLPT*PRPGEC
Trigger: GCACTCACCAGGCCTGGGTCAGGTGGGGAGGGGACA...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGGTGGGGAGGCGCTGGTaGGGGGACGGGCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LKILGEQALAGSSSGQLGVGRRW*GDGQVW
Trigger: CCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCAC...CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGTGGGGAGGCGCTGGTaGGGGGACGGGCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRVGRRW*GDGQVW
Trigger: CCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCAC...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGTGGGGAGGCGCTGGTaGGGGGACGGGCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGVGRRW*GDGQVW
Trigger: CCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCAC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp ACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCGTGGGGAGGCGCTGGTaGGGGGACGGGCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TAPSVCAQIPEVSQPSALVGRRW*GDGQVW
Trigger: CCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCAC...GAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGGGGGACGGGCAGGTCTaGAACTCACTGCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: ADRGASMPPSLPRCSQEEGDGQV*NSLQVE
Trigger: CTCTACCTGCAGTGAGTTCCAGACCTGCCCGTCCCC...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAACAGTACCAACAGGGTaGGGAGGCGCTGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SRQRGIDATIPTQVQPGGTVPTG*GGAGEG
Trigger: CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGT...TCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGGTTCCAGTGGGCAGCTaGGGCCTACACACCGAAAAC +
Preference number: 4 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGVPVGS*GLHTEN
Trigger: GTTTTCGGTGTGTAGGCCCCAGCTGCCCACTGGAAC...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGAGAGAGCAGTGAGGGCTaGGCCACTGGTACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GEQALAGSSSGQLGPTHRESSEG*ATGTFG
Trigger: GCCAAAGGTACCAGTGGCTCAGCCCTCACTGCTCTC...TCGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GCTGCCCCAGCCGGCCCTAGTGGCGGCTGGAGACCAGACCTTTCACTTTGGACAATCACTGCACCATCGTaGGGACTGTGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: AAPAGPSGGWRPDLSLWTITAPS*GLWYQG
Trigger: CCCCTGGTACCACAGTCCTCACGATGGTGCAGTGAT...TGTCCAAAGTGAAAGGTCTGGTCTCCAGCCGCCACTAGGGCCGGCTGGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR TCA 90 bp GGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGATCACTGCACCATCGTaGGGACTGTGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: GRASISRQFQWAAGAYTPITAPS*GLWYQG
Trigger: CCCCTGGTACCACAGTCCTCACGATGGTGCAGTGAT...CGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGGGAAGGAACCATTTCTaGCACCCAGCAGACCCACAG +
Preference number: 4 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGGRNHF*HPADPQ
Trigger: CTGTGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCC...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGTGGACATCTTCTTGGTaGGCTGCCTCTGCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGWTSSW*AASAQR
Trigger: ACGCTGAGCAGAGGCAGCCCACCAAGAAGATGTCCA...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACCCAACAGTACCAACAGGGTaGGGAGGCGCTGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: ARRERQAGRNHFCHPADPTVPTG*GGAGEG
Trigger: CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGT...TGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGGTTCCAGTGGGCAGCTaGGGCCTACACACCGAAAAC +
Preference number: 4 (lower is better)
Translates to: ADRGASMPPSLPRCSQEEVPVGS*GLHTEN
Trigger: GTTTTCGGTGTGTAGGCCCCAGCTGCCCACTGGAAC...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAAGCCGGCAGTTCCAGTaGGCAGCTGGGGCCTACACA +
Preference number: 4 (lower is better)
Translates to: SFSRQRGIDATIPTQVQPSRQFQ*AAGAYT
Trigger: TGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCT...TGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GTGGCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACGAGAGCAGTGAGGGCTaGGCCACTGGTACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: VARRERQAGRNHFCHPADESSEG*ATGTFG
Trigger: GCCAAAGGTACCAGTGGCTCAGCCCTCACTGCTCTC...GTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGTGCTGCTCCATCTCCTaGGCCGAGGAGGATGCGGTG +
Preference number: 4 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQCCSIS*AEEDAV
Trigger: CACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCA...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTGGAGCCCCTGAGTGCTGCTCCATCTCCTaGGCCGAGGAGGATGCGGTG +
Preference number: 4 (lower is better)
Translates to: EAGQCLTLFWDGIGGAPECCSIS*AEEDAV
Trigger: CACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCA...CTCAGGGGCTCCACCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp ACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCTGTCCCCTCCCCACCTaGCCCAGGCCTGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: TAPSVCAQIPEVSQPSALCPLPT*PRPGEC
Trigger: GCACTCACCAGGCCTGGGTCAGGTGGGGAGGGGACA...GAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGAAGCTGGGCAGTGTCTaGCCCTGTTTTGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: ADRGASMPPSLPRCSQEEKLGSV*PCFGMA
Trigger: TGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTT...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGCACCGAAAACAAGGCTaGGTAGTCAGAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GRASISRQFQWAAGAYTPHRKQG*VVRGSR
Trigger: CCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTG...CGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TTCACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTCGGCCTCCCGGCGCCTaGCCGCAGGTTGTCAAGCGT +
Preference number: 4 (lower is better)
Translates to: FTIIPGGWLKLPPAYNQPRPPGA*PQVVKR
Trigger: ACGCTTGACAACCTGCGGGCAGGCGCCGGGAGGCCG...AGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000620578.4
CDS-3UTR GCA 90 bp GTGGCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACCCTTCCGCAAGCTCCTaGACGTTGGCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VARRERQAGRNHFCHPADPSASS*TLASSR
Trigger: TCTGGAGCTGGCCAACGTGCAGGAGCTTGCGGAAGG...GTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
CDS-3UTR GCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGGCCTGAACTGGAGCTaGCAACAAGGGATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SADRGASMPPSLPRCSQEGLNWS*QQGMRQ
Trigger: CTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCC...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GGGGACACTCCCGTTCAGCCAGCTGCTGCTCCATCTCCTGAGCCGAGGAGGATGGGAAGGAACCATTTCTaGCACCCAGCAGACCCACAG +
Preference number: 4 (lower is better)
Translates to: GDTPVQPAAAPSPEPRRMGRNHF*HPADPQ
Trigger: CTGTGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCC...CATCCTCCTCGGCTCAGGAGATGGAGCAGCAGCTGGCTGAACGGGAGTGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGGTCCTCTTAGTCGCTaGCTCGGCCTCCCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGGPLSR*LGLPAP
Trigger: AGGCGCCGGGAGGCCGAGCCAGCGACTAAGAGGACC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CCA 90 bp ACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCGGTCCTCTTAGTCGCTaGCTCGGCCTCCCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: TAPSVCAQIPEVSQPSALGPLSR*LGLPAP
Trigger: AGGCGCCGGGAGGCCGAGCCAGCGACTAAGAGGACC...GAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CCA 90 bp AGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAAGCAGCTGGTTTCGCTaGTCCAGCTTGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: SRQRGIDATIPTQVQPGGSSWFR*SSLPWM
Trigger: CATCCAGGGCAAGCTGGACCAGCGAAACCAGCTGCT...TCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGCTTTGGACATCTTCTTaGTGGGCTGCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGLWTSS*WAASAQ
Trigger: CTGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAG...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ACACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGGGCCCTAGTGGCGGCTaGAGACCAGACCTTTCACTT +
Preference number: 4 (lower is better)
Translates to: TQPSITSLHGLNWSCQQGGPSGG*RPDLSL
Trigger: AAGTGAAAGGTCTGGTCTCCAGCCGCCACTAGGGCC...CCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATAGAGAGGGGAGGAAATaGGCCCTTGGTGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: TAQHHVPPRPELELPTRDREGRK*ALGVPS
Trigger: GGAGGGGACACCAAGGGCCCATTTCCTCCCCTCTCT...ATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACGGGGACGGGCAGGTCTaGAACTCACTGCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHGDGQV*NSLQVE
Trigger: CTCTACCTGCAGTGAGTTCCAGACCTGCCCGTCCCC...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGGGACGGGCAGGTCTaGAACTCACTGCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: FSRQRGIDATIPTQVQPGGDGQV*NSLQVE
Trigger: CTCTACCTGCAGTGAGTTCCAGACCTGCCCGTCCCC...TCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ACACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGCTCCACGGCCTGAACTaGAGCTGCCAACAAGGGATG +
Preference number: 4 (lower is better)
Translates to: TQPSITSLHGLNWSCQQGLHGLN*SCQQGM
Trigger: CATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAG...CCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGAGGCAGCAGGAAGAGTaGCCAGGAGAGAACGCCAAG +
Preference number: 4 (lower is better)
Translates to: SADRGASMPPSLPRCSQERQQEE*PGENAK
Trigger: CTTGGCGTTCTCTCCTGGCCACTCTTCCTGCTGCCT...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTCCAGTGGGCAGCTaGGGCCTACACACCGAAAAC +
Preference number: 4 (lower is better)
Translates to: SRQRGIDATIPTQVQPGGVPVGS*GLHTEN
Trigger: GTTTTCGGTGTGTAGGCCCCAGCTGCCCACTGGAAC...TCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGATCATCAGAGGGCTCTaGGTCATCAGCCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ADRGASMPPSLPRCSQEEIIRGL*VISQGG
Trigger: CCCTCCTTGGCTGATGACCCAGAGCCCTCTGATGAT...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTTGGGAGTTGTCAAGCGTCCATaGTCACCCCGGCGTCCGGCG +
Preference number: 4 (lower is better)
Translates to: SMPPSLPRCSQEELKILGVVKRP*SPRRPA
Trigger: CGCCGGACGCCGGGGTGATCATGGACGCTTGACAAC...TCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGCCAGCTTGCCCTGGATaGTGTCAGTGTAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: SADRGASMPPSLPRCSQEPACPG*CQCRQP
Trigger: AGGCTGTCTACACTGACATCATCCAGGGCAAGCTGG...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGGCTTCTACCTGCTGCTaGGTTCGGTTGTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: GRASISRQFQWAAGAYTPASTCC*VRLWFS
Trigger: AGAGAACCACAACCGAACTCAGCAGCAGGTAGAAGC...CGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGCTGGGCTTAAGAGGCTaGAAACCCGTGGGTTTAGTA +
Preference number: 4 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGLGLRG*KPVGLV
Trigger: TACTAAACCCACGGGTTTTCAGCCTCTTAAGCCCAG...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp ACACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGCACCGAAAACAAGGCTaGGTAGTCAGAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TQPSITSLHGLNWSCQQGHRKQG*VVRGSR
Trigger: CCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTG...CCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTCAGCCAAGGAGGGGTaGAAAGACAGAAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: ADRGASMPPSLPRCSQEESAKEG*KDRSSN
Trigger: GTTGCTGCTTCTGTCTTTTCACCCCTCCTTGGCTGA...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGTCAGCCAAGGAGGGGTaGAAAGACAGAAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: GRASISRQFQWAAGAYTPSAKEG*KDRSSN
Trigger: GTTGCTGCTTCTGTCTTTTCACCCCTCCTTGGCTGA...CGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCCCTTCCGCAAGCTCCTaGACGTTGGCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GASMPPSLPRCSQEELKIPSASS*TLASSR
Trigger: TCTGGAGCTGGCCAACGTGCAGGAGCTTGCGGAAGG...GATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
CDS-3UTR GCA 90 bp GATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGGGAGCCTTCCGCAAGCTCCTaGACGTTGGCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: DGIGGAPESEGNNWGRREPSASS*TLASSR
Trigger: TCTGGAGCTGGCCAACGTGCAGGAGCTTGCGGAAGG...CTCCCTCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
CDS-3UTR GCA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGGCTCTCAGAACTTGCTaGTCGATGCCCAGTAGAACT +
Preference number: 4 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGALRTC*SMPSRT
Trigger: AGTTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGC...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGACTGAGCCGAGGAGGATaGGGTGGCTTTGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GEQALAGSSSGQLGPTHRLSRGG*GGFECL
Trigger: AAGACACTCAAAGCCACCGCATCCTCCTCGGCTCAG...TCGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp ACACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGCTGAGCCGAGGAGGATaGGGTGGCTTTGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: TQPSITSLHGLNWSCQQGLSRGG*GGFECL
Trigger: AAGACACTCAAAGCCACCGCATCCTCCTCGGCTCAG...CCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACGGCCTGAACTGGAGCTaGCAACAAGGGATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHGLNWS*QQGMRQ
Trigger: CTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCC...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGAAGATCCACCAGGTATaGAACCCCAAACCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGKIHQV*NPKPQS
Trigger: TGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTT...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGAGGGAAAGCTCCTTGTTGGCTCCTaGACGTTGGCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PPRPELELPTRDEAGEGKLLVGS*TLASSR
Trigger: TCTGGAGCTGGCCAACGTGCAGGAGCCAACAAGGAG...CTTTCCCTCTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CCA 90 bp GGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGATCCACTTCCAGCAGCTaGTTTCGCTGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GEQALAGSSSGQLGPTHRSTSSS*FRWSSL
Trigger: CAAGCTGGACCAGCGAAACCAGCTGCTGGAAGTGGA...TCGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCTGCCCCAGCCGGCCCTAGTGGCGGCTGGAGACCAGACCTTTCACTTTGGACACTTTGGACATCTTCTTaGTGGGCTGCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: AAPAGPSGGWRPDLSLWTLWTSS*WAASAQ
Trigger: CTGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAG...TGTCCAAAGTGAAAGGTCTGGTCTCCAGCCGCCACTAGGGCCGGCTGGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp ACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGGCCCTAGTGGCGGCTaGAGACCAGACCTTTCACTT +
Preference number: 4 (lower is better)
Translates to: TAQHHVPPRPELELPTRDGPSGG*RPDLSL
Trigger: AAGTGAAAGGTCTGGTCTCCAGCCGCCACTAGGGCC...ATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACAGTACCAACAGGGTaGGGAGGCGCTGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: RSSNRSFSRQRGIDATIPTVPTG*GGAGEG
Trigger: CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGT...AGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGGGACACTCCCGTTCAGCCAGCTGCTGCTCCATCTCCTGAGCCGAGGAGGATGTGTCTGACCCTGTTTTaGGATGGCATTGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: GDTPVQPAAAPSPEPRRMCLTLF*DGIGGA
Trigger: GGCTCCACCAATGCCATCCCAAAACAGGGTCAGACA...CATCCTCCTCGGCTCAGGAGATGGAGCAGCAGCTGGCTGAACGGGAGTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp AGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCTCCTGGAGGGAAGCTaGGCAGTGTCTGACCCTGTT +
Preference number: 4 (lower is better)
Translates to: RSFSRQRGIDATIPTQVQLLEGS*AVSDPV
Trigger: AACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAG...CTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAATCATCCCTGGGGGCTaGTTAAAGCTGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: FSRQRGIDATIPTQVQPGIIPGG*LKLPPA
Trigger: AGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGAT...TCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTTGTGGTACCAGGGGCTaGAGAGGAGTGCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RSSNRSFSRQRGIDATIPCGTRG*RGVPPP
Trigger: AGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACA...AGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCTCCACGGCCTGAACTaGAGCTGCCAACAAGGGATG +
Preference number: 4 (lower is better)
Translates to: RSFSRQRGIDATIPTQVQLHGLN*SCQQGM
Trigger: CATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAG...CTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACCCAAGGCAGCAGGAAGAGTaGCCAGGAGAGAACGCCAAG +
Preference number: 4 (lower is better)
Translates to: ARRERQAGRNHFCHPADPRQQEE*PGENAK
Trigger: CTTGGCGTTCTCTCCTGGCCACTCTTCCTGCTGCCT...TGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTAGCCGGCAGTTCCAGTaGGCAGCTGGGGCCTACACA +
Preference number: 4 (lower is better)
Translates to: RSSNRSFSRQRGIDATIPSRQFQ*AAGAYT
Trigger: TGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCT...AGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGGGAGGCAGGCTCTCCTTGTTaGCTCCTGCACGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: DGIGGAPESEGNNWGRREAGSPC*LLHVGQ
Trigger: CTGGCCAACGTGCAGGAGCCAACAAGGAGAGCCTGC...CTCCCTCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTACACTCCTGCACGTTaGCCAGCTCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: ADRGASMPPSLPRCSQEEYTPAR*PAPEVL
Trigger: GAGAACTTCTGGAGCTGGCCAACGTGCAGGAGTGTA...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611614.4
CDS-3UTR TCA 90 bp ACACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGTTCAGCTTGTTCTGCTaGGCTGTGCTCAGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TQPSITSLHGLNWSCQQGFSLFC*AVLSSG
Trigger: GCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAA...CCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp TCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCACCAGCTTGCCCTGGATaGTGTCAGTGTAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: SFSRQRGIDATIPTQVQPPACPG*CQCRQP
Trigger: AGGCTGTCTACACTGACATCATCCAGGGCAAGCTGG...TGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACCCACCAGCTTGCCCTGGATaGTGTCAGTGTAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: ARRERQAGRNHFCHPADPPACPG*CQCRQP
Trigger: AGGCTGTCTACACTGACATCATCCAGGGCAAGCTGG...TGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGCTTCTACCTGCTGCTaGGTTCGGTTGTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: SADRGASMPPSLPRCSQEASTCC*VRLWFS
Trigger: AGAGAACCACAACCGAACTCAGCAGCAGGTAGAAGC...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGTGCTGCTCCATCTCCTaGGCCGAGGAGGATGCGGTG +
Preference number: 4 (lower is better)
Translates to: LKILGEQALAGSSSGQLGCCSIS*AEEDAV
Trigger: CACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCA...CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGTGCTGCTCCATCTCCTaGGCCGAGGAGGATGCGGTG +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGCCSIS*AEEDAV
Trigger: CACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCA...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGTGCTGCTCCATCTCCTaGGCCGAGGAGGATGCGGTG +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRCCSIS*AEEDAV
Trigger: CACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCA...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp ACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCTGCTGCTCCATCTCCTaGGCCGAGGAGGATGCGGTG +
Preference number: 4 (lower is better)
Translates to: TAPSVCAQIPEVSQPSALCCSIS*AEEDAV
Trigger: CACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCA...GAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp CAAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGTGGGGAGGCGCTGGTaGGGGGACGGGCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QKKNWEGDKPLHRDKNLLVGRRW*GDGQVW
Trigger: CCAGACCTGCCCGTCCCCTCACCAGCGCCTCCCCAC...CAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGCTGGGCTTAAGAGGCTaGAAACCCGTGGGTTTAGTA +
Preference number: 4 (lower is better)
Translates to: GRASISRQFQWAAGAYTPLGLRG*KPVGLV
Trigger: TACTAAACCCACGGGTTTTCAGCCTCTTAAGCCCAG...CGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGTCAGCCAAGGAGGGGTaGAAAGACAGAAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SADRGASMPPSLPRCSQESAKEG*KDRSSN
Trigger: GTTGCTGCTTCTGTCTTTTCACCCCTCCTTGGCTGA...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGCAGCGGGCGGGTTTGTaGATTTGCGCACACTGCGCG +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRQRAGL*ICAHCA
Trigger: CGCGCAGTGTGCGCAAATTCACAAACCCGCCCGCTG...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409295.5
ENST00000611614.4
CDS-3UTR GCA 90 bp GCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAACCTTCCGCAAGCTCCTaGACGTTGGCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: AAGAYTPKTRLSSQRQQEPSASS*TLASSR
Trigger: TCTGGAGCTGGCCAACGTGCAGGAGCTTGCGGAAGG...TTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
CDS-3UTR GCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGGGATGTCACGGCCAATaGAGAAATCCACTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ADRGASMPPSLPRCSQEEGCHGQ*RNPLPA
Trigger: TGCTGGAAGTGGATTTCTGCATTGGCCGTGACATCC...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCACTGAGCCGAGGAGGATaGGGTGGCTTTGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SFSRQRGIDATIPTQVQPLSRGG*GGFECL
Trigger: AAGACACTCAAAGCCACCGCATCCTCCTCGGCTCAG...TGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGCTGGCTAGAAATCACTaGACCATCGTGAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: ADRGASMPPSLPRCSQEELARNH*TIVRTV
Trigger: CACAGTCCTCACGATGGTGCAGTGATTTCTAGCCAG...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGACTCTTGCCAGGAGAATaGCATCATCAGAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GEQALAGSSSGQLGPTHRLLPGE*HHQRAL
Trigger: CAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAG...TCGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTAGCAGCTGGTTTCGCTaGTCCAGCTTGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: QQVLQQTEGHRCHHPYPGSSWFR*SSLPWM
Trigger: CATCCAGGGCAAGCTGGACCAGCGAAACCAGCTGCT...ACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGATGGACATCTTCTTGGTaGGCTGCCTCTGCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: FSRQRGIDATIPTQVQPGWTSSW*AASAQR
Trigger: ACGCTGAGCAGAGGCAGCCCACCAAGAAGATGTCCA...TCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGGCCCTAGTGGCGGCTaGAGACCAGACCTTTCACTT +
Preference number: 4 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQGPSGG*RPDLSL
Trigger: AAGTGAAAGGTCTGGTCTCCAGCCGCCACTAGGGCC...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CCACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCAGAGAGGGGAGGAAATaGGCCCTTGGTGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PQHPLSVLRYQRLVNPALREGRK*ALGVPS
Trigger: GGAGGGGACACCAAGGGCCCATTTCCTCCCCTCTCT...GAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGGGGGACGGGCAGGTCTaGAACTCACTGCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEEGDGQV*NSLQVE
Trigger: CTCTACCTGCAGTGAGTTCCAGACCTGCCCGTCCCC...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGACAGTACCAACAGGGTaGGGAGGCGCTGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGTVPTG*GGAGEG
Trigger: CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGT...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACACAGTACCAACAGGGTaGGGAGGCGCTGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDTVPTG*GGAGEG
Trigger: CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGT...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGACAGTACCAACAGGGTaGGGAGGCGCTGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRTVPTG*GGAGEG
Trigger: CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGT...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGAGGGAAAGTCTGAAGGGAACAACTaGGGAAGGAGGGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PPRPELELPTRDEAGEGKSEGNN*GRREWV
Trigger: CACCCACTCCCTCCTTCCCCAGTTGTTCCCTTCAGA...CTTTCCCTCTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGGGAGCTCCTGGAGGGAAGCTaGGCAGTGTCTGACCCTGTT +
Preference number: 4 (lower is better)
Translates to: DGIGGAPESEGNNWGRRELLEGS*AVSDPV
Trigger: AACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAG...CTCCCTCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGAGACAAGAACCTCCTaGAGGGAAGCTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: FSRQRGIDATIPTQVQPGETRTS*REAGQC
Trigger: ACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTC...TCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACGAGACAAGAACCTCCTaGAGGGAAGCTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHETRTS*REAGQC
Trigger: ACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTC...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCATCATCCCTGGGGGCTaGTTAAAGCTGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: GASMPPSLPRCSQEELKIIIPGG*LKLPPA
Trigger: AGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGAT...GATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCACGTGTGGTACCAGGGGCTaGAGAGGAGTGCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RLKTRGFSKHSPASRPSTCGTRG*RGVPPP
Trigger: AGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACA...CGTGGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATTGTGGTACCAGGGGCTaGAGAGGAGTGCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHCGTRG*RGVPPP
Trigger: AGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACA...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCCTCCACGGCCTGAACTaGAGCTGCCAACAAGGGATG +
Preference number: 4 (lower is better)
Translates to: GASMPPSLPRCSQEELKILHGLN*SCQQGM
Trigger: CATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAG...GATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTTGGGAAGCCGGCAGTTCCAGTaGGCAGCTGGGGCCTACACA +
Preference number: 4 (lower is better)
Translates to: SMPPSLPRCSQEELKILGSRQFQ*AAGAYT
Trigger: TGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCT...TCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACATCATCAGAGGGCTCTaGGTCATCAGCCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHIIRGL*VISQGG
Trigger: CCCTCCTTGGCTGATGACCCAGAGCCCTCTGATGAT...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAATCATCAGAGGGCTCTaGGTCATCAGCCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SFSRQRGIDATIPTQVQPIIRGL*VISQGG
Trigger: CCCTCCTTGGCTGATGACCCAGAGCCCTCTGATGAT...TGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp ACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATCTCCAGGAGATTACTTaGGGGTTTCTGTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: TAQHHVPPRPELELPTRDLQEIT*GFLFPC
Trigger: GCAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAG...ATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATGAGAGCAGTGAGGGCTaGGCCACTGGTACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHESSEG*ATGTFG
Trigger: GCCAAAGGTACCAGTGGCTCAGCCCTCACTGCTCTC...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GTGGCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACTTCAGCTTGTTCTGCTaGGCTGTGCTCAGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: VARRERQAGRNHFCHPADFSLFC*AVLSSG
Trigger: GCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAA...GTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp TTCACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTTGCTGCTCCATCTCCTaGGCCGAGGAGGATGCGGTG +
Preference number: 4 (lower is better)
Translates to: FTIIPGGWLKLPPAYNQPCCSIS*AEEDAV
Trigger: CACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCA...AGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTGGAGCCCCTGAGAAGCTGGGCAGTGTCTaGCCCTGTTTTGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: EAGQCLTLFWDGIGGAPEKLGSV*PCFGMA
Trigger: TGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTT...CTCAGGGGCTCCACCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCAAGCTGGGCAGTGTCTaGCCCTGTTTTGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: GASMPPSLPRCSQEELKIKLGSV*PCFGMA
Trigger: TGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTT...GATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGAAAGCAGCGCATCTTaGCGCCTGGCTAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: SFSRQRGIDATIPTQVQPESSAS*RLARNH
Trigger: GTGATTTCTAGCCAGGCGTCAAGATGCGCTGCTTTC...TGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGCTGGGCTTAAGAGGCTaGAAACCCGTGGGTTTAGTA +
Preference number: 4 (lower is better)
Translates to: SADRGASMPPSLPRCSQELGLRG*KPVGLV
Trigger: TACTAAACCCACGGGTTTTCAGCCTCTTAAGCCCAG...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGACTGGGCTTAAGAGGCTaGAAACCCGTGGGTTTAGTA +
Preference number: 4 (lower is better)
Translates to: SRQRGIDATIPTQVQPGGLGLRG*KPVGLV
Trigger: TACTAAACCCACGGGTTTTCAGCCTCTTAAGCCCAG...TCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGGGAGCACCGAAAACAAGGCTaGGTAGTCAGAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: DGIGGAPESEGNNWGRREHRKQG*VVRGSR
Trigger: CCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTG...CTCCCTCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGATCAGCCAAGGAGGGGTaGAAAGACAGAAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: FSRQRGIDATIPTQVQPGSAKEG*KDRSSN
Trigger: GTTGCTGCTTCTGTCTTTTCACCCCTCCTTGGCTGA...TCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGCAGCGGGCGGGTTTGTaGATTTGCGCACACTGCGCG +
Preference number: 4 (lower is better)
Translates to: ELKILGEQALAGSSSGQLQRAGL*ICAHCA
Trigger: CGCGCAGTGTGCGCAAATTCACAAACCCGCCCGCTG...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611614.4
CDS-3UTR GCA 90 bp CAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTCTGAGCCGAGGAGGATaGGGTGGCTTTGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: QQVLQQTEGHRCHHPYPGLSRGG*GGFECL
Trigger: AAGACACTCAAAGCCACCGCATCCTCCTCGGCTCAG...ACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGGAAGGAACCATTTCTaGCACCCAGCAGACCCACAG +
Preference number: 4 (lower is better)
Translates to: QQVLQQTEGHRCHHPYPGGRNHF*HPADPQ
Trigger: CTGTGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCC...ACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAACTCCTTGTTGGCTCCTaGACGTTGGCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: AAGAYTPKTRLSSQRQQELLVGS*TLASSR
Trigger: TCTGGAGCTGGCCAACGTGCAGGAGCCAACAAGGAG...TTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CCA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACGGAGCCTCTAAGACCTaGCTTATGAGAGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHGASKT*LMRAVR
Trigger: CCTCACTGCTCTCATAAGCCAGGTCTTAGAGGCTCC...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGGCAGGCTCTCCTTGTTaGCTATGTAATCTGGGTATG +
Preference number: 4 (lower is better)
Translates to: ADRGASMPPSLPRCSQEEAGSPC*LCNLGM
Trigger: CATACCCAGATTACATAGCCAACAAGGAGAGCCTGC...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
CDS-3UTR CCA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGAGCAGCTGGTTTCGCTaGTCCAGCTTGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEESSWFR*SSLPWM
Trigger: CATCCAGGGCAAGCTGGACCAGCGAAACCAGCTGCT...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTTCCACTTCCAGCAGCTaGTTTCGCTGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QQVLQQTEGHRCHHPYPGSTSSS*FRWSSL
Trigger: CAAGCTGGACCAGCGAAACCAGCTGCTGGAAGTGGA...ACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCTTTGGACATCTTCTTaGTGGGCTGCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RSFSRQRGIDATIPTQVQLWTSS*WAASAQ
Trigger: CTGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAG...CTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACAGAGAGGGGAGGAAATaGGCCCTTGGTGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDREGRK*ALGVPS
Trigger: GGAGGGGACACCAAGGGCCCATTTCCTCCCCTCTCT...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGAGAGAGGGGAGGAAATaGGCCCTTGGTGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGREGRK*ALGVPS
Trigger: GGAGGGGACACCAAGGGCCCATTTCCTCCCCTCTCT...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCACGAGAGAGGGGAGGAAATaGGCCCTTGGTGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RLKTRGFSKHSPASRPSTREGRK*ALGVPS
Trigger: GGAGGGGACACCAAGGGCCCATTTCCTCCCCTCTCT...CGTGGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTTGGGAAGAGAGGGGAGGAAATaGGCCCTTGGTGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SMPPSLPRCSQEELKILGREGRK*ALGVPS
Trigger: GGAGGGGACACCAAGGGCCCATTTCCTCCCCTCTCT...TCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACGGGGACGGGCAGGTCTaGAACTCACTGCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDGDGQV*NSLQVE
Trigger: CTCTACCTGCAGTGAGTTCCAGACCTGCCCGTCCCC...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGGACGGGCAGGTCTaGAACTCACTGCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRGDGQV*NSLQVE
Trigger: CTCTACCTGCAGTGAGTTCCAGACCTGCCCGTCCCC...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTCTGAAGGGAACAACTaGGGAAGGAGGGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GASMPPSLPRCSQEELKISEGNN*GRREWV
Trigger: CACCCACTCCCTCCTTCCCCAGTTGTTCCCTTCAGA...GATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGTCTGACCCTGTTTTaGGATGGCATTGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: ATGPSADRGASMPPSLPRCLTLF*DGIGGA
Trigger: GGCTCCACCAATGCCATCCCAAAACAGGGTCAGACA...CCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTCTCCTGGAGGGAAGCTaGGCAGTGTCTGACCCTGTT +
Preference number: 4 (lower is better)
Translates to: RSSNRSFSRQRGIDATIPLLEGS*AVSDPV
Trigger: AACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAG...AGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAGACAAGAACCTCCTaGAGGGAAGCTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQETRTS*REAGQC
Trigger: ACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTC...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTATCATCCCTGGGGGCTaGTTAAAGCTGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: RSSNRSFSRQRGIDATIPIIPGG*LKLPPA
Trigger: AGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGAT...AGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGAGGGAAAGCTTCACAATCATCCCTaGGGGCTGGTTAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PPRPELELPTRDEAGEGKLHNHP*GLVKAA
Trigger: GGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAAG...CTTTCCCTCTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATCTTCACAATCATCCCTaGGGGCTGGTTAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TAQHHVPPRPELELPTRDLHNHP*GLVKAA
Trigger: GGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAAG...ATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACAAAATGACGTGGAGCTGTGGTACCAGGGGCTaGAGAGGAGTGCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GWLKLPPAYNQPDKMTWSCGTRG*RGVPPP
Trigger: AGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACA...GCTCCACGTCATTTTGTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AAGAGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCTGTGGTACCAGGGGCTaGAGAGGAGTGCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: KRLKTRGFSKHSPASRPSCGTRG*RGVPPP
Trigger: AGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACA...GGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGGCGCATCTTGACGCCTaGCTAGAAATCACTGCACCA +
Preference number: 4 (lower is better)
Translates to: ATGPSADRGASMPPSLPRAHLDA*LEITAP
Trigger: TGGTGCAGTGATTTCTAGCCAGGCGTCAAGATGCGC...CCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTGGAGCCCCTGAGATCATCAGAGGGCTCTaGGTCATCAGCCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: EAGQCLTLFWDGIGGAPEIIRGL*VISQGG
Trigger: CCCTCCTTGGCTGATGACCCAGAGCCCTCTGATGAT...CTCAGGGGCTCCACCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCGCAGGCTCTCCTTGTTaGCTCCTGCACGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TAPSVCAQIPEVSQPSALAGSPC*LLHVGQ
Trigger: CTGGCCAACGTGCAGGAGCCAACAAGGAGAGCCTGC...GAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp GGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCCTCCAGGAGATTACTTaGGGGTTTCTGTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GASMPPSLPRCSQEELKILQEIT*GFLFPC
Trigger: GCAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAG...GATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGCTCCAGGAGATTACTTaGGGGTTTCTGTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQLQEIT*GFLFPC
Trigger: GCAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAG...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGGGAGCTCCAGGAGATTACTTaGGGGTTTCTGTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: DGIGGAPESEGNNWGRRELQEIT*GFLFPC
Trigger: GCAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAG...CTCCCTCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AAGAGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCGAGAGCAGTGAGGGCTaGGCCACTGGTACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: KRLKTRGFSKHSPASRPSESSEG*ATGTFG
Trigger: GCCAAAGGTACCAGTGGCTCAGCCCTCACTGCTCTC...GGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGGATACACTTCATTCTTaGTGCCAAGCTCACGATGGT +
Preference number: 4 (lower is better)
Translates to: ADRGASMPPSLPRCSQEEDTLHS*CQAHDG
Trigger: ACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATC...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp AGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTCCAGCTTGCCCTGGATaGTGTCAGTGTAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: RSSNRSFSRQRGIDATIPPACPG*CQCRQP
Trigger: AGGCTGTCTACACTGACATCATCCAGGGCAAGCTGG...AGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGTGTCCCCTCCCCACCTaGCCCAGGCCTGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: KRKTGRETSPYTETRTSWCPLPT*PRPGEC
Trigger: GCACTCACCAGGCCTGGGTCAGGTGGGGAGGGGACA...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGATCACTGCACCATCGTaGGGACTGTGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGITAPS*GLWYQG
Trigger: CCCCTGGTACCACAGTCCTCACGATGGTGCAGTGAT...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGATCACTGCACCATCGTaGGGACTGTGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: LKILGEQALAGSSSGQLGITAPS*GLWYQG
Trigger: CCCCTGGTACCACAGTCCTCACGATGGTGCAGTGAT...CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp CAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGAAAGCAGCGCATCTTaGCGCCTGGCTAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: QQVLQQTEGHRCHHPYPGESSAS*RLARNH
Trigger: GTGATTTCTAGCCAGGCGTCAAGATGCGCTGCTTTC...ACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTCACCGAAAACAAGGCTaGGTAGTCAGAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RSSNRSFSRQRGIDATIPHRKQG*VVRGSR
Trigger: CCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTG...AGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GCTGATGGCAAAAAGCCATGTGTAGAAGAAAAACGAAAGAGCCACTGTTCTGCCCGGCCTCCCGGCGCCTaGCCGCAGGTTGTCAAGCGT +
Preference number: 4 (lower is better)
Translates to: ADGKKPCVEEKRKSHCSARPPGA*PQVVKR
Trigger: ACGCTTGACAACCTGCGGGCAGGCGCCGGGAGGCCG...GGCAGAACAGTGGCTCTTTCGTTTTTCTTCTACACATGGCTTTTTGCCATCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000450501.5
CDS-3UTR GCA 90 bp GCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACCCAGGATGTCACGGCCAATaGAGAAATCCACTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ARRERQAGRNHFCHPADPGCHGQ*RNPLPA
Trigger: TGCTGGAAGTGGATTTCTGCATTGGCCGTGACATCC...TGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGAACTTGCTGCTCGATaGCCAGTAGAACTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SFSRQRGIDATIPTQVQPELAAR*PVELLH
Trigger: GTGAAGCAGTTCTACTGGGCATCGAGCAGCAAGTTC...TGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp ATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGGCTCTCAGAACTTGCTaGTCGATGCCCAGTAGAACT +
Preference number: 4 (lower is better)
Translates to: ITSLHGLNWSCQQGMRQEALRTC*SMPSRT
Trigger: AGTTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGC...CTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGAGGGAAAGTTGGCTCTCAGAACTTaGTGCTCGATGCCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: PPRPELELPTRDEAGEGKLALRT*CSMPSR
Trigger: TCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAA...CTTTCCCTCTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACTTGGCTCTCAGAACTTaGTGCTCGATGCCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHLALRT*CSMPSR
Trigger: TCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAA...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CCACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCCTGAGCCGAGGAGGATaGGGTGGCTTTGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: PQHPLSVLRYQRLVNPALLSRGG*GGFECL
Trigger: AAGACACTCAAAGCCACCGCATCCTCCTCGGCTCAG...GAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCACTGGCTAGAAATCACTaGACCATCGTGAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: SFSRQRGIDATIPTQVQPLARNH*TIVRTV
Trigger: CACAGTCCTCACGATGGTGCAGTGATTTCTAGCCAG...TGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGGCCTGAACTGGAGCTaGCAACAAGGGATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGGLNWS*QQGMRQ
Trigger: CTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCCTCTTGCCAGGAGAATaGCATCATCAGAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GASMPPSLPRCSQEELKILLPGE*HHQRAL
Trigger: CAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAG...GATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGCTCTTGCCAGGAGAATaGCATCATCAGAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQLLPGE*HHQRAL
Trigger: CAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAG...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGGGAGGGAGCCTCTAAGACCTaGCTTATGAGAGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: DGIGGAPESEGNNWGRREGASKT*LMRAVR
Trigger: CCTCACTGCTCTCATAAGCCAGGTCTTAGAGGCTCC...CTCCCTCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGCAAGCTCCTGCACGTTaGCCAGCTCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEEQAPAR*PAPEVL
Trigger: GAGAACTTCTGGAGCTGGCCAACGTGCAGGAGCTTG...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
CDS-3UTR CCA 90 bp TTTGGGATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAAGCAGCTGGTTTCGCTaGTCCAGCTTGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: FGMALVEPLSLKGTTGEGSSWFR*SSLPWM
Trigger: CATCCAGGGCAAGCTGGACCAGCGAAACCAGCTGCT...TCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGAGCAGCTGGTTTCGCTaGTCCAGCTTGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRSSWFR*SSLPWM
Trigger: CATCCAGGGCAAGCTGGACCAGCGAAACCAGCTGCT...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACAGCAGCTGGTTTCGCTaGTCCAGCTTGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDSSWFR*SSLPWM
Trigger: CATCCAGGGCAAGCTGGACCAGCGAAACCAGCTGCT...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGTCCACTTCCAGCAGCTaGTTTCGCTGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEESTSSS*FRWSSL
Trigger: CAAGCTGGACCAGCGAAACCAGCTGCTGGAAGTGGA...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AACCTCCTGGAGGGAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTCCACTTCCAGCAGCTaGTTTCGCTGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: NLLEGSWAVSDPVLGWHWSTSSS*FRWSSL
Trigger: CAAGCTGGACCAGCGAAACCAGCTGCTGGAAGTGGA...CCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTTGGACATCTTCTTGGTaGGCTGCCTCTGCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: RSSNRSFSRQRGIDATIPWTSSW*AASAQR
Trigger: ACGCTGAGCAGAGGCAGCCCACCAAGAAGATGTCCA...AGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGGCCCTAGTGGCGGCTaGAGACCAGACCTTTCACTT +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGGPSGG*RPDLSL
Trigger: AAGTGAAAGGTCTGGTCTCCAGCCGCCACTAGGGCC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTGTCTGACCCTGTTTTaGGATGGCATTGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: GASMPPSLPRCSQEELKICLTLF*DGIGGA
Trigger: GGCTCCACCAATGCCATCCCAAAACAGGGTCAGACA...GATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGGGAGTGTCTGACCCTGTTTTaGGATGGCATTGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: DGIGGAPESEGNNWGRRECLTLF*DGIGGA
Trigger: GGCTCCACCAATGCCATCCCAAAACAGGGTCAGACA...CTCCCTCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTTGTCTGACCCTGTTTTaGGATGGCATTGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: QQVLQQTEGHRCHHPYPGCLTLF*DGIGGA
Trigger: GGCTCCACCAATGCCATCCCAAAACAGGGTCAGACA...ACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCTCCTGGAGGGAAGCTaGGCAGTGTCTGACCCTGTT +
Preference number: 4 (lower is better)
Translates to: LKILGEQALAGSSSGQLGLLEGS*AVSDPV
Trigger: AACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAG...CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTTGGGAATCATCCCTGGGGGCTaGTTAAAGCTGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SMPPSLPRCSQEELKILGIIPGG*LKLPPA
Trigger: AGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGAT...TCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTTGGGATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAATCATCCCTGGGGGCTaGTTAAAGCTGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: FGMALVEPLSLKGTTGEGIIPGG*LKLPPA
Trigger: AGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGAT...TCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATCCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTGGAGCCCCTGAGCTTCACAATCATCCCTaGGGGCTGGTTAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: EAGQCLTLFWDGIGGAPELHNHP*GLVKAA
Trigger: GGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAAG...CTCAGGGGCTCCACCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CTAGTTCCCGGAGATTCCGCATCTCCAGGTCTTTCAGCAACACGGAGTAGGGGACTCCACGGCCTGAACTaGAGCTGCCAACAAGGGATG +
Preference number: 4 (lower is better)
Translates to: LVPGDSASPGLSATRSRGLHGLN*SCQQGM
Trigger: CATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAG...TCCCCTACTCCGTGTTGCTGAAAGACCTGGAGATGCGGAATCTCCGGGAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413197.5
CDS-3UTR CCA 90 bp ATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGGCGCTCTCAACTAATTaGAGATCGGAGCTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: ITSLHGLNWSCQQGMRQEALSTN*RSELGL
Trigger: TAAGCCCAGCTCCGATCTCCAATTAGTTGAGAGCGC...CTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGCGCTCTCAACTAATTaGAGATCGGAGCTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: FSRQRGIDATIPTQVQPGALSTN*RSELGL
Trigger: TAAGCCCAGCTCCGATCTCCAATTAGTTGAGAGCGC...TCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAGGCAGCAGGAAGAGTaGCCAGGAGAGAACGCCAAG +
Preference number: 4 (lower is better)
Translates to: TAPSVCAQIPEVSQPSALRQQEE*PGENAK
Trigger: CTTGGCGTTCTCTCCTGGCCACTCTTCCTGCTGCCT...GAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGAGGCAGCAGGAAGAGTaGCCAGGAGAGAACGCCAAG +
Preference number: 4 (lower is better)
Translates to: LKILGEQALAGSSSGQLGRQQEE*PGENAK
Trigger: CTTGGCGTTCTCTCCTGGCCACTCTTCCTGCTGCCT...CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACGTTCCAGTGGGCAGCTaGGGCCTACACACCGAAAAC +
Preference number: 4 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDVPVGS*GLHTEN
Trigger: GTTTTCGGTGTGTAGGCCCCAGCTGCCCACTGGAAC...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCGGTGGCTTTGAGTGTCTTCTTGATGTTGGTAACCTCTGCTTCTACCTGCTGCAGCCGGCAGTTCCAGTaGGCAGCTGGGGCCTACACA +
Preference number: 4 (lower is better)
Translates to: AVALSVFLMLVTSASTCCSRQFQ*AAGAYT
Trigger: TGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCT...GCAGCAGGTAGAAGCAGAGGTTACCAACATCAAGAAGACACTCAAAGCCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp TTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGAAGGGTCTTCCCGTTaGGTTTCAAGTCTCGGGATT +
Preference number: 4 (lower is better)
Translates to: FSRQRGIDATIPTQVQPGEGSSR*VSSLGI
Trigger: AATCCCGAGACTTGAAACCCAACGGGAAGACCCTTC...TCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611614.4
CDS-3UTR TCA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGTTCAGCTTGTTCTGCTaGGCTGTGCTCAGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEEFSLFC*AVLSSG
Trigger: GCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAA...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp ACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCCCAGCTTGCCCTGGATaGTGTCAGTGTAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: TAPSVCAQIPEVSQPSALPACPG*CQCRQP
Trigger: AGGCTGTCTACACTGACATCATCCAGGGCAAGCTGG...GAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGCCAGCTTGCCCTGGATaGTGTCAGTGTAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGPACPG*CQCRQP
Trigger: AGGCTGTCTACACTGACATCATCCAGGGCAAGCTGG...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGACCAGCCTGACAAAATaGCGTGGAGCAAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: GRASISRQFQWAAGAYTPTSLTK*RGAKEK
Trigger: TTTTTCTTTTGCTCCACGTCATTTTGTCAGGCTGGT...CGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGCACCGAAAACAAGGCTaGGTAGTCAGAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRHRKQG*VVRGSR
Trigger: CCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTG...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GTATGTCCCATAGGCAAACAGGTTCAACAACTGCAAATAAGCAGCATTAGCTCCCGGCCTCCCGGCGCCTaGCCGCAGGTTGTCAAGCGT +
Preference number: 4 (lower is better)
Translates to: VCPIGKQVQQLQISSISSRPPGA*PQVVKR
Trigger: ACGCTTGACAACCTGCGGGCAGGCGCCGGGAGGCCG...GGAGCTAATGCTGCTTATTTGCAGTTGTTGAACCTGTTTGCCTATGGGACATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432387.5
CDS-3UTR GCA 90 bp CAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGGATGTCACGGCCAATaGAGAAATCCACTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QQVLQQTEGHRCHHPYPGGCHGQ*RNPLPA
Trigger: TGCTGGAAGTGGATTTCTGCATTGGCCGTGACATCC...ACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCGGATGTCACGGCCAATaGAGAAATCCACTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GASMPPSLPRCSQEELKIGCHGQ*RNPLPA
Trigger: TGCTGGAAGTGGATTTCTGCATTGGCCGTGACATCC...GATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGGATGTCACGGCCAATaGAGAAATCCACTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQGCHGQ*RNPLPA
Trigger: TGCTGGAAGTGGATTTCTGCATTGGCCGTGACATCC...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGGATGTTGGTAACCTCTaGTTCTACCTGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ATGPSADRGASMPPSLPRDVGNL*FYLLLS
Trigger: ACTCAGCAGCAGGTAGAAGCAGAGGTTACCAACATC...CCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGCTGAGCCGAGGAGGATaGGGTGGCTTTGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRLSRGG*GGFECL
Trigger: AAGACACTCAAAGCCACCGCATCCTCCTCGGCTCAG...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TTTGGGATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGACTGAGCCGAGGAGGATaGGGTGGCTTTGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: FGMALVEPLSLKGTTGEGLSRGG*GGFECL
Trigger: AAGACACTCAAAGCCACCGCATCCTCCTCGGCTCAG...TCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTCTGGCTAGAAATCACTaGACCATCGTGAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: QQVLQQTEGHRCHHPYPGLARNH*TIVRTV
Trigger: CACAGTCCTCACGATGGTGCAGTGATTTCTAGCCAG...ACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TTCACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGGCCTGAACTGGAGCTaGCAACAAGGGATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FTIIPGGWLKLPPAYNQPGLNWS*QQGMRQ
Trigger: CTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCC...AGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACAAAATGACGTGGAGCGGCCTGAACTGGAGCTaGCAACAAGGGATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GWLKLPPAYNQPDKMTWSGLNWS*QQGMRQ
Trigger: CTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCC...GCTCCACGTCATTTTGTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TTTGGGATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGGAAGGAACCATTTCTaGCACCCAGCAGACCCACAG +
Preference number: 4 (lower is better)
Translates to: FGMALVEPLSLKGTTGEGGRNHF*HPADPQ
Trigger: CTGTGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCC...TCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCACGGGAAGGAACCATTTCTaGCACCCAGCAGACCCACAG +
Preference number: 4 (lower is better)
Translates to: RLKTRGFSKHSPASRPSTGRNHF*HPADPQ
Trigger: CTGTGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCC...CGTGGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp ACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATACGTTTTTCCCTCTCTaGTTCTACCTGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: TAQHHVPPRPELELPTRDTFFPL*FYLLLS
Trigger: ACTCAGCAGCAGGTAGAAGCAGAGAGGGAAAAACGT...ATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373608.7
CDS-3UTR CCA 90 bp GCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGGAGCCTCTAAGACCTaGCTTATGAGAGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: AAGAYTPKTRLSSQRQQEGASKT*LMRAVR
Trigger: CCTCACTGCTCTCATAAGCCAGGTCTTAGAGGCTCC...TTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGGGAGCCTCTAAGACCTaGCTTATGAGAGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEEGASKT*LMRAVR
Trigger: CCTCACTGCTCTCATAAGCCAGGTCTTAGAGGCTCC...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCAAGCTCCTGCACGTTaGCCAGCTCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHQAPAR*PAPEVL
Trigger: GAGAACTTCTGGAGCTGGCCAACGTGCAGGAGCTTG...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
CDS-3UTR CCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGGTTGGCTATGTAATCTaGGTATGTCCCATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: ADRGASMPPSLPRCSQEEVGYVI*VCPIGK
Trigger: TTTGCCTATGGGACATACCCAGATTACATAGCCAAC...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
CDS-3UTR CCA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACGCAGGCTCTCCTTGTTaGCTATGTAATCTGGGTATG +
Preference number: 4 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHAGSPC*LCNLGM
Trigger: CATACCCAGATTACATAGCCAACAAGGAGAGCCTGC...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
CDS-3UTR CCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGTCCACTTCCAGCAGCTaGTTTCGCTGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRSTSSS*FRWSSL
Trigger: CAAGCTGGACCAGCGAAACCAGCTGCTGGAAGTGGA...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACTCCACTTCCAGCAGCTaGTTTCGCTGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDSTSSS*FRWSSL
Trigger: CAAGCTGGACCAGCGAAACCAGCTGCTGGAAGTGGA...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGTGGTTCTCTTTGTACTaGTTGGCTCTCAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: SADRGASMPPSLPRCSQEWFSLY*LALRTC
Trigger: GCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCA...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGTGGACATCTTCTTGGTaGGCTGCCTCTGCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: LKILGEQALAGSSSGQLGWTSSW*AASAQR
Trigger: ACGCTGAGCAGAGGCAGCCCACCAAGAAGATGTCCA...CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTTGGGATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGATGGACATCTTCTTGGTaGGCTGCCTCTGCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: FGMALVEPLSLKGTTGEGWTSSW*AASAQR
Trigger: ACGCTGAGCAGAGGCAGCCCACCAAGAAGATGTCCA...TCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGTGGACATCTTCTTGGTaGGCTGCCTCTGCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRWTSSW*AASAQR
Trigger: ACGCTGAGCAGAGGCAGCCCACCAAGAAGATGTCCA...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAACTTTGGACATCTTCTTaGTGGGCTGCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: AAGAYTPKTRLSSQRQQELWTSS*WAASAQ
Trigger: CTGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAG...TTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGCCAGACCTTTCACTTTaGACATCTTCTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: ATGPSADRGASMPPSLPRPDLSL*TSSWWA
Trigger: AGCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGG...CCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATCCAGACCTTTCACTTTaGACATCTTCTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: TAQHHVPPRPELELPTRDPDLSL*TSSWWA
Trigger: AGCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGG...ATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGTGTCTGACCCTGTTTTaGGATGGCATTGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEECLTLF*DGIGGA
Trigger: GGCTCCACCAATGCCATCCCAAAACAGGGTCAGACA...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTCACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTCTCCTGGAGGGAAGCTaGGCAGTGTCTGACCCTGTT +
Preference number: 4 (lower is better)
Translates to: FTIIPGGWLKLPPAYNQPLLEGS*AVSDPV
Trigger: AACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAG...AGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCACGGAGACAAGAACCTCCTaGAGGGAAGCTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: RLKTRGFSKHSPASRPSTETRTS*REAGQC
Trigger: ACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTC...CGTGGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTGGAGCCCCTGAGGCGCTCTCAACTAATTaGAGATCGGAGCTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: EAGQCLTLFWDGIGGAPEALSTN*RSELGL
Trigger: TAAGCCCAGCTCCGATCTCCAATTAGTTGAGAGCGC...CTCAGGGGCTCCACCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTCACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGTTCCAGTGGGCAGCTaGGGCCTACACACCGAAAAC +
Preference number: 4 (lower is better)
Translates to: FTIIPGGWLKLPPAYNQPVPVGS*GLHTEN
Trigger: GTTTTCGGTGTGTAGGCCCCAGCTGCCCACTGGAAC...AGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGATCATCAGAGGGCTCTaGGTCATCAGCCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRIIRGL*VISQGG
Trigger: CCCTCCTTGGCTGATGACCCAGAGCCCTCTGATGAT...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTTGGGATTGGCTCCTGCACGTTaGCCAGCTCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SMPPSLPRCSQEELKILGLAPAR*PAPEVL
Trigger: GAGAACTTCTGGAGCTGGCCAACGTGCAGGAGCCAA...TCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp GAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTGTTGTCAAGCGTCCATaGTCACCCCGGCGTCCGGCG +
Preference number: 4 (lower is better)
Translates to: ERATVLPGTSLLSITLTGVVKRP*SPRRPA
Trigger: CGCCGGACGCCGGGGTGATCATGGACGCTTGACAAC...ACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000450501.5
CDS-3UTR TCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGCTCCAGGAGATTACTTaGGGGTTTCTGTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRLQEIT*GFLFPC
Trigger: GCAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAG...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AAACAGCATCACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCGAGAGCAGTGAGGGCTaGGCCACTGGTACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: KQHHIFLNHPNPSPSRSTESSEG*ATGTFG
Trigger: GCCAAAGGTACCAGTGGCTCAGCCCTCACTGCTCTC...GGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTGATGCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGTTCAGCTTGTTCTGCTaGGCTGTGCTCAGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGFSLFC*AVLSSG
Trigger: GCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAA...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp ATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGGATACACTTCATTCTTaGTGCCAAGCTCACGATGGT +
Preference number: 4 (lower is better)
Translates to: ITSLHGLNWSCQQGMRQEDTLHS*CQAHDG
Trigger: ACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATC...CTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGCTTCTACCTGCTGCTaGGTTCGGTTGTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRASTCC*VRLWFS
Trigger: AGAGAACCACAACCGAACTCAGCAGCAGGTAGAAGC...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTTGGGAGCTTCTACCTGCTGCTaGGTTCGGTTGTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: SMPPSLPRCSQEELKILGASTCC*VRLWFS
Trigger: AGAGAACCACAACCGAACTCAGCAGCAGGTAGAAGC...TCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp ACACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGACCAGCCTGACAAAATaGCGTGGAGCAAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: TQPSITSLHGLNWSCQQGTSLTK*RGAKEK
Trigger: TTTTTCTTTTGCTCCACGTCATTTTGTCAGGCTGGT...CCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATGAAAGCAGCGCATCTTaGCGCCTGGCTAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHESSAS*RLARNH
Trigger: GTGATTTCTAGCCAGGCGTCAAGATGCGCTGCTTTC...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGTCAGCCAAGGAGGGGTaGAAAGACAGAAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGSAKEG*KDRSSN
Trigger: GTTGCTGCTTCTGTCTTTTCACCCCTCCTTGGCTGA...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGCCATTCTCTGGCCTTaGAATCATGATTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: FSRQRGIDATIPTQVQPGAILWP*NHDLQM
Trigger: CATCTGCAAATCATGATTTCAAGGCCAGAGAATGGC...TCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611614.4
CDS-3UTR GCA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGCCATCACACCATTCATaGAGGGTCTTGACAATATTA +
Preference number: 4 (lower is better)
Translates to: ADRGASMPPSLPRCSQEEPSHHS*RVLTIL
Trigger: TAATATTGTCAAGACCCTGCATGAATGGTGTGATGG...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AACCTCCTGGAGGGAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGGCTCTCAGAACTTGCTaGTCGATGCCCAGTAGAACT +
Preference number: 4 (lower is better)
Translates to: NLLEGSWAVSDPVLGWHWALRTC*SMPSRT
Trigger: AGTTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGC...CCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AACCTCCTGGAGGGAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTTGGCTCTCAGAACTTaGTGCTCGATGCCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: NLLEGSWAVSDPVLGWHWLALRT*CSMPSR
Trigger: TCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAA...CCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp ATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCAACCGGCCTGAACTGGAGCTaGCAACAAGGGATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: IFLNHPNPSPSRSTRYATGLNWS*QQGMRQ
Trigger: CTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCC...GGTTGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGCTCTTGCCAGGAGAATaGCATCATCAGAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGLLPGE*HHQRAL
Trigger: CAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAG...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACCTCTTGCCAGGAGAATaGCATCATCAGAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDLLPGE*HHQRAL
Trigger: CAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAG...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAAAGATCCACCAGGTATaGAACCCCAAACCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: AAGAYTPKTRLSSQRQQEKIHQV*NPKPQS
Trigger: TGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTT...TTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CTCCACTTGGGCATAATGTTATGTGGGCACATGGATTGGCTTAAAAGGGAAACAGGTCCTCTTAGTCGCTaGCTCGGCCTCCCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LHLGIMLCGHMDWLKRETGPLSR*LGLPAP
Trigger: AGGCGCCGGGAGGCCGAGCCAGCGACTAAGAGGACC...TGTTTCCCTTTTAAGCCAATCCATGTGCCCACATAACATTATGCCCAAGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CCA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATGGAGCCTCTAAGACCTaGCTTATGAGAGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHGASKT*LMRAVR
Trigger: CCTCACTGCTCTCATAAGCCAGGTCTTAGAGGCTCC...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTCACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTCAAGCTCCTGCACGTTaGCCAGCTCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: FTIIPGGWLKLPPAYNQPQAPAR*PAPEVL
Trigger: GAGAACTTCTGGAGCTGGCCAACGTGCAGGAGCTTG...AGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
CDS-3UTR CCA 90 bp GGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACAAAATGACGTGGAGCCAAGCTCCTGCACGTTaGCCAGCTCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: GWLKLPPAYNQPDKMTWSQAPAR*PAPEVL
Trigger: GAGAACTTCTGGAGCTGGCCAACGTGCAGGAGCTTG...GCTCCACGTCATTTTGTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
CDS-3UTR CCA 90 bp GGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCGCAGGCTCTCCTTGTTaGCTATGTAATCTGGGTATG +
Preference number: 4 (lower is better)
Translates to: GASMPPSLPRCSQEELKIAGSPC*LCNLGM
Trigger: CATACCCAGATTACATAGCCAACAAGGAGAGCCTGC...GATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
CDS-3UTR CCA 90 bp TCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCATCTCTTTGTACTGGTTaGCTCTCAGAACTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SFSRQRGIDATIPTQVQPSLCTG*LSELAA
Trigger: AGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGA...TGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGCTTTGGACATCTTCTTaGTGGGCTGCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGLWTSS*WAASAQ
Trigger: CTGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAG...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTGGAGCCCCTGAGCCAGACCTTTCACTTTaGACATCTTCTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: EAGQCLTLFWDGIGGAPEPDLSL*TSSWWA
Trigger: AGCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGG...CTCAGGGGCTCCACCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CTGCTGAGTTCGGTTGTGGTTCTCTTTGTACTGGTTGGCTCTCAGAACTTGCTGAGAGAGGGGAGGAAATaGGCCCTTGGTGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LLSSVVVLFVLVGSQNLLREGRK*ALGVPS
Trigger: GGAGGGGACACCAAGGGCCCATTTCCTCCCCTCTCT...CAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCACAACCGAACTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp GCGGTGGCTTTGAGTGTCTTCTTGATGTTGGTAACCTCTGCTTCTACCTGCTGCATCATCCCTGGGGGCTaGTTAAAGCTGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: AVALSVFLMLVTSASTCCIIPGG*LKLPPA
Trigger: AGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGAT...GCAGCAGGTAGAAGCAGAGGTTACCAACATCAAGAAGACACTCAAAGCCACCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCTTCACAATCATCCCTaGGGGCTGGTTAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHLHNHP*GLVKAA
Trigger: GGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAAG...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGTGTGGTACCAGGGGCTaGAGAGGAGTGCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: KRKTGRETSPYTETRTSWCGTRG*RGVPPP
Trigger: AGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACA...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGGCGCATCTTGACGCCTaGCTAGAAATCACTGCACCA +
Preference number: 4 (lower is better)
Translates to: LKILGEQALAGSSSGQLGAHLDA*LEITAP
Trigger: TGGTGCAGTGATTTCTAGCCAGGCGTCAAGATGCGC...CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATGCGCATCTTGACGCCTaGCTAGAAATCACTGCACCA +
Preference number: 4 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHAHLDA*LEITAP
Trigger: TGGTGCAGTGATTTCTAGCCAGGCGTCAAGATGCGC...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGCGCATCTTGACGCCTaGCTAGAAATCACTGCACCA +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRAHLDA*LEITAP
Trigger: TGGTGCAGTGATTTCTAGCCAGGCGTCAAGATGCGC...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGCGCATCTTGACGCCTaGCTAGAAATCACTGCACCA +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGAHLDA*LEITAP
Trigger: TGGTGCAGTGATTTCTAGCCAGGCGTCAAGATGCGC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCAAGGCAGCAGGAAGAGTaGCCAGGAGAGAACGCCAAG +
Preference number: 4 (lower is better)
Translates to: HIFLNHPNPSPSRSTRYARQQEE*PGENAK
Trigger: CTTGGCGTTCTCTCCTGGCCACTCTTCCTGCTGCCT...TGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGTGTTATGTGGGCACATaGATTGGCTTAAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: GRASISRQFQWAAGAYTPCYVGT*IGLKGK
Trigger: TTTCCCTTTTAAGCCAATCCATGTGCCCACATAACA...CGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGCACTGCGCGGCACACTaGAGTCTAAGTTACAGAGGA +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRHCAAH*SLSYRG
Trigger: TCCTCTGTAACTTAGACTCCAGTGTGCCGCGCAGTG...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409295.5
ENST00000611614.4
CDS-3UTR TCA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGCTCCAGGAGATTACTTaGGGGTTTCTGTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: ELKILGEQALAGSSSGQLLQEIT*GFLFPC
Trigger: GCAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAG...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGTTCAGCTTGTTCTGCTaGGCTGTGCTCAGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: ELKILGEQALAGSSSGQLFSLFC*AVLSSG
Trigger: GCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAA...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp GATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGGGAGGATACACTTCATTCTTaGTGCCAAGCTCACGATGGT +
Preference number: 4 (lower is better)
Translates to: DGIGGAPESEGNNWGRREDTLHS*CQAHDG
Trigger: ACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATC...CTCCCTCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp AAGAGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCGCTTCTACCTGCTGCTaGGTTCGGTTGTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KRLKTRGFSKHSPASRPSASTCC*VRLWFS
Trigger: AGAGAACCACAACCGAACTCAGCAGCAGGTAGAAGC...GGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TTTGGGATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGACTGGGCTTAAGAGGCTaGAAACCCGTGGGTTTAGTA +
Preference number: 4 (lower is better)
Translates to: FGMALVEPLSLKGTTGEGLGLRG*KPVGLV
Trigger: TACTAAACCCACGGGTTTTCAGCCTCTTAAGCCCAG...TCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TGTGCTCAGTTCTGGCAGGCTCTCCTTGTTGGCTCAAGTGATCTGCCTGCCTCGACCGCGCCCAGCCTATaGGTGACTTTTAAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: CAQFWQALLVGSSDLPASTAPSL*VTFKKS
Trigger: AGACTTTTTAAAAGTCACTCATAGGCTGGGCGCGGT...CGAGGCAGGCAGATCACTTGAGCCAACAAGGAGAGCCTGCCAGAACTGAGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436564.5
CDS-3UTR GCA 90 bp GGTCTTTCAGCAACACGGAGTAGGGGATACACTTCATTCTTGATGCCAAGCTCACCTTCCGCAAGCTCCTaGACGTTGGCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GLSATRSRGYTSFLMPSSPSASS*TLASSR
Trigger: TCTGGAGCTGGCCAACGTGCAGGAGCTTGCGGAAGG...TGAGCTTGGCATCAAGAATGAAGTGTATCCCCTACTCCGTGTTGCTGAAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436564.5
CDS-3UTR GCA 90 bp TCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTTGGGAGGATGTCACGGCCAATaGAGAAATCCACTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SMPPSLPRCSQEELKILGGCHGQ*RNPLPA
Trigger: TGCTGGAAGTGGATTTCTGCATTGGCCGTGACATCC...TCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGATGTCACGGCCAATaGAGAAATCCACTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRGCHGQ*RNPLPA
Trigger: TGCTGGAAGTGGATTTCTGCATTGGCCGTGACATCC...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGGGATGTCACGGCCAATaGAGAAATCCACTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LKILGEQALAGSSSGQLGGCHGQ*RNPLPA
Trigger: TGCTGGAAGTGGATTTCTGCATTGGCCGTGACATCC...CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATGAACTTGCTGCTCGATaGCCAGTAGAACTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHELAAR*PVELLH
Trigger: GTGAAGCAGTTCTACTGGGCATCGAGCAGCAAGTTC...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGAACTTGCTGCTCGATaGCCAGTAGAACTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGELAAR*PVELLH
Trigger: GTGAAGCAGTTCTACTGGGCATCGAGCAGCAAGTTC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGCTCTCAGAACTTGCTaGTCGATGCCCAGTAGAACT +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGALRTC*SMPSRT
Trigger: AGTTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGCTCTCAGAACTTGCTaGTCGATGCCCAGTAGAACT +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRALRTC*SMPSRT
Trigger: AGTTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGC...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGTTGGCTCTCAGAACTTaGTGCTCGATGCCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGLALRT*CSMPSR
Trigger: TCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAA...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGTTGGCTCTCAGAACTTaGTGCTCGATGCCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRLALRT*CSMPSR
Trigger: TCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAA...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTTGGGATTGGCTCTCAGAACTTaGTGCTCGATGCCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SMPPSLPRCSQEELKILGLALRT*CSMPSR
Trigger: TCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAA...TCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp ACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCTTGGCTCTCAGAACTTaGTGCTCGATGCCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: TAPSVCAQIPEVSQPSALLALRT*CSMPSR
Trigger: TCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAA...GAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGATGTTGGTAACCTCTaGTTCTACCTGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: AAGAYTPKTRLSSQRQQEDVGNL*FYLLLS
Trigger: ACTCAGCAGCAGGTAGAAGCAGAGGTTACCAACATC...TTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGCTGGCTAGAAATCACTaGACCATCGTGAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGLARNH*TIVRTV
Trigger: CACAGTCCTCACGATGGTGCAGTGATTTCTAGCCAG...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCTGGCTAGAAATCACTaGACCATCGTGAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHLARNH*TIVRTV
Trigger: CACAGTCCTCACGATGGTGCAGTGATTTCTAGCCAG...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACAAAATGACGTGGAGCCTCTTGCCAGGAGAATaGCATCATCAGAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GWLKLPPAYNQPDKMTWSLLPGE*HHQRAL
Trigger: CAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAG...GCTCCACGTCATTTTGTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACAAGATCCACCAGGTATaGAACCCCAAACCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDKIHQV*NPKPQS
Trigger: TGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTT...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGCAGCTGACAGGGGGCTaGATGAAACATACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEEQLTGG*MKHTLE
Trigger: TTCCAAAGTATGTTTCATGCAGCCCCCTGTCAGCTG...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GTCTTCACTGATGCTGATGGCAAAAAGCCATGTGTAGAAGAAAAACGAAAGAGCGGTCCTCTTAGTCGCTaGCTCGGCCTCCCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: VFTDADGKKPCVEEKRKSGPLSR*LGLPAP
Trigger: AGGCGCCGGGAGGCCGAGCCAGCGACTAAGAGGACC...GCTCTTTCGTTTTTCTTCTACACATGGCTTTTTGCCATCAGCATCAGTGAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000450501.5
CDS-3UTR CCA 90 bp GCGGTGGCTTTGAGTGTCTTCTTGATGTTGGTAACCTCTGCTTCTACCTGCTGCTCCACTTCCAGCAGCTaGTTTCGCTGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AVALSVFLMLVTSASTCCSTSSS*FRWSSL
Trigger: CAAGCTGGACCAGCGAAACCAGCTGCTGGAAGTGGA...GCAGCAGGTAGAAGCAGAGGTTACCAACATCAAGAAGACACTCAAAGCCACCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp CACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCATCCACTTCCAGCAGCTaGTTTCGCTGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: HIFLNHPNPSPSRSTRYASTSSS*FRWSSL
Trigger: CAAGCTGGACCAGCGAAACCAGCTGCTGGAAGTGGA...TGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTGGAGCCCCTGAGTCTCTTTGTACTGGTTaGCTCTCAGAACTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: EAGQCLTLFWDGIGGAPESLCTG*LSELAA
Trigger: AGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGA...CTCAGGGGCTCCACCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGTGGTTCTCTTTGTACTaGTTGGCTCTCAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQWFSLY*LALRTC
Trigger: GCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCA...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGCTTTGGACATCTTCTTaGTGGGCTGCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ELKILGEQALAGSSSGQLLWTSS*WAASAQ
Trigger: CTGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAG...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CTGCTGAGTTCGGTTGTGGTTCTCTTTGTACTGGTTGGCTCTCAGAACTTGCTGGGCCCTAGTGGCGGCTaGAGACCAGACCTTTCACTT +
Preference number: 4 (lower is better)
Translates to: LLSSVVVLFVLVGSQNLLGPSGG*RPDLSL
Trigger: AAGTGAAAGGTCTGGTCTCCAGCCGCCACTAGGGCC...CAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCACAACCGAACTCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp CACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCATCTGAAGGGAACAACTaGGGAAGGAGGGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HIFLNHPNPSPSRSTRYASEGNN*GRREWV
Trigger: CACCCACTCCCTCCTTCCCCAGTTGTTCCCTTCAGA...TGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGTGTCTGACCCTGTTTTaGGATGGCATTGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: ELKILGEQALAGSSSGQLCLTLF*DGIGGA
Trigger: GGCTCCACCAATGCCATCCCAAAACAGGGTCAGACA...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CTGCTGAGTTCGGTTGTGGTTCTCTTTGTACTGGTTGGCTCTCAGAACTTGCTGCTCCTGGAGGGAAGCTaGGCAGTGTCTGACCCTGTT +
Preference number: 4 (lower is better)
Translates to: LLSSVVVLFVLVGSQNLLLLEGS*AVSDPV
Trigger: AACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAG...CAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCACAACCGAACTCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp AAACAGCATCACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCATCATCCCTGGGGGCTaGTTAAAGCTGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: KQHHIFLNHPNPSPSRSTIIPGG*LKLPPA
Trigger: AGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGAT...GGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTGATGCTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AAACAGCATCACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCCTCCACGGCCTGAACTaGAGCTGCCAACAAGGGATG +
Preference number: 4 (lower is better)
Translates to: KQHHIFLNHPNPSPSRSTLHGLN*SCQQGM
Trigger: CATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAG...GGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTGATGCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCACGGCGCTCTCAACTAATTaGAGATCGGAGCTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: RLKTRGFSKHSPASRPSTALSTN*RSELGL
Trigger: TAAGCCCAGCTCCGATCTCCAATTAGTTGAGAGCGC...CGTGGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACGCGCTCTCAACTAATTaGAGATCGGAGCTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDALSTN*RSELGL
Trigger: TAAGCCCAGCTCCGATCTCCAATTAGTTGAGAGCGC...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGAGGCAGCAGGAAGAGTaGCCAGGAGAGAACGCCAAG +
Preference number: 4 (lower is better)
Translates to: LRYQRLVNPALSTNWRSERQQEE*PGENAK
Trigger: CTTGGCGTTCTCTCCTGGCCACTCTTCCTGCTGCCT...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GAGTTCGGTTGTGGTTCTCTTTGTACTGGTTGGCTCTCAGAACTTGCTGCTCGAAGGCAGCAGGAAGAGTaGCCAGGAGAGAACGCCAAG +
Preference number: 4 (lower is better)
Translates to: EFGCGSLCTGWLSELAARRQQEE*PGENAK
Trigger: CTTGGCGTTCTCTCCTGGCCACTCTTCCTGCTGCCT...TCGAGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCACAACCGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGTGTTATGTGGGCACATaGATTGGCTTAAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SADRGASMPPSLPRCSQECYVGT*IGLKGK
Trigger: TTTCCCTTTTAAGCCAATCCATGTGCCCACATAACA...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGAAGGGTCTTCCCGTTaGGTTTCAAGTCTCGGGATT +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVREGSSR*VSSLGI
Trigger: AATCCCGAGACTTGAAACCCAACGGGAAGACCCTTC...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409295.5
ENST00000611614.4
CDS-3UTR TCA 90 bp GATGCTGATGGCAAAAAGCCATGTGTAGAAGAAAAACGAAAGAGCCACTGTTCTGTTGTCAAGCGTCCATaGTCACCCCGGCGTCCGGCG +
Preference number: 4 (lower is better)
Translates to: DADGKKPCVEEKRKSHCSVVKRP*SPRRPA
Trigger: CGCCGGACGCCGGGGTGATCATGGACGCTTGACAAC...AGAACAGTGGCTCTTTCGTTTTTCTTCTACACATGGCTTTTTGCCATCAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000450501.5
CDS-3UTR TCA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGGCCATTCTCTGGCCTTaGAATCTGTCCACGCCACCT +
Preference number: 4 (lower is better)
Translates to: LRYQRLVNPALSTNWRSEAILWP*NLSTPP
Trigger: AGGTGGCGTGGACAGATTTCAAGGCCAGAGAATGGC...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp CAACTGCAAATAAGCAGCATTAGCTCCTTCCGCAAGTCTTCACTGATGCTGATGGAGAGCAGTGAGGGCTaGGCCACTGGTACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: QLQISSISSFRKSSLMLMESSEG*ATGTFG
Trigger: GCCAAAGGTACCAGTGGCTCAGCCCTCACTGCTCTC...CATCAGCATCAGTGAAGACTTGCGGAAGGAGCTAATGCTGCTTATTTGCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
CDS-3UTR TCA 90 bp GATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCTGGCAGGCTTTCAGCTTGTTCTGCTaGGCTGTGCTCAGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: DGKMLQLVLLSCAQFWQAFSLFC*AVLSSG
Trigger: GCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAA...AGCCTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436564.5
ENST00000449784.5
CDS-3UTR TCA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGCCAGCTTGCCCTGGATaGTGTCAGTGTAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: LRYQRLVNPALSTNWRSEPACPG*CQCRQP
Trigger: AGGCTGTCTACACTGACATCATCCAGGGCAAGCTGG...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp CACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCAGCTTCTACCTGCTGCTaGGTTCGGTTGTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: HIFLNHPNPSPSRSTRYAASTCC*VRLWFS
Trigger: AGAGAACCACAACCGAACTCAGCAGCAGGTAGAAGC...TGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp ATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATTGTCCCCTCCCCACCTaGCCCAGGCCTGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: MQGLDNIIDILLSDVTANCPLPT*PRPGEC
Trigger: GCACTCACCAGGCCTGGGTCAGGTGGGGAGGGGACA...ATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR TCA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGAAGCTGGGCAGTGTCTaGCCCTGTTTTGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: LRYQRLVNPALSTNWRSEKLGSV*PCFGMA
Trigger: TGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTT...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGGGAGACCAGCCTGACAAAATaGCGTGGAGCAAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: DGIGGAPESEGNNWGRRETSLTK*RGAKEK
Trigger: TTTTTCTTTTGCTCCACGTCATTTTGTCAGGCTGGT...CTCCCTCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGACCAGCCTGACAAAATaGCGTGGAGCAAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQTSLTK*RGAKEK
Trigger: TTTTTCTTTTGCTCCACGTCATTTTGTCAGGCTGGT...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GCGGTGGCTTTGAGTGTCTTCTTGATGTTGGTAACCTCTGCTTCTACCTGCTGCGAAAGCAGCGCATCTTaGCGCCTGGCTAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: AVALSVFLMLVTSASTCCESSAS*RLARNH
Trigger: GTGATTTCTAGCCAGGCGTCAAGATGCGCTGCTTTC...GCAGCAGGTAGAAGCAGAGGTTACCAACATCAAGAAGACACTCAAAGCCACCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR TCA 90 bp ATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCAACCTCAGCCAAGGAGGGGTaGAAAGACAGAAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: IFLNHPNPSPSRSTRYATSAKEG*KDRSSN
Trigger: GTTGCTGCTTCTGTCTTTTCACCCCTCCTTGGCTGA...GGTTGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp ACACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGGCTAGTAAAATAAACTaGTCCAGGAGATTACTTGAG +
Preference number: 4 (lower is better)
Translates to: TQPSITSLHGLNWSCQQGASKIN*SRRLLE
Trigger: CTCAAGTAATCTCCTGGAGCAGTTTATTTTACTAGC...CCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACCCACCATCACACCATTCATaGAGGGTCTTGACAATATTA +
Preference number: 4 (lower is better)
Translates to: ARRERQAGRNHFCHPADPPSHHS*RVLTIL
Trigger: TAATATTGTCAAGACCCTGCATGAATGGTGTGATGG...TGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCATCACACCATTCATaGAGGGTCTTGACAATATTA +
Preference number: 4 (lower is better)
Translates to: RSFSRQRGIDATIPTQVQPSHHS*RVLTIL
Trigger: TAATATTGTCAAGACCCTGCATGAATGGTGTGATGG...CTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TTCACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGAACTTGCTGCTCGATaGCCAGTAGAACTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: FTIIPGGWLKLPPAYNQPELAAR*PVELLH
Trigger: GTGAAGCAGTTCTACTGGGCATCGAGCAGCAAGTTC...AGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGAACTTGCTGCTCGATaGCCAGTAGAACTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: ELKILGEQALAGSSSGQLELAAR*PVELLH
Trigger: GTGAAGCAGTTCTACTGGGCATCGAGCAGCAAGTTC...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGATGTTGGTAACCTCTaGTTCTACCTGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGDVGNL*FYLLLS
Trigger: ACTCAGCAGCAGGTAGAAGCAGAGGTTACCAACATC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000409295.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CAAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGGCCTGAACTGGAGCTaGCAACAAGGGATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QKKNWEGDKPLHRDKNLLGLNWS*QQGMRQ
Trigger: CTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCC...CAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATGGTCCTCTTAGTCGCTaGCTCGGCCTCCCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: MQGLDNIIDILLSDVTANGPLSR*LGLPAP
Trigger: AGGCGCCGGGAGGCCGAGCCAGCGACTAAGAGGACC...ATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp ATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCAACCGGAGCCTCTAAGACCTaGCTTATGAGAGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: IFLNHPNPSPSRSTRYATGASKT*LMRAVR
Trigger: CCTCACTGCTCTCATAAGCCAGGTCTTAGAGGCTCC...GGTTGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGCAGGCTCTCCTTGTTaGCTATGTAATCTGGGTATG +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGAGSPC*LCNLGM
Trigger: CATACCCAGATTACATAGCCAACAAGGAGAGCCTGC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
CDS-3UTR CCA 90 bp AGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTTGGTTCTCTTTGTACTaGTTGGCTCTCAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: RSSNRSFSRQRGIDATIPWFSLY*LALRTC
Trigger: GCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCA...AGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GAGTTCGGTTGTGGTTCTCTTTGTACTGGTTGGCTCTCAGAACTTGCTGCTCGATGGACATCTTCTTGGTaGGCTGCCTCTGCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: EFGCGSLCTGWLSELAARWTSSW*AASAQR
Trigger: ACGCTGAGCAGAGGCAGCCCACCAAGAAGATGTCCA...TCGAGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCACAACCGAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGCCAGACCTTTCACTTTaGACATCTTCTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRPDLSL*TSSWWA
Trigger: AGCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGG...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCAGACCTTTCACTTTaGACATCTTCTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LKILGEQALAGSSSGQLGPDLSL*TSSWWA
Trigger: AGCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGG...CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTTGGGACCAGACCTTTCACTTTaGACATCTTCTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SMPPSLPRCSQEELKILGPDLSL*TSSWWA
Trigger: AGCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGG...TCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CCCTTTTCCACAGAGCAGCTGACAGGGGGCTGCATGAAACATACTTTGGAAATTCTCCTGGAGGGAAGCTaGGCAGTGTCTGACCCTGTT +
Preference number: 4 (lower is better)
Translates to: PFSTEQLTGGCMKHTLEILLEGS*AVSDPV
Trigger: AACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAG...AATTTCCAAAGTATGTTTCATGCAGCCCCCTGTCAGCTGCTCTGTGGAAAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CAAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGCTCCACGGCCTGAACTaGAGCTGCCAACAAGGGATG +
Preference number: 4 (lower is better)
Translates to: QKKNWEGDKPLHRDKNLLLHGLN*SCQQGM
Trigger: CATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAG...CAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGTCTTTCAGCAACACGGAGTAGGGGATACACTTCATTCTTGATGCCAAGCTCAGTTCCAGTGGGCAGCTaGGGCCTACACACCGAAAAC +
Preference number: 4 (lower is better)
Translates to: GLSATRSRGYTSFLMPSSVPVGS*GLHTEN
Trigger: GTTTTCGGTGTGTAGGCCCCAGCTGCCCACTGGAAC...TGAGCTTGGCATCAAGAATGAAGTGTATCCCCTACTCCGTGTTGCTGAAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413197.5
CDS-3UTR CCA 90 bp CTCCACTTGGGCATAATGTTATGTGGGCACATGGATTGGCTTAAAAGGGAAACAAGCCGGCAGTTCCAGTaGGCAGCTGGGGCCTACACA +
Preference number: 4 (lower is better)
Translates to: LHLGIMLCGHMDWLKRETSRQFQ*AAGAYT
Trigger: TGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCT...TGTTTCCCTTTTAAGCCAATCCATGTGCCCACATAACATTATGCCCAAGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGATCATCAGAGGGCTCTaGGTCATCAGCCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LRYQRLVNPALSTNWRSEIIRGL*VISQGG
Trigger: CCCTCCTTGGCTGATGACCCAGAGCCCTCTGATGAT...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCAACCCACTGCGCGGCACACTaGAGTCTAAGTTACAGAGGA +
Preference number: 4 (lower is better)
Translates to: IFLNHPNPSPSRSTRYATHCAAH*SLSYRG
Trigger: TCCTCTGTAACTTAGACTCCAGTGTGCCGCGCAGTG...GGTTGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611614.4
CDS-3UTR TCA 90 bp CAAGCTCACGATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCCTCCAGGAGATTACTTaGGGGTTTCTGTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: QAHDGKMLQLVLLSCAQFLQEIT*GFLFPC
Trigger: GCAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAG...GAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATCGTGAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449784.5
CDS-3UTR TCA 90 bp GTATGTCCCATAGGCAAACAGGTTCAACAACTGCAAATAAGCAGCATTAGCTCCGAGAGCAGTGAGGGCTaGGCCACTGGTACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: VCPIGKQVQQLQISSISSESSEG*ATGTFG
Trigger: GCCAAAGGTACCAGTGGCTCAGCCCTCACTGCTCTC...GGAGCTAATGCTGCTTATTTGCAGTTGTTGAACCTGTTTGCCTATGGGACATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432387.5
ENST00000449784.5
CDS-3UTR TCA 90 bp AGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTGAGAGCAGTGAGGGCTaGGCCACTGGTACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: RKTKEPLFCLELLCCQLRESSEG*ATGTFG
Trigger: GCCAAAGGTACCAGTGGCTCAGCCCTCACTGCTCTC...ACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR TCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGATACACTTCATTCTTaGTGCCAAGCTCACGATGGT +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGDTLHS*CQAHDG
Trigger: ACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGATACACTTCATTCTTaGTGCCAAGCTCACGATGGT +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRDTLHS*CQAHDG
Trigger: ACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATC...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGGAAAGCAGCGCATCTTaGCGCCTGGCTAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: LRYQRLVNPALSTNWRSEESSAS*RLARNH
Trigger: GTGATTTCTAGCCAGGCGTCAAGATGCGCTGCTTTC...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AAACAGCATCACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCGAAAGCAGCGCATCTTaGCGCCTGGCTAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: KQHHIFLNHPNPSPSRSTESSAS*RLARNH
Trigger: GTGATTTCTAGCCAGGCGTCAAGATGCGCTGCTTTC...GGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTGATGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAATACTTCAACATTTaGTCAACAGTAGGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQEYFNI*STVGSC
Trigger: GCAACTGCCTACTGTTGATCAAATGTTGAAGTATTC...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp CTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTTGTTGTCAGCGGGCGGGTTTGTaGATTTGCGCACACTGCGCG +
Preference number: 4 (lower is better)
Translates to: LPGTSLLSITLTGCCCCCQRAGL*ICAHCA
Trigger: CGCGCAGTGTGCGCAAATTCACAAACCCGCCCGCTG...ACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449784.5
ENST00000452375.5
CDS-3UTR GCA 90 bp TTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGCTAGTAAAATAAACTaGTCCAGGAGATTACTTGAG +
Preference number: 4 (lower is better)
Translates to: FSRQRGIDATIPTQVQPGASKIN*SRRLLE
Trigger: CTCAAGTAATCTCCTGGAGCAGTTTATTTTACTAGC...TCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GTATGTCCCATAGGCAAACAGGTTCAACAACTGCAAATAAGCAGCATTAGCTCCCCCCGTCTCTACTCCTaGACGTTGGCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VCPIGKQVQQLQISSISSPRLYS*TLASSR
Trigger: TCTGGAGCTGGCCAACGTGCAGGAGTAGAGACGGGG...GGAGCTAATGCTGCTTATTTGCAGTTGTTGAACCTGTTTGCCTATGGGACATAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000449784.5
CDS-3UTR GCA 90 bp CAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTCCATCACACCATTCATaGAGGGTCTTGACAATATTA +
Preference number: 4 (lower is better)
Translates to: QQVLQQTEGHRCHHPYPGPSHHS*RVLTIL
Trigger: TAATATTGTCAAGACCCTGCATGAATGGTGTGATGG...ACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GCGGTGGCTTTGAGTGTCTTCTTGATGTTGGTAACCTCTGCTTCTACCTGCTGCGCTCTCAGAACTTGCTaGTCGATGCCCAGTAGAACT +
Preference number: 4 (lower is better)
Translates to: AVALSVFLMLVTSASTCCALRTC*SMPSRT
Trigger: AGTTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGC...GCAGCAGGTAGAAGCAGAGGTTACCAACATCAAGAAGACACTCAAAGCCACCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR GCA 90 bp CTGGTCCAGCTTGCCCTGGATGATGTCAGTGTAGACAGCCTCAATGATAAGGTCAAGATCCACCAGGTATaGAACCCCAAACCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LVQLALDDVSVDSLNDKVKIHQV*NPKPQS
Trigger: TGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTT...GACCTTATCATTGAGGCTGTCTACACTGACATCATCCAGGGCAAGCTGGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413197.5
CDS-3UTR GCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGTCCGCAAGCATGATTTaGAGATGTCTGAGTTCCATG +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGSASMI*RCLSSM
Trigger: CATGGAACTCAGACATCTGCAAATCATGCTTGCGGA...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409295.5
CDS-3UTR CCA 90 bp AGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGAGCAGCTGGTTTCGCTaGTCCAGCTTGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: SHCSAWNFSAVNYVNWLLSSWFR*SSLPWM
Trigger: CATCCAGGGCAAGCTGGACCAGCGAAACCAGCTGCT...CAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449784.5
CDS-3UTR CCA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACTCTCTTTGTACTGGTTaGCTCTCAGAACTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDSLCTG*LSELAA
Trigger: AGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGA...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGTCTCTTTGTACTGGTTaGCTCTCAGAACTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGSLCTG*LSELAA
Trigger: AGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGA...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGTGGTTCTCTTTGTACTaGTTGGCTCTCAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRWFSLY*LALRTC
Trigger: GCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCA...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCACGTGGTTCTCTTTGTACTaGTTGGCTCTCAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: RLKTRGFSKHSPASRPSTWFSLY*LALRTC
Trigger: GCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCA...CGTGGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CCTCAAGATCCACCAGGTATGCAACCCCAAACCCCAGTCACATACATTAAATCTGGCCCTAGTGGCGGCTaGAGACCAGACCTTTCACTT +
Preference number: 4 (lower is better)
Translates to: PQDPPGMQPQTPVTYIKSGPSGG*RPDLSL
Trigger: AAGTGAAAGGTCTGGTCTCCAGCCGCCACTAGGGCC...AGATTTAATGTATGTGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CAAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGTCTGAAGGGAACAACTaGGGAAGGAGGGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QKKNWEGDKPLHRDKNLLSEGNN*GRREWV
Trigger: CACCCACTCCCTCCTTCCCCAGTTGTTCCCTTCAGA...CAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CCCTTTTCCACAGAGCAGCTGACAGGGGGCTGCATGAAACATACTTTGGAAATTGAGACAAGAACCTCCTaGAGGGAAGCTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: PFSTEQLTGGCMKHTLEIETRTS*REAGQC
Trigger: ACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTC...AATTTCCAAAGTATGTTTCATGCAGCCCCCTGTCAGCTGCTCTGTGGAAAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGGAGACAAGAACCTCCTaGAGGGAAGCTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: KRKTGRETSPYTETRTSWETRTS*REAGQC
Trigger: ACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTC...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CAAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGAGACAAGAACCTCCTaGAGGGAAGCTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: QKKNWEGDKPLHRDKNLLETRTS*REAGQC
Trigger: ACACTGCCCAGCTTCCCTCCAGGAGGTTCTTGTCTC...CAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AAACAGCATCACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCCTTCACAATCATCCCTaGGGGCTGGTTAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KQHHIFLNHPNPSPSRSTLHNHP*GLVKAA
Trigger: GGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAAG...GGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTGATGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGTTGGCTCCTGCACGTTaGCCAGCTCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: KRKTGRETSPYTETRTSWLAPAR*PAPEVL
Trigger: GAGAACTTCTGGAGCTGGCCAACGTGCAGGAGCCAA...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CCA 90 bp ACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATATACACTATGTAATCTaGGTATGTCCCATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: TAQHHVPPRPELELPTRDIHYVI*VCPIGK
Trigger: TTTGCCTATGGGACATACCCAGATTACATAGTGTAT...ATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412922.6
CDS-3UTR TCA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGCTCCAGGAGATTACTTaGGGGTTTCTGTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KRKTGRETSPYTETRTSWLQEIT*GFLFPC
Trigger: GCAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAG...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTTGTTGTTGGAGAGCAGTGAGGGCTaGGCCACTGGTACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: AWNFSAVNYVNWLLLLLLESSEG*ATGTFG
Trigger: GCCAAAGGTACCAGTGGCTCAGCCCTCACTGCTCTC...CAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR TCA 90 bp ACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTGAGAGCAGTGAGGGCTaGGCCACTGGTACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: TVLPGTSLLSITLTGCCCESSEG*ATGTFG
Trigger: GCCAAAGGTACCAGTGGCTCAGCCCTCACTGCTCTC...ACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR TCA 90 bp CAAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGTTCAGCTTGTTCTGCTaGGCTGTGCTCAGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QKKNWEGDKPLHRDKNLLFSLFC*AVLSSG
Trigger: GCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAA...CAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp TTCACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGATACACTTCATTCTTaGTGCCAAGCTCACGATGGT +
Preference number: 4 (lower is better)
Translates to: FTIIPGGWLKLPPAYNQPDTLHS*CQAHDG
Trigger: ACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATC...AGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR TCA 90 bp AAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGCCAGCTTGCCCTGGATaGTGTCAGTGTAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: KSHCSAWNFSAVNYVNWLPACPG*CQCRQP
Trigger: AGGCTGTCTACACTGACATCATCCAGGGCAAGCTGG...CAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449784.5
CDS-3UTR TCA 90 bp GGGATGCAGGGAGTGCAACATTTATTTCATAACAGAACCCCTTTTCCACAGAGCAAGCTGGGCAGTGTCTaGCCCTGTTTTGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: GMQGVQHLFHNRTPFPQSKLGSV*PCFGMA
Trigger: TGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTT...GCTCTGTGGAAAAGGGGTTCTGTTATGAAATAAATGTTGCACTCCCTGCATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGACCAGCCTGACAAAATaGCGTGGAGCAAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRTSLTK*RGAKEK
Trigger: TTTTTCTTTTGCTCCACGTCATTTTGTCAGGCTGGT...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGTCAGCCAAGGAGGGGTaGAAAGACAGAAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: KRKTGRETSPYTETRTSWSAKEG*KDRSSN
Trigger: GTTGCTGCTTCTGTCTTTTCACCCCTCCTTGGCTGA...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTGAATACTTCAACATTTaGTCAACAGTAGGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: RSSNRSFSRQRGIDATIPEYFNI*STVGSC
Trigger: GCAACTGCCTACTGTTGATCAAATGTTGAAGTATTC...AGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp ATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATCAGCGGGCGGGTTTGTaGATTTGCGCACACTGCGCG +
Preference number: 4 (lower is better)
Translates to: MQGLDNIIDILLSDVTANQRAGL*ICAHCA
Trigger: CGCGCAGTGTGCGCAAATTCACAAACCCGCCCGCTG...ATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449784.5
CDS-3UTR GCA 90 bp GAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTGGAGCCCCTGAGGCTAGTAAAATAAACTaGTCCAGGAGATTACTTGAG +
Preference number: 4 (lower is better)
Translates to: EAGQCLTLFWDGIGGAPEASKIN*SRRLLE
Trigger: CTCAAGTAATCTCCTGGAGCAGTTTATTTTACTAGC...CTCAGGGGCTCCACCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp ACTGATGCTGATGGCAAAAAGCCATGTGTAGAAGAAAAACGAAAGAGCCACTGTCCCCGTCTCTACTCCTaGACGTTGGCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TDADGKKPCVEEKRKSHCPRLYS*TLASSR
Trigger: TCTGGAGCTGGCCAACGTGCAGGAGTAGAGACGGGG...ACAGTGGCTCTTTCGTTTTTCTTCTACACATGGCTTTTTGCCATCAGCATCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357490.6
ENST00000449784.5
CDS-3UTR GCA 90 bp AAACAGCATCACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCGAACTTGCTGCTCGATaGCCAGTAGAACTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: KQHHIFLNHPNPSPSRSTELAAR*PVELLH
Trigger: GTGAAGCAGTTCTACTGGGCATCGAGCAGCAAGTTC...GGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTGATGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGCTGGCTAGAAATCACTaGACCATCGTGAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: LRYQRLVNPALSTNWRSELARNH*TIVRTV
Trigger: CACAGTCCTCACGATGGTGCAGTGATTTCTAGCCAG...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CCTCAAGATCCACCAGGTATGCAACCCCAAACCCCAGTCACATACATTAAATCTGGAAGGAACCATTTCTaGCACCCAGCAGACCCACAG +
Preference number: 4 (lower is better)
Translates to: PQDPPGMQPQTPVTYIKSGRNHF*HPADPQ
Trigger: CTGTGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCC...AGATTTAATGTATGTGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CAAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGCTCTTGCCAGGAGAATaGCATCATCAGAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QKKNWEGDKPLHRDKNLLLLPGE*HHQRAL
Trigger: CAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAG...CAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCACAGCTGACAGGGGGCTaGATGAAACATACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: HIFLNHPNPSPSRSTRYAQLTGG*MKHTLE
Trigger: TTCCAAAGTATGTTTCATGCAGCCCCCTGTCAGCTG...TGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGCAGAAGTTAACTCTCTaGGGGCTGTCATCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGQKLTL*GLSSSF
Trigger: AAAAGAAGATGACAGCCCGCAGAGAGTTAACTTCTG...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409295.5
ENST00000611614.4
CDS-3UTR GCA 90 bp GATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCTGGCAGGCTTACAGGTGGGTATTCTaGACTTCACAGCACTCCAAG +
Preference number: 4 (lower is better)
Translates to: DGKMLQLVLLSCAQFWQAYRWVF*TSQHSK
Trigger: CTTGGAGTGCTGTGAAGTGCAGAATACCCACCTGTA...AGCCTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436564.5
CDS-3UTR CCA 90 bp CGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGGGAGCCTCTAAGACCTaGCTTATGAGAGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: RKSHCSAWNFSAVNYVNWGASKT*LMRAVR
Trigger: CCTCACTGCTCTCATAAGCCAGGTCTTAGAGGCTCC...CCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CCA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACGTTGGCTATGTAATCTaGGTATGTCCCATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDVGYVI*VCPIGK
Trigger: TTTGCCTATGGGACATACCCAGATTACATAGCCAAC...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
CDS-3UTR CCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGTTGGCTATGTAATCTaGGTATGTCCCATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGVGYVI*VCPIGK
Trigger: TTTGCCTATGGGACATACCCAGATTACATAGCCAAC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
CDS-3UTR CCA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGTCTCTTTGTACTGGTTaGCTCTCAGAACTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ELKILGEQALAGSSSGQLSLCTG*LSELAA
Trigger: AGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGA...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TTAAGTCTTTTTCTCTTGCCAGGAGAATGCCATCATCAGAGGGCTCTGGGTCATTCTGAAGGGAACAACTaGGGAAGGAGGGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LSLFLLPGECHHQRALGHSEGNN*GRREWV
Trigger: CACCCACTCCCTCCTTCCCCAGTTGTTCCCTTCAGA...ATGACCCAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TGTGTAGAAGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCCTCCAGGAGATTACTTaGGGGTTTCTGTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: CVEEKRKSHCSAWNFSAVLQEIT*GFLFPC
Trigger: GCAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAG...GACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCTTCTACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR TCA 90 bp GGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATGCAGAAGAGAGCAGTGAGGGCTaGGCCACTGGTACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GLDNIIDILLSDVTANAEESSEG*ATGTFG
Trigger: GCCAAAGGTACCAGTGGCTCAGCCCTCACTGCTCTC...TTCTGCATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412922.6
ENST00000413197.5
ENST00000449784.5
CDS-3UTR TCA 90 bp CTCCACTTGGGCATAATGTTATGTGGGCACATGGATTGGCTTAAAAGGGAAACACCAGCTTGCCCTGGATaGTGTCAGTGTAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: LHLGIMLCGHMDWLKRETPACPG*CQCRQP
Trigger: AGGCTGTCTACACTGACATCATCCAGGGCAAGCTGG...TGTTTCCCTTTTAAGCCAATCCATGTGCCCACATAACATTATGCCCAAGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp CCTCAAGATCCACCAGGTATGCAACCCCAAACCCCAGTCACATACATTAAATCTGCTTCTACCTGCTGCTaGGTTCGGTTGTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: PQDPPGMQPQTPVTYIKSASTCC*VRLWFS
Trigger: AGAGAACCACAACCGAACTCAGCAGCAGGTAGAAGC...AGATTTAATGTATGTGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGTGCTTTTTCCTCAATaGACTTTAATCAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGVLFPQ*TLISPG
Trigger: TCCTGGACTGATTAAAGTTCATTGAGGAAAAAGCAC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp TTTGGGATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGAATACTTCAACATTTaGTCAACAGTAGGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: FGMALVEPLSLKGTTGEGEYFNI*STVGSC
Trigger: GCAACTGCCTACTGTTGATCAAATGTTGAAGTATTC...TCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGAATACTTCAACATTTaGTCAACAGTAGGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: GVTVFLEQYQQGGEALVREYFNI*STVGSC
Trigger: GCAACTGCCTACTGTTGATCAAATGTTGAAGTATTC...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGGGATGTCACGGCCAATaGAGAAATCCACTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RKSHCSAWNFSAVNYVNWGCHGQ*RNPLPA
Trigger: TGCTGGAAGTGGATTTCTGCATTGGCCGTGACATCC...CCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449784.5
CDS-3UTR GCA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGCCATCACACCATTCATaGAGGGTCTTGACAATATTA +
Preference number: 4 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGPSHHS*RVLTIL
Trigger: TAATATTGTCAAGACCCTGCATGAATGGTGTGATGG...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACCCATCACACCATTCATaGAGGGTCTTGACAATATTA +
Preference number: 4 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDPSHHS*RVLTIL
Trigger: TAATATTGTCAAGACCCTGCATGAATGGTGTGATGG...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GAGTTCGGTTGTGGTTCTCTTTGTACTGGTTGGCTCTCAGAACTTGCTGCTCGAGATGTTGGTAACCTCTaGTTCTACCTGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: EFGCGSLCTGWLSELAARDVGNL*FYLLLS
Trigger: ACTCAGCAGCAGGTAGAAGCAGAGGTTACCAACATC...TCGAGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCACAACCGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR GCA 90 bp GTCTTCACTGATGCTGATGGCAAAAAGCCATGTGTAGAAGAAAAACGAAAGAGCTCGAGACCATCCTCCTaGACGTTGGCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VFTDADGKKPCVEEKRKSSRPSS*TLASSR
Trigger: TCTGGAGCTGGCCAACGTGCAGGAGGATGGTCTCGA...GCTCTTTCGTTTTTCTTCTACACATGGCTTTTTGCCATCAGCATCAGTGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450501.5
CDS-3UTR GCA 90 bp ACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTAAACCCCGTCTCTCCTaGACGTTGGCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TVLPGTSLLSITLTGCCCKPRLS*TLASSR
Trigger: TCTGGAGCTGGCCAACGTGCAGGAGAGACGGGGTTT...ACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452375.5
CDS-3UTR CCA 90 bp CCATGTGTAGAAGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGGAGCCTCTAAGACCTaGCTTATGAGAGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: PCVEEKRKSHCSAWNFSAGASKT*LMRAVR
Trigger: CCTCACTGCTCTCATAAGCCAGGTCTTAGAGGCTCC...AGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCTTCTACACATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CCA 90 bp AATGTTGAAACATTCTACAGGTGGGTATTCTGCACTTCACAGCACTCCAAGAGCCAAGCTCCTGCACGTTaGCCAGCTCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: NVETFYRWVFCTSQHSKSQAPAR*PAPEVL
Trigger: GAGAACTTCTGGAGCTGGCCAACGTGCAGGAGCTTG...GCTCTTGGAGTGCTGTGAAGTGCAGAATACCCACCTGTAGAATGTTTCAACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436564.5
CDS-3UTR CCA 90 bp TCATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAAGCAGCTGGTTTCGCTaGTCCAGCTTGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: SCRVLTILLISFFRMSRPSSWFR*SSLPWM
Trigger: CATCCAGGGCAAGCTGGACCAGCGAAACCAGCTGCT...TGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412922.6
ENST00000413197.5
ENST00000449784.5
CDS-3UTR CCA 90 bp TCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTTGGGATGTTATGTGGGCACATaGATTGGCTTAAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SMPPSLPRCSQEELKILGCYVGT*IGLKGK
Trigger: TTTCCCTTTTAAGCCAATCCATGTGCCCACATAACA...TCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATTGTTATGTGGGCACATaGATTGGCTTAAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHCYVGT*IGLKGK
Trigger: TTTCCCTTTTAAGCCAATCCATGTGCCCACATAACA...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp ACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCTGTTATGTGGGCACATaGATTGGCTTAAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: TAPSVCAQIPEVSQPSALCYVGT*IGLKGK
Trigger: TTTCCCTTTTAAGCCAATCCATGTGCCCACATAACA...GAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGGAAGGGTCTTCCCGTTaGGTTTCAAGTCTCGGGATT +
Preference number: 4 (lower is better)
Translates to: RKSHCSAWNFSAVNYVNWEGSSR*VSSLGI
Trigger: AATCCCGAGACTTGAAACCCAACGGGAAGACCCTTC...CCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449784.5
ENST00000452375.5
CDS-3UTR CCA 90 bp ACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTCTGGCTCCTGCACGTTaGCCAGCTCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: TVLPGTSLLSITLTGCCCLAPAR*PAPEVL
Trigger: GAGAACTTCTGGAGCTGGCCAACGTGCAGGAGCCAG...ACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432387.5
CDS-3UTR CCA 90 bp AAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACCATCCTCCTGCACGTTaGCCAGCTCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: KRKSHCSAWNFSAVNYVNHPPAR*PAPEVL
Trigger: GAGAACTTCTGGAGCTGGCCAACGTGCAGGAGGATG...GTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450501.5
CDS-3UTR CCA 90 bp GAAGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTCTCTCCTGCACGTTaGCCAGCTCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: EEKRKSHCSAWNFSAVNYVSPAR*PAPEVL
Trigger: GAGAACTTCTGGAGCTGGCCAACGTGCAGGAGAGAC...GTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452375.5
CDS-3UTR TCA 90 bp AAGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGCTCCAGGAGATTACTTaGGGGTTTCTGTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KKNERATVLPGTSLLSITLQEIT*GFLFPC
Trigger: GCAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAG...CGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR TCA 90 bp GTATGTCCCATAGGCAAACAGGTTCAACAACTGCAAATAAGCAGCATTAGCTCCTTCAGCTTGTTCTGCTaGGCTGTGCTCAGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: VCPIGKQVQQLQISSISSFSLFC*AVLSSG
Trigger: GCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAA...GGAGCTAATGCTGCTTATTTGCAGTTGTTGAACCTGTTTGCCTATGGGACATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449784.5
CDS-3UTR TCA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGTGCTTTTTCCTCAATaGACTTTAATCAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ELKILGEQALAGSSSGQLVLFPQ*TLISPG
Trigger: TCCTGGACTGATTAAAGTTCATTGAGGAAAAAGCAC...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TTAAGTCTTTTTCTCTTGCCAGGAGAATGCCATCATCAGAGGGCTCTGGGTCATGAACTTGCTGCTCGATaGCCAGTAGAACTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LSLFLLPGECHHQRALGHELAAR*PVELLH
Trigger: GTGAAGCAGTTCTACTGGGCATCGAGCAGCAAGTTC...ATGACCCAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp TTAAGTCTTTTTCTCTTGCCAGGAGAATGCCATCATCAGAGGGCTCTGGGTCATGCTCTCAGAACTTGCTaGTCGATGCCCAGTAGAACT +
Preference number: 4 (lower is better)
Translates to: LSLFLLPGECHHQRALGHALRTC*SMPSRT
Trigger: AGTTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGC...ATGACCCAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGCAGCTGACAGGGGGCTaGATGAAACATACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: KRKTGRETSPYTETRTSWQLTGG*MKHTLE
Trigger: TTCCAAAGTATGTTTCATGCAGCCCCCTGTCAGCTG...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp AAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACGGAGCCTCTAAGACCTaGCTTATGAGAGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: KRKSHCSAWNFSAVNYVNGASKT*LMRAVR
Trigger: CCTCACTGCTCTCATAAGCCAGGTCTTAGAGGCTCC...GTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CCA 90 bp AGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTCTACTCCTGCACGTTaGCCAGCTCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: RKTKEPLFCLELLCCQLRSTPAR*PAPEVL
Trigger: GAGAACTTCTGGAGCTGGCCAACGTGCAGGAGTAGA...ACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357490.6
ENST00000449784.5
CDS-3UTR CCA 90 bp CACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCAGTTGGCTATGTAATCTaGGTATGTCCCATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: HIFLNHPNPSPSRSTRYAVGYVI*VCPIGK
Trigger: TTTGCCTATGGGACATACCCAGATTACATAGCCAAC...TGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350033.8
ENST00000373608.7
CDS-3UTR CCA 90 bp GCTTTTTCCTCAATGAACTTTAATCAGTCCAGGACCTACAAACACACACACACAAGCAGCTGGTTTCGCTaGTCCAGCTTGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: AFSSMNFNQSRTYKHTHTSSWFR*SSLPWM
Trigger: CATCCAGGGCAAGCTGGACCAGCGAAACCAGCTGCT...TGTGTGTGTGTGTTTGTAGGTCCTGGACTGATTAAAGTTCATTGAGGAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CTGCTGAGTTCGGTTGTGGTTCTCTTTGTACTGGTTGGCTCTCAGAACTTGCTGTGGTTCTCTTTGTACTaGTTGGCTCTCAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: LLSSVVVLFVLVGSQNLLWFSLY*LALRTC
Trigger: GCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCA...CAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCACAACCGAACTCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp CCCTTTTCCACAGAGCAGCTGACAGGGGGCTGCATGAAACATACTTTGGAAATTCCAGACCTTTCACTTTaGACATCTTCTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PFSTEQLTGGCMKHTLEIPDLSL*TSSWWA
Trigger: AGCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGG...AATTTCCAAAGTATGTTTCATGCAGCCCCCTGTCAGCTGCTCTGTGGAAAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp TATGTAATCTGGGTATGTCCCATAGGCAAACAGGTTCAACAACTGCAAATAAGCAGATCGAGACCATCCTaGCTCCTGCACGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: YVIWVCPIGKQVQQLQISRSRPS*LLHVGQ
Trigger: CTGGCCAACGTGCAGGAGCCAGGATGGTCTCGATCT...GCTTATTTGCAGTTGTTGAACCTGTTTGCCTATGGGACATACCCAGATTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432387.5
CDS-3UTR TCA 90 bp TTCATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCGCTTCTACCTGCTGCTaGGTTCGGTTGTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: FMQGLDNIIDILLSDVTAASTCC*VRLWFS
Trigger: AGAGAACCACAACCGAACTCAGCAGCAGGTAGAAGC...GGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR TCA 90 bp ACTTTGGAAATTAAAGTGAACTCTCCACTTGGGCATAATGTTATGTGGGCACATATCACTGCACCATCGTaGGGACTGTGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: TLEIKVNSPLGHNVMWAHITAPS*GLWYQG
Trigger: CCCCTGGTACCACAGTCCTCACGATGGTGCAGTGAT...ATGTGCCCACATAACATTATGCCCAAGTGGAGAGTTCACTTTAATTTCCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp CTGGTCCAGCTTGCCCTGGATGATGTCAGTGTAGACAGCCTCAATGATAAGGTCGAATACTTCAACATTTaGTCAACAGTAGGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: LVQLALDDVSVDSLNDKVEYFNI*STVGSC
Trigger: GCAACTGCCTACTGTTGATCAAATGTTGAAGTATTC...GACCTTATCATTGAGGCTGTCTACACTGACATCATCCAGGGCAAGCTGGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413197.5
CDS-3UTR GCA 90 bp CCTCAAGATCCACCAGGTATGCAACCCCAAACCCCAGTCACATACATTAAATCTCAGCTGACAGGGGGCTaGATGAAACATACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: PQDPPGMQPQTPVTYIKSQLTGG*MKHTLE
Trigger: TTCCAAAGTATGTTTCATGCAGCCCCCTGTCAGCTG...AGATTTAATGTATGTGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGAAAACAAGCAATCTCTaGTTCTACCTGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LRYQRLVNPALSTNWRSEKTSNL*FYLLLS
Trigger: ACTCAGCAGCAGGTAGAAGCAGAGATTGCTTGTTTT...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410017.5
CDS-3UTR CCA 90 bp AAACAGGTTCAACAACTGCAAATAAGCAGCATTAGCTCCTTCCGCAAGTCTTCAGGAGCCTCTAAGACCTaGCTTATGAGAGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: KQVQQLQISSISSFRKSSGASKT*LMRAVR
Trigger: CCTCACTGCTCTCATAAGCCAGGTCTTAGAGGCTCC...TGAAGACTTGCGGAAGGAGCTAATGCTGCTTATTTGCAGTTGTTGAACCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
CDS-3UTR CCA 90 bp CTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTTGTTGTGGAGCCTCTAAGACCTaGCTTATGAGAGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LPGTSLLSITLTGCCCCCGASKT*LMRAVR
Trigger: CCTCACTGCTCTCATAAGCCAGGTCTTAGAGGCTCC...ACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CCA 90 bp GATGCTGATGGCAAAAAGCCATGTGTAGAAGAAAAACGAAAGAGCCACTGTTCTTCTACTCCTGCACGTTaGCCAGCTCCAGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: DADGKKPCVEEKRKSHCSSTPAR*PAPEVL
Trigger: GAGAACTTCTGGAGCTGGCCAACGTGCAGGAGTAGA...AGAACAGTGGCTCTTTCGTTTTTCTTCTACACATGGCTTTTTGCCATCAGCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357490.6
ENST00000449784.5
CDS-3UTR CCA 90 bp ATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATTCCACTTCCAGCAGCTaGTTTCGCTGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: MQGLDNIIDILLSDVTANSTSSS*FRWSSL
Trigger: CAAGCTGGACCAGCGAAACCAGCTGCTGGAAGTGGA...ATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412922.6
ENST00000413197.5
ENST00000449784.5
CDS-3UTR CCA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGTCTCTTTGTACTGGTTaGCTCTCAGAACTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KRKTGRETSPYTETRTSWSLCTG*LSELAA
Trigger: AGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGA...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CAAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGTGGTTCTCTTTGTACTaGTTGGCTCTCAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: QKKNWEGDKPLHRDKNLLWFSLY*LALRTC
Trigger: GCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCA...CAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GCTTTTTCCTCAATGAACTTTAATCAGTCCAGGACCTACAAACACACACACACATCTGAAGGGAACAACTaGGGAAGGAGGGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: AFSSMNFNQSRTYKHTHTSEGNN*GRREWV
Trigger: CACCCACTCCCTCCTTCCCCAGTTGTTCCCTTCAGA...TGTGTGTGTGTGTTTGTAGGTCCTGGACTGATTAAAGTTCATTGAGGAAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp GGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATGCAGAATCTGAAGGGAACAACTaGGGAAGGAGGGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GLDNIIDILLSDVTANAESEGNN*GRREWV
Trigger: CACCCACTCCCTCCTTCCCCAGTTGTTCCCTTCAGA...TTCTGCATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp GATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCTGGCAGGCTCTCATCTATGTAATCTaGGTATGTCCCATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: DGKMLQLVLLSCAQFWQALIYVI*VCPIGK
Trigger: TTTGCCTATGGGACATACCCAGATTACATAGATGAG...AGCCTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436564.5
CDS-3UTR GCA 90 bp ATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCAACCGCTAGTAAAATAAACTaGTCCAGGAGATTACTTGAG +
Preference number: 4 (lower is better)
Translates to: IFLNHPNPSPSRSTRYATASKIN*SRRLLE
Trigger: CTCAAGTAATCTCCTGGAGCAGTTTATTTTACTAGC...GGTTGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GTAGAAGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATAAAGAGCCACTGTTCTaGCTGGAACTTCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VEEKRKSHCSAWNFSAVNKEPLF*LELLCC
Trigger: ACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTT...ATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCTTCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR GCA 90 bp CTCCACTTGGGCATAATGTTATGTGGGCACATGGATTGGCTTAAAAGGGAAACAGATGTTGGTAACCTCTaGTTCTACCTGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LHLGIMLCGHMDWLKRETDVGNL*FYLLLS
Trigger: ACTCAGCAGCAGGTAGAAGCAGAGGTTACCAACATC...TGTTTCCCTTTTAAGCCAATCCATGTGCCCACATAACATTATGCCCAAGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp ACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTTGTTGTTGTTGTTTAGACCATCCTGGCTCCTaGACGTTGGCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TSLLSITLTGCCCCCCCLDHPGS*TLASSR
Trigger: TCTGGAGCTGGCCAACGTGCAGGAGCCAGGATGGTC...TAAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432387.5
CDS-3UTR CCA 90 bp ATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATGGAGCCTCTAAGACCTaGCTTATGAGAGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: MQGLDNIIDILLSDVTANGASKT*LMRAVR
Trigger: CCTCACTGCTCTCATAAGCCAGGTCTTAGAGGCTCC...ATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412922.6
ENST00000413197.5
ENST00000449784.5
CDS-3UTR CCA 90 bp GGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATGCAGAACTTCACAATCATCCCTaGGGGCTGGTTAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLDNIIDILLSDVTANAELHNHP*GLVKAA
Trigger: GGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAAG...TTCTGCATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp GCTTTTTCCTCAATGAACTTTAATCAGTCCAGGACCTACAAACACACACACACACTTCACAATCATCCCTaGGGGCTGGTTAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: AFSSMNFNQSRTYKHTHTLHNHP*GLVKAA
Trigger: GGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAAG...TGTGTGTGTGTGTTTGTAGGTCCTGGACTGATTAAAGTTCATTGAGGAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CCA 90 bp CAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATGCAGAAGGGTCTTCCCGTTaGGTTTCAAGTCTCGGGATT +
Preference number: 4 (lower is better)
Translates to: QGLDNIIDILLSDVTANAEGSSR*VSSLGI
Trigger: AATCCCGAGACTTGAAACCCAACGGGAAGACCCTTC...TGCATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449784.5
3UTR CAA 72 bp GCTGTCAATTACGTTAACTGGTTGTTGTTGTTGTTGTaGTTGTTTAAATCACAAACGTGGGCCGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: AVNYVNWLLLLL*LFKSQTWAGRG
Trigger: ACCGCGCCCGGCCCACGTTTGTGATTTAAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR TCA 90 bp AATGTTGAAACATTCTACAGGTGGGTATTCTGCACTTCACAGCACTCCAAGAGCGATACACTTCATTCTTaGTGCCAAGCTCACGATGGT +
Preference number: 4 (lower is better)
Translates to: NVETFYRWVFCTSQHSKSDTLHS*CQAHDG
Trigger: ACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATC...GCTCTTGGAGTGCTGTGAAGTGCAGAATACCCACCTGTAGAATGTTTCAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436564.5
CDS-3UTR TCA 90 bp CCCTTTTCCACAGAGCAGCTGACAGGGGGCTGCATGAAACATACTTTGGAAATTGTGCTTTTTCCTCAATaGACTTTAATCAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PFSTEQLTGGCMKHTLEIVLFPQ*TLISPG
Trigger: TCCTGGACTGATTAAAGTTCATTGAGGAAAAAGCAC...AATTTCCAAAGTATGTTTCATGCAGCCCCCTGTCAGCTGCTCTGTGGAAAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR TCA 90 bp GGTCTTTCAGCAACACGGAGTAGGGGATACACTTCATTCTTGATGCCAAGCTCAGTGCTTTTTCCTCAATaGACTTTAATCAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GLSATRSRGYTSFLMPSSVLFPQ*TLISPG
Trigger: TCCTGGACTGATTAAAGTTCATTGAGGAAAAAGCAC...TGAGCTTGGCATCAAGAATGAAGTGTATCCCCTACTCCGTGTTGCTGAAAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413197.5
CDS-3UTR TCA 90 bp CACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGGCCATTCTCTGGCCTTaGAATCATGATTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: HCSAWNFSAVNYVNWLLLAILWP*NHDLQM
Trigger: CATCTGCAAATCATGATTTCAAGGCCAGAGAATGGC...CAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449784.5
ENST00000452375.5
CDS-3UTR GCA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGGCTAGTAAAATAAACTaGTCCAGGAGATTACTTGAG +
Preference number: 4 (lower is better)
Translates to: LRYQRLVNPALSTNWRSEASKIN*SRRLLE
Trigger: CTCAAGTAATCTCCTGGAGCAGTTTATTTTACTAGC...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp GATGCTGATGGCAAAAAGCCATGTGTAGAAGAAAAACGAAAGAGCCACTGTTCTAAAGAGCCACTGTTCTaGCTGGAACTTCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DADGKKPCVEEKRKSHCSKEPLF*LELLCC
Trigger: ACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTT...AGAACAGTGGCTCTTTCGTTTTTCTTCTACACATGGCTTTTTGCCATCAGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR GCA 90 bp ACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTAAAGAGCCACTGTTCTaGCTGGAACTTCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TVLPGTSLLSITLTGCCCKEPLF*LELLCC
Trigger: ACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTT...ACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR GCA 90 bp GGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATGCAGAAGAACTTGCTGCTCGATaGCCAGTAGAACTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GLDNIIDILLSDVTANAEELAAR*PVELLH
Trigger: GTGAAGCAGTTCTACTGGGCATCGAGCAGCAAGTTC...TTCTGCATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR GCA 90 bp ATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATTTGGCTCTCAGAACTTaGTGCTCGATGCCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: MQGLDNIIDILLSDVTANLALRT*CSMPSR
Trigger: TCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAA...ATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR GCA 90 bp GGGATGCAGGGAGTGCAACATTTATTTCATAACAGAACCCCTTTTCCACAGAGCCAGAAGTTAACTCTCTaGGGGCTGTCATCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: GMQGVQHLFHNRTPFPQSQKLTL*GLSSSF
Trigger: AAAAGAAGATGACAGCCCGCAGAGAGTTAACTTCTG...GCTCTGTGGAAAAGGGGTTCTGTTATGAAATAAATGTTGCACTCCCTGCATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611614.4
CDS-3UTR CCA 90 bp GCTGATGGCAAAAAGCCATGTGTAGAAGAAAAACGAAAGAGCCACTGTTCTGCCGTTGGCTATGTAATCTaGGTATGTCCCATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: ADGKKPCVEEKRKSHCSAVGYVI*VCPIGK
Trigger: TTTGCCTATGGGACATACCCAGATTACATAGCCAAC...GGCAGAACAGTGGCTCTTTCGTTTTTCTTCTACACATGGCTTTTTGCCATCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000449784.5
CDS-3UTR CCA 90 bp TTCATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCGCAGGCTCTCCTTGTTaGCTATGTAATCTGGGTATG +
Preference number: 4 (lower is better)
Translates to: FMQGLDNIIDILLSDVTAAGSPC*LCNLGM
Trigger: CATACCCAGATTACATAGCCAACAAGGAGAGCCTGC...GGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449784.5
CDS-3UTR CCA 90 bp ACTTTGGAAATTAAAGTGAACTCTCCACTTGGGCATAATGTTATGTGGGCACATCTTTGGACATCTTCTTaGTGGGCTGCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TLEIKVNSPLGHNVMWAHLWTSS*WAASAQ
Trigger: CTGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAG...ATGTGCCCACATAACATTATGCCCAAGTGGAGAGTTCACTTTAATTTCCAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
3UTR CAA 72 bp TCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTTGTaGTTGTTGTTTAAATCACAAACGTGGGCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: SAVNYVNWLLLL*LLFKSQTWAGR
Trigger: GCGCCCGGCCCACGTTTGTGATTTAAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR TCA 90 bp ACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTGATACACTTCATTCTTaGTGCCAAGCTCACGATGGT +
Preference number: 4 (lower is better)
Translates to: TVLPGTSLLSITLTGCCCDTLHS*CQAHDG
Trigger: ACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATC...ACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449784.5
CDS-3UTR TCA 90 bp GTCTTCACTGATGCTGATGGCAAAAAGCCATGTGTAGAAGAAAAACGAAAGAGCGCCATTCTCTGGCCTTaGAATCATGATTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: VFTDADGKKPCVEEKRKSAILWP*NHDLQM
Trigger: CATCTGCAAATCATGATTTCAAGGCCAGAGAATGGC...GCTCTTTCGTTTTTCTTCTACACATGGCTTTTTGCCATCAGCATCAGTGAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000449784.5
CDS-3UTR GCA 90 bp AGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTCAGAAGTTAACTCTCTaGGGGCTGTCATCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RKTKEPLFCLELLCCQLRQKLTL*GLSSSF
Trigger: AAAAGAAGATGACAGCCCGCAGAGAGTTAACTTCTG...ACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449784.5
ENST00000452375.5
CDS-3UTR CCA 90 bp CAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATGCATGGTTCTCTTTGTACTaGTTGGCTCTCAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: QGLDNIIDILLSDVTANAWFSLY*LALRTC
Trigger: GCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCA...TGCATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CCA 90 bp AATGTTGAAACATTCTACAGGTGGGTATTCTGCACTTCACAGCACTCCAAGAGCGAAACATTCTACAGGTaGGTATTCTGCACTTCACAG +
Preference number: 4 (lower is better)
Translates to: NVETFYRWVFCTSQHSKSETFYR*VFCTSQ
Trigger: CTGTGAAGTGCAGAATACCCACCTGTAGAATGTTTC...GCTCTTGGAGTGCTGTGAAGTGCAGAATACCCACCTGTAGAATGTTTCAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436564.5
CDS-3UTR TCA 90 bp ACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTTGTTGTTGTTGTTTACTCCAGGAGATTACTTaGGGGTTTCTGTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: TSLLSITLTGCCCCCCCLLQEIT*GFLFPC
Trigger: GCAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAG...TAAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR GCA 90 bp GCTGATGGCAAAAAGCCATGTGTAGAAGAAAAACGAAAGAGCCACTGTTCTGCCGCTAGTAAAATAAACTaGTCCAGGAGATTACTTGAG +
Preference number: 4 (lower is better)
Translates to: ADGKKPCVEEKRKSHCSAASKIN*SRRLLE
Trigger: CTCAAGTAATCTCCTGGAGCAGTTTATTTTACTAGC...GGCAGAACAGTGGCTCTTTCGTTTTTCTTCTACACATGGCTTTTTGCCATCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR GCA 90 bp CCTCAAGATCCACCAGGTATGCAACCCCAAACCCCAGTCACATACATTAAATCTGCTAGTAAAATAAACTaGTCCAGGAGATTACTTGAG +
Preference number: 4 (lower is better)
Translates to: PQDPPGMQPQTPVTYIKSASKIN*SRRLLE
Trigger: CTCAAGTAATCTCCTGGAGCAGTTTATTTTACTAGC...AGATTTAATGTATGTGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CTCCACTTGGGCATAATGTTATGTGGGCACATGGATTGGCTTAAAAGGGAAACACCATCACACCATTCATaGAGGGTCTTGACAATATTA +
Preference number: 4 (lower is better)
Translates to: LHLGIMLCGHMDWLKRETPSHHS*RVLTIL
Trigger: TAATATTGTCAAGACCCTGCATGAATGGTGTGATGG...TGTTTCCCTTTTAAGCCAATCCATGTGCCCACATAACATTATGCCCAAGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGCTTGAAATCATGATTTaGAGATGTCTGAGTTCCATG +
Preference number: 4 (lower is better)
Translates to: SHCSAWNFSAVNYVNWLLLEIMI*RCLSSM
Trigger: CATGGAACTCAGACATCTGCAAATCATGATTTCAAG...CAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449784.5
ENST00000452375.5
3UTR CAA 72 bp ACTGCTTCACAGCCATCACACCATTCATGCAGGGTCTaGACAATATTATTGATATCCTTCTTTCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: TASQPSHHSCRV*TILLISFFRMS
Trigger: TGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCATGAATGGTGTGATGGCTGTGAAGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR TCA 90 bp GCTTTTTCCTCAATGAACTTTAATCAGTCCAGGACCTACAAACACACACACACAACCAGCCTGACAAAATaGCGTGGAGCAAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: AFSSMNFNQSRTYKHTHTTSLTK*RGAKEK
Trigger: TTTTTCTTTTGCTCCACGTCATTTTGTCAGGCTGGT...TGTGTGTGTGTGTTTGTAGGTCCTGGACTGATTAAAGTTCATTGAGGAAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp CACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGGCTAGTAAAATAAACTaGTCCAGGAGATTACTTGAG +
Preference number: 4 (lower is better)
Translates to: HCSAWNFSAVNYVNWLLLASKIN*SRRLLE
Trigger: CTCAAGTAATCTCCTGGAGCAGTTTATTTTACTAGC...CAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR GCA 90 bp AGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTGCTAGTAAAATAAACTaGTCCAGGAGATTACTTGAG +
Preference number: 4 (lower is better)
Translates to: RKTKEPLFCLELLCCQLRASKIN*SRRLLE
Trigger: CTCAAGTAATCTCCTGGAGCAGTTTATTTTACTAGC...ACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR GCA 90 bp AGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTCTTGAAATCATGATTTaGAGATGTCTGAGTTCCATG +
Preference number: 4 (lower is better)
Translates to: RKTKEPLFCLELLCCQLRLEIMI*RCLSSM
Trigger: CATGGAACTCAGACATCTGCAAATCATGATTTCAAG...ACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449784.5
ENST00000452375.5
CDS-3UTR CCA 90 bp GCTGATGGCAAAAAGCCATGTGTAGAAGAAAAACGAAAGAGCCACTGTTCTGCCGTCAATTACGTTAACTaGTTGTTGTTGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: ADGKKPCVEEKRKSHCSAVNYVN*LLLLLL
Trigger: CAACAACAACAACAACAACCAGTTAACGTAATTGAC...GGCAGAACAGTGGCTCTTTCGTTTTTCTTCTACACATGGCTTTTTGCCATCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CCA 90 bp ACTTTGGAAATTAAAGTGAACTCTCCACTTGGGCATAATGTTATGTGGGCACATTCTCTTTGTACTGGTTaGCTCTCAGAACTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TLEIKVNSPLGHNVMWAHSLCTG*LSELAA
Trigger: AGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGA...ATGTGCCCACATAACATTATGCCCAAGTGGAGAGTTCACTTTAATTTCCAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR GCA 90 bp AGAAGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTAGCTAGTAAAATAAACTaGTCCAGGAGATTACTTGAG +
Preference number: 4 (lower is better)
Translates to: RRKTKEPLFCLELLCCQLASKIN*SRRLLE
Trigger: CTCAAGTAATCTCCTGGAGCAGTTTATTTTACTAGC...TAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR GCA 90 bp AACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTTGTTGTTGTTGTTTAAAGAGCCACTGTTCTaGCTGGAACTTCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NFSAVNYVNWLLLLLLLFKEPLF*LELLCC
Trigger: ACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTT...AAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CCA 90 bp CACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGGTCAATTACGTTAACTaGTTGTTGTTGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: HCSAWNFSAVNYVNWLLLVNYVN*LLLLLL
Trigger: CAACAACAACAACAACAACCAGTTAACGTAATTGAC...CAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CCA 90 bp AAGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGGTCAATTACGTTAACTaGTTGTTGTTGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KKNERATVLPGTSLLSITVNYVN*LLLLLL
Trigger: CAACAACAACAACAACAACCAGTTAACGTAATTGAC...CGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR GCA 90 bp ATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCAATGCTAGTAAAATAAACTaGTCCAGGAGATTACTTGAG +
Preference number: 4 (lower is better)
Translates to: MQGLDNIIDILLSDVTANASKIN*SRRLLE
Trigger: CTCAAGTAATCTCCTGGAGCAGTTTATTTTACTAGC...ATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412922.6
ENST00000413197.5
ENST00000449784.5
CDS-3UTR CCA 90 bp CTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTTGTTGTGTCAATTACGTTAACTaGTTGTTGTTGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LPGTSLLSITLTGCCCCCVNYVN*LLLLLL
Trigger: CAACAACAACAACAACAACCAGTTAACGTAATTGAC...ACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CCA 90 bp AAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAGTCAATTACGTTAACTaGTTGTTGTTGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KNERATVLPGTSLLSITLVNYVN*LLLLLL
Trigger: CAACAACAACAACAACAACCAGTTAACGTAATTGAC...TAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
3UTR CAA 72 bp AACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTaGTTGTTGTTGTTGTTTAAATCACAAACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: NFSAVNYVNWLL*LLLLFKSQTWA
Trigger: GGCCCACGTTTGTGATTTAAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
3UTR CAA 72 bp GCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTaGTTGTTGTTGTTGTTGTTGTTTAAATCACAAACG +
Preference number: 4 (lower is better)
Translates to: AWNFSAVNYVNW*LLLLLLFKSQT
Trigger: CGTTTGTGATTTAAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR GCA 90 bp AACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTTGTTGTTGTTGTTTCAGAAGTTAACTCTCTaGGGGCTGTCATCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NFSAVNYVNWLLLLLLLFQKLTL*GLSSSF
Trigger: AAAAGAAGATGACAGCCCGCAGAGAGTTAACTTCTG...AAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449784.5
ENST00000452375.5
CDS-3UTR GCA 90 bp ACTTTGGAAATTAAAGTGAACTCTCCACTTGGGCATAATGTTATGTGGGCACATCTTGAAATCATGATTTaGAGATGTCTGAGTTCCATG +
Preference number: 4 (lower is better)
Translates to: TLEIKVNSPLGHNVMWAHLEIMI*RCLSSM
Trigger: CATGGAACTCAGACATCTGCAAATCATGATTTCAAG...ATGTGCCCACATAACATTATGCCCAAGTGGAGAGTTCACTTTAATTTCCAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611614.4
3UTR CAA 72 bp TGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTaGTTGTTGTTGTTGTTGTTTAAATCACAAACGTGG +
Preference number: 4 (lower is better)
Translates to: WNFSAVNYVNWL*LLLLLFKSQTW
Trigger: CCACGTTTGTGATTTAAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR GCA 90 bp ACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTTGTTGTTGTTGTTTAGCTAGTAAAATAAACTaGTCCAGGAGATTACTTGAG +
Preference number: 4 (lower is better)
Translates to: TSLLSITLTGCCCCCCCLASKIN*SRRLLE
Trigger: CTCAAGTAATCTCCTGGAGCAGTTTATTTTACTAGC...TAAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
3UTR CAA 72 bp GATTGGCTTAAAAGGGAAACAAGAATACTTCAACATTaGATCAACAGTAGGCAGTTGCTGGACATTTTAGAA +
Preference number: 4 (lower is better)
Translates to: DWLKRETRILQH*INSRQLLDILE
Trigger: TTCTAAAATGTCCAGCAACTGCCTACTGTTGATCAAATGTTGAAGTATTCTTGTTTCCCTTTTAAGCCAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS TCA 90 bp CTGGCTCGGCCTCCCGGCGCCTGCCCGCAGGTTGTCAAGCGTCCATaGTCACCCCGGCGTCCGGCGCTTTTCTGTCTCCGCCGACCCGTC +
Preference number: 5 (lower is better)
Translates to: LARPPGACPQVVKRP*SPRRPALFCLRRPV
Trigger: GACGGGTCGGCGGAGACAGAAAAGCGCCGGACGCCGGGGTGATCATGGACGCTTGACAACCTGCGGGCAGGCGCCGGGAGGCCGAGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620578.4
CDS-3UTR CAA 90 bp GGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGGCGCCTGCCCGCAGGTaGTCAAGCGTCCATGATCAC +
Preference number: 5 (lower is better)
Translates to: GRASISRQFQWAAGAYTPAPARR*SSVHDH
Trigger: GTGATCATGGACGCTTGACAACCTGCGGGCAGGCGC...CGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp AGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGGCGCCTGCCCGCAGGTaGTCAAGCGTCCATGATCAC +
Preference number: 5 (lower is better)
Translates to: RSFSRQRGIDATIPTQVQAPARR*SSVHDH
Trigger: GTGATCATGGACGCTTGACAACCTGCGGGCAGGCGC...CTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp GGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGGCAAGCTCCTGCACGTaGGCCAGCTCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: GRASISRQFQWAAGAYTPASSCT*ASSRSS
Trigger: AGAACTTCTGGAGCTGGCCAACGTGCAGGAGCTTGC...CGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
CDS-3UTR CAA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGTTTCGCTGGTCCAGCTaGCCCTGGATGATGTCAGTG +
Preference number: 5 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGFRWSS*PWMMSV
Trigger: CACTGACATCATCCAGGGCAAGCTGGACCAGCGAAA...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTTCGCTGGTCCAGCTaGCCCTGGATGATGTCAGTG +
Preference number: 5 (lower is better)
Translates to: ADRGASMPPSLPRCSQEEFRWSS*PWMMSV
Trigger: CACTGACATCATCCAGGGCAAGCTGGACCAGCGAAA...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCGGCAGGCTCTCCTTGTaGGCTCCTGCACGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: GASMPPSLPRCSQEELKIGRLSL*APARWP
Trigger: TGGCCAACGTGCAGGAGCCAACAAGGAGAGCCTGCC...GATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACGCAAGCTCCTGCACGTaGGCCAGCTCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHASSCT*ASSRSS
Trigger: AGAACTTCTGGAGCTGGCCAACGTGCAGGAGCTTGC...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
CDS-3UTR CAA 90 bp ACACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGTTTCGCTGGTCCAGCTaGCCCTGGATGATGTCAGTG +
Preference number: 5 (lower is better)
Translates to: TQPSITSLHGLNWSCQQGFRWSS*PWMMSV
Trigger: CACTGACATCATCCAGGGCAAGCTGGACCAGCGAAA...CCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTGTCTGACCCTGTTTaGGGATGGCATTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: SRQRGIDATIPTQVQPGGVSDPV*GWHWWS
Trigger: GCTCCACCAATGCCATCCCAAAACAGGGTCAGACAC...TCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGGTTGGCTCCTGCACGTaGGCCAGCTCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: RSFSRQRGIDATIPTQVQVGSCT*ASSRSS
Trigger: AGAACTTCTGGAGCTGGCCAACGTGCAGGAGCCAAC...CTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp GCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGGCAGGCTCTCCTTGTaGGCTCCTGCACGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: AAGAYTPKTRLSSQRQQEGRLSL*APARWP
Trigger: TGGCCAACGTGCAGGAGCCAACAAGGAGAGCCTGCC...TTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGAGAAGGGTCTTCCCGTaGGGTTTCAAGTCTCGGGAT +
Preference number: 5 (lower is better)
Translates to: ADRGASMPPSLPRCSQEERRVFP*GFKSRD
Trigger: ATCCCGAGACTTGAAACCCAACGGGAAGACCCTTCT...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611614.4
CDS-3UTR CAA 90 bp TTTGGGATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGCGCCTGCCCGCAGGTaGTCAAGCGTCCATGATCAC +
Preference number: 5 (lower is better)
Translates to: FGMALVEPLSLKGTTGEGAPARR*SSVHDH
Trigger: GTGATCATGGACGCTTGACAACCTGCGGGCAGGCGC...TCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATGCGCCTGCCCGCAGGTaGTCAAGCGTCCATGATCAC +
Preference number: 5 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHAPARR*SSVHDH
Trigger: GTGATCATGGACGCTTGACAACCTGCGGGCAGGCGC...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp ATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGTGCCATTCTCTGGCCTaGAAATCTGTCCACGCCACC +
Preference number: 5 (lower is better)
Translates to: ITSLHGLNWSCQQGMRQECHSLA*KSVHAT
Trigger: GGTGGCGTGGACAGATTTCAAGGCCAGAGAATGGCA...CTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp CCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGAGGGAAAGTTTCGCTGGTCCAGCTaGCCCTGGATGATGTCAGTG +
Preference number: 5 (lower is better)
Translates to: PPRPELELPTRDEAGEGKFRWSS*PWMMSV
Trigger: CACTGACATCATCCAGGGCAAGCTGGACCAGCGAAA...CTTTCCCTCTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGCGGTTGTGGTTCTCTTaGTACTGGTTGGCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: ADRGASMPPSLPRCSQEERLWFS*YWLALR
Trigger: TCTGAGAGCCAACCAGTACAAAGAGAACCACAACCG...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GTGGCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACTGTTTTGGGATGGCATaGGTGGAGCCCCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: VARRERQAGRNHFCHPADCFGMA*VEPLSL
Trigger: CAGACTCAGGGGCTCCACCAATGCCATCCCAAAACA...GTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp ATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGGTGTCTGACCCTGTTTaGGGATGGCATTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: ITSLHGLNWSCQQGMRQEVSDPV*GWHWWS
Trigger: GCTCCACCAATGCCATCCCAAAACAGGGTCAGACAC...CTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACGTGTCTGACCCTGTTTaGGGATGGCATTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHVSDPV*GWHWWS
Trigger: GCTCCACCAATGCCATCCCAAAACAGGGTCAGACAC...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GTGGCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACGCTCCAGGAGATTACTaGAGGGTTTCTGTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: VARRERQAGRNHFCHPADAPGDY*RVSVPL
Trigger: CAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAGC...GTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGGAGCCACTGGTACCTTaGGCTAGTAAAATAAACTGC +
Preference number: 5 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGEPLVP*ASKINC
Trigger: GCAGTTTATTTTACTAGCCAAAGGTACCAGTGGCTC...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGTTTCGCTGGTCCAGCTaGCCCTGGATGATGTCAGTG +
Preference number: 5 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQFRWSS*PWMMSV
Trigger: CACTGACATCATCCAGGGCAAGCTGGACCAGCGAAA...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGAGTGTCTTCTTGATGTaGGTAACCTCTGCTTCTACC +
Preference number: 5 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGSVFLM*VTSAST
Trigger: GGTAGAAGCAGAGGTTACCAACATCAAGAAGACACT...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CGTGAGGACTGTGGTACCAGGGGCTGGAGAGGAGTGCCCCCTCCTCACAAGGGGGCTTTGAGTGTCTTCTaGATGTTGGTAACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: REDCGTRGWRGVPPPHKGALSVF*MLVTSA
Trigger: AGCAGAGGTTACCAACATCAAGAAGACACTCAAAGC...CCCCTTGTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGTCCTCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GTGGCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACACTTTGGACATCTTCTaGGTGGGCTGCCTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: VARRERQAGRNHFCHPADTLDIF*VGCLCS
Trigger: TGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAGT...GTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGGCGGGTTTGTGAATTaGCGCACACTGCGCGGCACA +
Preference number: 5 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGGGFVN*RTLRGT
Trigger: TGTGCCGCGCAGTGTGCGCAAATTCACAAACCCGCC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000409295.5
ENST00000611614.4
CDS-3UTR CAA 90 bp GATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGGGAGGCTCCAGGAGATTACTaGAGGGTTTCTGTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: DGIGGAPESEGNNWGRREAPGDY*RVSVPL
Trigger: CAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAGC...CTCCCTCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCTGCCCCAGCCGGCCCTAGTGGCGGCTGGAGACCAGACCTTTCACTTTGGACAGAGCCACTGGTACCTTaGGCTAGTAAAATAAACTGC +
Preference number: 5 (lower is better)
Translates to: AAPAGPSGGWRPDLSLWTEPLVP*ASKINC
Trigger: GCAGTTTATTTTACTAGCCAAAGGTACCAGTGGCTC...TGTCCAAAGTGAAAGGTCTGGTCTCCAGCCGCCACTAGGGCCGGCTGGGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412922.6
ENST00000413197.5
CDS-3UTR CAA 90 bp AGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGATTCTCTTTGTACTGGTaGGCTCTCAGAACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: SRQRGIDATIPTQVQPGGFSLYW*ALRTCC
Trigger: GCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAA...TCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGACGGTTGTGGTTCTCTTaGTACTGGTTGGCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: FSRQRGIDATIPTQVQPGRLWFS*YWLALR
Trigger: TCTGAGAGCCAACCAGTACAAAGAGAACCACAACCG...TCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGCGGTTGTGGTTCTCTTaGTACTGGTTGGCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: ATGPSADRGASMPPSLPRRLWFS*YWLALR
Trigger: TCTGAGAGCCAACCAGTACAAAGAGAACCACAACCG...CCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACCCAGAGGATGCGGTGGCTTaGAGTGTCTTCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: ARRERQAGRNHFCHPADPEDAVA*SVFLML
Trigger: CAACATCAAGAAGACACTCAAAGCCACCGCATCCTC...TGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGAGGGAAAGGAGGATGCGGTGGCTTaGAGTGTCTTCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: PPRPELELPTRDEAGEGKEDAVA*SVFLML
Trigger: CAACATCAAGAAGACACTCAAAGCCACCGCATCCTC...CTTTCCCTCTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GTGGCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACGAGGATGCGGTGGCTTaGAGTGTCTTCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: VARRERQAGRNHFCHPADEDAVA*SVFLML
Trigger: CAACATCAAGAAGACACTCAAAGCCACCGCATCCTC...GTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTGGAGCCCCTGAGACTTTGGACATCTTCTaGGTGGGCTGCCTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: EAGQCLTLFWDGIGGAPETLDIF*VGCLCS
Trigger: TGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAGT...CTCAGGGGCTCCACCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGACCAGACCTTTCACTTaGGACATCTTCTTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: ATGPSADRGASMPPSLPRTRPFT*DIFLVG
Trigger: GCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGGT...CCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp ATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGACCAGACCTTTCACTTaGGACATCTTCTTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: ITSLHGLNWSCQQGMRQETRPFT*DIFLVG
Trigger: GCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGGT...CTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAATGTTTTGGGATGGCATaGGTGGAGCCCCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: AAGAYTPKTRLSSQRQQECFGMA*VEPLSL
Trigger: CAGACTCAGGGGCTCCACCAATGCCATCCCAAAACA...TTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CCACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTGTTTTGGGATGGCATaGGTGGAGCCCCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: PQHPLSVLRYQRLVNPALCFGMA*VEPLSL
Trigger: CAGACTCAGGGGCTCCACCAATGCCATCCCAAAACA...GAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGTGTCTGACCCTGTTTaGGGATGGCATTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: AAGAYTPKTRLSSQRQQEVSDPV*GWHWWS
Trigger: GCTCCACCAATGCCATCCCAAAACAGGGTCAGACAC...TTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACAAAATGACGTGGAGCGGCGGGTTTGTGAATTaGCGCACACTGCGCGGCACA +
Preference number: 5 (lower is better)
Translates to: GWLKLPPAYNQPDKMTWSGGFVN*RTLRGT
Trigger: TGTGCCGCGCAGTGTGCGCAAATTCACAAACCCGCC...GCTCCACGTCATTTTGTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611614.4
CDS GCA 90 bp CTGAGAAGAATCAAGGATGAACAAGATGGGCTTTGCCAGGGCTGCTaGATGGCACAACTCCAGGGCCACCAACCACCTGGAGGTGTGCAA +
Preference number: 5 (lower is better)
Translates to: LRRIKDEQDGLCQGC*MAQLQGHQPPGGVQ
Trigger: TTGCACACCTCCAGGTGGTTGGTGGCCCTGGAGTTGTGCCATGCAGCAGCCCTGGCAAAGCCCATCTTGTTCATCCTTGATTCTTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488111.1
CDS-3UTR CAA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGTGCCATTCTCTGGCCTaGAAATCTGTCCACGCCACC +
Preference number: 5 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRCHSLA*KSVHAT
Trigger: GGTGGCGTGGACAGATTTCAAGGCCAGAGAATGGCA...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp CTAGTTCCCGGAGATTCCGCATCTCCAGGTCTTTCAGCAACACGGAGTAGGGGATGCCATTCTCTGGCCTaGAAATCTGTCCACGCCACC +
Preference number: 5 (lower is better)
Translates to: LVPGDSASPGLSATRSRGCHSLA*KSVHAT
Trigger: GGTGGCGTGGACAGATTTCAAGGCCAGAGAATGGCA...TCCCCTACTCCGTGTTGCTGAAAGACCTGGAGATGCGGAATCTCCGGGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413197.5
CDS-3UTR CAA 90 bp TCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGTTAAAGATCTTGGGATGCCATTCTCTGGCCTaGAAATCTGTCCACGCCACC +
Preference number: 5 (lower is better)
Translates to: SMPPSLPRCSQEELKILGCHSLA*KSVHAT
Trigger: GGTGGCGTGGACAGATTTCAAGGCCAGAGAATGGCA...TCCCAAGATCTTTAACTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp CCACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCGCTCCAGGAGATTACTaGAGGGTTTCTGTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: PQHPLSVLRYQRLVNPALAPGDY*RVSVPL
Trigger: CAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAGC...GAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGCCACTGGTACCTTaGGCTAGTAAAATAAACTGC +
Preference number: 5 (lower is better)
Translates to: SADRGASMPPSLPRCSQEEPLVP*ASKINC
Trigger: GCAGTTTATTTTACTAGCCAAAGGTACCAGTGGCTC...CTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGATGAGGCAGGAGAGGGAAAGGGATACACTTCATTCTaGATGCCAAGCTCACGATGG +
Preference number: 5 (lower is better)
Translates to: PPRPELELPTRDEAGEGKGYTSF*MPSSRW
Trigger: CCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCC...CTTTCCCTCTCCTGCCTCATCCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp TTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGATACACTTCATTCTaGATGCCAAGCTCACGATGG +
Preference number: 5 (lower is better)
Translates to: FSRQRGIDATIPTQVQPGGYTSF*MPSSRW
Trigger: CCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCC...TCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGTTTCGCTGGTCCAGCTaGCCCTGGATGATGTCAGTG +
Preference number: 5 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGFRWSS*PWMMSV
Trigger: CACTGACATCATCCAGGGCAAGCTGGACCAGCGAAA...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACTTCTCTTTGTACTGGTaGGCTCTCAGAACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHFSLYW*ALRTCC
Trigger: GCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAA...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTCGGTTGTGGTTCTCTTaGTACTGGTTGGCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: QQVLQQTEGHRCHHPYPGRLWFS*YWLALR
Trigger: TCTGAGAGCCAACCAGTACAAAGAGAACCACAACCG...ACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGAGCTTTGAGTGTCTTCTaGATGTTGGTAACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: GEQALAGSSSGQLGPTHRALSVF*MLVTSA
Trigger: AGCAGAGGTTACCAACATCAAGAAGACACTCAAAGC...TCGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGTGGAGCCCCTGAGGAGGATGCGGTGGCTTaGAGTGTCTTCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: EAGQCLTLFWDGIGGAPEEDAVA*SVFLML
Trigger: CAACATCAAGAAGACACTCAAAGCCACCGCATCCTC...CTCAGGGGCTCCACCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CCACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCACTTTGGACATCTTCTaGGTGGGCTGCCTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: PQHPLSVLRYQRLVNPALTLDIF*VGCLCS
Trigger: TGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAGT...GAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGGGAGACCAGACCTTTCACTTaGGACATCTTCTTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: DGIGGAPESEGNNWGRRETRPFT*DIFLVG
Trigger: GCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGGT...CTCCCTCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGTGTTTTGGGATGGCATaGGTGGAGCCCCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: LKILGEQALAGSSSGQLGCFGMA*VEPLSL
Trigger: CAGACTCAGGGGCTCCACCAATGCCATCCCAAAACA...CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGGTGTCTGACCCTGTTTaGGGATGGCATTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: LKILGEQALAGSSSGQLGVSDPV*GWHWWS
Trigger: GCTCCACCAATGCCATCCCAAAACAGGGTCAGACAC...CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGTGTCTGACCCTGTTTaGGGATGGCATTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGVSDPV*GWHWWS
Trigger: GCTCCACCAATGCCATCCCAAAACAGGGTCAGACAC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS TCA 90 bp TCAAGTCTCGGGATTCCGAAACGACCAACTCAGCGGGCGGGTTTGTaGATTTGCGCACACTGCGCGGCACACTGGAGTCTAAGTTACAGA +
Preference number: 5 (lower is better)
Translates to: SSLGIPKRPTQRAGL*ICAHCAAHWSLSYR
Trigger: TCTGTAACTTAGACTCCAGTGTGCCGCGCAGTGTGCGCAAATTCACAAACCCGCCCGCTGAGTTGGTCGTTTCGGAATCCCGAGACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409091.5
ENST00000409295.5
ENST00000410024.5
ENST00000611614.4
CDS GCA 90 bp CTCCCGTTCAGCCAGCTGCTGCTCCATCTCCTGAGCCGAGGAGGATaGGGTGGCTTTGAGTGTCTTCTTGATGTTGGTAACCAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: LPFSQLLLHLLSRGG*GGFECLLDVGNQKK
Trigger: TTTCTTCTGGTTACCAACATCAAGAAGACACTCAAAGCCACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCAGCTGGCTGAACGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373608.7
ENST00000410017.5
ENST00000461350.5
CDS-3UTR CAA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGCTCCAGGAGATTACTaGAGGGTTTCTGTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRAPGDY*RVSVPL
Trigger: CAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAGC...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGCTCCAGGAGATTACTaGAGGGTTTCTGTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGAPGDY*RVSVPL
Trigger: CAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAGC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TTTGGGATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGCTCCAGGAGATTACTaGAGGGTTTCTGTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: FGMALVEPLSLKGTTGEGAPGDY*RVSVPL
Trigger: CAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAGC...TCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACCCAGAGCCACTGGTACCTTaGGCTAGTAAAATAAACTGC +
Preference number: 5 (lower is better)
Translates to: ARRERQAGRNHFCHPADPEPLVP*ASKINC
Trigger: GCAGTTTATTTTACTAGCCAAAGGTACCAGTGGCTC...TGGGTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGGATGCGGTGGCTTaGAGTGTCTTCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: AAGAYTPKTRLSSQRQQEEDAVA*SVFLML
Trigger: CAACATCAAGAAGACACTCAAAGCCACCGCATCCTC...TTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGGAGGATGCGGTGGCTTaGAGTGTCTTCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEEEDAVA*SVFLML
Trigger: CAACATCAAGAAGACACTCAAAGCCACCGCATCCTC...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGACTTTGGACATCTTCTaGGTGGGCTGCCTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGTLDIF*VGCLCS
Trigger: TGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAGT...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCACGACTTTGGACATCTTCTaGGTGGGCTGCCTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: RLKTRGFSKHSPASRPSTTLDIF*VGCLCS
Trigger: TGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAGT...CGTGGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGAGAAGGGTCTTCCCGTaGGGTTTCAAGTCTCGGGAT +
Preference number: 5 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRRRVFP*GFKSRD
Trigger: ATCCCGAGACTTGAAACCCAACGGGAAGACCCTTCT...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409295.5
ENST00000611614.4
CDS TCA 90 bp CTTGATGCCAAGCTCACGATGGTAAGATGCTTCAGCTTGTTCTGCTaGGCTGTGCTCAGTTCTGGCAGGCTCTCCTTGTTGGCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: LDAKLTMVRCFSLFC*AVLSSGRLSLLAPA
Trigger: TGCAGGAGCCAACAAGGAGAGCCTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATCGTGAGCTTGGCATCAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413197.5
ENST00000620578.4
CDS TCA 90 bp CTTGATGCCAAGCTCACGATGGTAAGATGCTTCAGCTTGTTCTGCTaGGCTGTGCTCAGTTCTGGCAGGCTCTCCTTGTTGGCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: LDAKLTMVRCFSLFC*AVLSSGRLSLLAAQ
Trigger: CTGAGCAGCCAACAAGGAGAGCCTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATCGTGAGCTTGGCATCAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488111.1
CDS-3UTR CAA 90 bp CACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCATGCCATTCTCTGGCCTaGAAATCTGTCCACGCCACC +
Preference number: 5 (lower is better)
Translates to: HIFLNHPNPSPSRSTRYACHSLA*KSVHAT
Trigger: GGTGGCGTGGACAGATTTCAAGGCCAGAGAATGGCA...TGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp GGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACAAAATGACGTGGAGCGCTCCAGGAGATTACTaGAGGGTTTCTGTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: GWLKLPPAYNQPDKMTWSAPGDY*RVSVPL
Trigger: CAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAGC...GCTCCACGTCATTTTGTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GATGGCATTGGTGGAGCCCCTGAGTCTGAAGGGAACAACTGGGGAAGGAGGGAGGAGCCACTGGTACCTTaGGCTAGTAAAATAAACTGC +
Preference number: 5 (lower is better)
Translates to: DGIGGAPESEGNNWGRREEPLVP*ASKINC
Trigger: GCAGTTTATTTTACTAGCCAAAGGTACCAGTGGCTC...CTCCCTCCTTCCCCAGTTGTTCCCTTCAGACTCAGGGGCTCCACCAATGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CAAGCTCACGATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCGCAAGCTCCTGCACGTaGGCCAGCTCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: QAHDGKMLQLVLLSCAQFASSCT*ASSRSS
Trigger: AGAACTTCTGGAGCTGGCCAACGTGCAGGAGCTTGC...GAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATCGTGAGCTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436564.5
CDS-3UTR CAA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGGGATACACTTCATTCTaGATGCCAAGCTCACGATGG +
Preference number: 5 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEEGYTSF*MPSSRW
Trigger: CCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCC...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp CCACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCGGATACACTTCATTCTaGATGCCAAGCTCACGATGG +
Preference number: 5 (lower is better)
Translates to: PQHPLSVLRYQRLVNPALGYTSF*MPSSRW
Trigger: CCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCC...GAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp GCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAATTCTCTTTGTACTGGTaGGCTCTCAGAACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: AAGAYTPKTRLSSQRQQEFSLYW*ALRTCC
Trigger: GCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAA...TTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGCGGTTGTGGTTCTCTTaGTACTGGTTGGCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGRLWFS*YWLALR
Trigger: TCTGAGAGCCAACCAGTACAAAGAGAACCACAACCG...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGGAGGATGCGGTGGCTTaGAGTGTCTTCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGEDAVA*SVFLML
Trigger: CAACATCAAGAAGACACTCAAAGCCACCGCATCCTC...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACAAAATGACGTGGAGCACTTTGGACATCTTCTaGGTGGGCTGCCTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: GWLKLPPAYNQPDKMTWSTLDIF*VGCLCS
Trigger: TGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAGT...GCTCCACGTCATTTTGTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGACCAGACCTTTCACTTaGGACATCTTCTTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRTRPFT*DIFLVG
Trigger: GCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGGT...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGACCAGACCTTTCACTTaGGACATCTTCTTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: LKILGEQALAGSSSGQLGTRPFT*DIFLVG
Trigger: GCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGGT...CCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCACGACCAGACCTTTCACTTaGGACATCTTCTTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: RLKTRGFSKHSPASRPSTTRPFT*DIFLVG
Trigger: GCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGGT...CGTGGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACCGATTAAGTCTTTTTCTCTaGCCAGGAGAATGCCATCAT +
Preference number: 5 (lower is better)
Translates to: GEQALAGSSSGQLGPTHRLSLFL*PGECHH
Trigger: ATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA...TCGGTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GTGGCCAGGAGAGAACGCCAAGCCGGAAGGAACCATTTCTGCCACCCAGCAGACGGAGAAATCCATTTTTaGACCATGGCTAAACATGGG +
Preference number: 5 (lower is better)
Translates to: VARRERQAGRNHFCHPADGEIHF*TMAKHG
Trigger: CCCATGTTTAGCCATGGTCAAAAAATGGATTTCTCC...GTCTGCTGGGTGGCAGAAATGGTTCCTTCCGGCTTGGCGTTCTCTCCTGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGGGCCTACACACGGAGAAATCCATTTTTaGACCATGGCTAAACATGGG +
Preference number: 5 (lower is better)
Translates to: LGEQALAGSSSGQLGPTHGEIHF*TMAKHG
Trigger: CCCATGTTTAGCCATGGTCAAAAAATGGATTTCTCC...GTGTGTAGGCCCCAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCAGACAGAGGGGCATCGATGCCACCATCCCTACCCAGGTGCAGCCAGGAGGAGAGAATACTTCAACATTaGATCAACAGTAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: ADRGASMPPSLPRCSQEERILQH*INSRQL
Trigger: CAACTGCCTACTGTTGATCAAATGTTGAAGTATTCT...CTCCTCCTGGCTGCACCTGGGTAGGGATGGTGGCATCGATGCCCCTCTGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CAAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGTCTGGCAGGCTCTCCTaGTTGGCTCCTGCACGTTGG +
Preference number: 5 (lower is better)
Translates to: QKKNWEGDKPLHRDKNLLSGRLS*LAPARW
Trigger: CCAACGTGCAGGAGCCAACAAGGAGAGCCTGCCAGA...CAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGATACACTCCTGCACGTaGGCCAGCTCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: ELKILGEQALAGSSSGQLIHSCT*ASSRSS
Trigger: AGAACTTCTGGAGCTGGCCAACGTGCAGGAGTGTAT...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611614.4
CDS-3UTR CAA 90 bp AAGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGGCGCCTGCCCGCAGGTaGTCAAGCGTCCATGATCAC +
Preference number: 5 (lower is better)
Translates to: KKNERATVLPGTSLLSITAPARR*SSVHDH
Trigger: GTGATCATGGACGCTTGACAACCTGCGGGCAGGCGC...CGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000450501.5
CDS-3UTR CAA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACGGATACACTTCATTCTaGATGCCAAGCTCACGATGG +
Preference number: 5 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDGYTSF*MPSSRW
Trigger: CCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCC...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGATACACTTCATTCTaGATGCCAAGCTCACGATGG +
Preference number: 5 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRGYTSF*MPSSRW
Trigger: CCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCC...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp AGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGGTTCTCTTTGTACTGGTaGGCTCTCAGAACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: SNSFSGTVPTGWGGAGEGFSLYW*ALRTCC
Trigger: GCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAA...CCCCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000409295.5
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATTTCTCTTTGTACTGGTaGGCTCTCAGAACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHFSLYW*ALRTCC
Trigger: GCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAA...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGGCTTTGAGTGTCTTCTaGATGTTGGTAACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEEALSVF*MLVTSA
Trigger: AGCAGAGGTTACCAACATCAAGAAGACACTCAAAGC...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GAGTTAAAGATCTTGGGAGAGCAAGCATTAGCCGGCAGTTCCAGTGGGCAGCTGGAGGATGCGGTGGCTTaGAGTGTCTTCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: ELKILGEQALAGSSSGQLEDAVA*SVFLML
Trigger: CAACATCAAGAAGACACTCAAAGCCACCGCATCCTC...CAGCTGCCCACTGGAACTGCCGGCTAATGCTTGCTCTCCCAAGATCTTTAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AAACAGCATCACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCTGTTTTGGGATGGCATaGGTGGAGCCCCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: KQHHIFLNHPNPSPSRSTCFGMA*VEPLSL
Trigger: CAGACTCAGGGGCTCCACCAATGCCATCCCAAAACA...GGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTGATGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGGAGAAATCCATTTTTaGACCATGGCTAAACATGGG +
Preference number: 5 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQGEIHF*TMAKHG
Trigger: CCCATGTTTAGCCATGGTCAAAAAATGGATTTCTCC...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp ACACAGCCCAGCATCACGTCCCTCCACGGCCTGAACTGGAGCTGCCAACAAGGGAGAATACTTCAACATTaGATCAACAGTAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: TQPSITSLHGLNWSCQQGRILQH*INSRQL
Trigger: CAACTGCCTACTGTTGATCAAATGTTGAAGTATTCT...CCCTTGTTGGCAGCTCCAGTTCAGGCCGTGGAGGGACGTGATGCTGGGCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGAGTGTCTTCTTGATGTaGGTAACCAGAAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQSVFLM*VTRRKL
Trigger: CAGCTTTCTTCTGGTTACCAACATCAAGAAGACACT...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373608.7
ENST00000410017.5
CDS-3UTR CAA 90 bp CCTCAAGATCCACCAGGTATGCAACCCCAAACCCCAGTCACATACATTAAATCTTCTGGCAGGCTCTCCTaGTTGGCTCCTGCACGTTGG +
Preference number: 5 (lower is better)
Translates to: PQDPPGMQPQTPVTYIKSSGRLS*LAPARW
Trigger: CCAACGTGCAGGAGCCAACAAGGAGAGCCTGCCAGA...AGATTTAATGTATGTGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp AGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGGGCGGGTTTGTGAATTaGCGCACACTGCGCGGCACA +
Preference number: 5 (lower is better)
Translates to: SHCSAWNFSAVNYVNWLLGGFVN*RTLRGT
Trigger: TGTGCCGCGCAGTGTGCGCAAATTCACAAACCCGCC...CAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449784.5
ENST00000452375.5
CDS-3UTR CAA 90 bp CAAGCTCACGATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCTCTGGCAGGCTCTCCTaGTTGGCTCAAGTGATCTGC +
Preference number: 5 (lower is better)
Translates to: QAHDGKMLQLVLLSCAQFSGRLS*LAQVIC
Trigger: GCAGATCACTTGAGCCAACAAGGAGAGCCTGCCAGA...GAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATCGTGAGCTTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436564.5
CDS-3UTR CAA 90 bp CAAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGTGCCATTCTCTGGCCTaGAAATCTGTCCACGCCACC +
Preference number: 5 (lower is better)
Translates to: QKKNWEGDKPLHRDKNLLCHSLA*KSVHAT
Trigger: GGTGGCGTGGACAGATTTCAAGGCCAGAGAATGGCA...CAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp CCTCAAGATCCACCAGGTATGCAACCCCAAACCCCAGTCACATACATTAAATCTGCAAGCTCCTGCACGTaGGCCAGCTCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: PQDPPGMQPQTPVTYIKSASSCT*ASSRSS
Trigger: AGAACTTCTGGAGCTGGCCAACGTGCAGGAGCTTGC...AGATTTAATGTATGTGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350033.8
ENST00000373608.7
CDS-3UTR CAA 90 bp AGCAGCATTAGCTCCTTCCGCAAGTCTTCACTGATGCTGATGGCAAAAAGCCATTTTCGCTGGTCCAGCTaGCCCTGGATGATGTCAGTG +
Preference number: 5 (lower is better)
Translates to: SSISSFRKSSLMLMAKSHFRWSS*PWMMSV
Trigger: CACTGACATCATCCAGGGCAAGCTGGACCAGCGAAA...ATGGCTTTTTGCCATCAGCATCAGTGAAGACTTGCGGAAGGAGCTAATGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449784.5
CDS-3UTR CAA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGAGTGTCTTCTTGATGTaGGTAACCTCTGCTTCTACC +
Preference number: 5 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRSVFLM*VTSAST
Trigger: GGTAGAAGCAGAGGTTACCAACATCAAGAAGACACT...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000409295.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATAGTGTCTTCTTGATGTaGGTAACCTCTGCTTCTACC +
Preference number: 5 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHSVFLM*VTSAST
Trigger: GGTAGAAGCAGAGGTTACCAACATCAAGAAGACACT...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp ACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACAGTGTCTTCTTGATGTaGGTAACCTCTGCTTCTACC +
Preference number: 5 (lower is better)
Translates to: TIIPGGWLKLPPAYNQPDSVFLM*VTSAST
Trigger: GGTAGAAGCAGAGGTTACCAACATCAAGAAGACACT...GTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGGCTTTGAGTGTCTTCTaGATGTTGGTAACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRALSVF*MLVTSA
Trigger: AGCAGAGGTTACCAACATCAAGAAGACACTCAAAGC...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350033.8
ENST00000409295.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGTGTTTTGGGATGGCATaGGTGGAGCCCCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: KRKTGRETSPYTETRTSWCFGMA*VEPLSL
Trigger: CAGACTCAGGGGCTCCACCAATGCCATCCCAAAACA...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TGGGCAGCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGTTAAGTCTTTTTCTCTaGCCAGGAGAATGCCATCAT +
Preference number: 5 (lower is better)
Translates to: WAAGAYTPKTRLSSQRQQLSLFL*PGECHH
Trigger: ATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA...CTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGCTGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CCTCAAGATCCACCAGGTATGCAACCCCAAACCCCAGTCACATACATTAAATCTGTTGGCTCCTGCACGTaGGCCAGCTCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: PQDPPGMQPQTPVTYIKSVGSCT*ASSRSS
Trigger: AGAACTTCTGGAGCTGGCCAACGTGCAGGAGCCAAC...AGATTTAATGTATGTGACTGGGGTTTGGGGTTGCATACCTGGTGGATCTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413197.5
ENST00000620578.4
CDS-3UTR CAA 90 bp GGAGTAACAGTTTTTCTGGAACAGTACCAACAGGGTGGGGAGGCGCTGGTGAGGTTCCGCAAGCATGATTaGCAGATGTCTGAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: GVTVFLEQYQQGGEALVRFRKHD*QMSEFH
Trigger: ATGGAACTCAGACATCTGCAAATCATGCTTGCGGAA...CCTCACCAGCGCCTCCCCACCCTGTTGGTACTGTTCCAGAAAAACTGTTACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409295.5
CDS TCA 90 bp GAGCATCTGTTGTGTGCAATGCTCTGTACTGAGAAGAATCAAGGATaGACAAGATGGGCTTTGCCAGGGCTGCTGCATGGCACAACTCCA +
Preference number: 5 (lower is better)
Translates to: EHLLCAMLCTEKNQG*TRWALPGLLHGTTP
Trigger: TGGAGTTGTGCCATGCAGCAGCCCTGGCAAAGCCCATCTTGTTCATCCTTGATTCTTCTCAGTACAGAGCATTGCACACAACAGATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488111.1
CDS-3UTR CAA 90 bp GAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGCCATTCTCTGGCCTaGAAATCTGTCCACGCCACC +
Preference number: 5 (lower is better)
Translates to: ERATVLPGTSLLSITLTGCHSLA*KSVHAT
Trigger: GGTGGCGTGGACAGATTTCAAGGCCAGAGAATGGCA...ACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000450501.5
CDS-3UTR CAA 90 bp GCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGCCATTCTCTGGCCTaGAAATCTGTCCACGCCACC +
Preference number: 5 (lower is better)
Translates to: ATVLPGTSLLSITLTGCCCHSLA*KSVHAT
Trigger: GGTGGCGTGGACAGATTTCAAGGCCAGAGAATGGCA...ACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000450501.5
CDS-3UTR CAA 90 bp AGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGCCATTCTCTGGCCTaGAAATCTGTCCACGCCACC +
Preference number: 5 (lower is better)
Translates to: RATVLPGTSLLSITLTGCCHSLA*KSVHAT
Trigger: GGTGGCGTGGACAGATTTCAAGGCCAGAGAATGGCA...ACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000450501.5
CDS-3UTR CAA 90 bp GGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTGACAAAATGACGTGGAGCGAGCCACTGGTACCTTaGGCTAGTAAAATAAACTGC +
Preference number: 5 (lower is better)
Translates to: GWLKLPPAYNQPDKMTWSEPLVP*ASKINC
Trigger: GCAGTTTATTTTACTAGCCAAAGGTACCAGTGGCTC...GCTCCACGTCATTTTGTCAGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CAGGTTCAACAACTGCAAATAAGCAGCATTAGCTCCTTCCGCAAGTCTTCACTGCTCTACTCCTGCACGTaGGCCAGCTCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: QVQQLQISSISSFRKSSLLYSCT*ASSRSS
Trigger: AGAACTTCTGGAGCTGGCCAACGTGCAGGAGTAGAG...CAGTGAAGACTTGCGGAAGGAGCTAATGCTGCTTATTTGCAGTTGTTGAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449784.5
CDS-3UTR CAA 90 bp GATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCTGTGCTCAGTTCTGGCAGGCTGGATACACTTCATTCTaGATGCCAAGCTCACGATGG +
Preference number: 5 (lower is better)
Translates to: DGKMLQLVLLSCAQFWQAGYTSF*MPSSRW
Trigger: CCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCC...AGCCTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436564.5
ENST00000449784.5
CDS-3UTR CAA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGCGGTTGTGGTTCTCTTaGTACTGGTTGGCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: LRYQRLVNPALSTNWRSERLWFS*YWLALR
Trigger: TCTGAGAGCCAACCAGTACAAAGAGAACCACAACCG...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AAGAGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCGCTTTGAGTGTCTTCTaGATGTTGGTAACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: KRLKTRGFSKHSPASRPSALSVF*MLVTSA
Trigger: AGCAGAGGTTACCAACATCAAGAAGACACTCAAAGC...GGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATGGAGAAATCCATTTTTaGACCATGGCTAAACATGGG +
Preference number: 5 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHGEIHF*TMAKHG
Trigger: CCCATGTTTAGCCATGGTCAAAAAATGGATTTCTCC...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTTGTTGTTGGGCGGGTTTGTGAATTaGCGCACACTGCGCGGCACA +
Preference number: 5 (lower is better)
Translates to: AWNFSAVNYVNWLLLLLLGGFVN*RTLRGT
Trigger: TGTGCCGCGCAGTGTGCGCAAATTCACAAACCCGCC...CAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449784.5
ENST00000452375.5
CDS-3UTR CAA 90 bp CGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGAGAAGGGTCTTCCCGTaGGGTTTCAAGTCTCGGGAT +
Preference number: 5 (lower is better)
Translates to: RKSHCSAWNFSAVNYVNWRRVFP*GFKSRD
Trigger: ATCCCGAGACTTGAAACCCAACGGGAAGACCCTTCT...CCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449784.5
ENST00000452375.5
CDS-3UTR CAA 90 bp AATGTTGAAACATTCTACAGGTGGGTATTCTGCACTTCACAGCACTCCAAGAGCGGCAGGCTCTCCTTGTaGGCTCAAGTGATCTGCCTG +
Preference number: 5 (lower is better)
Translates to: NVETFYRWVFCTSQHSKSGRLSL*AQVICL
Trigger: CAGGCAGATCACTTGAGCCAACAAGGAGAGCCTGCC...GCTCTTGGAGTGCTGTGAAGTGCAGAATACCCACCTGTAGAATGTTTCAACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436564.5
CDS-3UTR CAA 90 bp AAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACCGTCTCTCCTGCACGTaGGCCAGCTCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: KRKSHCSAWNFSAVNYVNRLSCT*ASSRSS
Trigger: AGAACTTCTGGAGCTGGCCAACGTGCAGGAGAGACG...GTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452375.5
CDS-3UTR CAA 90 bp AAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGGCTCCAGGAGATTACTaGAGGGTTTCTGTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: KSHCSAWNFSAVNYVNWLAPGDY*RVSVPL
Trigger: CAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAGC...CAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CAA 90 bp TGTGTAGAAGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCGCTCCAGGAGATTACTaGAGGGTTTCTGTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: CVEEKRKSHCSAWNFSAVAPGDY*RVSVPL
Trigger: CAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAGC...GACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCTTCTACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CAA 90 bp GCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTGCTCCAGGAGATTACTaGAGGGTTTCTGTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: ATVLPGTSLLSITLTGCCAPGDY*RVSVPL
Trigger: CAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAGC...ACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CAA 90 bp ATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCAACCGAGCCACTGGTACCTTaGGCTAGTAAAATAAACTGC +
Preference number: 5 (lower is better)
Translates to: IFLNHPNPSPSRSTRYATEPLVP*ASKINC
Trigger: GCAGTTTATTTTACTAGCCAAAGGTACCAGTGGCTC...GGTTGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGCTCTACTCCTGCACGTaGGCCAGCTCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: HCSAWNFSAVNYVNWLLLLYSCT*ASSRSS
Trigger: AGAACTTCTGGAGCTGGCCAACGTGCAGGAGTAGAG...CAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357490.6
ENST00000449784.5
CDS-3UTR CAA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGTTCTCTTTGTACTGGTaGGCTCTCAGAACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: LRYQRLVNPALSTNWRSEFSLYW*ALRTCC
Trigger: GCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAA...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AGACAGAAGCAGCAACAGGTCCTTCAGCAGACAGAGGGGCATCGATGCCACCATTTAAGTCTTTTTCTCTaGCCAGGAGAATGCCATCAT +
Preference number: 5 (lower is better)
Translates to: RQKQQQVLQQTEGHRCHHLSLFL*PGECHH
Trigger: ATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA...ATGGTGGCATCGATGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp ACAGCACCCTCTGTCTGTGCTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCTTAAGTCTTTTTCTCTaGCCAGGAGAATGCCATCAT +
Preference number: 5 (lower is better)
Translates to: TAPSVCAQIPEVSQPSALLSLFL*PGECHH
Trigger: ATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA...GAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAGCACAGACAGAGGGTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AACCTCCTGGAGGGAAGCTGGGCAGTGTCTGACCCTGTTTTGGGATGGCATTGGAGAATACTTCAACATTaGATCAACAGTAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: NLLEGSWAVSDPVLGWHWRILQH*INSRQL
Trigger: CAACTGCCTACTGTTGATCAAATGTTGAAGTATTCT...CCAATGCCATCCCAAAACAGGGTCAGACACTGCCCAGCTTCCCTCCAGGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCTGGGGCCTACACACCGAAAACAAGGCTGAGTAGTCAGAGGCAGCAGGAAGAGAGAATACTTCAACATTaGATCAACAGTAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: AGAYTPKTRLSSQRQQEERILQH*INSRQL
Trigger: CAACTGCCTACTGTTGATCAAATGTTGAAGTATTCT...CTCTTCCTGCTGCCTCTGACTACTCAGCCTTGTTTTCGGTGTGTAGGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTAGAAGGGTCTTCCCGTaGGGTTTCAAGTCTCGGGAT +
Preference number: 5 (lower is better)
Translates to: RATVLPGTSLLSITLTGCRRVFP*GFKSRD
Trigger: ATCCCGAGACTTGAAACCCAACGGGAAGACCCTTCT...ACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449784.5
ENST00000452375.5
CDS GCA 90 bp ATACTGGATAAAAGGAGCCAAGGATATTCTCTCAATCTCTCCCTCTaGCCCACCAATTCCCATCTGTCTCACAATAGGGTACCTCACAGG +
Preference number: 5 (lower is better)
Translates to: ILDKRSQGYSLNLSL*PTNSHLSHNRVPHR
Trigger: CCTGTGAGGTACCCTATTGTGAGACAGATGGGAATTGGTGGGGCAGAGGGAGAGATTGAGAGAATATCCTTGGCTCCTTTTATCCAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479430.5
ENST00000492423.5
CDS-3UTR CAA 90 bp GAAGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGCTCCAGGAGATTACTaGAGGGTTTCTGTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: EEKRKSHCSAWNFSAVNYAPGDY*RVSVPL
Trigger: CAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAGC...GTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CAA 90 bp TCATGCAGGGTCTTGACAATATTATTGATATCCTTCTTTCGGATGTCACGGCCATTTCGCTGGTCCAGCTaGCCCTGGATGATGTCAGTG +
Preference number: 5 (lower is better)
Translates to: SCRVLTILLISFFRMSRPFRWSS*PWMMSV
Trigger: CACTGACATCATCCAGGGCAAGCTGGACCAGCGAAA...TGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412922.6
ENST00000413197.5
ENST00000449784.5
CDS-3UTR CAA 90 bp AAACAGCATCACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCGCTTTGAGTGTCTTCTaGATGTTGGTAACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: KQHHIFLNHPNPSPSRSTALSVF*MLVTSA
Trigger: AGCAGAGGTTACCAACATCAAGAAGACACTCAAAGC...GGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTGATGCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350033.8
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TTAAGTCTTTTTCTCTTGCCAGGAGAATGCCATCATCAGAGGGCTCTGGGTCATACCAGACCTTTCACTTaGGACATCTTCTTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: LSLFLLPGECHHQRALGHTRPFT*DIFLVG
Trigger: GCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGGT...ATGACCCAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TTCACAATCATCCCTGGGGGCTGGTTAAAGCTGCCTCCGGCTTATAACCAGCCTTTAAGTCTTTTTCTCTaGCCAGGAGAATGCCATCAT +
Preference number: 5 (lower is better)
Translates to: FTIIPGGWLKLPPAYNQPLSLFL*PGECHH
Trigger: ATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA...AGGCTGGTTATAAGCCGGAGGCAGCTTTAACCAGCCCCCAGGGATGATTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AAGAGGCTGAAAACCCGTGGGTTTAGTAAACACAGCCCAGCATCACGTCCCTCCTTAAGTCTTTTTCTCTaGCCAGGAGAATGCCATCAT +
Preference number: 5 (lower is better)
Translates to: KRLKTRGFSKHSPASRPSLSLFL*PGECHH
Trigger: ATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA...GGAGGGACGTGATGCTGGGCTGTGTTTACTAAACCCACGGGTTTTCAGCCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000410017.5
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp ACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTGCTCCAGGAGATTACTaGAGGGTTTCTGTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: TVLPGTSLLSITLTGCCCAPGDY*RVSVPL
Trigger: CAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAGC...ACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CAA 90 bp AGCAGCATTAGCTCCTTCCGCAAGTCTTCACTGATGCTGATGGCAAAAAGCCATGAGCCACTGGTACCTTaGGCTAGTAAAATAAACTGC +
Preference number: 5 (lower is better)
Translates to: SSISSFRKSSLMLMAKSHEPLVP*ASKINC
Trigger: GCAGTTTATTTTACTAGCCAAAGGTACCAGTGGCTC...ATGGCTTTTTGCCATCAGCATCAGTGAAGACTTGCGGAAGGAGCTAATGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
CDS-3UTR CAA 90 bp GCTTTTTCCTCAATGAACTTTAATCAGTCCAGGACCTACAAACACACACACACATTTCGCTGGTCCAGCTaGCCCTGGATGATGTCAGTG +
Preference number: 5 (lower is better)
Translates to: AFSSMNFNQSRTYKHTHTFRWSS*PWMMSV
Trigger: CACTGACATCATCCAGGGCAAGCTGGACCAGCGAAA...TGTGTGTGTGTGTTTGTAGGTCCTGGACTGATTAAAGTTCATTGAGGAAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CTCCACTTGGGCATAATGTTATGTGGGCACATGGATTGGCTTAAAAGGGAAACACGGTTGTGGTTCTCTTaGTACTGGTTGGCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: LHLGIMLCGHMDWLKRETRLWFS*YWLALR
Trigger: TCTGAGAGCCAACCAGTACAAAGAGAACCACAACCG...TGTTTCCCTTTTAAGCCAATCCATGTGCCCACATAACATTATGCCCAAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CACATTTTCCTGAACCACCCTAATCCCAGCCCCTCAAGATCCACCAGGTATGCATTAAGTCTTTTTCTCTaGCCAGGAGAATGCCATCAT +
Preference number: 5 (lower is better)
Translates to: HIFLNHPNPSPSRSTRYALSLFL*PGECHH
Trigger: ATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA...TGCATACCTGGTGGATCTTGAGGGGCTGGGATTAGGGTGGTTCAGGAAAATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp CTCAGATACCAGAGGTTAGTCAACCCAGCGCTCTCAACTAATTGGAGATCGGAGGGAGAAATCCATTTTTaGACCATGGCTAAACATGGG +
Preference number: 5 (lower is better)
Translates to: LRYQRLVNPALSTNWRSEGEIHF*TMAKHG
Trigger: CCCATGTTTAGCCATGGTCAAAAAATGGATTTCTCC...CTCCGATCTCCAATTAGTTGAGAGCGCTGGGTTGACTAACCTCTGGTATCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTACGTTAACTGGTTGGAGCCACTGGTACCTTaGGCTAGTAAAATAAACTGC +
Preference number: 5 (lower is better)
Translates to: KSHCSAWNFSAVNYVNWLEPLVP*ASKINC
Trigger: GCAGTTTATTTTACTAGCCAAAGGTACCAGTGGCTC...CAACCAGTTAACGTAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CAA 90 bp CTCCACTTGGGCATAATGTTATGTGGGCACATGGATTGGCTTAAAAGGGAAACATTCTCTTTGTACTGGTaGGCTCTCAGAACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: LHLGIMLCGHMDWLKRETFSLYW*ALRTCC
Trigger: GCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAA...TGTTTCCCTTTTAAGCCAATCCATGTGCCCACATAACATTATGCCCAAGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp TTAAGTCTTTTTCTCTTGCCAGGAGAATGCCATCATCAGAGGGCTCTGGGTCATAGTGTCTTCTTGATGTaGGTAACCTCTGCTTCTACC +
Preference number: 5 (lower is better)
Translates to: LSLFLLPGECHHQRALGHSVFLM*VTSAST
Trigger: GGTAGAAGCAGAGGTTACCAACATCAAGAAGACACT...ATGACCCAGAGCCCTCTGATGATGGCATTCTCCTGGCAAGAGAAAAAGACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000412922.6
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp AAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGGAGTGTCTTCTTGATGTaGGTAACCAGAAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: KRKTGRETSPYTETRTSWSVFLM*VTRRKL
Trigger: CAGCTTTCTTCTGGTTACCAACATCAAGAAGACACT...CCAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373608.7
ENST00000410017.5
CDS-3UTR CAA 90 bp ACTTCTCTGCTGTCAATTACGTTAACTGGTTGTTGTTGTTGTTGTTGTTGTTTACCTGGCTCCTGCACGTaGGCCAGCTCCAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: TSLLSITLTGCCCCCCCLPGSCT*ASSRSS
Trigger: AGAACTTCTGGAGCTGGCCAACGTGCAGGAGCCAGG...TAAACAACAACAACAACAACAACAACCAGTTAACGTAATTGACAGCAGAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432387.5
CDS-3UTR CAA 90 bp AGAAGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTAGGATACACTTCATTCTaGATGCCAAGCTCACGATGG +
Preference number: 5 (lower is better)
Translates to: RRKTKEPLFCLELLCCQLGYTSF*MPSSRW
Trigger: CCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCC...TAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449784.5
CDS-3UTR CAA 90 bp ACTTTGGAAATTAAAGTGAACTCTCCACTTGGGCATAATGTTATGTGGGCACATACTTTGGACATCTTCTaGGTGGGCTGCCTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: TLEIKVNSPLGHNVMWAHTLDIF*VGCLCS
Trigger: TGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAGT...ATGTGCCCACATAACATTATGCCCAAGTGGAGAGTTCACTTTAATTTCCAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS-3UTR CAA 90 bp GCTTTTTCCTCAATGAACTTTAATCAGTCCAGGACCTACAAACACACACACACAACCAGACCTTTCACTTaGGACATCTTCTTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: AFSSMNFNQSRTYKHTHTTRPFT*DIFLVG
Trigger: GCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGGT...TGTGTGTGTGTGTTTGTAGGTCCTGGACTGATTAAAGTTCATTGAGGAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS CCA 90 bp GTGTCCCTGACCAATCTTCCTTATCGATATTGCACTGGAGGTTTCTaGTCCTTAAGAATGCATGAATCTACTCCTATTAAACAGCCCATG +
Preference number: 5 (lower is better)
Translates to: VSLTNLPYRYCTGGF*SLRMHESTPIKQPM
Trigger: CATGGGCTGTTTAATAGGAGTAGATTCATGCATTCTTAAGGACCAGAAACCTCCAGTGCAATATCGATAAGGAAGATTGGTCAGGGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492423.5
CDS-3UTR CAA 90 bp AGAAGAAAAACGAAAGAGCCACTGTTCTGCCTGGAACTTCTCTGCTGTCAATTAGAGCCACTGGTACCTTaGGCTAGTAAAATAAACTGC +
Preference number: 5 (lower is better)
Translates to: RRKTKEPLFCLELLCCQLEPLVP*ASKINC
Trigger: GCAGTTTATTTTACTAGCCAAAGGTACCAGTGGCTC...TAATTGACAGCAGAGAAGTTCCAGGCAGAACAGTGGCTCTTTCGTTTTTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CAA 90 bp GATGCTGATGGCAAAAAGCCATGTGTAGAAGAAAAACGAAAGAGCCACTGTTCTGAGCCACTGGTACCTTaGGCTAGTAAAATAAACTGC +
Preference number: 5 (lower is better)
Translates to: DADGKKPCVEEKRKSHCSEPLVP*ASKINC
Trigger: GCAGTTTATTTTACTAGCCAAAGGTACCAGTGGCTC...AGAACAGTGGCTCTTTCGTTTTTCTTCTACACATGGCTTTTTGCCATCAGCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000357490.6
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
CDS-3UTR CAA 90 bp CAAAAGAAAAACTGGGAGGGAGACAAGCCCTTACACAGAGACAAGAACCTCCTGAGAATACTTCAACATTaGATCAACAGTAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: QKKNWEGDKPLHRDKNLLRILQH*INSRQL
Trigger: CAACTGCCTACTGTTGATCAAATGTTGAAGTATTCT...CAGGAGGTTCTTGTCTCTGTGTAAGGGCTTGTCTCCCTCCCAGTTTTTCTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350033.8
ENST00000373608.7
ENST00000413197.5
ENST00000611614.4
ENST00000620578.4
CDS CCA 90 bp AACACAAGTCTTTTGAAGGATCTTCACCAACTCACCTATGTAATCTaGGTATGTCCCATAGGCAAACAGGTTCAACAACTGCAAATAAGC +
Preference number: 5 (lower is better)
Translates to: NTSLLKDLHQLTYVI*VCPIGKQVQQLQIS
Trigger: GCTTATTTGCAGTTGTTGAACCTGTTTGCCTATGGGACATACCCAGATTACATAGGTGAGTTGGTGAAGATCCTTCAAAAGACTTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466901.5
CDS GCA 90 bp TCAATTAAATTAAACATATCTTCATCGAGCATCTGTTGTGTGCAATaGTCTGTACTGAGAAGAATCAAGGATGAACAAGATGGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: SIKLNISSSSICCVQ*SVLRRIKDEQDGLC
Trigger: GCAAAGCCCATCTTGTTCATCCTTGATTCTTCTCAGTACAGAGCATTGCACACAACAGATGCTCGATGAAGATATGTTTAATTTAATTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488111.1
CDS TCA 72 bp CCTCCCGGCGCCTGCCCGCAGGTTGTCAAGCGTCCATaGTCACCCCGGCGTCCGGCGCTTTTCTGTCTCCGC +
Preference number: 6 (lower is better)
Translates to: PPGACPQVVKRP*SPRRPALFCLR
Trigger: GCGGAGACAGAAAAGCGCCGGACGCCGGGGTGATCATGGACGCTTGACAACCTGCGGGCAGGCGCCGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620578.4
CDS CAA 90 bp GGTCCTCTTAGTCGCTGGCTCGGCCTCCCGGCGCCTGCCCGCAGGTaGTCAAGCGTCCATGATCACCCCGGCGTCCGGCGCTTTTCTGTC +
Preference number: 6 (lower is better)
Translates to: GPLSRWLGLPAPARR*SSVHDHPGVRRFSV
Trigger: GACAGAAAAGCGCCGGACGCCGGGGTGATCATGGACGCTTGACAACCTGCGGGCAGGCGCCGGGAGGCCGAGCCAGCGACTAAGAGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620578.4
CDS CCA 72 bp AATCTGTCCACGCCACCTCTCGGTCCTCTTAGTCGCTaGCTCGGCCTCCCGGCGCCTGCCCGCAGGTTGTCA +
Preference number: 6 (lower is better)
Translates to: NLSTPPLGPLSR*LGLPAPARRLS
Trigger: TGACAACCTGCGGGCAGGCGCCGGGAGGCCGAGCCAGCGACTAAGAGGACCGAGAGGTGGCGTGGACAGATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000350033.8
ENST00000357490.6
ENST00000373608.7
ENST00000410017.5
ENST00000412591.5
ENST00000412922.6
ENST00000413197.5
ENST00000432387.5
ENST00000450501.5
ENST00000492423.5
ENST00000620578.4
CDS TCA 72 bp GGGATTCCGAAACGACCAACTCAGCGGGCGGGTTTGTaGATTTGCGCACACTGCGCGGCACACTGGAGTCTA +
Preference number: 6 (lower is better)
Translates to: GIPKRPTQRAGL*ICAHCAAHWSL
Trigger: TAGACTCCAGTGTGCCGCGCAGTGTGCGCAAATTCACAAACCCGCCCGCTGAGTTGGTCGTTTCGGAATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409091.5
ENST00000409295.5
ENST00000410024.5
ENST00000611614.4
CDS TCA 72 bp GAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTaGAACCCCGTCTCTCCTGCACGTTGGCCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSWLTR*NPVSPARWPAP
Trigger: TGGAGCTGGCCAACGTGCAGGAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452375.5
CDS GCA 72 bp TGGCACAACTCCAGGGCCACCAACCACCTGGAGGTGTaGAACTTCATGGCCCTGGACTTGTCCTCGGTCTTA +
Preference number: 6 (lower is better)
Translates to: WHNSRATNHLEV*NFMALDLSSVL
Trigger: TAAGACCGAGGACAAGTCCAGGGCCATGAAGTTGCACACCTCCAGGTGGTTGGTGGCCCTGGAGTTGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488111.1
CDS TCA 72 bp GAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTaGAACCCCGTCTCTACTCCTGCACGTTGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSWLTR*NPVSTPARWPA
Trigger: AGCTGGCCAACGTGCAGGAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357490.6
ENST00000449784.5
CDS CCA 72 bp CCAGGGCCACCAACCACCTGGAGGTGTGCAACTTCATaGCCCTGGACTTGTCCTCGGTCTTACAATCAGATG +
Preference number: 6 (lower is better)
Translates to: PGPPTTWRCATS*PWTCPRSYNQM
Trigger: CATCTGATTGTAAGACCGAGGACAAGTCCAGGGCCATGAAGTTGCACACCTCCAGGTGGTTGGTGGCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488111.1
CDS CAA 90 bp TCTCGGGATTCCGAAACGACCAACTCAGCGGGCGGGTTTGTGAATTaGCGCACACTGCGCGGCACACTGGAGTCTAAGTTACAGAGGAAC +
Preference number: 6 (lower is better)
Translates to: SRDSETTNSAGGFVN*RTLRGTLESKLQRN
Trigger: GTTCCTCTGTAACTTAGACTCCAGTGTGCCGCGCAGTGTGCGCAAATTCACAAACCCGCCCGCTGAGTTGGTCGTTTCGGAATCCCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409091.5
ENST00000409295.5
ENST00000410024.5
ENST00000611614.4
CDS CAA 90 bp TCTGCGGGCTGTCATCTTCTTTTGAGGGTGAGAAGGGTCTTCCCGTaGGGTTTCAAGTCTCGGGATTCCGAAACGACCAACTCAGCGGGC +
Preference number: 6 (lower is better)
Translates to: SAGCHLLLRVRRVFP*GFKSRDSETTNSAG
Trigger: GCCCGCTGAGTTGGTCGTTTCGGAATCCCGAGACTTGAAACCCAACGGGAAGACCCTTCTCACCCTCAAAAGAAGATGACAGCCCGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409091.5
ENST00000409295.5
ENST00000410024.5
ENST00000449784.5
ENST00000452375.5
ENST00000466901.5
ENST00000479430.5
ENST00000611614.4
CDS CAA 72 bp TCCGAAACGACCAACTCAGCGGGCGGGTTTGTGAATTaGCGCACACTGCGCGGCACACTGGAGTCTAAGTTA +
Preference number: 6 (lower is better)
Translates to: SETTNSAGGFVN*RTLRGTLESKL
Trigger: TAACTTAGACTCCAGTGTGCCGCGCAGTGTGCGCAAATTCACAAACCCGCCCGCTGAGTTGGTCGTTTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409091.5
ENST00000409295.5
ENST00000410024.5
ENST00000611614.4
CDS CCA 72 bp TCTCCAAAGACATACACTCCGGGAGCCTCTAAGACCTaGCTTATGAGAGCAGTGAGGGCTGAGCCACTGGTA +
Preference number: 6 (lower is better)
Translates to: SPKTYTPGASKT*LMRAVRAEPLV
Trigger: TACCAGTGGCTCAGCCCTCACTGCTCTCATAAGCCAGGTCTTAGAGGCTCCCGGAGTGTATGTCTTTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000350033.8
ENST00000357490.6
ENST00000373608.7
ENST00000410017.5
ENST00000410024.5
ENST00000412591.5
ENST00000412922.6
ENST00000413197.5
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
ENST00000466901.5
ENST00000479430.5
ENST00000492423.5
ENST00000611614.4
ENST00000620578.4
ENST00000631349.1
CDS GCA 72 bp AGCTGTGCTCAGTTCTGGCAGGCTCTCCTTGTTGGCTaGTCAGTCCCACCCACCACAAAAATCAAGACACAA +
Preference number: 6 (lower is better)
Translates to: SCAQFWQALLVG*SVPPTTKIKTQ
Trigger: TTGTGTCTTGATTTTTGTGGTGGGTGGGACTGAGCAGCCAACAAGGAGAGCCTGCCAGAACTGAGCACAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488111.1
CDS CAA 72 bp CTGGCTAACAAGGTGAAACCCCGTCTCTCCTGCACGTaGGCCAGCTCCAGAAGTTCTCCAAAGACATACACT +
Preference number: 6 (lower is better)
Translates to: LANKVKPRLSCT*ASSRSSPKTYT
Trigger: AGTGTATGTCTTTGGAGAACTTCTGGAGCTGGCCAACGTGCAGGAGAGACGGGGTTTCACCTTGTTAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452375.5
CDS CAA 90 bp AGGGCCACCAACCACCTGGAGGTGTGCAACTTCATGGCCCTGGACTaGTCCTCGGTCTTACAATCAGATGTTTCCATAGCTACAAATCCA +
Preference number: 6 (lower is better)
Translates to: RATNHLEVCNFMALD*SSVLQSDVSIATNP
Trigger: TGGATTTGTAGCTATGGAAACATCTGATTGTAAGACCGAGGACAAGTCCAGGGCCATGAAGTTGCACACCTCCAGGTGGTTGGTGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488111.1
CDS CAA 72 bp GCTAACAAGGTGAAACCCCGTCTCTACTCCTGCACGTaGGCCAGCTCCAGAAGTTCTCCAAAGACATACACT +
Preference number: 6 (lower is better)
Translates to: ANKVKPRLYSCT*ASSRSSPKTYT
Trigger: AGTGTATGTCTTTGGAGAACTTCTGGAGCTGGCCAACGTGCAGGAGTAGAGACGGGGTTTCACCTTGTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357490.6
ENST00000449784.5
CDS TCA 72 bp TTGTGTGCAATGCTCTGTACTGAGAAGAATCAAGGATaGACAAGATGGGCTTTGCCAGGGCTGCTGCATGGC +
Preference number: 6 (lower is better)
Translates to: LCAMLCTEKNQG*TRWALPGLLHG
Trigger: GCCATGCAGCAGCCCTGGCAAAGCCCATCTTGTTCATCCTTGATTCTTCTCAGTACAGAGCATTGCACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488111.1
CDS CAA 72 bp AACCACCTGGAGGTGTGCAACTTCATGGCCCTGGACTaGTCCTCGGTCTTACAATCAGATGTTTCCATAGCT +
Preference number: 6 (lower is better)
Translates to: NHLEVCNFMALD*SSVLQSDVSIA
Trigger: AGCTATGGAAACATCTGATTGTAAGACCGAGGACAAGTCCAGGGCCATGAAGTTGCACACCTCCAGGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488111.1
CDS TCA 72 bp ACATCACGTTTTTCCCTCTCTGCTTCTACCTGCTGCTaGGTTCGGTTGTGGTTCTCTTTGTACTGGTTGGCT +
Preference number: 6 (lower is better)
Translates to: TSRFSLSASTCC*VRLWFSLYWLA
Trigger: AGCCAACCAGTACAAAGAGAACCACAACCGAACTCAGCAGCAGGTAGAAGCAGAGAGGGAAAAACGTGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373608.7
CDS CAA 90 bp AAGACCTGGCTTATGAGAGCAGTGAGGGCTGAGCCACTGGTACCTTaGGCTAGTAAAATAAACTGCTCCAGGAGATTACTTGAGGGTTTC +
Preference number: 6 (lower is better)
Translates to: KTWLMRAVRAEPLVP*ASKINCSRRLLEGF
Trigger: GAAACCCTCAAGTAATCTCCTGGAGCAGTTTATTTTACTAGCCAAAGGTACCAGTGGCTCAGCCCTCACTGCTCTCATAAGCCAGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000350033.8
ENST00000357490.6
ENST00000373608.7
ENST00000410017.5
ENST00000410024.5
ENST00000412591.5
ENST00000412922.6
ENST00000413197.5
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
ENST00000466901.5
ENST00000479430.5
ENST00000492423.5
ENST00000611614.4
ENST00000620578.4
ENST00000631349.1
CDS CAA 90 bp AGAATAAAGAGAAATTGTTTGCAAACCGTTCTTACCTCCTGCACGTaGGCCAGCTCCAGAAGTTCTCCAAAGACATACACTCCGGGAGCC +
Preference number: 6 (lower is better)
Translates to: RIKRNCLQTVLTSCT*ASSRSSPKTYTPGA
Trigger: GGCTCCCGGAGTGTATGTCTTTGGAGAACTTCTGGAGCTGGCCAACGTGCAGGAGGTAAGAACGGTTTGCAAACAATTTCTCTTTATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479430.5
ENST00000492423.5
CDS GCA 72 bp GCTGAGCCACTGGTACCTTTGGCTAGTAAAATAAACTaGTCCAGGAGATTACTTGAGGGTTTCTGTTCCCCT +
Preference number: 6 (lower is better)
Translates to: AEPLVPLASKIN*SRRLLEGFCSP
Trigger: AGGGGAACAGAAACCCTCAAGTAATCTCCTGGAGCAGTTTATTTTACTAGCCAAAGGTACCAGTGGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000350033.8
ENST00000357490.6
ENST00000373608.7
ENST00000410017.5
ENST00000410024.5
ENST00000412591.5
ENST00000412922.6
ENST00000413197.5
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
ENST00000466901.5
ENST00000479430.5
ENST00000492423.5
ENST00000611614.4
ENST00000620578.4
ENST00000631349.1
CDS CCA 72 bp GAAATTGTTTGCAAACCGTTCTTACCTCCTGCACGTTaGCCAGCTCCAGAAGTTCTCCAAAGACATACACTC +
Preference number: 6 (lower is better)
Translates to: EIVCKPFLPPAR*PAPEVLQRHTL
Trigger: GAGTGTATGTCTTTGGAGAACTTCTGGAGCTGGCCAACGTGCAGGAGGTAAGAACGGTTTGCAAACAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479430.5
ENST00000492423.5
CDS CAA 72 bp CTTATGAGAGCAGTGAGGGCTGAGCCACTGGTACCTTaGGCTAGTAAAATAAACTGCTCCAGGAGATTACTT +
Preference number: 6 (lower is better)
Translates to: LMRAVRAEPLVP*ASKINCSRRLL
Trigger: AAGTAATCTCCTGGAGCAGTTTATTTTACTAGCCAAAGGTACCAGTGGCTCAGCCCTCACTGCTCTCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000350033.8
ENST00000357490.6
ENST00000373608.7
ENST00000410017.5
ENST00000410024.5
ENST00000412591.5
ENST00000412922.6
ENST00000413197.5
ENST00000432387.5
ENST00000449784.5
ENST00000450501.5
ENST00000452375.5
ENST00000466901.5
ENST00000479430.5
ENST00000492423.5
ENST00000611614.4
ENST00000620578.4
ENST00000631349.1
CDS CAA 72 bp AGAAATTGTTTGCAAACCGTTCTTACCTCCTGCACGTaGGCCAGCTCCAGAAGTTCTCCAAAGACATACACT +
Preference number: 6 (lower is better)
Translates to: RNCLQTVLTSCT*ASSRSSPKTYT
Trigger: AGTGTATGTCTTTGGAGAACTTCTGGAGCTGGCCAACGTGCAGGAGGTAAGAACGGTTTGCAAACAATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479430.5
ENST00000492423.5
CDS CCA 72 bp CTTATTCTCAGCTCACATATGGAAAAACGCAATGTATaGGGAGATAAAGGTGGTCTGCTAAGCACCCTATGG +
Preference number: 6 (lower is better)
Translates to: LILSSHMEKRNV*GDKGGLLSTLW
Trigger: CCATAGGGTGCTTAGCAGACCACCTTTATCTCCCCATACATTGCGTTTTTCCATATGTGAGCTGAGAATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461350.5
CDS CAA 72 bp CTCTTAGCCAATCTTCCACAGTTACAAAACAACTACTaGGCATATTCATGCAGGCTGTTCATGAACCTGAAG +
Preference number: 6 (lower is better)
Translates to: LLANLPQLQNNY*AYSCRLFMNLK
Trigger: CTTCAGGTTCATGAACAGCCTGCATGAATATGCCAAGTAGTTGTTTTGTAACTGTGGAAGATTGGCTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461350.5
CDS CAA 90 bp ATCCATCTCCTCTTAGCCAATCTTCCACAGTTACAAAACAACTACTaGGCATATTCATGCAGGCTGTTCATGAACCTGAAGGAACATATT +
Preference number: 6 (lower is better)
Translates to: IHLLLANLPQLQNNY*AYSCRLFMNLKEHI
Trigger: AATATGTTCCTTCAGGTTCATGAACAGCCTGCATGAATATGCCAAGTAGTTGTTTTGTAACTGTGGAAGATTGGCTAAGAGGAGATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461350.5
CDS GCA 72 bp CTTCCACAGTTACAAAACAACTACTTGGCATATTCATaGAGGCTGTTCATGAACCTGAAGGAACATATTACC +
Preference number: 6 (lower is better)
Translates to: LPQLQNNYLAYS*RLFMNLKEHIT
Trigger: GGTAATATGTTCCTTCAGGTTCATGAACAGCCTGCATGAATATGCCAAGTAGTTGTTTTGTAACTGTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461350.5
CDS GCA 72 bp TTCATGTCCATCTTATGTTCAATAGCAGTATGTTTCTaGTGTGTGTCCCTGACCAATCTTCCTTATCGATAT +
Preference number: 6 (lower is better)
Translates to: FMSILCSIAVCF*CVSLTNLPYRY
Trigger: ATATCGATAAGGAAGATTGGTCAGGGACACACAGCAGAAACATACTGCTATTGAACATAAGATGGACATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492423.5
CDS CCA 72 bp AGGCTGTTCATGAACCTGAAGGAACATATTACCCCTTaGTCATCTCTTGTGTTGAAAAATGAACTCAGTTTT +
Preference number: 6 (lower is better)
Translates to: RLFMNLKEHITP*SSLVLKNELSF
Trigger: AAAACTGAGTTCATTTTTCAACACAAGAGATGACCAAGGGGTAATATGTTCCTTCAGGTTCATGAACAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461350.5
CDS CCA 72 bp CTCACAGGTTCACAATACTTCAGCACTGAAATTCTTTaGAAACCTGGAGAATTACAGAGTCTTAGAATAAAG +
Preference number: 6 (lower is better)
Translates to: LTGSQYFSTEIL*KPGELQSLRIK
Trigger: CTTTATTCTAAGACTCTGTAATTCTCCAGGTTTCCAAAGAATTTCAGTGCTGAAGTATTGTGAACCTGTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479430.5
ENST00000492423.5
CDS CCA 72 bp ACCAATCTTCCTTATCGATATTGCACTGGAGGTTTCTaGTCCTTAAGAATGCATGAATCTACTCCTATTAAA +
Preference number: 6 (lower is better)
Translates to: TNLPYRYCTGGF*SLRMHESTPIK
Trigger: TTTAATAGGAGTAGATTCATGCATTCTTAAGGACCAGAAACCTCCAGTGCAATATCGATAAGGAAGATTGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492423.5